Information for motif4


Reverse Opposite:

p-value:1e-53
log p-value:-1.225e+02
Information Content per bp:1.793
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif16.20%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets27.4 +/- 14.1bp
Average Position of motif in Background21.8 +/- 2.6bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0095.1_Zfp161_1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGCTCGCA-----
TGGCGCGCGCGCCTGA

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CGCTCGCA----
GGGCCGTGTGCAAAAA

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGCTCGCA-
TBGCACGCAA

MA0131.1_HINFP/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGCTCGCA
TAACGTCCGC-

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGCTCGCA-----
NTCGCGCGCCTTNNN

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGCTCGCA-----
ANCGCGCGCCCTTNN

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGCTCGCA
--CACGCA

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CGCTCGCA-----
TCGTACCCGCATCATT

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CGCTCGCA----
NGTAGGTTGGCATNNN

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CGCTCGCA--
TCCGCCCCCGCATT