Homer Known Motif Enrichment Results (Motifs_3)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 4368, Total Background Sequences = 3517
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-981-2.259e+030.00001860.042.58%231.46.58%motif file (matrix) pdf
2Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-934-2.152e+030.00001909.043.70%263.67.50%motif file (matrix) pdf
3AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-848-1.954e+030.00001926.044.09%302.88.61%motif file (matrix) pdf
4Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-719-1.658e+030.00001017.023.28%72.52.06%motif file (matrix) pdf
5Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-267-6.171e+020.0000582.013.32%74.52.12%motif file (matrix) pdf
6TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-154-3.568e+020.00001086.024.86%374.910.66%motif file (matrix) pdf
7TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-149-3.435e+020.00001007.023.05%338.19.61%motif file (matrix) pdf
8Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer1e-124-2.862e+020.0000194.04.44%15.60.44%motif file (matrix) pdf
9NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer1e-99-2.280e+020.0000194.04.44%22.00.62%motif file (matrix) pdf
10MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer1e-94-2.181e+020.0000375.08.59%85.82.44%motif file (matrix) pdf
11Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer1e-88-2.036e+020.0000149.03.41%13.80.39%motif file (matrix) pdf
12CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer1e-68-1.584e+020.0000222.05.08%42.81.22%motif file (matrix) pdf
13BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer1e-68-1.575e+020.0000248.05.68%52.11.48%motif file (matrix) pdf
14RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer1e-62-1.445e+020.0000662.015.16%267.97.62%motif file (matrix) pdf
15RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer1e-58-1.348e+020.0000898.020.56%419.511.93%motif file (matrix) pdf
16FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-56-1.308e+020.00001194.027.34%618.417.59%motif file (matrix) pdf
17RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer1e-56-1.290e+020.0000766.017.54%342.79.75%motif file (matrix) pdf
18FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer1e-48-1.128e+020.0000997.022.83%507.814.44%motif file (matrix) pdf
19RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer1e-48-1.126e+020.0000688.015.75%309.78.81%motif file (matrix) pdf
20Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-45-1.036e+020.0000940.021.52%480.713.67%motif file (matrix) pdf
21MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-42-9.788e+010.0000705.016.14%334.79.52%motif file (matrix) pdf
22FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer1e-41-9.576e+010.0000531.012.16%229.66.53%motif file (matrix) pdf
23c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-37-8.633e+010.0000305.06.98%108.53.08%motif file (matrix) pdf
24Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer1e-29-6.678e+010.00001520.034.80%951.027.04%motif file (matrix) pdf
25ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-28-6.632e+010.0000748.017.12%400.611.39%motif file (matrix) pdf
26Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer1e-27-6.249e+010.0000870.019.92%489.713.93%motif file (matrix) pdf
27ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-26-6.071e+010.00001108.025.37%660.118.77%motif file (matrix) pdf
28Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-25-5.915e+010.0000740.016.94%405.511.53%motif file (matrix) pdf
29Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-25-5.766e+010.0000526.012.04%265.77.56%motif file (matrix) pdf
30Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-22-5.185e+010.0000678.015.52%374.910.66%motif file (matrix) pdf
31Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer1e-22-5.122e+010.0000498.011.40%255.47.26%motif file (matrix) pdf
32Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer1e-21-4.893e+010.0000536.012.27%283.88.07%motif file (matrix) pdf
33MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-20-4.614e+010.0000551.012.61%298.08.47%motif file (matrix) pdf
34Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer1e-19-4.553e+010.0000794.018.18%465.413.23%motif file (matrix) pdf
35ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-19-4.444e+010.0000873.019.99%523.814.90%motif file (matrix) pdf
36EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer1e-17-4.043e+010.0000604.013.83%342.79.75%motif file (matrix) pdf
37Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-17-3.949e+010.0000287.06.57%135.43.85%motif file (matrix) pdf
38MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-16-3.912e+010.0000710.016.25%418.911.91%motif file (matrix) pdf
39Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-16-3.861e+010.0000737.016.87%438.312.47%motif file (matrix) pdf
40GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer1e-16-3.811e+010.0000572.013.10%324.49.22%motif file (matrix) pdf
41NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer1e-15-3.661e+010.0000309.07.07%152.84.35%motif file (matrix) pdf
42Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-15-3.636e+010.0000299.06.85%146.54.17%motif file (matrix) pdf
43Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer1e-15-3.591e+010.0000279.06.39%134.93.84%motif file (matrix) pdf
44Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer1e-15-3.583e+010.0000435.09.96%236.06.71%motif file (matrix) pdf
45SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-15-3.556e+010.00002645.060.55%1916.654.51%motif file (matrix) pdf
46CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer1e-15-3.455e+010.0000573.013.12%331.29.42%motif file (matrix) pdf
47Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer1e-14-3.408e+010.0000227.05.20%104.52.97%motif file (matrix) pdf
48EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer1e-14-3.346e+010.0000389.08.91%208.45.93%motif file (matrix) pdf
49NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer1e-14-3.335e+010.0000577.013.21%336.49.57%motif file (matrix) pdf
50EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer1e-14-3.327e+010.0000884.020.24%555.515.80%motif file (matrix) pdf
51Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer1e-14-3.314e+010.0000245.05.61%116.83.32%motif file (matrix) pdf
52Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer1e-14-3.280e+010.0000386.08.84%207.35.90%motif file (matrix) pdf
53SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer1e-14-3.225e+010.0000682.015.61%412.611.73%motif file (matrix) pdf
54Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-13-3.141e+010.0000206.04.72%94.62.69%motif file (matrix) pdf
55PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-13-3.067e+010.0000354.08.10%189.75.39%motif file (matrix) pdf
56Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer1e-12-2.892e+010.0000344.07.88%185.05.26%motif file (matrix) pdf
57Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer1e-12-2.874e+010.00001289.029.51%869.724.73%motif file (matrix) pdf
58NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer1e-11-2.685e+010.000073.01.67%23.30.66%motif file (matrix) pdf
59Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-11-2.638e+010.0000279.06.39%146.24.16%motif file (matrix) pdf
60ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer1e-11-2.622e+010.0000494.011.31%292.98.33%motif file (matrix) pdf
61CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-11-2.538e+010.0000634.014.51%393.911.20%motif file (matrix) pdf
62Sp1(Zf)/Promoter/Homer1e-10-2.403e+010.000068.01.56%22.20.63%motif file (matrix) pdf
63Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-9-2.235e+010.0000947.021.68%631.617.96%motif file (matrix) pdf
64Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-9-2.172e+010.0000931.021.31%621.217.67%motif file (matrix) pdf
65Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer1e-9-2.155e+010.0000785.017.97%513.414.60%motif file (matrix) pdf
66NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-9-2.129e+010.000057.01.30%18.70.53%motif file (matrix) pdf
67JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-8-1.984e+010.000091.02.08%37.41.06%motif file (matrix) pdf
68Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer1e-8-1.954e+010.0000162.03.71%80.92.30%motif file (matrix) pdf
69Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer1e-8-1.845e+010.0000467.010.69%290.68.26%motif file (matrix) pdf
70IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer1e-7-1.833e+010.000080.01.83%32.90.94%motif file (matrix) pdf
71Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer1e-7-1.831e+010.0000183.04.19%95.62.72%motif file (matrix) pdf
72ETS(ETS)/Promoter/Homer1e-7-1.802e+010.0000159.03.64%80.12.28%motif file (matrix) pdf
73CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer1e-7-1.802e+010.0000222.05.08%121.13.44%motif file (matrix) pdf
74ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer1e-7-1.782e+010.0000241.05.52%134.43.82%motif file (matrix) pdf
75Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer1e-7-1.751e+010.00001675.038.35%1209.034.38%motif file (matrix) pdf
76Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer1e-7-1.717e+010.0000422.09.66%261.17.42%motif file (matrix) pdf
77AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer1e-7-1.705e+010.0000942.021.57%645.818.37%motif file (matrix) pdf
78AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer1e-7-1.686e+010.00001990.045.56%1461.941.58%motif file (matrix) pdf
79X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-7-1.655e+010.000093.02.13%41.21.17%motif file (matrix) pdf
80NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer1e-7-1.643e+010.00001094.025.05%763.521.71%motif file (matrix) pdf
81CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer1e-7-1.625e+010.000018.00.41%3.80.11%motif file (matrix) pdf
82BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer1e-6-1.511e+010.0000981.022.46%682.819.42%motif file (matrix) pdf
83Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer1e-6-1.439e+010.0000304.06.96%184.55.25%motif file (matrix) pdf
84MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer1e-5-1.380e+010.00001055.024.15%744.021.16%motif file (matrix) pdf
85NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer1e-5-1.379e+010.0000336.07.69%208.45.93%motif file (matrix) pdf
86Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer1e-5-1.361e+010.00001106.025.32%784.622.31%motif file (matrix) pdf
87STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer1e-5-1.309e+010.0000693.015.87%472.313.43%motif file (matrix) pdf
88CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer1e-5-1.294e+010.00001465.033.54%1066.030.32%motif file (matrix) pdf
89Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer1e-5-1.167e+010.00002501.057.26%1899.854.03%motif file (matrix) pdf
90ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer1e-4-1.102e+010.0000911.020.86%646.818.39%motif file (matrix) pdf
91PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer1e-4-1.075e+010.000170.01.60%34.00.97%motif file (matrix) pdf
92Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer1e-4-1.059e+010.0001222.05.08%135.93.86%motif file (matrix) pdf
93STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer1e-4-1.031e+010.0001269.06.16%169.54.82%motif file (matrix) pdf
94STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer1e-4-9.932e+000.0001241.05.52%150.94.29%motif file (matrix) pdf
95Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-4-9.687e+000.0002125.02.86%70.82.01%motif file (matrix) pdf
96PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-4-9.215e+000.0003815.018.66%581.316.53%motif file (matrix) pdf
97LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer1e-3-9.179e+000.000326.00.60%9.60.27%motif file (matrix) pdf
98KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer1e-3-8.860e+000.0004534.012.23%369.410.50%motif file (matrix) pdf
99NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer1e-3-8.773e+000.0004159.03.64%95.42.71%motif file (matrix) pdf
100ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer1e-3-8.478e+000.000561.01.40%30.70.87%motif file (matrix) pdf
101BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer1e-3-7.737e+000.0011986.022.57%721.220.51%motif file (matrix) pdf
102Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer1e-3-7.698e+000.001175.01.72%40.51.15%motif file (matrix) pdf
103RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer1e-3-7.607e+000.001212.00.27%3.70.11%motif file (matrix) pdf
104bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer1e-3-7.592e+000.0012340.07.78%229.26.52%motif file (matrix) pdf
105ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer1e-3-7.501e+000.0013702.016.07%503.914.33%motif file (matrix) pdf
106IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer1e-2-6.753e+000.002798.02.24%57.91.65%motif file (matrix) pdf
107ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer1e-2-6.669e+000.002948.01.10%24.50.70%motif file (matrix) pdf
108GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-2-6.614e+000.0031125.02.86%76.72.18%motif file (matrix) pdf
109Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer1e-2-6.442e+000.00361468.033.61%1108.431.52%motif file (matrix) pdf
110p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer1e-2-6.422e+000.0036168.03.85%107.13.05%motif file (matrix) pdf
111Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer1e-2-6.065e+000.0052693.015.87%504.014.33%motif file (matrix) pdf
112Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer1e-2-6.016e+000.005459.01.35%32.10.91%motif file (matrix) pdf
113E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer1e-2-5.932e+000.0058155.03.55%99.92.84%motif file (matrix) pdf
114Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer1e-2-5.717e+000.0071818.018.73%603.217.15%motif file (matrix) pdf
115CRE(bZIP)/Promoter/Homer1e-2-5.542e+000.0084120.02.75%75.72.15%motif file (matrix) pdf
116EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer1e-2-5.501e+000.00878.00.18%2.70.08%motif file (matrix) pdf
117E-box(HLH)/Promoter/Homer1e-2-5.139e+000.012334.00.78%17.20.49%motif file (matrix) pdf
118PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer1e-2-5.026e+000.0137161.03.69%106.43.02%motif file (matrix) pdf
119NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer1e-2-4.968e+000.014446.01.05%25.40.72%motif file (matrix) pdf
120Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer1e-2-4.962e+000.014474.01.69%44.81.27%motif file (matrix) pdf
121Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer1e-2-4.907e+000.0150283.06.48%197.75.62%motif file (matrix) pdf
122E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer1e-2-4.818e+000.0163102.02.34%64.71.84%motif file (matrix) pdf
123RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer1e-2-4.753e+000.017350.01.14%28.40.81%motif file (matrix) pdf
124Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer1e-2-4.695e+000.01811422.032.55%1086.430.90%motif file (matrix) pdf
125USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer1e-2-4.681e+000.0182223.05.11%153.14.35%motif file (matrix) pdf
126PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer1e-2-4.624e+000.01921343.030.75%1024.429.13%motif file (matrix) pdf