Information for motif22


Reverse Opposite:

p-value:1e-12
log p-value:-2.953e+01
Information Content per bp:1.629
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif5.99%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets23.9 +/- 13.3bp
Average Position of motif in Background18.6 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0461.1_Atoh1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGATCGC
CAGATGGC

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGATCGC
AACAGATGGC

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTGATCGC
GCTGTG---

POL002.1_INR/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGATCGC
NNNANTGA----

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGATCGC-----
TNNNATGATTTCNNCNN

MA0060.2_NFYA/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CTGATCGC----
AGAGTGCTGATTGGTCCA

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGATCGC-
GTTAATGGCC

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGATCGC
CTGTTTAC

MA0502.1_NFYB/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGATCGC-------
CTGATTGGTCNATTT

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTGATCGC
NCCTTATCTG