Information for motif7


Reverse Opposite:

p-value:1e-38
log p-value:-8.757e+01
Information Content per bp:1.683
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif10.56%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets24.0 +/- 13.1bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0162.2_EGR1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGGCGGCGGCRG---
-GGCGGGGGCGGGGG

PB0010.1_Egr1_1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGCGGCGGCRG-
ANTGCGGGGGCGGN

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGGCGGCGGCRG-
ATTGCCTCAGGCAAT

MA0516.1_SP2/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGCGGCGGCRG---
GGGNGGGGGCGGGGC

MA0079.3_SP1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGGCGGCGGCRG
-GGGGGCGGGGC

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGGCGGCRG---
NAGANTGGCGGGGNGNA

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGGCGGCRG
GGGGGCGGGGCC--

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGGCGGCRG-
NNNAAGGGGGCGGGNNN

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGGCGGCGGCRG
AGGGGGCGGGGCTG-

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGGCGGCGGCRG
CAAGATGGCGGC--