Information for motif6


Reverse Opposite:

p-value:1e-44
log p-value:-1.034e+02
Information Content per bp:1.391
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif11.97%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets23.4 +/- 12.4bp
Average Position of motif in Background37.9 +/- 2.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0147.1_Max_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---SCAAGCGGCS-
GTGCCACGCGACTG

MA0104.3_Mycn/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:SCAAGCGGCS
-CACGTGGC-

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---SCAAGCGGCS--
ANTGCCTGAGGCAAN

n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:SCAAGCGGCS
CCACGTGGNN

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---SCAAGCGGCS--
ATTCCCTGAGGGGAA

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---SCAAGCGGCS--
ATTGCCTGAGGCAAT

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:SCAAGCGGCS
-CACGCA---

c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:SCAAGCGGCS
-CACGTGGN-

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--SCAAGCGGCS-----
NNNAAGGGGGCGGGNNN

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---SCAAGCGGCS--
ATTGCCTGAGGCGAA