PeakID (cmd=annotatePeaks.pl ../../../../bed/peaks/shared_peaks.txt hg19 -m motif10.motif motif11.motif motif12.motif motif13.motif motif14.motif motif15.motif motif16.motif motif17.motif motif18.motif motif19.motif motif1.motif motif20.motif motif21.motif motif22.motif motif23.motif motif24.motif motif25.motif motif26.motif motif27.motif motif28.motif motif2.motif motif3.motif motif4.motif motif5.motif motif6.motif motif7.motif motif8.motif motif9.motif) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type CpG% GC% 12-TCGCCCTCCTCC,BestGuess:MA0528.1_ZNF263/Jaspar(0.702) Distance From Peak(sequence,strand,conservation) 14-NDVNYCGDNNNN,BestGuess:Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer(0.717) Distance From Peak(sequence,strand,conservation) 13-GGCGGCCGAG,BestGuess:ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer(0.618) Distance From Peak(sequence,strand,conservation) 10-AAGCGGCT,BestGuess:PH0115.1_Nkx2-6/Jaspar(0.701) Distance From Peak(sequence,strand,conservation) 16-CCGCCTTCCCGG,BestGuess:Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer(0.625) Distance From Peak(sequence,strand,conservation) 11-TCGACGCC,BestGuess:PB0113.1_E2F3_2/Jaspar(0.681) Distance From Peak(sequence,strand,conservation) 19-GAGCGCCAGCCC,BestGuess:MA0506.1_NRF1/Jaspar(0.649) Distance From Peak(sequence,strand,conservation) 14-CGCGTACG,BestGuess:PB0094.1_Zfp128_1/Jaspar(0.695) Distance From Peak(sequence,strand,conservation) 15-CCGACCGA,BestGuess:PB0179.1_Sp100_2/Jaspar(0.573) Distance From Peak(sequence,strand,conservation) 20-TCCCGGCCCT,BestGuess:Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer(0.761) Distance From Peak(sequence,strand,conservation) 1-GCCGGGGG,BestGuess:PB0164.1_Smad3_2/Jaspar(0.686) Distance From Peak(sequence,strand,conservation) 17-TCGTGCCG,BestGuess:HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer(0.647) Distance From Peak(sequence,strand,conservation) 20-CGGAAGAAGCGG,BestGuess:MA0062.2_GABPA/Jaspar(0.663) Distance From Peak(sequence,strand,conservation) 19-CGTCGCTA,BestGuess:PB0056.1_Rfxdc2_1/Jaspar(0.743) Distance From Peak(sequence,strand,conservation) 21-CCCTCTCAGCCC,BestGuess:Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer(0.629) Distance From Peak(sequence,strand,conservation) 20-CGTCGGAC,BestGuess:PB0179.1_Sp100_2/Jaspar(0.614) Distance From Peak(sequence,strand,conservation) 21-CAAAACCG,BestGuess:MF0009.1_TRP(MYB)_class/Jaspar(0.681) Distance From Peak(sequence,strand,conservation) 22-CGGGTAAA,BestGuess:PB0153.1_Nr2f2_2/Jaspar(0.680) Distance From Peak(sequence,strand,conservation) 24-GGGAGCCGAAGG,BestGuess:POL013.1_MED-1/Jaspar(0.640) Distance From Peak(sequence,strand,conservation) 25-GAAACAGGAAGC,BestGuess:Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer(0.798) Distance From Peak(sequence,strand,conservation) 2-RCCGCGCA,BestGuess:PB0199.1_Zfp161_2/Jaspar(0.810) Distance From Peak(sequence,strand,conservation) 3-GCGGGGCCAGCG,BestGuess:Sp1(Zf)/Promoter/Homer(0.696) Distance From Peak(sequence,strand,conservation) 4-CGCGGAGCCGCG,BestGuess:POL013.1_MED-1/Jaspar(0.687) Distance From Peak(sequence,strand,conservation) 4-GGGCCGAKTT,BestGuess:POL003.1_GC-box/Jaspar(0.654) Distance From Peak(sequence,strand,conservation) 6-CKACTCGG,BestGuess:PB0199.1_Zfp161_2/Jaspar(0.534) Distance From Peak(sequence,strand,conservation) 7-GCCGCCATGGCS,BestGuess:Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.695) Distance From Peak(sequence,strand,conservation) 7-GCTGCGAAGC,BestGuess:POL013.1_MED-1/Jaspar(0.627) Distance From Peak(sequence,strand,conservation) 11-GCGGCCTGGCTG,BestGuess:ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer(0.681) Distance From Peak(sequence,strand,conservation) 561_WT_peak_1929 chr12 133263739 133264365 + 4609 NA promoter-TSS (NM_006231) promoter-TSS (NM_006231) 58 NM_006231 5426 Hs.524871 NM_006231 HPRD:07177 POLE CRCS12|FILS|POLE1 polymerase (DNA directed), epsilon, catalytic subunit protein-coding 0.135783 0.770335 -154(CCTCCCTCCCGC,+,0.00) 279(TCGGCGCC,+,0.00) -137(CGGCGCCAGCCG,+,0.00),-101(GAGGGCCGGCCC,+,0.00),408(CGGCGGGCGCTC,-,0.00) 108(CCCCCGCC,-,0.00),142(CGCCCGGC,-,0.00),147(GGCGGGGG,+,0.00),297(CGCCCGGC,-,0.00),326(CCCCCGGC,-,0.00) -95(CGGCCCGA,-,0.00),333(CGGCACGG,-,0.00) 172(CGGGGAAA,+,0.00),445(TCTACCCG,-,0.00) 346(GGGAGGCGATGG,+,0.00) -138(GCGGCGCCAGCC,+,0.00),286(CTCGGGCTCCGC,-,0.00) 222(GGGCGGCGCT,+,0.00),234(GGGCCGCGGT,+,0.00) -146(CCGCCTCG,-,0.00) -118(CCCCATGGCACC,-,0.00),350(GGCGATGGCGCC,-,0.00) -31(GCGCCGCCGC,-,0.00) 366(GCGTCCAGGCTG,+,0.00) 561_WT_peak_6902 chr7 150974131 150975108 + 4208 NA promoter-TSS (NM_003078) promoter-TSS (NM_003078) -388 NM_003078 6604 Hs.647067 NM_003078 HPRD:03440 SMARCD3 BAF60C|CRACD3|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding 0.060389 0.642127 -105(CGCGGCCGCC,-,0.00) 294(ATGTGGCT,+,0.00) -112(CCCGGAGCGCGG,-,0.00),-40(CGGGGGAGGCGC,-,0.00) 663(CGGGCAGGGA,-,0.00) 627(GGCGGGGG,+,0.00) 790(CCGTCTCTGCCC,+,0.00) -37(GGGAGGCGCAGG,+,0.00) 19(GGAGCAGGAAGC,+,0.00) -68(CCGGCGCCTGCG,+,0.00) -76(GGCTCGGCCC,-,0.00) 724(CAGGCAGGCAGC,-,0.00) 561_WT_peak_2870 chr16 67225432 67226403 + 4176 NA promoter-TSS (NM_001950) promoter-TSS (NM_001950) -151 NM_001950 1874 Hs.108371 NM_001950 HPRD:02806 E2F4 E2F-4 E2F transcription factor 4, p107/p130-binding protein-coding 0.054583 0.588477 537(GGCGGAGGCCGG,-,0.00) 717(TGGGCCGGTAGC,+,0.00) 741(GGCGGCCCAG,+,0.00) 445(CCGGCTGCCCGG,+,0.00) 583(CGGCACGA,-,0.00) 473(CGGAAGTGGCGG,+,0.00) -33(GCTTGCTGTTTG,-,0.00) 437(CGCTGGCTCCGG,-,0.00),484(GCGGCGCCGGCC,+,0.00),560(CGCCGCCCCCGG,-,0.00) 242(TGCCAGGGCGGC,-,0.00),489(GCCGGCCTGGCC,+,0.00),529(GGCGCGATGGCG,+,0.00) 481(GCGGCGGCGC,+,0.00),556(GCGCCGCCGC,-,0.00) 490(CCGGCCTGGCCT,+,0.00),500(CTGGCCTGGCTG,+,0.00),742(GCGGCCCAGCTG,+,0.00) 561_WT_peak_11 chr1 1243221 1244077 + 4095 NA promoter-TSS (NM_153339) promoter-TSS (NM_153339) -345 NM_153339 126789 Hs.400659 NM_153339 HPRD:08301 PUSL1 - pseudouridylate synthase-like 1 protein-coding 0.168224 0.774796 544(GGGGGAGGGGGG,-,0.00) -85(CGCCCCGGAATG,+,0.00) -90(CCGCCCGCCCCG,+,0.00),179(CGGGGAGGGCGC,-,0.00),190(CGGGGAGGGCGC,-,0.00),387(GCGCCTCCCGGG,+,0.00),540(CCGGGGGGGAGG,-,0.00) -150(GGCGCCGA,-,0.00),-97(TCGGCGCC,+,0.00),317(GGCGGCGA,-,0.00),645(TCGGCGCC,+,0.00) -144(GAGCGGCAGCCG,+,0.00),-135(CCGCGCCGGCCC,+,0.00),-96(CGGCGCCCGCCC,+,0.00),416(GAGCGCCTGCGC,+,0.00) 572(CGCGTCCG,+,0.00),574(CGTCCGCG,-,0.00),665(CGTGCGCG,-,0.00) 539(GCCGGGGG,+,0.00) -116(TCGTCCCG,+,0.00) -29(CGTCGCCA,+,0.00),23(CGTCGCCA,+,0.00),75(CGTCGCCA,+,0.00) 33(GTCCGCCG,-,0.00) -136(GCCGCGCC,+,0.00),-68(GCCGCGCC,+,0.00),-63(GCCGCGCC,+,0.00),312(TGGGCGGC,-,0.00),502(GGCGCGGT,-,0.00),513(ACCGCGCA,+,0.00) -119(CGCTCGTCCCGC,-,0.00),-110(CGCCCGCGCCGC,-,0.00),-89(CGCCCGCCCCGG,-,0.00),43(CGCGCGCGCCGC,-,0.00),56(CGCTGTCACCGC,-,0.00),128(GCGGGGCCTGCC,+,0.00),178(GCGGGGAGGGCG,+,0.00),189(GCGGGGAGGGCG,+,0.00),464(GCCCGGCCCCGC,-,0.00),505(GCGGTGCCACCG,+,0.00),534(CCGGGGCCGGGG,+,0.00) -153(CGCGGCGCCGAG,+,0.00),-153(CGCGGCGCCGAG,-,0.00),-69(CGCCGCGCCGCG,+,0.00),-69(CGCCGCGCCGCG,-,0.00),395(CGGGGCGCCGCG,+,0.00),395(CGGGGCGCCGCG,-,0.00) 463(AGCCCGGCCC,-,0.00) -102(CCGCCTCG,-,0.00) 494(GCCGCCGTGGCG,+,0.00),496(CGCCGTGGCGCG,-,0.00) 561_WT_peak_1049 chr10 75254995 75256346 + 4042 NA 5' UTR (NM_001289969, exon 1 of 13) 5' UTR (NM_001289969, exon 1 of 13) 112 NM_001142354 5532 Hs.500067 NM_021132 HPRD:00235 PPP3CB CALNA2|CALNB|CNA2|PP2Bbeta protein phosphatase 3, catalytic subunit, beta isozyme protein-coding 0.060696 0.602811 308(CCTTCCGGGCCC,-,0.00),472(GGCTCCGGGGCG,-,0.00) 299(CTCGCCCGCC,-,0.00) -49(CCGGGGAGCAGG,-,0.00),423(CCCGGGAGGGGG,-,0.00),424(CCGGGAGGGGGC,-,0.00) 630(CGCGTGCG,+,0.00) 436(GGCGGGGG,+,0.00),442(GGCGGGGG,+,0.00),518(GCCGGGCG,+,0.00),534(GGCGGGGG,+,0.00) 235(CCGACTCAGCCC,+,0.00) -30(CAAAGCCG,+,0.00),182(CAAAACCT,+,0.00),1075(CAAAACAG,+,0.00) 694(GAAACAGGACGA,+,0.00) 89(GCGGCCCCTGCG,+,0.00),437(GCGGGGGCGGGG,+,0.00),535(GCGGGGGCGGCG,+,0.00),562(CGGCGGCGCCGC,-,0.00),564(GCGGCGCCGCCG,+,0.00) 86(ATCGCGGCCC,-,0.00),98(GCGCCGCTTT,+,0.00),521(GGGCGGGGTT,+,0.00) 410(CGACGCGG,+,0.00) 561(GCGGCGGCGC,+,0.00) 370(AGGCCAGGCCCC,-,0.00),481(GCGGCCATGCTG,+,0.00) 561_WT_peak_2434 chr15 40400901 40401743 + 4014 NA promoter-TSS (NM_001003940) promoter-TSS (NM_001003940) -237 NM_001003943 90427 Hs.591104 NM_033503 HPRD:05881 BMF - Bcl2 modifying factor protein-coding 0.076010 0.632266 379(GGGGGAAGGAGG,-,0.00) 190(CCGACCGT,+,0.00) -124(CGCCCGGC,-,0.00),-117(CCCCCGGC,-,0.00) -84(CGGCAGGA,-,0.00) 195(CGTCGCCA,+,0.00),221(CGTCGCCA,+,0.00) -2(CGGTATTG,-,0.00) -73(GGGAGGCGCAGG,+,0.00) -56(GCGGCGGCGGCG,+,0.00),-53(GCGGCGGCGGCG,+,0.00) -129(AACTCCGCCC,-,0.00) 614(GCTGAGAAGC,+,0.00) 561_WT_peak_1517 chr11 123985508 123986421 + 3982 NA promoter-TSS (NM_014622) promoter-TSS (NM_014622) -147 NM_198315 4013 Hs.152944 NM_014622 HPRD:04238 VWA5A BCSC-1|BCSC1|LOH11CR2A von Willebrand factor A domain containing 5A protein-coding 0.018620 0.459519 404(TAGTCGCT,+,0.00) 541(AGGGCCTGGA,-,0.00) 405(AGTCGCTA,+,0.00) -95(CAGGTAAA,+,0.00) 169(GACACAGTAAGC,+,0.00) 561_WT_peak_6110 chr6 15245546 15246489 + 3979 NA promoter-TSS (NM_004973) promoter-TSS (NM_004973) -189 NM_004973 3720 Hs.269059 NM_004973 HPRD:03355 JARID2 JMJ jumonji, AT rich interactive domain 2 protein-coding 0.069989 0.620763 -76(GGAGGAGGGAGG,-,0.00) 163(GGCGGCCGTG,+,0.00),400(GGCGGCTGAG,+,0.00) -115(AAGCGTTT,+,0.00),69(AGGCGGCT,+,0.00),314(AGGTCGCT,+,0.00),399(TGGCGGCT,+,0.00) 254(TCCACGCC,+,0.00),278(GCGACGCC,+,0.00),756(GGCGTCGG,-,0.00) 423(CGGCTGGCGCCC,-,0.00) -133(CGCACGCG,-,0.00) 317(TCGCTCGG,-,0.00),371(GCGGTCGG,-,0.00) 86(GCCGGGCG,+,0.00),146(GGCGGGGG,+,0.00),430(CGCCCGGC,-,0.00) 376(CGGCACCA,-,0.00) 208(GAGCGACG,-,0.00),276(GAGCGACG,-,0.00) 761(CGGTTTTT,-,0.00) 568(CGCCGCCGCCGC,-,0.00),571(CGCCGCCGCCGC,-,0.00),574(CGCCGCCGCCGC,-,0.00),577(CGCCGCCGCCGC,-,0.00) 394(GCGCCTGGCGGC,-,0.00) 341(GCTGCGGGGG,+,0.00) 114(GCAGCCCGGCTG,+,0.00),115(CAGCCCGGCTGC,-,0.00) 561_WT_peak_7181 chr8 144679000 144679840 + 3935 NA promoter-TSS (NM_032862) promoter-TSS (NM_032862) 138 NM_001130057 1936 Hs.333388 NM_001960 HPRD:00560 EEF1D EF-1D|EF1D|FP1047 eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) protein-coding 0.107143 0.687277 -115(TAGCGTCT,+,0.00),593(AGGCCGCT,+,0.00) 286(CCGCCCTCCCGG,+,0.00) 537(TCGACGCG,+,0.00) 225(GCGCTGGCGCAC,-,0.00) 131(CGCGGACG,+,0.00),394(CGGACGCG,-,0.00),434(CGCGCACG,+,0.00) 292(TCCCGGCCCC,+,0.00) 333(GGCGGGGG,+,0.00),477(GCCGGGGG,+,0.00) 255(CGGCGCGA,-,0.00) 289(CCCTCCCGGCCC,+,0.00) 391(CGGCGGAC,+,0.00) 432(GCCGCGCA,+,0.00) 334(GCGGGGGCCGCG,+,0.00),427(CCCGGGCCGCGC,-,0.00) 338(GGGCCGCGGT,+,0.00) 663(CTTCGCGG,+,0.00) 423(GCCGCCCGGGCC,+,0.00),524(GCCGCCAGGACC,+,0.00) 662(GCTTCGCGGC,-,0.00) 64(GCAGCCTGGCCG,+,0.00),65(CAGCCTGGCCGA,-,0.00),425(CGCCCGGGCCGC,-,0.00),517(CCGCCTGGCCGC,-,0.00),525(CCGCCAGGACCC,-,0.00) 561_WT_peak_2694 chr16 10970511 10971515 + 3835 NA promoter-TSS (NM_000246) promoter-TSS (NM_000246) -42 NM_000246 4261 Hs.701991 NM_000246 HPRD:02475 CIITA C2TA|CIITAIV|MHC2TA|NLRA class II, major histocompatibility complex, transactivator protein-coding 0.014940 0.510448 32(GGCGGAGGGCTA,-,0.00) 764(AGGTGTCT,+,0.00) 527(TCCACGCC,+,0.00) 454(GGGCACGA,-,0.00) 126(CGTCAGAC,+,0.00) 424(GGCATCCGAAGG,+,0.00) 269(GAAACAGAAATC,+,0.00) 355(CTTGGCGG,+,0.00) 488(GCTGCCTGGCTG,+,0.00) 561_WT_peak_2647 chr16 1358637 1359539 + 3819 NA promoter-TSS (NM_194260) promoter-TSS (NM_194260) -66 NM_194260 7329 Hs.302903 NM_003345 HPRD:09045 UBE2I C358B7.1|P18|UBC9 ubiquitin-conjugating enzyme E2I protein-coding 0.109756 0.705426 113(GGGACCGGAAGC,+,0.00) 104(GCGGGAGGGGGG,-,0.00) 194(CAGGGCCAGCCC,+,0.00) -127(AGGGGAGGGA,-,0.00),-3(GGGGCCGGGA,-,0.00) -9(GGCGGGGG,+,0.00),150(CCCCCGCC,-,0.00),417(CCCCCGGC,-,0.00),656(CCCCCGGC,-,0.00) 237(CGTCGGTC,+,0.00) 207(CGGTTTAG,-,0.00) 510(GCTTCCTTTTTC,-,0.00) 139(GGCTCGCCCCGC,-,0.00),145(CCCCGCCCCCGC,-,0.00),703(GCGGGGCGCGGG,+,0.00) 626(GTCCAGGGCGCC,-,0.00) 700(GCGGCGGGGC,+,0.00) 635(GCCGCCTGACTG,+,0.00) 561_WT_peak_3554 chr19 924760 925966 + 3790 NA promoter-TSS (NM_005224) promoter-TSS (NM_005224) -674 NM_005224 1820 Hs.501296 NM_005224 ARID3A BRIGHT|DRIL1|DRIL3|E2FBP1 AT rich interactive domain 3A (BRIGHT-like) protein-coding 0.087894 0.694283 908(GGAGGGGGGCGA,-,0.00) 333(GGCTCCGGGTCC,-,0.00) 269(GGCAGCCGAG,+,0.00) 602(AGAGACTT,-,0.00) 766(CCGGGGGCGGGG,-,0.00),871(CAGCGCCCCCGG,+,0.00),905(GCGGGAGGGGGG,-,0.00) 435(CCGACGCC,+,0.00) 694(CCGCCCCAGCCC,+,0.00),700(CAGCCCCTGCCC,+,0.00) 71(CCGACCGC,+,0.00) -147(AGGGGAGGGA,-,0.00),299(CGGGCCGGGC,-,0.00) 709(CCCCCGGC,-,0.00),765(GCCGGGGG,+,0.00),781(CCCGCGGC,-,0.00) 671(CCTCTTCTTCCC,-,0.00) 756(CGTCCCTA,+,0.00) 433(CTCCGACG,-,0.00),896(CGTCAGAC,+,0.00) 929(CGGGGAAA,+,0.00) 32(CCCGCGCA,+,0.00),117(TGCGCAGT,-,0.00),346(AGCGCGCA,+,0.00) 704(CCCTGCCCCCGG,-,0.00) -128(AACCCCGCCC,-,0.00),437(GACGCCGCCC,-,0.00),731(GGGCCGCGTC,+,0.00) 734(CCGCGTCG,-,0.00) 865(GCTCCCCAGC,-,0.00) 295(CAGCCGGGCCGG,-,0.00),636(CGGCCAGCCCGC,-,0.00),965(CGCCCGGGCCGC,-,0.00) 561_WT_peak_3809 chr19 46220542 46221145 + 3727 NA intron (NM_001080469, intron 1 of 1) intron (NM_001080469, intron 1 of 1) 13308 NM_001080469 23403 Hs.128702 NM_001080469 ENSG00000177051 FBXO46 20D7-FC4|FBXO34L|Fbx46 F-box protein 46 protein-coding 0.069652 0.610927 334(GGCGGGGG,+,0.00) -27(CGCTCTCAGCCA,+,0.00) 249(CAGGCAGCCCGG,-,0.00) 561_WT_peak_4470 chr2 219260629 219261751 + 3647 NA 3' UTR (NM_000578, exon 15 of 15) 3' UTR (NM_000578, exon 15 of 15) -1871 NM_001206878 58190 Hs.444468 NM_021198 HPRD:05615 CTDSP1 NIF3|NLI-IF|NLIIF|SCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 protein-coding 0.058824 0.635797 584(CCGCCCGCCTCC,+,0.00) -43(GGCGGCCGCG,+,0.00) 39(CCGCCATCCCGC,+,0.00),85(GCGGGGAGGCGG,-,0.00),416(CAGGGCAGGCGG,-,0.00) 32(CCGACGCC,+,0.00) 91(AGGCGGGCGCTC,-,0.00) 76(CGGAACGA,-,0.00) 147(GGGAGGAAGCTG,+,0.00) 661(TAGCGAAG,-,0.00) 18(GGGCAGAGACGG,-,0.00) -50(GGGAGCCGGCGG,+,0.00) -25(GCCGCGCC,+,0.00) 427(GCCTGGCTCCGC,-,0.00) 428(CCTGGCTCCGCG,-,0.00) 81(CGACGCGG,+,0.00) 424(GCGGCCTGGCTC,+,0.00) 561_WT_peak_525 chr1 151689190 151689734 + 3616 NA promoter-TSS (NM_001172648) promoter-TSS (NM_001172648) -166 NM_001291106 11189 Hs.26047 NM_007185 CELF3 BRUNOL1|CAGH4|ERDA4|ETR-1|TNRC4 CUGBP, Elav-like family member 3 protein-coding 0.033088 0.585321 -139(CTGCTTTCCCGG,+,0.00) -8(GGGGTCGA,-,0.00) 217(GGGCTGGAGCTG,-,0.00) 37(AGGCACGA,-,0.00) 265(CGGGGAAA,+,0.00) -103(CTCCGGCCGCGC,-,0.00) 561_WT_peak_6782 chr7 102003697 102004444 + 3576 NA promoter-TSS (NR_038967) promoter-TSS (NR_038967) -238 NR_038967 100630923 Hs.406395 NR_038967 LOC100630923 - LOC100289561-PRKRIP1 readthrough ncRNA 0.049531 0.556150 -137(CTCGGCCTCC,-,0.00) 373(CCCGGGAGGCGG,-,0.00) 435(CGCGTGCG,+,0.00) 237(CGCGTAAA,+,0.00) -99(ACCGCGCC,+,0.00) 90(AACGCAGCCC,-,0.00) -141(CCGCCTCG,-,0.00) 561_WT_peak_4674 chr20 48330430 48331188 + 3539 NA promoter-TSS (NM_004776) promoter-TSS (NM_004776) -388 NM_004776 9334 Hs.370487 NM_004776 HPRD:06807 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 protein-coding 0.059367 0.554677 -132(GGCGGAGGCGGG,-,0.00) -113(CGCGGGAGGCGG,-,0.00) -55(TCGCCGCC,+,0.00),-38(TCGGCGCC,+,0.00) -119(CGCACGCG,-,0.00) -42(TCGCTCGG,-,0.00) -138(GGCGGGGG,+,0.00) -82(CGTCGCAA,+,0.00) 28(ACCGCCCA,+,0.00) -149(GCGGGCGCAGCG,+,0.00),-105(GCGGGGCCAGTG,+,0.00) -162(AGAGCGGCCC,-,0.00) 561_WT_peak_4055 chr2 46727156 46727951 + 3532 NA Intergenic Intergenic 19543 NM_080653 90423 Hs.659656 NM_080653 HPRD:16525 ATP6V1E2 ATP6E1|ATP6EL2|ATP6V1EL2|VMA4 ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2 protein-coding 0.035220 0.452261 185(TCCTCCTCCTCC,+,0.00) 61(TGGGTCGG,-,0.00) 42(CCCCTCCTCCCG,-,0.00) 561_WT_peak_5881 chr5 115176894 115177732 + 3442 NA promoter-TSS (NM_001284) promoter-TSS (NM_001284) 235 NM_001277783 9140 Hs.264482 NM_004707 HPRD:08496 ATG12 APG12|APG12L|FBR93|HAPG12 autophagy related 12 protein-coding 0.078759 0.589988 281(GGAGTAGGGGGA,-,0.00) 460(AGGCCGCT,+,0.00) -72(GGACAGGCGCTC,-,0.00),622(GCGCGCCCGCCC,+,0.00) 564(CGCGTGCG,+,0.00) 435(TCGGTCGA,-,0.00),535(CCGCCCGA,+,0.00),657(CCGGTCGG,-,0.00) 631(CCCCCGCC,-,0.00) 80(CGGAAGACGGGG,+,0.00) 220(TAGCGACT,-,0.00),263(CGTCGCAA,+,0.00) -1(GCCTCTCTGCCC,+,0.00) 537(GCCCGACG,-,0.00) 66(CGGGGAAA,+,0.00) 151(GAAGTAGGAAGC,+,0.00) 513(CCCAGGCCCCGC,-,0.00) -27(CTACTCGG,+,0.00) 633(CCCGCCCTGGCC,+,0.00) 455(CAGTTAGGCCGC,-,0.00),511(CGCCCAGGCCCC,-,0.00) 561_WT_peak_447 chr1 145575363 145576263 + 3413 NA promoter-TSS (NM_006099) promoter-TSS (NM_006099) -175 NM_006099 10401 Hs.435761 NM_006099 HPRD:09068 PIAS3 ZMIZ5 protein inhibitor of activated STAT, 3 protein-coding 0.071111 0.632630 233(CCCCCCTCCACC,+,0.00),257(CCCGCCTCCTCC,+,0.00),557(GGAGCTGGGCGA,-,0.00) 418(CCGGGAAGGGGA,-,0.00) 669(GGCGCCGA,-,0.00) 525(CGGCTGGGGCGC,-,0.00) 358(TGGGTCGG,-,0.00),638(GCGACCGA,+,0.00) 414(GGGGCCGGGA,-,0.00) 686(AGGCACGA,-,0.00) 114(CTTCGCTA,+,0.00) -75(GTCCTACG,-,0.00),396(GTCCGAAG,-,0.00) 184(TCTTTGGCTCCC,-,0.00) 412(GCGGGGCCGGGA,+,0.00),472(CCGGCGCCAGGG,+,0.00) 315(CGGGGCTACGCG,-,0.00) 561_WT_peak_5239 chr3 127309067 127310001 + 3369 NA promoter-TSS (NM_001136053) promoter-TSS (NM_001136053) 68 NM_001136053 131601 Hs.6418 NM_016372 HPRD:16318 TPRA1 GPR175|TMEM227|TPRA40 transmembrane protein, adipocyte asscociated 1 protein-coding 0.101713 0.685561 55(CCCGGCCGCC,-,0.00),64(CCCGGCCGCC,-,0.00) 552(AGAGGCCT,-,0.00) 130(CAGCGCCAGACC,+,0.00) 625(CCTACGCG,-,0.00),744(CGCGTGCG,+,0.00) -115(CCGTCCGA,+,0.00) 150(TGGGCCGGGA,-,0.00) 111(GCCGCGGG,+,0.00),241(GCCGCGGG,+,0.00) -10(CGGCAGGA,-,0.00) 296(CAAGACCG,+,0.00) 68(GCCGCCCA,+,0.00),93(TGCGCGGA,-,0.00) -43(CCGGGGCGAGGG,+,0.00),29(CCCGGGCCGCGC,-,0.00),223(GCGGGGTCAGCT,+,0.00) 235(CGCCGGGCCGCG,+,0.00) 32(GGGCCGCGCT,+,0.00),717(GGGCGGAGCC,+,0.00) 219(CGAGGCGG,+,0.00) -125(GCCGCCTTGGCC,+,0.00),50(GCCGCCCCGGCC,+,0.00),59(GCCGCCCCGGCC,+,0.00) 153(GCCGGGAAGC,+,0.00) 561_WT_peak_2143 chr14 24582910 24584160 + 3342 NA promoter-TSS (NM_181357) promoter-TSS (NM_181357) -371 NM_001163484 80344 Hs.525251 NM_025230 HPRD:18297 DCAF11 PRO2389|WDR23 DDB1 and CUL4 associated factor 11 protein-coding 0.068800 0.613909 193(GGCGGCGA,-,0.00) -38(TCCCTGCCCT,+,0.00) 215(CCCGCGGC,-,0.00),221(GCCGGGGG,+,0.00) 1024(TCGCGCCG,+,0.00) 257(TAGCGAAG,-,0.00) 51(GCCTCTGAGCCC,+,0.00),226(GGGCGGAGAGGC,-,0.00),711(GCCTCTCAGCCG,+,0.00) 514(CAGAACCG,+,0.00) 406(CGGATAAA,+,0.00) 746(GATTCAGGAAGC,+,0.00) 200(AGCGCGCA,+,0.00) 208(CCCTGGACCCGC,-,0.00),901(GCGGGGCCGTCG,+,0.00),1034(GCGGGTCCTGCG,+,0.00) 891(GGCCAAGGGGGC,-,0.00) 711(GCCTCTCAGC,-,0.00) 99(CAGCCAGGGCGA,-,0.00) 561_WT_peak_3370 chr17 76970786 76971530 + 3323 NA intron (NM_005567, intron 3 of 5) intron (NM_005567, intron 3 of 5) 4903 NM_005567 3959 Hs.514535 NM_005567 HPRD:02796 LGALS3BP 90K|BTBD17B|CyCAP|M2BP|MAC-2-BP|TANGO10B|gp90 lectin, galactoside-binding, soluble, 3 binding protein protein-coding 0.028226 0.511409 175(AGCGACAT,-,0.00) -151(TCGTGCCT,+,0.00) 561_WT_peak_1365 chr11 65429951 65431494 + 3309 NA promoter-TSS (NM_001243984) promoter-TSS (NM_001243984) -279 NM_001243985 5970 Hs.502875 NM_021975 HPRD:01241 RELA NFKB3|p65 v-rel avian reticuloendotheliosis viral oncogene homolog A protein-coding 0.082955 0.667098 299(CTGCCCGGAATC,+,0.00),477(GCTCCCGGGTCC,-,0.00) 783(ATGCGGCT,+,0.00) 27(CCGCCTGCCCCG,+,0.00),199(CCGGGGGCGGGG,-,0.00),629(CCGCCCGCCCCG,+,0.00) 1209(AGGCTGGGGCTG,-,0.00) 1196(CGCGTCCG,+,0.00) 61(CCGACCGC,+,0.00),654(CCGACCGG,+,0.00) 350(GGGGCCGGGA,-,0.00),486(TCCCGGCCCC,+,0.00) 228(CCCGCGGC,-,0.00),339(CGCCCGGC,-,0.00),408(GCCGGGGG,+,0.00),1096(CCCCCGCC,-,0.00) 161(GGGGTCAGAGGG,-,0.00) 509(GTCCGCCG,-,0.00) 988(GGGGTAAA,+,0.00) -55(CCCTCTGCTCCC,-,0.00),663(CCTTCTGCTCCG,-,0.00),970(GGGAGCAGGAGG,+,0.00) 73(TGCGCAGC,-,0.00),313(GCCGCGCC,+,0.00),321(TGCGCGCT,-,0.00),637(CCCGCGCA,+,0.00) 28(CGCCTGCCCCGC,-,0.00),135(CGGCGGCCCCGG,-,0.00),137(GCGGCCCCGGCG,+,0.00),159(GCGGGGTCAGAG,+,0.00),205(GCGGGGCCGGGG,+,0.00),221(AGCTGGGCCCGC,-,0.00),222(GCTGGGCCCGCG,+,0.00),486(TCCCGGCCCCGC,-,0.00),630(CGCCCGCCCCGC,-,0.00),1091(CCCTGCCCCCGC,-,0.00) 315(CGCGCCTGCGCG,-,0.00),997(CCCGGAGCCTCG,+,0.00) 105(AAAGCGGCGC,-,0.00),589(GGGCCGGGTC,+,0.00),1272(GGGCGGAGTC,+,0.00) -94(GCCCCCATGGAC,+,0.00),183(GTCCATGGCCGG,-,0.00) 329(GCCCCGCCGC,-,0.00),669(GCTCCGCAGA,-,0.00) 561_WT_peak_1339 chr11 64794391 64795445 + 3303 NA promoter-TSS (NM_013306) promoter-TSS (NM_013306) 38 NM_013306 29907 Hs.80132 NM_013306 HPRD:12073 SNX15 HSAF001435 sorting nexin 15 protein-coding 0.050285 0.537441 379(GGCGGAGGCTGG,-,0.00) 597(GGCGCCGA,-,0.00),759(GGCGTTGA,-,0.00) 421(AGGCCGGCGCTC,-,0.00) 570(CGCGTACT,+,0.00) 485(CGGCACTA,-,0.00) 498(TGTCGGAC,+,0.00) 577(TTTACCCT,-,0.00) 288(GCCGCGCA,+,0.00),545(ACCGCGCA,+,0.00) 598(GCGCCGAGTT,+,0.00),722(GGGCGGGGTC,+,0.00) 366(CGAGGCGG,+,0.00) 561_WT_peak_2641 chr16 420472 421063 + 3289 NA promoter-TSS (NM_006428) promoter-TSS (NM_006428) -198 NM_006428 10573 Hs.513230 NM_006428 ENSG00000086504 MRPL28 MAAT1|p15 mitochondrial ribosomal protein L28 protein-coding 0.052453 0.545608 -89(TGGCCCTCCTCC,+,0.00) -115(GGAACCGGAAGC,+,0.00) 118(CCGGGAAGGAGC,-,0.00) -39(TCGTCCCG,+,0.00),70(CGGCACGG,-,0.00) 36(TAGCTACG,-,0.00) -115(GGAACCGGAAGC,+,0.00) -97(GCCGCGCC,+,0.00) 45(GCGGCCCCGGCG,+,0.00) 60(CCGCGAAG,-,0.00) -73(GCTGACTGGCTG,+,0.00) 561_WT_peak_1402 chr11 71639372 71640355 + 3286 NA promoter-TSS (NR_029192) promoter-TSS (NR_029192) 95 NR_024147 55298 Hs.368554 NM_018320 HPRD:11497 RNF121 - ring finger protein 121 protein-coding 0.053917 0.569106 161(ACTTCCGGGTCA,-,0.00) 53(CCTACCGA,+,0.00) 521(CGGAAGCAGCTG,+,0.00),741(GGGAAGGAGCTG,+,0.00) 244(CGTCGCGA,+,0.00) 259(CCGTTTTG,-,0.00) 539(GCGGGGACTGCG,+,0.00) 809(CGAGGCGG,+,0.00) 561_WT_peak_3901 chr19 56159115 56159975 + 3281 NA 5' UTR (NM_013301, exon 1 of 6) 5' UTR (NM_013301, exon 1 of 6) 591 NM_013301 29903 Hs.82482 NM_013301 CCDC106 HSU79303|ZNF581 coiled-coil domain containing 106 protein-coding 0.101163 0.706156 344(CGAGCCGGATTC,+,0.00) 57(CGGGGAGGGCGG,-,0.00) 658(GGGCTGGACCTC,-,0.00) 558(CGCACGCG,-,0.00),651(CGCGCACG,+,0.00) 198(TCCCTGCCCG,+,0.00) 64(GGCGGGGG,+,0.00),413(GGCGGGGG,+,0.00),439(CCCCCGCC,-,0.00),509(GGCGGGGG,+,0.00),515(GGCGGGGG,+,0.00) 108(CTGCTTCTGCCG,-,0.00) 211(CGTCGCTC,+,0.00) 334(CGTCGGTC,+,0.00),391(CCTCGGAC,+,0.00) 545(TTTCCCCG,-,0.00) 274(CCCTCGGCTCCC,-,0.00),627(GGGCCCCGAAGG,+,0.00) 554(ACTGCGCA,+,0.00),649(AGCGCGCA,+,0.00) 510(GCGGGGGCGGGG,+,0.00) 276(CTCGGCTCCCCG,-,0.00) 425(TGGCCGCGTT,+,0.00) 324(GCGCCGCCGC,-,0.00) 561_WT_peak_1908 chr12 123459070 123460062 + 3143 NA 5' UTR (NM_024623, exon 1 of 8) 5' UTR (NM_024623, exon 1 of 8) 212 NM_024623 79676 Hs.524817 NM_024623 HPRD:07829 OGFOD2 - 2-oxoglutarate and iron-dependent oxygenase domain containing 2 protein-coding 0.082661 0.623364 65(GGGACCGGAAGC,+,0.00),685(GACTACGGCCCG,-,0.00) 523(AAGTCTCT,+,0.00) -44(CCGCCCTCCCGC,+,0.00),212(CCGGGCAGACGG,-,0.00) -113(TCGGTCTG,-,0.00),231(TGGGTCGG,-,0.00) 222(GGCGGGGG,+,0.00) 293(AGGCACGA,-,0.00),365(CGGAACGA,-,0.00) 493(CCGCGCCTCCCG,-,0.00) 566(TGGCGACG,-,0.00),712(CGTCCCTA,+,0.00) 729(GGGCAGAGAGGG,-,0.00) 156(AGTCGGAC,+,0.00) 271(CCTTCCTCTCCC,-,0.00) 788(GCCGCGCA,+,0.00) 485(CGCTGGTTCCGC,-,0.00) 576(GGGGGCTCCGCG,-,0.00) -48(GACCCCGCCC,-,0.00),389(AACCCGGCCC,-,0.00),469(AGAGCGGCCC,-,0.00) 154(CTAGTCGG,+,0.00) 580(GCTCCGCGGC,-,0.00) 561_WT_peak_1645 chr12 31881693 31882479 + 3139 NA promoter-TSS (NR_103523) promoter-TSS (NR_103523) 22 NM_001278411 196394 Hs.585084 NM_001113402 HPRD:14115 AMN1 - antagonist of mitotic exit network 1 homolog (S. cerevisiae) protein-coding 0.081425 0.626429 100(AAGCCTCT,+,0.00),484(AAGTCGCT,+,0.00) 437(GCGACGCC,+,0.00) 173(CGCGTAGG,+,0.00) -58(GGCGGGGG,+,0.00) 14(CGGCGCGA,-,0.00) 289(CGGAAGAGGCTG,+,0.00) 485(AGTCGCTA,+,0.00) 229(CTTCGGAC,+,0.00) 285(TGCGCGGA,-,0.00),421(AGCGCGCA,+,0.00) 423(CGCGCAGCCCCG,+,0.00),436(CGCGACGCCGCG,+,0.00),436(CGCGACGCCGCG,-,0.00) 266(GGGCGGAGCC,+,0.00),316(AAAGAGGCCC,-,0.00) -154(CCGCCAAG,-,0.00),435(CCGCGACG,-,0.00) 67(CCCGCCGTGGGC,+,0.00) 429(GCCCCGCCGC,-,0.00),434(GCCGCGACGC,+,0.00) 427(CAGCCCCGCCGC,-,0.00) 561_WT_peak_1138 chr10 104952287 104953648 + 3118 NA promoter-TSS (NM_012229) promoter-TSS (NM_012229) 96 NM_012229 22978 Hs.97439 NM_012229 HPRD:02686 NT5C2 GMP|NT5B|PNT5|SPG45|SPG65|cN-II 5'-nucleotidase, cytosolic II protein-coding 0.088170 0.659325 177(GGAAGAGGGCGG,-,0.00) 271(TGGGCCGGAGGC,+,0.00) 35(GGCGACCGAG,+,0.00) -103(TGGCGGCT,+,0.00),584(AGCCGCCT,-,0.00) 420(CCGGGGGCGGGG,-,0.00),503(GCTCCTTCCCCG,+,0.00),598(GCGCCCTCCCCG,+,0.00) 280(GGCGTCGC,-,0.00) 353(CGTCCGCG,-,0.00) 36(GCGACCGA,+,0.00) 316(GGCGGGGG,+,0.00),419(GCCGGGGG,+,0.00),425(GGCGGGGG,+,0.00),610(CCCCCGCC,-,0.00),617(CGCCCGGC,-,0.00),651(CGCCCGGC,-,0.00) 295(CGGAGGAAGGGG,+,0.00),501(CCGCTCCTTCCC,-,0.00) 601(CCCTCCCCGCCC,+,0.00),889(GGGAGGAGAGGG,-,0.00) 780(CGGCTTTG,-,0.00) 900(GCATCCTTTTTC,-,0.00) 468(GCCGCGCA,+,0.00),568(AGCGCGCA,+,0.00) 599(CGCCCTCCCCGC,-,0.00),605(CCCCGCCCCCGC,-,0.00) 285(CGCGGCGGCGCG,+,0.00),285(CGCGGCGGCGCG,-,0.00) 25(CTTCTCGG,+,0.00),282(CGTCGCGG,+,0.00) 400(GGGGCCATGGTC,+,0.00),967(CCCCATGGCACC,-,0.00) 207(GCTGGGAGGC,+,0.00),281(GCGTCGCGGC,-,0.00),286(GCGGCGGCGC,+,0.00),688(GCTCCGCCGC,-,0.00) 561_WT_peak_1662 chr12 46122198 46123010 + 3084 NA promoter-TSS (NR_028408) promoter-TSS (NR_028408) -900 NR_028408 400027 Hs.597122 NR_028408 ENSG00000273015 LINC00938 - long intergenic non-protein coding RNA 938 ncRNA 0.084975 0.591636 479(GGCGGCAGAG,+,0.00),576(AGCGGCCGAG,+,0.00) 57(AGCCGATT,-,0.00) 230(CCGGGGACGCGA,-,0.00) 183(TCTGTCGG,-,0.00),187(TCGGGCGG,-,0.00) -97(CGGCAAGA,-,0.00) 481(CGGCAGAGAGGG,-,0.00) 179(CGGTTCTG,-,0.00),311(CGGCTTTG,-,0.00) 285(TTTCCCCG,-,0.00) 224(GCCGGGCCGGGG,+,0.00),427(CCGCGGCCAGCC,+,0.00),604(CGAGGGCCCCGC,-,0.00),614(GCGGAGCCGGGG,+,0.00),636(CGCTGTCACCGC,-,0.00) 420(CGCAGTGCCGCG,+,0.00),613(CGCGGAGCCGGG,+,0.00) 205(CGAGGCGG,+,0.00),473(CGTGGCGG,+,0.00) 470(GGCCGTGGCGGC,-,0.00) 463(GCTGCCAGGC,+,0.00) 222(CAGCCGGGCCGG,-,0.00),464(CTGCCAGGCCGT,-,0.00) 561_WT_peak_4869 chr22 29663461 29664845 + 2969 NA promoter-TSS (NM_012265) promoter-TSS (NM_012265) 155 NM_001163285 2130 Hs.374477 NM_005243 HPRD:00592 EWSR1 EWS|bK984G1.4 EWS RNA-binding protein 1 protein-coding 0.094653 0.664260 316(CAGCCCTCCCGC,+,0.00),884(CCGGGCGGGCCG,-,0.00),1131(CCTCCCTCCCCG,+,0.00) 36(TCGAGGCC,+,0.00),703(GGCGTCCA,-,0.00),1038(TCGAGGCC,+,0.00) 244(CGGCTGGCGCGC,-,0.00) 533(CGGACGCG,-,0.00) 54(CCGACCGG,+,0.00),141(CCGGTCGG,-,0.00),239(CCGACCGG,+,0.00) 121(CGCCCGGC,-,0.00),265(CCCGCGGC,-,0.00),941(GGCGGGGG,+,0.00),1097(GCCGGGGG,+,0.00) 410(TCGTGCTG,+,0.00),735(TCGCGCCG,+,0.00),839(CGGCCCGA,-,0.00) 366(CGTCCCTA,+,0.00) 444(CCCGCTCACCCC,+,0.00) 495(CGTCGGGC,+,0.00),841(GCCCGACG,-,0.00) 894(CGGTTCTG,-,0.00) 210(TCCGCGCA,+,0.00),629(TGCGCAGT,-,0.00) 79(CGCTGGCCCGGG,-,0.00),266(CCGCGGCCCGCG,+,0.00),951(CGCGGGGCCCGC,-,0.00),952(GCGGGGCCCGCC,+,0.00),1022(GCGGGGCCTGCG,+,0.00) 890(GGGCCGGTTC,+,0.00) 1011(CCGCCACG,-,0.00) 958(CCCGCCTTGGCC,+,0.00) 561_WT_peak_1192 chr11 5246179 5247364 + 2966 NA TTS (NM_000518) TTS (NM_000518) 1530 NM_000518 3043 Hs.523443 NM_000518 HPRD:00786 HBB CD113t-C|beta-globin hemoglobin, beta protein-coding 0.004219 0.389545 126(AAGCCTCT,+,0.00) 561_WT_peak_1661 chr12 46120929 46121855 + 2942 NA non-coding (NR_028408, exon 1 of 1) non-coding (NR_028408, exon 1 of 1) 312 NR_028408 400027 Hs.597122 NR_028408 ENSG00000273015 LINC00938 - long intergenic non-protein coding RNA 938 ncRNA 0.061555 0.580367 647(AGCACCGGAAGC,+,0.00) -146(CGCGGCCGAG,+,0.00),197(GGCGGCCGCG,+,0.00) 190(CCGGGGAGGCGG,-,0.00),499(CCACCTCCCCGG,+,0.00) -158(CTGCACGA,-,0.00),253(CGGCAGGA,-,0.00) -148(GGCGCGGC,-,0.00),-62(GCCGCGCC,+,0.00),246(GGCGCGGC,-,0.00) 238(GCGGCGGCGGCG,+,0.00),480(CCGCGGCCGGCG,+,0.00) 381(CGCAGCTCCGAG,-,0.00) 509(GGGCCGGGTC,+,0.00) 241(GCGGCGGCGC,+,0.00),377(GCCACGCAGC,-,0.00) 561_WT_peak_6371 chr6 74229793 74231696 + 2865 NA promoter-TSS (NM_001402) promoter-TSS (NM_001402) 11 NM_001402 1915 Hs.535192 NM_001402 HPRD:00559 EEF1A1 CCS-3|CCS3|EE1A1|EEF-1|EEF1A|EF-Tu|EF1A|GRAF-1EF|HNGC:16303|LENG7|PTI1|eEF1A-1 eukaryotic translation elongation factor 1 alpha 1 protein-coding 0.073568 0.596113 1388(CGCCCCGGCTTC,+,0.00) 499(AGAGACTT,-,0.00) 382(TCGCCGCC,+,0.00),619(GGCCTCGA,-,0.00),686(GGCGTGGA,-,0.00) 547(CGCACGCG,-,0.00) 218(CCGACCGG,+,0.00),309(CCGTCCGA,+,0.00),1155(CCGGTCGG,-,0.00) 177(AGGGCCGGGA,-,0.00),242(AGGGCGGGGC,-,0.00),1460(AGGGTCGGGA,-,0.00) 388(CCCGCGGC,-,0.00) 213(TGGTGCCG,+,0.00),261(CGGCGCGA,-,0.00),1510(CGGCTCGA,-,0.00) 77(AAGCGACG,-,0.00),1091(TAACGACG,-,0.00),1527(AAGCGACG,-,0.00) 399(AAAAACCG,+,0.00),780(CAAACCCG,+,0.00) 846(CGGGAAAA,+,0.00),887(TTTACCCC,-,0.00) 1272(CCTTCGCCTCTC,-,0.00) 235(GCCGCCCA,+,0.00) 321(CGGTGGCCGCGC,-,0.00),334(CGCAGGCCCCGC,-,0.00),555(GCGGCCCCAGCG,+,0.00) 342(CCGCCTCG,-,0.00),943(CTTCTCGG,+,0.00) 238(GCCCAGGGCGGG,-,0.00) 180(GCCGGGAAGC,+,0.00),362(GCTGGGACGC,+,0.00),464(GCGTCGCAGC,-,0.00) 570(AAGCCAGGCCTC,-,0.00) 561_WT_peak_4309-2 chr2 134876820 134878304 + 2788 NA Intergenic CpG -7134 NR_037450 100500878 NR_037450 miRBase:MI0016080 MIR3679 - microRNA 3679 ncRNA 0.085580 0.635017 1037(CTCTGCCGCC,-,0.00) 58(AAGTGGCT,+,0.00) 472(CCGGGGGCGGGG,-,0.00) 797(GGCGTCGC,-,0.00) 1010(GCGGTCGG,-,0.00) 1311(CGGGCCGGGC,-,0.00) 471(GCCGGGGG,+,0.00),741(CCCGCGGC,-,0.00),1159(CCCCCGCC,-,0.00),1242(GGCGGGGG,+,0.00) 816(TCGGGCCG,+,0.00) 799(CGTCGCGA,+,0.00),1029(CGTCGCTC,+,0.00) 647(GGGCTGAGTGTG,-,0.00) 906(CGTCGGAG,+,0.00) 732(CCTGCGGCTCCC,-,0.00) 126(GAAAGAGGAAAC,+,0.00) 779(GCCGCGCC,+,0.00),1007(GGCGCGGT,-,0.00),1222(TGCGCGGG,-,0.00) 466(GCGCGGCCGGGG,+,0.00),748(CGGCGGCCCCGG,-,0.00),999(CCGGGGTCGGCG,+,0.00),1057(CCCCGGCCCCGG,-,0.00) 670(CGCGGCCCCGCC,-,0.00) 818(GGGCCGCGTG,+,0.00) 640(CGTCTCGG,+,0.00) 598(CCCGCCCTGGTC,+,0.00),676(CCCGCCAGGGCT,+,0.00),827(GGGCACGGCGGC,-,0.00) 211(GCTTCGCTGC,-,0.00),370(GCTGCGGAAC,+,0.00) 561_WT_peak_4309 chr2 134875910 134876387 + 2788 NA Intergenic Intergenic -8548 NR_037450 100500878 NR_037450 miRBase:MI0016080 MIR3679 - microRNA 3679 ncRNA 0.008386 0.458159 138(AAGTGGCT,+,0.00) 127(GCTGAGGAGC,+,0.00) 561_WT_peak_3363 chr17 76164088 76164823 + 2759 NA promoter-TSS (NM_004710) promoter-TSS (NM_004710) -216 NM_004710 9144 Hs.464210 NM_004710 HPRD:04891 SYNGR2 - synaptogyrin 2 protein-coding 0.088435 0.709239 211(TGGCCCGGAGAC,+,0.00) 306(CTCGCCCGCC,-,0.00) 159(CCGTCTTCCCGG,+,0.00),551(CCGGGGAGGGCG,-,0.00),552(CGGGGAGGGCGG,-,0.00) 431(GGCGGCGA,-,0.00) 382(TCGGGCGG,-,0.00) 299(CCCGCGGC,-,0.00),366(CCCCCGGC,-,0.00) 348(TAGCGGCG,-,0.00) 128(GGGCAAAGAGGG,-,0.00) 464(GGCGCGGC,-,0.00) 420(GCGGCGGCAGCG,+,0.00),432(GCGGCGACGGCG,+,0.00),453(GCGGGGCCTACG,+,0.00),560(GCGGGCCGAGGG,+,0.00) 204(GCCGGCGTGGCC,+,0.00),467(GCGGCCAAGGCG,+,0.00),469(GGCCAAGGCGGG,-,0.00) 258(GCTCCGCGGC,-,0.00) 561_WT_peak_3500 chr18 47018565 47019557 + 2732 NA promoter-TSS (NM_000985) promoter-TSS (NM_000985) -126 NM_001199345 6139 Hs.293653 NM_000985 HPRD:04715 RPL17 L17|PD-1|RPL23 ribosomal protein L17 protein-coding 0.036290 0.485398 452(AAGTGGTT,+,0.00) 45(GGCGGCGA,-,0.00) -93(CCGACTGA,+,0.00) 605(TTTCCCCG,-,0.00) 114(GAAAGAGGAAGA,+,0.00) -61(CCGCCACG,-,0.00) 561_WT_peak_2449 chr15 43397781 43398550 + 2500 NA exon (NM_174916, exon 1 of 47) exon (NM_174916, exon 1 of 47) 121 NM_174916 197131 Hs.591121 NM_174916 HPRD:09342 UBR1 JBS ubiquitin protein ligase E3 component n-recognin 1 protein-coding 0.048114 0.515584 256(CCAGCCTCCTCG,+,0.00) 410(GCTTCCGGCCCG,-,0.00) -100(CTCGGCCCCC,-,0.00),264(CTCGTCCGCC,-,0.00) 103(AGCCGCCA,-,0.00),171(AGAGACTT,-,0.00) 418(CCCGCTTCCCGG,+,0.00) 338(CCGGTCGG,-,0.00) 307(CCCCCGGC,-,0.00) 437(CGTCACGA,-,0.00) 384(CGGGTTTG,-,0.00) -104(CCGCCTCG,-,0.00),598(CTTGTCGG,+,0.00) 561_WT_peak_1419 chr11 76493703 76494350 + 2405 NA promoter-TSS (NR_120561) promoter-TSS (NR_120561) 80 NR_120561 101928837 Hs.656851 NR_120561 LOC101928837 - uncharacterized LOC101928837 ncRNA 0.060278 0.595679 235(CGCGCAGGGGGA,-,0.00) 431(AGCCGCCA,-,0.00) 259(CCGGGATGCAGG,-,0.00) 416(CCCGCGGC,-,0.00),444(CGCCCGGC,-,0.00) 424(CGGCCCGA,-,0.00) 68(CAAAGAGGAAGC,+,0.00),263(GATGCAGGAAGC,+,0.00) 350(CTCAGGCTCCGC,-,0.00),364(GCGGGGCGCGCG,+,0.00),472(GCGGGGACCGGG,+,0.00) 414(GCCCCGCGGC,-,0.00) 457(GGAGCCTGGCTG,+,0.00) 561_WT_peak_4056 chr2 46768845 46769714 + 2218 NA promoter-TSS (NM_012249) promoter-TSS (NM_012249) -588 NM_012249 23433 Hs.709193 NM_012249 RHOQ ARHQ|HEL-S-42|RASL7A|TC10|TC10A ras homolog family member Q protein-coding 0.069045 0.608046 615(TCCTCCTCCTCC,+,0.00) 493(AGAGGCCT,-,0.00) -145(CCCCCGCC,-,0.00) 342(TTTACCCT,-,0.00) 107(CGGAGCCGACGG,+,0.00),567(CCCTCGGCTCCC,-,0.00) 631(CGCCCCTCCGCG,-,0.00) -41(CCGCCTCG,-,0.00) 673(GCCGGCAGGGCC,+,0.00) 561_WT_peak_6578 chr7 5084956 5085655 + 2159 NA promoter-TSS (NM_001204456) promoter-TSS (NM_001204456) -147 NM_001204513 100533952 Hs.396178 NM_001204513 ENSG00000272968 RBAK-RBAKDN RBAK-LOC389458 RBAK-RBAKDN readthrough protein-coding 0.061516 0.588571 287(GGCCCCGGAGGC,+,0.00) -142(CTCGGCCTCC,-,0.00) 62(AGAGGCCT,-,0.00) 235(CGCGTAGG,+,0.00) 67(CCTTGGGCTCCA,-,0.00) -103(ACCGCGCC,+,0.00) 449(GCGGAGCCTGCG,+,0.00) 211(AAAACGGCCC,-,0.00) -146(CCGCCTCG,-,0.00),491(CTAGGCGG,+,0.00) 358(GCGCCGCCGC,-,0.00) 84(CAGTCAGGCAGC,-,0.00) 561_WT_peak_1570 chr12 8085746 8086419 + 2156 NA intron (NM_006931, intron 2 of 9) intron (NM_006931, intron 2 of 9) 2810 NM_006931 6515 Hs.419240 NM_006931 HPRD:00686 SLC2A3 GLUT3 solute carrier family 2 (facilitated glucose transporter), member 3 protein-coding 0.010401 0.448071 482(GGCCTGGCACTC,-,0.00) 159(ACCGCCCA,+,0.00) 561_WT_peak_6745 chr7 90893379 90894050 + 2101 NA promoter-TSS (NM_003505) promoter-TSS (NM_003505) -69 NM_003505 8321 Hs.94234 NM_003505 HPRD:04558 FZD1 - frizzled class receptor 1 protein-coding 0.101341 0.656250 13(TCCTCCTCCTCC,+,0.00),23(CCCGCCTCCTCC,+,0.00),39(CCGCCCTCCTGC,+,0.00),293(GGCGCAGGGGGG,-,0.00) 183(GACTACGGGGCG,-,0.00),199(GAAACCGGTCCG,-,0.00) 272(GGCGGCGGAG,+,0.00) 95(CCGGGAAGCCGG,-,0.00),397(CCAGGAAGGCGG,-,0.00) 45(TCCTGCCG,+,0.00) 206(GTCCGAGG,-,0.00) 385(GCGAGCCGAGGG,+,0.00) 267(GCGGCGGCGGCG,+,0.00),365(GCGCCGCCAGCC,+,0.00),480(GCGGCGGCGGCG,+,0.00) 102(GCCGGAGCCGCG,+,0.00),361(CGCGGCGCCGCC,+,0.00),361(CGCGGCGCCGCC,-,0.00) 94(GCCGGGAAGC,+,0.00),320(GCTGCGGAGA,+,0.00) 561_WT_peak_4662 chr20 47444530 47445138 + 2010 NA promoter-TSS (NM_020820) promoter-TSS (NM_020820) -414 NM_020820 57580 Hs.153310 NM_020820 HPRD:06066 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding 0.152961 0.802956 -18(CTCGGCCGCA,-,0.00) 19(CTGGGGACGCGG,-,0.00),347(CCGGGAAGTCAG,-,0.00),413(CCGGGAACGCCG,-,0.00) 39(TCGGCGCC,+,0.00) -71(CGGCTGGCCCCC,-,0.00) 116(CGCGCACG,+,0.00),151(CGGACGCG,-,0.00) 47(TCCGTCGG,-,0.00),66(TCGGGCGG,-,0.00) -106(AGGGGCGGGA,-,0.00) -153(GCCGGGCG,+,0.00),-140(GCCGGGGG,+,0.00),-114(GCCGGGCG,+,0.00),-63(CCCCCGCC,-,0.00) 49(CGTCGGAA,+,0.00),105(GTCCGAGG,-,0.00) 29(GGCGCGGC,-,0.00) -145(GCTGGGCCGGGG,+,0.00),-133(GCGGAGGCAGCG,+,0.00),-114(GCCGGGCGAGGG,+,0.00),-70(GGCTGGCCCCCC,-,0.00),-62(CCCCGCCCCCGC,-,0.00) 26(CGCGGCGCGGCG,+,0.00),26(CGCGGCGCGGCG,-,0.00),92(CGCGGAGCCGGG,+,0.00),296(TGCGGAGCCGCT,+,0.00),332(CGCGCCTCCGCG,-,0.00),340(CGCGGCCCCGGG,-,0.00) 324(CCGCCACG,-,0.00) 294(GCTGCGGAGC,+,0.00) 561_WT_peak_2934 chr16 87328867 87329300 + 1711 NA Intergenic Intergenic -3025 NR_104667 101928682 Hs.149004 NR_104667 LOC101928682 - uncharacterized LOC101928682 ncRNA 0.009238 0.467742 -31(GAAACAGACAGC,+,0.00) 561_WT_peak_4878 chr22 30819942 30820782 + 1664 NA 3' UTR (NM_001204204, exon 10 of 10) 3' UTR (NM_001204204, exon 10 of 10) -1249 NM_016498 51537 Hs.713636 NM_016498 HPRD:17612 MTFP1 MTP18 mitochondrial fission process 1 protein-coding 0.048810 0.555291 659(AGAGACTT,-,0.00) 147(TCCACGCC,+,0.00) 20(ACGTGCCG,+,0.00) 306(GGGCTGAAAGCG,-,0.00) 639(TATACCCG,-,0.00) 98(GGGAGGCGGAGG,+,0.00) 25(CCGCGTAG,-,0.00),644(CCGCCAAG,-,0.00) 66(CCTGCGGAGC,+,0.00) 561_WT_peak_6584 chr7 6746490 6747276 + 1646 NA promoter-TSS (NM_016265) promoter-TSS (NM_016265) -317 NM_016265 7559 Hs.431471 NM_006956 HPRD:11835 ZNF12 GIOT-3|HZF11|KOX3|ZNF325 zinc finger protein 12 protein-coding 0.047074 0.498094 228(AAGTCTCT,+,0.00) -5(CCGCCTCCCGGG,+,0.00),275(CTGCCTTACCGG,+,0.00) 55(CCTACGCG,-,0.00) 236(GCTTCCTGTAGC,-,0.00) 561_WT_peak_3069 chr17 19091168 19093753 + 1633 NA Intergenic L1MC|LINE|L1 -30235 NM_001291904 79999 Hs.677375 NM_024934 LOC79999 - uncharacterized LOC79999 protein-coding 0.055706 0.515081 492(GTCTCCGGGTCT,-,0.00),1720(AGACCCGGAGAC,+,0.00) 742(CTCGGCCTCC,-,0.00),876(CTCGGCCTCC,-,0.00),1338(GGAGGCCGAG,+,0.00),1472(GGAGGCCGAG,+,0.00) 921(CCGACTGA,+,0.00) 383(GGCGGGGG,+,0.00),1833(CCCCCGCC,-,0.00) 1042(TCGTGCCT,+,0.00) 1001(CAGCTTCTTCTG,-,0.00) 809(TAGCGACG,-,0.00),1407(CGTCGCTA,+,0.00) 181(GGAGTGAGAGGG,-,0.00),2031(CCCTCTCACTCC,+,0.00) 313(GCCTCCTGTTTC,-,0.00),1899(GAAACAGGAGGC,+,0.00) 914(ACCGCGCC,+,0.00) 515(TGCCGGCCCCGG,-,0.00),1697(CCGGGGCCGGCA,+,0.00) 380(CGAGGCGG,+,0.00),605(CCGAGTAG,-,0.00),738(CCGCCTCG,-,0.00),872(CCGCCTCG,-,0.00),1344(CGAGGCGG,+,0.00),1611(CTACTCGG,+,0.00),1836(CCGCCTCG,-,0.00) 561_WT_peak_4879 chr22 30821303 30822073 + 1624 NA promoter-TSS (NM_016498) promoter-TSS (NM_016498) 77 NM_001003704 51537 Hs.713636 NM_016498 HPRD:17612 MTFP1 MTP18 mitochondrial fission process 1 protein-coding 0.072727 0.596628 550(GGAGGAGGCGGG,-,0.00) 587(TGGGCCGGAGAC,+,0.00) 338(GGCGGCGGAG,+,0.00) 415(GCCGCGGG,+,0.00) -94(TAGAGACG,-,0.00) 527(CGCCGGAC,+,0.00) 134(CAAAACCT,+,0.00) 235(TGCGCGGG,-,0.00),485(GGCGCGGC,-,0.00) 386(CGTGGCGG,+,0.00) 383(GGCCGTGGCGGG,-,0.00) 415(GCCGCGGGGC,+,0.00) 561_WT_peak_2908 chr16 75182052 75182553 + 1621 NA promoter-TSS (NM_153688) promoter-TSS (NM_153688) -119 NM_153688 162239 Hs.388813 NM_153688 HPRD:15724 ZFP1 ZNF475 ZFP1 zinc finger protein protein-coding 0.065868 0.551793 266(CCGCCCTGCGCC,+,0.00) 84(GGCCCCGGAGGC,+,0.00) 263(TCGCCGCC,+,0.00) 23(TTGGTCGG,-,0.00) 246(CCCGTCTCCGCG,-,0.00) 265(GCCGCCCTGCGC,+,0.00) 561_WT_peak_3066 chr17 18965036 18966318 + 1617 NA Intergenic CpG -15341 NM_006613 10750 Hs.567416 NM_006613 GRAP - GRB2-related adaptor protein protein-coding 0.056942 0.509743 282(AACTCCGGGCCG,-,0.00),293(GTTTCCGGGCTG,-,0.00),522(GTCTCCGGGTCT,-,0.00) 773(CTCGGCCTCC,-,0.00),907(CTCGGCCTCC,-,0.00) 952(CCGACTGA,+,0.00) 413(GGCGGGGG,+,0.00) 1073(TCGTGCCT,+,0.00) 1032(CAGCTTCTTCTG,-,0.00) 840(TAGCGACG,-,0.00) 209(GGAGTGAGAGGG,-,0.00) 342(GCCTCCTGTTTC,-,0.00) 945(ACCGCGCC,+,0.00) 545(TGCCGGCCCCGG,-,0.00) 410(CGAGGCGG,+,0.00),635(CCGAGTAG,-,0.00),769(CCGCCTCG,-,0.00),903(CCGCCTCG,-,0.00) 561_WT_peak_472 chr1 148241431 148242227 + 1611 NA intron (NR_102404, intron 6 of 18).2 intron (NR_102404, intron 6 of 18).2 -39293 NM_001164261 645142 Hs.730589 NM_001164261 ENSG00000256374 PPIAL4D - peptidylprolyl isomerase A (cyclophilin A)-like 4D protein-coding 0.042714 0.499373 17(CGTTCGCG,-,0.00) 291(AGGGTCGGGA,-,0.00) 488(CCGAGTAG,-,0.00) 561_WT_peak_6731 chr7 76178132 76178690 + 1554 NA promoter-TSS (NR_029411) promoter-TSS (NR_029411) -247 NR_029411 100133091 Hs.712837 NR_029411 ENSG00000205485 LOC100133091 - uncharacterized LOC100133091 ncRNA 0.051971 0.552773 258(CCGGGGAGGCGG,-,0.00) 202(CGCGTAGG,+,0.00),320(CGCGTGCG,+,0.00) -134(ACCGCGCC,+,0.00) 55(AACGCAGCCC,-,0.00) 561_WT_peak_2306 chr14 77647628 77648276 + 1504 NA promoter-TSS (NM_020431) promoter-TSS (NM_020431) -150 NM_020431 57156 Hs.22452 NM_020431 HPRD:16617 TMEM63C C14orf171|CSC1|hsCSC1 transmembrane protein 63C protein-coding 0.041667 0.639445 77(GGGACCGGCAGC,+,0.00) -123(AGCCACTA,-,0.00) 324(CCGGCGAGGAGG,-,0.00) 415(GGGCTGGGGCCG,-,0.00) 163(CGCGTAGG,+,0.00) 128(TAGCGACA,-,0.00) 147(GCGGAGCCTGGG,+,0.00),214(GCGGGGCCAAGG,+,0.00),416(GGCTGGGGCCGC,-,0.00) 421(GGGCCGCGGT,+,0.00) 30(GCTGCCAAGGCC,+,0.00) 386(GCAGCCTGGCGG,+,0.00),387(CAGCCTGGCGGC,-,0.00) 561_WT_peak_3068 chr17 19014540 19016129 + 1486 NA Intergenic AluSx|SINE|Alu -15448 NM_001129778 400581 Hs.661470 NM_001129778 GRAPL - GRB2-related adaptor protein-like protein-coding 0.058527 0.529560 738(AGACCCGGAGAC,+,0.00),966(CAGCCCGGAAAC,+,0.00),977(CGGCCCGGAGTT,+,0.00) 372(GGAGGCCGAG,+,0.00),506(GGAGGCCGAG,+,0.00) 329(TCAGTCGG,-,0.00) 851(CCCCCGCC,-,0.00) 208(AGGCACGA,-,0.00) 245(CAGAAGAAGCTG,+,0.00) 441(CGTCGCTA,+,0.00) 1050(CCCTCTCACTCC,+,0.00) 917(GAAACAGGAGGC,+,0.00) 336(GGCGCGGT,-,0.00) -119(CGGCGGCTCCGC,-,0.00),715(CCGGGGCCGGCA,+,0.00) -118(GGCGGCTCCGCG,-,0.00) 378(CGAGGCGG,+,0.00),512(CGAGGCGG,+,0.00),629(CTACTCGG,+,0.00),854(CCGCCTCG,-,0.00) 561_WT_peak_6702 chr7 72349434 72350037 + 1477 NA promoter-TSS (NM_001257190) promoter-TSS (NM_001257190) -171 NM_001257190 9883 Hs.655217 NM_172020 HPRD:11448 POM121 P145|POM121A POM121 transmembrane nucleoporin protein-coding 0.049751 0.556291 177(CGCGTAGG,+,0.00),296(CGCGTGCG,+,0.00) 30(AACGCAGCCC,-,0.00) 561_WT_peak_6723 chr7 75115488 75116019 + 1316 NA promoter-TSS (NM_001099415) promoter-TSS (NM_001099415) -188 NM_001099415 100101267 Hs.712563 NM_001099415 ENSG00000135213 POM121C POM121-2 POM121 transmembrane nucleoporin C protein-coding 0.047081 0.556391 -5(CCGCCTCCCGGG,+,0.00) 56(CCTACGCG,-,0.00) 70(CAGTTTTG,-,0.00) -96(GGCACAGGAAGC,+,0.00) 561_WT_peak_284 chr1 67895596 67896597 + 1256 NA promoter-TSS (NM_015640) promoter-TSS (NM_015640) 27 NM_001018069 26135 Hs.530412 NM_015640 ENSG00000142864 SERBP1 CHD3IP|HABP4L|PAI-RBP1|PAIRBP1 SERPINE1 mRNA binding protein 1 protein-coding 0.080919 0.636727 366(AGCGGCCT,-,0.00) 758(CGGGGGAGGGGG,-,0.00) 176(TCGGTTGG,-,0.00) 93(CCCCCGCC,-,0.00),791(GCCGCGGG,+,0.00) 314(GGGCCGAGAGAG,-,0.00) 617(AAAAACCG,+,0.00) 102(GCTTCTTTTTTC,-,0.00) 10(TGCGCAGC,-,0.00),265(GCCGCGCC,+,0.00),782(GCCGCGCC,+,0.00) 88(CGCCGCCCCCGC,-,0.00),786(CGCCGGCCGCGG,-,0.00) 86(AACGCCGCCC,-,0.00),263(GGGCCGCGCC,+,0.00),550(GGGCGGAGTC,+,0.00) 431(CCGCGTCG,-,0.00) -31(GCTGGGGGGC,+,0.00) 561_WT_peak_6582 chr7 6143927 6144522 + 1253 NA promoter-TSS (NM_032172) promoter-TSS (NM_032172) -326 NM_032172 84132 Hs.31856 NM_032172 ENSG00000106346 USP42 - ubiquitin specific peptidase 42 protein-coding 0.124370 0.691275 416(CGGCCCGGAGGG,+,0.00) -129(CTCGGCCTCC,-,0.00) 306(GGCGACGA,-,0.00) 383(CGCGTTCG,+,0.00) 255(CCGACCGG,+,0.00) -88(CGCCCGGC,-,0.00),409(CCCCCGGC,-,0.00) 251(CGGCCCGA,-,0.00) 135(GTCCTACG,-,0.00),360(GTGCGACG,-,0.00) -92(ACCGCGCC,+,0.00),373(TGGGCGGC,-,0.00),391(GGCGCGGC,-,0.00) 141(CGCCCGCCGCGC,-,0.00) 205(CGCGCAGACGCG,+,0.00) 391(GGCGCGGCCC,-,0.00) -133(CCGCCTCG,-,0.00) 394(GCGGCCCTGGCG,+,0.00),396(GGCCCTGGCGCG,-,0.00) 376(GCGGCGGCGC,+,0.00) 561_WT_peak_51 chr1 9748909 9749553 + 1240 NA intron (NM_005026, intron 1 of 23) intron (NM_005026, intron 1 of 23) -34587 NR_027045 644997 Hs.568595 NM_001045478 ENSG00000179840 C1orf200 - chromosome 1 open reading frame 200 ncRNA 0.077640 0.627907 358(CTCCGCCGCC,-,0.00) 446(CCGCCCCAGCCC,+,0.00) 223(CGTGCGCG,-,0.00) 243(CCCGCGGC,-,0.00) 381(GCGCTTCTCCCG,-,0.00) -129(CGGTGTTG,-,0.00) 124(GGGAGCGGAAAG,+,0.00) 432(CGCCGGCCCCGG,-,0.00),438(CCCCGGCCCCGC,-,0.00) 287(GCCTGGCAGC,-,0.00),425(GCGCCGCCGC,-,0.00) 561_WT_peak_78 chr1 16839982 16841021 + 1228 NA Intergenic Intergenic -21305 NR_023386 114819 Hs.597881 NR_023386 ENSG00000080947 CROCCP3 CROCCL2|dJ798A10.2 ciliary rootlet coiled-coil, rootletin pseudogene 3 pseudo 0.046198 0.542308 481(CGCGAACG,+,0.00) 800(TCGTGGCG,+,0.00) -116(CGGTTCTG,-,0.00),292(CAAAGCCG,+,0.00) 701(CCCGCGCA,+,0.00) -137(CCGCCAAG,-,0.00) 561_WT_peak_3192 chr17 41437417 41438932 + 1227 NA Intergenic Intergenic 28092 NR_027412 100130581 Hs.546897 NR_027412 ENSG00000188825 LINC00910 - long intergenic non-protein coding RNA 910 ncRNA 0.052805 0.459763 1027(AGACGCTA,-,0.00) 296(CGTACCCG,-,0.00),864(GGTACGCG,-,0.00) 724(CGCCCGGC,-,0.00) 290(TAGTGACG,-,0.00),1014(TAGCGACA,-,0.00) 434(GTCCGACT,-,0.00),767(ATCCGACG,-,0.00) 1131(CAACACCG,+,0.00) 923(CGTGTAAA,+,0.00) 693(GAAACCGAAAGC,+,0.00) 561_WT_peak_1322 chr11 62607752 62609437 + 1213 NA promoter-TSS (NM_018093) promoter-TSS (NM_018093) -966 NM_018093 54663 Hs.654620 NM_018093 HPRD:08548 WDR74 - WD repeat domain 74 protein-coding 0.049258 0.478055 500(GGAGGCCGAG,+,0.00),1383(CTCGGCGGCC,-,0.00) 150(AAGTCGCT,+,0.00),1506(TAGTGGCT,+,0.00) -39(CCCGGGAGGAGG,-,0.00),795(CCCGGGAGGCGG,-,0.00) 277(GAGCGCCCGCCA,+,0.00) 1375(TCGGTCGC,-,0.00) -107(GCCGGGCG,+,0.00),460(GCCGGGCG,+,0.00),594(GCCGGGCG,+,0.00),910(GCCGGGGG,+,0.00) -138(CGTCTCTA,+,0.00),151(AGTCGCTA,+,0.00),701(CGTCTCTA,+,0.00) 586(CAAAACAG,+,0.00),1018(CAAAACCT,+,0.00) 464(GGCGCGGT,-,0.00),598(GGCGCGGT,-,0.00) 506(CGAGGCGG,+,0.00),1354(CCGAGAAG,-,0.00) 561_WT_peak_5778 chr5 66110305 66110646 + 1186 NA intron (NM_198828, intron 3 of 5) intron (NM_198828, intron 3 of 5) -14129 NM_015183 375449 Hs.595458 NM_015183 HPRD:14195 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding 0.005865 0.394737 561_WT_peak_3457 chr18 19320660 19321163 + 1173 NA promoter-TSS (NM_020774) promoter-TSS (NM_020774) -379 NM_020774 57534 Hs.140903 NM_020774 HPRD:06660 MIB1 DIP-1|DIP1|LVNC7|MIB|ZZANK2|ZZZ6 mindbomb E3 ubiquitin protein ligase 1 protein-coding 0.103380 0.716270 -57(AGACGCTT,-,0.00) 218(CGGGGGAGGAGG,-,0.00) 256(CCGAGCGA,+,0.00) -148(GCCCGCCCCT,+,0.00) 103(CGCCCGGC,-,0.00),329(CCCCCGGC,-,0.00) 186(CGCCGGAC,+,0.00) -154(CCCTGGGCCCGC,-,0.00),147(GCGGGGGCAGAG,+,0.00),229(GCGGCGCCGGCG,+,0.00) -162(GGATCCGCCC,-,0.00) 561_WT_peak_4727 chr20 62587724 62588098 + 1164 NA promoter-TSS (NM_017859) promoter-TSS (NM_017859) -111 NM_017859 54963 Hs.504998 NM_017859 HPRD:15607 UCKL1 UCK1-LIKE|UCK1L|URKL1 uridine-cytidine kinase 1-like 1 protein-coding 0.112299 0.656000 -153(AGGCCTCT,+,0.00) -134(GCCGGGCG,+,0.00) -53(CGTCGCGG,+,0.00),-22(CGTCGCGG,+,0.00),9(CGTCGCGG,+,0.00),40(CGTCGCGG,+,0.00),105(CCGCCACG,-,0.00) -142(CGGGCCTGGCCG,+,0.00) 561_WT_peak_483 chr1 149223441 149224848 + 1161 NA Intergenic U1|snRNA|snRNA -62986 NR_111933 388692 Hs.271249 NM_001013644 LOC388692 - uncharacterized LOC388692 ncRNA 0.051173 0.546875 986(CGCCCCGGCATC,+,0.00),1129(GAAACCGGTTCT,-,0.00) 329(AGCGACAT,-,0.00),1186(AAGCCGTT,+,0.00),1228(AGAGGCTT,-,0.00) -77(CCGGGAGAGCCG,-,0.00) -110(GGCCTCGA,-,0.00) 463(CGCGAACG,+,0.00) 25(CCCCCGCC,-,0.00) 781(CGGCACGG,-,0.00),797(TCGTGGCG,+,0.00) 1007(CCGAAGAAGCTG,+,0.00) 683(CCCGCGCAGCCC,+,0.00),707(CCCCCCCAGCCC,+,0.00),716(CCCTCCTAGCCC,+,0.00) 751(GTCCGACC,-,0.00) -125(CGGTTTTG,-,0.00) 1178(GAAATTGGAAGC,+,0.00) 683(CCCGCGCA,+,0.00) 230(AAAGCAGCCC,-,0.00) 239(CCGCCTAG,-,0.00) 1032(GCTGCGGAGC,+,0.00) 561_WT_peak_3067 chr17 18966518 18967637 + 1159 NA Intergenic CpG -16741 NM_006613 10750 Hs.567416 NM_006613 GRAP - GRB2-related adaptor protein protein-coding 0.062556 0.532143 260(AGACCCGGAGAC,+,0.00) -113(GGAGGCCGAG,+,0.00),21(GGAGGCCGAG,+,0.00) 373(CCCCCGCC,-,0.00) -44(CGTCGCTA,+,0.00) 572(CCCTCTCACTCC,+,0.00) 439(GAAACAGGAGGC,+,0.00) -107(CGAGGCGG,+,0.00),152(CTACTCGG,+,0.00),376(CCGCCTCG,-,0.00) 561_WT_peak_1591 chr12 10561992 10562373 + 1079 NA 5' UTR (NM_013431, exon 1 of 4) 5' UTR (NM_013431, exon 1 of 4) 174 NM_013431 8302 Hs.721094 NM_013431 HPRD:16008 KLRC4 NKG2-F|NKG2F killer cell lectin-like receptor subfamily C, member 4 protein-coding 0.002625 0.392670 561_WT_peak_500 chr1 149857094 149859573 + 1063 NA promoter-TSS (NM_003517) promoter-TSS (NM_003517) -101 NM_003528 8349 Hs.2178 NM_003528 HPRD:03494 HIST2H2BE GL105|H2B|H2B.1|H2BFQ|H2BGL105|H2BQ histone cluster 2, H2be protein-coding 0.065349 0.539113 -28(GGACCCGGCTGC,+,0.00) 165(AGCCACTT,-,0.00),698(AAGCCTCT,+,0.00),1805(AAGCCTCT,+,0.00) 2294(CCGGGAGGGGTG,-,0.00) 529(GAGCGCCAGGTC,+,0.00),1400(GGGCCGGCGCGC,-,0.00),2064(GGGCGCCTGCCC,+,0.00) 1081(TGCGTACG,+,0.00) 848(TCTTGCCG,+,0.00),1321(TCGTCCCG,+,0.00),2147(CGGGACGA,-,0.00) 590(CCTCGGAC,+,0.00) 1092(CAACACCG,+,0.00),1118(CGGTTCTG,-,0.00),1623(GAAAACCG,+,0.00) 233(CGGGTAAA,+,0.00),2211(CGGCTAAA,+,0.00) -19(TGCGCGGC,-,0.00),1368(GCTGCGCA,+,0.00),2100(TGCGCAGC,-,0.00) 1318(CGCTCGTCCCGC,-,0.00),2146(GCGGGACGAGCG,+,0.00) -25(CCCGGCTGCGCG,-,0.00) 1471(AACGCGGCTC,-,0.00),1581(GGGCGGCGTT,+,0.00),1885(GACGCCGCCC,-,0.00),1995(GAGCCGCGTT,+,0.00) 1383(CTACGCGG,+,0.00),2085(CCGCGTAG,-,0.00) 1300(CGCGCCAAGGCC,+,0.00),1416(CTACATGGCGGC,-,0.00),1576(GCCCAGGGCGGC,-,0.00),1888(GCCGCCCTGGGC,+,0.00) -21(GCTGCGCGGC,+,0.00),70(GCTGCCAAGC,+,0.00) 561_WT_peak_566 chr1 156736892 156737738 + 1049 NA promoter-TSS (NM_005973) promoter-TSS (NM_005973) 41 NM_005973 5546 Hs.516948 NM_005973 HPRD:01562 PRCC RCCP1|TPRC papillary renal cell carcinoma (translocation-associated) protein-coding 0.063830 0.595041 249(GGAGGAGGCGGA,-,0.00),385(GGAGCAGGCGGA,-,0.00) 438(GCCTCCGGGCAT,-,0.00) 265(CTCGGCGGCC,-,0.00) 508(ATGTCGCT,+,0.00) 53(GGCGACGA,-,0.00) 569(CGGAGGAAGAGG,+,0.00) 140(CCTCGGAC,+,0.00) 602(GGCCCGCTTT,+,0.00) 502(GGCGCCATGTCG,+,0.00) 649(CCGGCCTTGCTG,+,0.00) 561_WT_peak_1562 chr12 6961318 6961917 + 1045 NA promoter-TSS (NM_001297603) promoter-TSS (NM_001297603) 326 NM_003481 8078 Hs.631661 NM_003481 HPRD:03265 USP5 ISOT ubiquitin specific peptidase 5 (isopeptidase T) protein-coding 0.081803 0.626667 149(GTCCCCGGAAGC,+,0.00) 177(CCGGCTCCCCGC,+,0.00) 321(CGCGCACG,+,0.00) 257(CCGACCGT,+,0.00),385(TCGGCCGG,-,0.00) -101(TACCGACG,-,0.00) 262(CGTCGGAC,+,0.00) 336(GGGTTTTG,-,0.00) 174(TCTCCGGCTCCC,-,0.00) 319(GCCGCGCA,+,0.00) 424(CTAGGCGG,+,0.00) 561_WT_peak_4171 chr2 85788684 85789125 + 1041 NA promoter-TSS (NM_001142269) promoter-TSS (NM_001142269) -247 NM_000821 2677 Hs.77719 NM_000821 HPRD:00665 GGCX VKCFD1 gamma-glutamyl carboxylase protein-coding 0.058957 0.574661 -141(GGCGCCGGATTC,+,0.00) -72(TAGTGCCG,+,0.00) 169(GGGTTTTG,-,0.00) -125(CTTGGCGG,+,0.00) 561_WT_peak_2169 chr14 35024826 35025788 + 1034 NA Intergenic CpG -16364 NM_018453 55837 Hs.433269 NM_018453 HPRD:12631 EAPP BM036|C14orf11 E2F-associated phosphoprotein protein-coding 0.060291 0.571132 678(CGGCCCCAGCCC,+,0.00) 76(CCCGTACG,+,0.00),452(CGCGAACG,+,0.00) 221(TCGTGACG,+,0.00),673(TCGTGCGG,+,0.00) 194(CGGCTTTG,-,0.00),333(CAAAAACG,+,0.00) 677(GCGGCCCCAGCC,+,0.00) -49(GCTGCCTGGGTG,+,0.00) 561_WT_peak_5027 chr3 16883557 16884955 + 1023 NA Intergenic Intergenic -42196 NM_001144382 23228 Hs.741267 NM_015184 HPRD:07147 PLCL2 PLCE2 phospholipase C-like 2 protein-coding 0.012876 0.475340 335(AGGTGGCT,+,0.00),404(AGGTGGCT,+,0.00),679(AGACACCT,-,0.00) 356(GAGGGCCCGCCC,+,0.00) 1138(GGGTTTTG,-,0.00) -27(GGGGTAAA,+,0.00) 65(GAAACAAGAAGC,+,0.00) 137(GGCCGGCCCAGC,-,0.00) 561_WT_peak_4615 chr20 34329314 34330951 + 1007 NA non-coding (NR_040722, exon 1 of 18) non-coding (NR_040722, exon 1 of 18) 126 NM_001242599 9584 Hs.282901 NM_004902 HPRD:09201 RBM39 CAPER|CAPERalpha|FSAP59|HCC1|RNPC2 RNA binding motif protein 39 protein-coding 0.060476 0.547009 896(TCCCCCTCCGCG,+,0.00) 281(CCCCCACCCCGG,+,0.00) 149(GGCCTCGA,-,0.00),640(AGCGTCGA,-,0.00) 904(CGCGTAAG,+,0.00) 12(CCGAACGA,+,0.00) 1024(TCGTGGCG,+,0.00) 668(CCGCTGCTTCCC,-,0.00),754(CGCGAGAAGCTG,+,0.00) 291(GGTCGCTA,+,0.00) 314(GCCCCTCAGCCC,+,0.00) 307(CAAAAGCG,+,0.00),1391(CAGTTTTG,-,0.00) 33(CGGGCAAA,+,0.00),220(TATACCCG,-,0.00) 241(GGCGCGGT,-,0.00),508(ACCGCCCA,+,0.00),1289(GGCGCGGC,-,0.00) 456(CGCCGCCGCCGC,-,0.00) 362(CGCGGGTCCGCA,-,0.00),502(CGCGGAACCGCC,+,0.00) 259(GGGCCGATTT,+,0.00),309(AAAGCGCCCC,-,0.00) 561_WT_peak_469 chr1 147994074 147995051 + 985 NA TTS (NR_104086) TTS (NR_104086) 416 NR_104086 101954277 NR_104086 RNVU1-19 RNU1-126|RNU1-147|RNVU1-13|vU1.13|vU1.19 RNA, variant U1 small nuclear 19 snRNA 0.041965 0.506135 58(CGTTCGCG,-,0.00) 332(AGGGTCGGGA,-,0.00) -145(CGTGTAAA,+,0.00) 528(CCGAGTAG,-,0.00) 561_WT_peak_487 chr1 149513419 149514380 + 962 NA TTS (NR_104086).2 TTS (NR_104086).2 357 NR_104086 101954277 NR_104086 RNVU1-19 RNU1-126|RNU1-147|RNVU1-13|vU1.13|vU1.19 RNA, variant U1 small nuclear 19 snRNA 0.042664 0.527027 517(CGCGAACG,+,0.00) 241(TCCCGACCCT,+,0.00) 758(CCCCCCCAGCCC,+,0.00),767(CCCTCCTAGCCC,+,0.00) 719(TTTACACG,-,0.00) 740(CCCGCGCA,+,0.00) 47(CTACTCGG,+,0.00) 561_WT_peak_82 chr1 17222264 17223410 + 957 NA Intergenic Intergenic -25608 NM_014675 9696 Hs.309403 NM_014675 HPRD:16758 CROCC ROLT ciliary rootlet coiled-coil, rootletin protein-coding 0.046248 0.536181 193(CGTTCGCG,-,0.00) -125(CGCCACGA,-,0.00) 381(CGGCTTTG,-,0.00),792(CAGAACCG,+,0.00) 504(TCTTCCTGTTTT,-,0.00),944(GCTTCTTGTTTG,-,0.00) -27(TGCGCGGG,-,0.00) 813(CTTGGCGG,+,0.00) 561_WT_peak_4472 chr2 219264210 219264998 + 953 NA 5' UTR (NM_182642, exon 1 of 7) 5' UTR (NM_182642, exon 1 of 7) 126 NM_182642 58190 Hs.444468 NM_021198 HPRD:05615 CTDSP1 NIF3|NLI-IF|NLIIF|SCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 protein-coding 0.111675 0.738910 278(TCCCCCTCCCCC,+,0.00),522(GGAGGGGGCCGA,-,0.00) 366(GATTCCGGCCCC,-,0.00),532(GAAGCCGGGGCG,-,0.00) -34(CTCGGCGGCC,-,0.00),448(CTCGGCCGTC,-,0.00) -139(AAGCCTCT,+,0.00),163(AAGCCGTT,+,0.00) -62(CCCGGCGGGCGG,-,0.00),349(CCTCCCCCCCGC,+,0.00),380(CCGGGGGGGAGG,-,0.00),518(GCGGGGAGGGGG,-,0.00),591(CCGCCGCCCCGG,+,0.00) 53(GCGACGCC,+,0.00) 84(GCCCGGCCCG,+,0.00),560(GGGGCCGGGA,-,0.00) 379(GCCGGGGG,+,0.00),391(GCCGGGCG,+,0.00),429(CGCCCGGC,-,0.00) 39(CGGCAGGA,-,0.00),71(CGGCAGGA,-,0.00) 334(CCCTCCCACCCC,+,0.00) 525(GGGGGCCGAAGC,+,0.00) -99(GCCGCGCC,+,0.00),110(GCCGCGCC,+,0.00) 586(CGCCGCCGCCGC,-,0.00) -105(GGTGGAGCCGCG,+,0.00),104(CGCCTAGCCGCG,+,0.00) 78(AACCCGGCCC,-,0.00) -144(CCGAGAAG,-,0.00),103(CCGCCTAG,-,0.00),221(CCGCCTCG,-,0.00) 3(GCCACGCAGC,-,0.00),493(GCTGCGGGGC,+,0.00) 561_WT_peak_81 chr1 17066741 17067918 + 937 NA Intergenic Intergenic -6373 NM_001282321 729574 NM_001282321 ENSG00000237847 FAM231A FAM231C family with sequence similarity 231, member A protein-coding 0.046729 0.540747 977(AAGCGACT,+,0.00) 252(CGTTCGCG,-,0.00),295(CGTACGCC,-,0.00) -66(CGCCACGA,-,0.00) 427(CGGCTTTG,-,0.00),838(CAGAACCG,+,0.00) 985(GCTTCATGTTTG,-,0.00) 32(TGCGCGGG,-,0.00) 859(CTTGGCGG,+,0.00) 561_WT_peak_3587 chr19 4791408 4791985 + 920 NA promoter-TSS (NM_018708) promoter-TSS (NM_018708) -32 NM_018708 55527 Hs.515082 NM_018708 HPRD:16888 FEM1A EPRAP fem-1 homolog a (C. elegans) protein-coding 0.093588 0.638408 190(GGCGGCGA,-,0.00) 140(TCCGTCGG,-,0.00),168(CCGCCCGA,+,0.00) 255(CCCCCGGC,-,0.00) -128(TAGCCACG,-,0.00) 240(CCTCCGTCTCCC,-,0.00) 104(CCCGCGCA,+,0.00) 319(AACGCCGCCC,-,0.00) 561_WT_peak_941 chr10 32635205 32636192 + 905 NA promoter-TSS (NR_104163) promoter-TSS (NR_104163) 278 NM_001272019 80314 Hs.167805 NM_025209 HPRD:09941 EPC1 Epl1 enhancer of polycomb homolog 1 (Drosophila) protein-coding 0.105370 0.690283 149(GGCGGCCGGG,+,0.00),252(CTCCGCCGCC,-,0.00) -85(AGAGGCCT,-,0.00),425(AGCGGCTT,-,0.00),435(AGGCGTCT,+,0.00) -154(CTGCGCTCCCGG,+,0.00),624(CCGGGAGGGTGG,-,0.00),768(GCGGGCACGCGG,-,0.00) 157(GGGGTCGA,-,0.00),209(GGCGGCGA,-,0.00),428(GGCTTCGA,-,0.00),436(GGCGTCTA,-,0.00),801(TCGAGGCC,+,0.00) -108(GAGCGCCACCCA,+,0.00) 294(TGGGTCGG,-,0.00) -148(TCCCGGCCCG,+,0.00) 153(GCCGGGGG,+,0.00),779(GGCGGGGG,+,0.00) 358(CGGCACGG,-,0.00),386(TCGTGCAG,+,0.00),814(CGGCACGA,-,0.00) 296(GGTCGGAC,+,0.00) 415(GAAAACCG,+,0.00) 93(CGGGTACA,+,0.00) 255(CGCCGCCGCCGC,-,0.00) 138(CGCTGGGCCGCG,+,0.00),757(CGCGCAGCGGCG,+,0.00) -55(CCGACTCG,-,0.00) 143(GGCCGCGGCGGC,-,0.00),678(TACGCCATGGCC,+,0.00) 251(GCTCCGCCGC,-,0.00) -130(CGCGCAGGCCGC,-,0.00),131(GGGGCCCCGCTG,+,0.00) 561_WT_peak_80 chr1 16992605 16993665 + 904 NA Intergenic Intergenic -6363 NM_001282321 729574 NM_001282321 ENSG00000237847 FAM231A FAM231C family with sequence similarity 231, member A protein-coding 0.047170 0.546654 478(GGCGTACG,+,0.00),521(CGCGAACG,+,0.00) 839(TCGTGGCG,+,0.00) -65(CGGTTCTG,-,0.00),346(CAAAGCCG,+,0.00) 741(CCCGCGCA,+,0.00) -86(CCGCCAAG,-,0.00) 561_WT_peak_2168 chr14 35015739 35016804 + 895 NA Intergenic CpG -7328 NM_018453 55837 Hs.433269 NM_018453 HPRD:12631 EAPP BM036|C14orf11 E2F-associated phosphoprotein protein-coding 0.059155 0.570356 -67(GGGCTGGGGCCG,-,0.00) 163(CGTTCGCG,-,0.00),539(CGTACGGG,-,0.00) -58(CCGCACGA,-,0.00),394(CGTCACGA,-,0.00) 804(CCTCGCTA,+,0.00) 282(CGTTTTTG,-,0.00),421(CAAAGCCG,+,0.00) -66(GGCTGGGGCCGC,-,0.00) 660(CACCCAGGCAGC,-,0.00) 561_WT_peak_297 chr1 78469712 78470403 + 888 NA promoter-TSS (NM_007034) promoter-TSS (NM_007034) -579 NM_007034 11080 Hs.13852 NM_007034 DNAJB4 DNAJW|DjB4|HLJ1 DnaJ (Hsp40) homolog, subfamily B, member 4 protein-coding 0.010130 0.339595 561_WT_peak_6928 chr8 9413360 9414038 + 861 NA exon (NM_003747, exon 1 of 27) exon (NM_003747, exon 1 of 27) 254 NM_003747 8658 Hs.370267 NM_003747 HPRD:04490 TNKS ARTD5|PARP-5a|PARP5A|PARPL|TIN1|TINF1|TNKS1|pART5 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase protein-coding 0.081121 0.684831 76(AGCGGCCT,-,0.00) 92(TCGCCTCCCCGC,+,0.00) -69(GGCGTCGC,-,0.00),221(TCGCCGCC,+,0.00) -26(CAGCTCCAGCCC,+,0.00) 145(CCGCCCGA,+,0.00) 99(CCCGCGGC,-,0.00) 103(CGGCACGG,-,0.00) 317(CCTCTTCTTCCC,-,0.00) -62(CGTCGCTC,+,0.00) 24(CCCACTCAGCCC,+,0.00) -145(GTCCGACA,-,0.00),-82(GTCCGAAG,-,0.00) 89(CCTTCGCCTCCC,-,0.00) 2(CGCCGCCGCCGC,-,0.00),38(GCCTGGCCCCGG,-,0.00) 141(GGATCCGCCC,-,0.00) 372(CTTGGCGG,+,0.00),387(CGAGGCGG,+,0.00) 1(GCGCCGCCGC,-,0.00) 77(GCGGCCTGGCCC,+,0.00),78(CGGCCTGGCCCC,-,0.00) 561_WT_peak_5180 chr3 101405235 101405861 + 854 NA promoter-TSS (NM_000986) promoter-TSS (NM_000986) 15 NM_000986 6152 Hs.477028 NM_000986 HPRD:10365 RPL24 HEL-S-310|L24 ribosomal protein L24 protein-coding 0.057508 0.537480 86(AAGCGGAT,+,0.00),190(AGGTCGCT,+,0.00) 349(GGGCCCAGAGGG,-,0.00) -68(CGTCGGTC,+,0.00) -144(CTAAACCG,+,0.00) -26(TGTACCCG,-,0.00) -89(CGACGCGG,+,0.00) 561_WT_peak_3098 chr17 27278637 27279602 + 850 NA promoter-TSS (NM_020889) promoter-TSS (NM_020889) -611 NM_001290131 57649 Hs.444173 NM_020889 HPRD:15123 PHF12 PF1 PHD finger protein 12 protein-coding 0.045596 0.549689 45(AGACGCCT,-,0.00) 321(CGCTTTTG,-,0.00) 53(CCCGCGCA,+,0.00) 787(CCGCCTCG,-,0.00) 561_WT_peak_477 chr1 148604278 148605063 + 849 NA intron (NR_104217, intron 2 of 17) intron (NR_104217, intron 2 of 17) 43823 NM_173638 284565 Hs.523572 NM_173638 HPRD:14710 NBPF15 AB14|AG3|NBPF16 neuroblastoma breakpoint family, member 15 protein-coding 0.040764 0.508906 476(CGCGAACG,+,0.00) 200(TCCCGACCCT,+,0.00) 613(CCCCCGCC,-,0.00) 7(CTACTCGG,+,0.00) 561_WT_peak_460 chr1 147510571 147511604 + 845 NA Intergenic U1|snRNA|snRNA -23899 NR_111936 100034743 Hs.696575 NR_003377 ENSG00000215860 PDZK1P2 OTTHUMT00000038524|PDZK1P1 PDZ domain containing 1 pseudogene 2 pseudo 0.042594 0.540619 714(CCACCCTCCGCC,+,0.00) 127(GGCGGCGGAG,+,0.00) 279(CGCGGACG,+,0.00) 732(CCGACCAA,+,0.00) 580(CGGCACGG,-,0.00),691(TCGTCCCG,+,0.00) 789(CCCTCTCTTCCC,+,0.00) 550(GTCCGACC,-,0.00) 209(CAAAACTG,+,0.00) 150(ACTTTCTGTTTC,-,0.00) 499(CCCGCGCA,+,0.00) 756(GCGGGGGCAGTG,+,0.00) 62(AAAGCAGCCC,-,0.00) 561_WT_peak_2515 chr15 65588216 65588982 + 836 NA Intergenic Intergenic -9581 NM_017851 54956 Hs.30634 NM_017851 HPRD:07919 PARP16 ARTD15|C15orf30|pART15 poly (ADP-ribose) polymerase family, member 16 protein-coding 0.019582 0.385919 537(GGAGGCCGAG,+,0.00) 313(ATGCGGCT,+,0.00) -25(GTTACCCG,-,0.00) 561_WT_peak_1983 chr13 31736329 31736781 + 832 NA promoter-TSS (NM_001286504) promoter-TSS (NM_001286504) -30 NM_001286505 10808 Hs.743267 NM_006644 HPRD:09990 HSPH1 HSP105|HSP105A|HSP105B|NY-CO-25 heat shock 105kDa/110kDa protein 1 protein-coding 0.057522 0.536424 261(AACCGCTT,-,0.00) -39(CCGGGATGGTGG,-,0.00) 84(CGGCTTTG,-,0.00),122(GGGTTTTG,-,0.00),135(CGCTTTTG,-,0.00) 141(TGCGCGGG,-,0.00) 561_WT_peak_6274 chr6 31509159 31510155 + 808 NA promoter-TSS (NR_003065).3 promoter-TSS (NR_003065).3 595 NM_004640 7919 Hs.254042 NM_004640 HPRD:00805 DDX39B BAT1|D6S81E|UAP56 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B protein-coding 0.049197 0.532598 531(GGGACCGGAAAC,+,0.00) 183(GGCGCCGA,-,0.00) 418(CGCGTATG,+,0.00) 17(CCCACCGA,+,0.00) 68(GCCCCGCCCT,+,0.00) 384(TAGCGAAG,-,0.00),436(CAGCGACG,-,0.00) 616(TAAAACCG,+,0.00) -16(AACTGGGCCC,-,0.00),67(AGCCCCGCCC,-,0.00),288(AACTAGGCCC,-,0.00) 561_WT_peak_4078 chr2 55843984 55845361 + 793 NA 5' UTR (NM_020463, exon 1 of 15) 5' UTR (NM_020463, exon 1 of 15) 188 NM_001122964 57223 Hs.516182 NM_020463 HPRD:13854 SMEK2 FLFL2|PP4R3B|PSY2|smk1 SMEK homolog 2, suppressor of mek1 (Dictyostelium) protein-coding 0.076253 0.584906 391(AGGCCCGAATTC,+,0.00),781(CGGCCCGACTTC,+,0.00),898(GACTTCGGTTCC,-,0.00),1006(TGAACCGGAGTA,+,0.00) 652(GGCGGCCGAC,+,0.00) 155(AGCGACAT,-,0.00),452(AGGCCTCT,+,0.00),879(AGGCCGCT,+,0.00) 253(TCGCCGCC,+,0.00),860(TCCACGCC,+,0.00) 321(CGTCCGCG,-,0.00) 208(TCGGTCGT,-,0.00) 781(CGGCCCGA,-,0.00),1058(CGGAACGA,-,0.00) 43(TAGCAACG,-,0.00) 454(GCCTCTCCGCCC,+,0.00) 132(CGTCGGAC,+,0.00) 486(TTCACCCG,-,0.00) 490(CCCGCGCA,+,0.00) 370(GCGGCGGCGGCG,+,0.00) 463(CCCGGAGCCCCG,+,0.00) 657(CCGACAAG,-,0.00) 561_WT_peak_1814 chr12 96429353 96429971 + 771 NA promoter-TSS (NM_000895) promoter-TSS (NM_000895) -223 NM_000895 4048 Hs.524648 NM_000895 HPRD:01056 LTA4H - leukotriene A4 hydrolase protein-coding 0.051780 0.512116 -144(GGAGGAGGGAGA,-,0.00) 223(AGGGCGGGGC,-,0.00) -30(TGGTGCCG,+,0.00),273(TCGTGCGG,+,0.00) -162(CGTCGATA,+,0.00),218(TAGCGAGG,-,0.00) -74(GTCAGACG,-,0.00) 237(CAAAAACG,+,0.00) 89(GGTGGCCGAAGG,+,0.00) -23(GCGCGGCAAGCG,+,0.00) 561_WT_peak_5387 chr4 1040060 1040740 + 769 NA Intergenic (CCCTAG)n|Simple_repeat|Simple_repeat 34148 NM_021923 53834 Hs.193326 NM_021923 HPRD:16163 FGFRL1 FGFR5|FHFR fibroblast growth factor receptor-like 1 protein-coding 0.072059 0.715125 -128(CAGCCCTCCCCG,+,0.00),-95(CAGCCCTCCCCG,+,0.00),-62(CAGCCCTCCCCG,+,0.00),91(CAGCCCTCCCCG,+,0.00),168(CAGCCCTCCCCG,+,0.00),234(CAGCCCTCCCCG,+,0.00) 462(CCCTAGCCCCGC,-,0.00) 561_WT_peak_431 chr1 144533926 144534597 + 751 NA intron (NM_001278267, intron 52 of 130) intron (NM_001278267, intron 52 of 130) 78458 NR_003242 767846 Hs.657186 NR_003242 PFN1P2 C1orf152|COAS3 profilin 1 pseudogene 2 pseudo 0.043219 0.494048 439(GGAGGCCGAG,+,0.00) 93(CGTTCGCG,-,0.00) 399(GCCGGGCG,+,0.00) 484(CGTGGCTA,+,0.00) 0(CGGTTTTT,-,0.00) -126(TGCGCGGG,-,0.00),403(GGCGCGGT,-,0.00) -3(GGGCGGTTTT,+,0.00) -150(CGGCATGGGGGC,-,0.00) 561_WT_peak_1416 chr11 75946376 75947108 + 742 NA Intergenic CpG -29168 NM_004626 7481 Hs.108219 NM_004626 HPRD:04741 WNT11 HWNT11 wingless-type MMTV integration site family, member 11 protein-coding 0.076503 0.545703 203(AACCGCTT,-,0.00) 10(GAGCGACG,-,0.00) 200(AAAAACCG,+,0.00),366(CCAAACCG,+,0.00) 101(CCTTCCTTTTTC,-,0.00) 188(CAGCCAGGGTGC,-,0.00) 561_WT_peak_3528 chr18 71815188 71816033 + 742 NA promoter-TSS (NM_014177) promoter-TSS (NM_014177) -136 NM_014177 29090 Hs.532835 NM_014177 HPRD:13706 TIMM21 C18orf55|TIM21 translocase of inner mitochondrial membrane 21 homolog (yeast) protein-coding 0.059172 0.527187 -148(ACTTCCGGGCCT,-,0.00) -45(AGCGGCCT,-,0.00),258(AGGCGTCT,+,0.00) 672(CGGAACGA,-,0.00) 662(CGTCCCTA,+,0.00) 560(CGTTTTTG,-,0.00) -107(CCGCCTAG,-,0.00) 420(AGGCATGGCGGG,-,0.00) -52(GCTTTGCAGC,-,0.00) 561_WT_peak_147 chr1 28974948 28975590 + 736 NA TTS (NR_004407) TTS (NR_004407) 157 NR_004407 26824 Hs.640266 NR_004407 ENSG00000270103 RNU11 RNU11-1|U11 RNA, U11 small nuclear snRNA 0.034268 0.424572 422(CGCGTATG,+,0.00) 561_WT_peak_1713 chr12 53894871 53895566 + 734 NA promoter-TSS (NM_134324) promoter-TSS (NM_134324) -159 NM_134324 6895 Hs.326 NM_004178 HPRD:05446 TARBP2 LOQS|TRBP|TRBP1|TRBP2 TAR (HIV-1) RNA binding protein 2 protein-coding 0.077698 0.658046 63(GACTCCGGGCTT,-,0.00) -84(CCCAGAAGGCGG,-,0.00),-70(CAGCCTGCCCGG,+,0.00) 77(CCCCGGCCCT,+,0.00) 12(GGCGGGGG,+,0.00),39(CCCGCGGC,-,0.00) 181(CGGCACTA,-,0.00),221(TCGTACCG,+,0.00) -109(AAGCGACG,-,0.00),269(TAGCGGCG,-,0.00) 273(GGCGCGGC,-,0.00) 140(GCGGGGACGGAG,+,0.00) 60(CGCGACTCCGGG,-,0.00) 273(GGCGCGGCCC,-,0.00) 37(GCCCCGCGGC,-,0.00) 561_WT_peak_1872 chr12 117175784 117176099 + 724 NA promoter-TSS (NM_032814) promoter-TSS (NM_032814) -98 NM_024738 79794 Hs.592011 NM_024738 HPRD:07962 C12orf49 - chromosome 12 open reading frame 49 protein-coding 0.104762 0.693038 30(CCGGGAAAGGGG,-,0.00) 101(GCGACGCC,+,0.00) 26(AGTGCCGGGA,-,0.00) 87(TAGCGCCG,-,0.00) 90(CGCCGGAC,+,0.00) -136(CGCCGGCCCCGC,-,0.00) -76(GACCCCGCCC,-,0.00) -131(GCCCCGCCGC,-,0.00),-52(GCTCCGCAGC,-,0.00) 561_WT_peak_2753 chr16 28198068 28198441 + 719 NA intron (NM_015171, intron 1 of 23) intron (NM_015171, intron 1 of 23) 24985 NM_001270940 23214 Hs.460468 NM_015171 HPRD:10525 XPO6 EXP6|RANBP20 exportin 6 protein-coding 0.010724 0.441176 197(GGGTTTTG,-,0.00) 561_WT_peak_2602 chr15 90951230 90951781 + 713 NA intron (NM_003870, intron 2 of 37) intron (NM_003870, intron 2 of 37) 20032 NM_003870 8826 Hs.430551 NM_003870 HPRD:04541 IQGAP1 HUMORFA01|SAR1|p195 IQ motif containing GTPase activating protein 1 protein-coding 0.007260 0.371377 148(CTGTTTTG,-,0.00) 561_WT_peak_6348 chr6 52860290 52860856 + 709 NA promoter-TSS (NM_001512) promoter-TSS (NM_001512) -395 NM_001512 2941 Hs.485557 NM_001512 HPRD:06899 GSTA4 GSTA4-4|GTA4 glutathione S-transferase alpha 4 protein-coding 0.045936 0.472663 49(TCCCCTTCCTCC,+,0.00) 99(TCGGTCGA,-,0.00) 50(CCCCTTCCTCCC,-,0.00) 92(TGCGCGCT,-,0.00) 38(CTAGGCGG,+,0.00) 561_WT_peak_2047 chr13 49227641 49228156 + 701 NA Intergenic Intergenic -53053 NM_020377 57105 Hs.253706 NM_020377 HPRD:09293 CYSLTR2 CYSLT2|CYSLT2R|HG57|HPN321|KPG_011|hGPCR21 cysteinyl leukotriene receptor 2 protein-coding 0.003883 0.418605 -16(AGCCACTT,-,0.00),17(ATCCGCTT,-,0.00) -44(GAAACAGAAACC,+,0.00) 561_WT_peak_2789 chr16 30709322 30709918 + 693 NA promoter-TSS (NM_006662) promoter-TSS (NM_006662) 190 NM_001256932 730183 Hs.535456 NM_001256932 LOC730183 - uncharacterized LOC730183 protein-coding 0.100671 0.695142 43(GGCGGCCGAG,+,0.00) 109(TAGCGTCT,+,0.00) 216(CCGCGAAGGCGG,-,0.00),258(GCGGGAGGGGGG,-,0.00),378(CCGCCTCCCCCC,+,0.00),389(CCACCTTCCCGG,+,0.00) 12(CCGAGCGA,+,0.00) -132(AGCGCGCA,+,0.00),-9(GCCGCGCC,+,0.00) -9(GCCGCGCCGGCG,+,0.00) -11(GGGCCGCGCC,+,0.00) 48(CCGAGACG,-,0.00),216(CCGCGAAG,-,0.00),254(CTAGGCGG,+,0.00) 561_WT_peak_3469 chr18 21826131 21826459 + 686 NA intron (NM_080597, intron 15 of 27) intron (NM_080597, intron 15 of 27) 25901 NM_018030 114876 Hs.370725 NM_018030 HPRD:09472 OSBPL1A ORP-1|ORP1|OSBPL1B oxysterol binding protein-like 1A protein-coding 0.009146 0.410334 69(GGAGGAGGGGAA,-,0.00) -58(AGCCACCT,-,0.00) 36(TGGTTTTG,-,0.00) -34(TTTACCTG,-,0.00) 53(GAAATGGGAAGC,+,0.00) 561_WT_peak_3206 chr17 43238460 43239036 + 685 NA intron (NM_144608, intron 1 of 3) CpG 484 NM_144608 124790 Hs.56382 NM_144608 HPRD:08129 HEXIM2 - hexamethylene bis-acetamide inducible 2 protein-coding 0.086806 0.667244 254(GGCCGCCGAG,+,0.00) -56(AAGCCGTT,+,0.00),-55(AGCCGTTT,-,0.00) 385(CGGAGAAGGCGG,-,0.00) -148(TCGCCGCC,+,0.00),245(GGCGGCGA,-,0.00),268(TCGTCGCC,+,0.00) 148(CCCACTCGGCCC,+,0.00),228(TCCTCCCAGCCC,+,0.00) 202(ACTGCGCA,+,0.00),204(TGCGCAGC,-,0.00) 150(CACTCGGCCC,-,0.00) -146(GCCGCCATACCC,+,0.00),246(GCGGCGATGGCC,+,0.00),248(GGCGATGGCCGC,-,0.00) -151(GCCTCGCCGC,-,0.00),30(GCTGCGGGGC,+,0.00) 561_WT_peak_6751 chr7 92314392 92315186 + 683 NA intron (NM_001259, intron 4 of 7) intron (NM_001259, intron 4 of 7) -95081 NR_109929 257415 Hs.18564 NM_152789 HPRD:17557 FAM133B - family with sequence similarity 133, member B protein-coding 0.005038 0.376101 446(CAAAACTG,+,0.00) 452(TGGGTAAA,+,0.00) 561_WT_peak_5286 chr3 150320759 150321718 + 683 NA exon (NM_016275, exon 1 of 6) exon (NM_016275, exon 1 of 6) 172 NM_016275 51714 Hs.369052 NM_016275 HPRD:07446 SELT - selenoprotein T protein-coding 0.069864 0.607292 199(GGCGGCCGAA,+,0.00) 207(AAGTGGCT,+,0.00) 433(CCGGCTTCGCGG,+,0.00) 408(TCGGCGCC,+,0.00) 741(GAGCGCCAACCG,+,0.00) -6(TCATGCCG,+,0.00) -90(CAAAACTG,+,0.00) -109(CAGGTAAA,+,0.00) 78(TGCGCGGG,-,0.00),92(GCCGCGCA,+,0.00),143(TGCGCAGT,-,0.00),294(TGGGCGGC,-,0.00),395(GCCGCGCC,+,0.00) 80(CGCGGGCGCCGG,-,0.00) 86(CGCCGGGCCGCG,+,0.00),432(CCCGGCTTCGCG,-,0.00) 437(CTTCGCGG,+,0.00),727(CCGCGTCG,-,0.00) 410(GGCGCCATTGGC,+,0.00) 436(GCTTCGCGGC,-,0.00) 85(GCGCCGGGCCGC,-,0.00),526(CGGTCAGGCCGC,-,0.00) 561_WT_peak_5668 chr5 5523177 5523525 + 683 NA Intergenic MER41C|LTR|ERV1 100565 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongator complex ELL subunit 1 protein-coding 0.014368 0.426934 561_WT_peak_4097 chr2 64252887 64253233 + 683 NA Intergenic Intergenic -6846 NM_016516 51542 Hs.48499 NM_016516 HPRD:10302 VPS54 HCC8|PPP1R164|SLP-8p|VPS54L|WR|hVps54L vacuolar protein sorting 54 homolog (S. cerevisiae) protein-coding 0.008671 0.406340 -36(CCAAACCG,+,0.00) 27(CAAACATGAAGC,+,0.00) 561_WT_peak_2699 chr16 12009750 12010203 + 670 NA promoter-TSS (NM_001130006) promoter-TSS (NM_001130006) -151 NM_002094 2935 Hs.528780 NM_002094 HPRD:00753 GSPT1 551G9.2|ETF3A|GST1|eRF3a G1 to S phase transition 1 protein-coding 0.110375 0.696035 169(CGAGGAGGCGGA,-,0.00) 194(CTCGGCGGCC,-,0.00) 141(AAGCGGCT,+,0.00) -31(TCGCCGCC,+,0.00),109(GGAGTCGA,-,0.00) -52(CCCCCGGC,-,0.00) -161(TCGCGACG,-,0.00) -78(CTCCGACG,-,0.00),101(GGCCGACG,-,0.00) 88(CGGTTTTC,-,0.00) 91(TTTTCCCG,-,0.00) 98(GGGGGCCGACGG,+,0.00),108(GGGAGTCGAAGT,+,0.00),146(GCTCCGGCTCCC,-,0.00) 133(GCAACCGGAAGC,+,0.00) -144(GCGGCGGCGGCG,+,0.00),220(GGGGGGGCAGCG,+,0.00) 561_WT_peak_2606 chr15 91204550 91204902 + 666 NA intron (NR_120371, intron 2 of 2) MER44A|DNA|TcMar-Tigger 1261 NR_120371 101929765 Hs.615348 NR_120371 ENSG00000245479 LOC101929765 - uncharacterized LOC101929765 ncRNA 0.005682 0.413598 -54(CAGTTTTG,-,0.00) 561_WT_peak_534 chr1 153643258 153643500 + 662 NA intron (NM_001267809, intron 1 of 13) CpG 125 NM_001267809 3608 Hs.75117 NM_004515 HPRD:04419 ILF2 NF45|PRO3063 interleukin enhancer binding factor 2 protein-coding 0.070248 0.543210 46(AGGCGTCT,+,0.00) 51(TCTTGCCG,+,0.00) -29(CCTCATGGCGCC,-,0.00) 561_WT_peak_534-2 chr1 153643567 153643949 + 662 NA promoter-TSS (NM_004515) promoter-TSS (NM_004515) -254 NM_004515 3608 Hs.75117 NM_004515 HPRD:04419 ILF2 NF45|PRO3063 interleukin enhancer binding factor 2 protein-coding 0.034031 0.415144 561_WT_peak_1198 chr11 8625479 8625854 + 661 NA Intergenic Intergenic -9830 NM_001289058 65975 Hs.501833 NM_030906 HPRD:09642 STK33 - serine/threonine kinase 33 protein-coding 0.013333 0.460106 110(CCTCGGAC,+,0.00) 94(CAACACCG,+,0.00) 561_WT_peak_6145 chr6 26123082 26124739 + 660 NA promoter-TSS (NM_003512) promoter-TSS (NM_003512) 222 NM_003526 8347 Hs.658713 NM_003526 HIST1H2BC H2B.1|H2B/l|H2BFL|dJ221C16.3 histone cluster 1, H2bc protein-coding 0.054919 0.517491 30(CACTCCGGTCCG,-,0.00) 396(CTCCGCCGCC,-,0.00) 487(AGACGCTT,-,0.00),1180(AGGCCGCT,+,0.00) 221(CCGGGAACGCCG,-,0.00),573(CCGGGAAGCAGC,-,0.00),1414(CCGGCAACGCGG,-,0.00) 1348(GGGCAGGCGCGC,-,0.00) 1082(CCGACCAA,+,0.00) -23(CGCCACGA,-,0.00) 161(TGGCGACG,-,0.00) -111(CAAAACTG,+,0.00),60(CAAAACAG,+,0.00),1187(TGGTTTTG,-,0.00) 1127(AAAGCGGCCA,-,0.00),1298(GGGCCGAGTG,+,0.00),1419(AACGCGGCTC,-,0.00) 547(CCGACACG,-,0.00) 561_WT_peak_3028 chr17 8022200 8022685 + 655 NA promoter-TSS (NM_001165960) promoter-TSS (NM_001165960) -208 NM_001165960 59344 Hs.232770 NM_021628 HPRD:06231 ALOXE3 ARCI3|E-LOX|eLOX-3|eLOX3 arachidonate lipoxygenase 3 protein-coding 0.053608 0.497942 35(TCTGTCGG,-,0.00),120(TCAGTCGG,-,0.00),175(TCGGGCGG,-,0.00) -76(GGCGGGGG,+,0.00) -22(TTCACCCG,-,0.00) -152(AGCGGCCCCGCG,-,0.00) -89(GCGTCGCAGC,-,0.00) 561_WT_peak_6210 chr6 27721066 27721424 + 649 NA Intergenic tRNA-Val-GTY|tRNA|tRNA -8278 NR_038929 100131289 Hs.200573 NR_038929 LOC100131289 - uncharacterized LOC100131289 ncRNA 0.044693 0.398329 -64(AAGCGACT,+,0.00) -41(CGGTTTCG,-,0.00) 561_WT_peak_2211 chr14 52818807 52819506 + 646 NA Intergenic Intergenic 38140 NM_000956 5732 Hs.2090 NM_000956 HPRD:08905 PTGER2 EP2 prostaglandin E receptor 2 (subtype EP2), 53kDa protein-coding 0.008584 0.352857 496(AGACACTT,-,0.00) 561_WT_peak_4093 chr2 63815775 63816307 + 643 NA promoter-TSS (NM_001199112) promoter-TSS (NM_001199112) -174 NM_015910 51057 Hs.414952 NM_015910 HPRD:14228 WDPCP BBS15|C2orf86|FRITZ|FRTZ WD repeat containing planar cell polarity effector protein-coding 0.052632 0.564728 110(CCGCGTCG,-,0.00) 561_WT_peak_480 chr1 148766365 148767119 + 639 NA intron (NR_104217, intron 2 of 17) intron (NR_104217, intron 2 of 17) -39273 NM_001144032 730262 NM_001144032 PPIAL4E COAS2 peptidylprolyl isomerase A (cyclophilin A)-like 4E protein-coding 0.041114 0.495364 143(TCCCGACCCT,+,0.00) 556(CCCCCGCC,-,0.00) -50(CTACTCGG,+,0.00),559(CCGCCAAG,-,0.00) 561_WT_peak_7498 chrX 9281328 9281631 + 634 NA Intergenic L1ME3A|LINE|L1 -149856 NM_001139468 6907 Hs.495656 NM_005647 HPRD:02183 TBL1X EBI|SMAP55|TBL1 transducin (beta)-like 1X-linked protein-coding 0.009901 0.467105 -20(TATTCCGGGGCA,-,0.00) 561_WT_peak_2114 chr14 21081308 21082118 + 626 NA Intergenic Intergenic -22731 NM_001024822 493901 Hs.729466 NM_001024822 HPRD:18667 RNASE12 HEL-S-85p|RAI1 ribonuclease, RNase A family, 12 (non-active) protein-coding 0.039506 0.475956 366(GGCGCCGA,-,0.00) 249(CGGCAAGA,-,0.00) 418(GTCCGACC,-,0.00) 561_WT_peak_1905 chr12 123011049 123011611 + 624 NA promoter-TSS (NM_014708) promoter-TSS (NM_014708) 230 NR_036434 65117 Hs.432996 NM_023012 HPRD:13342 RSRC2 - arginine/serine-rich coiled-coil 2 protein-coding 0.069395 0.548845 287(AGACCCGGATGG,+,0.00) 322(CGTCGCAC,+,0.00) 3(CAACACCG,+,0.00) -18(CCTGCGGCTCCC,-,0.00) 383(CGAGGCGG,+,0.00) 248(GCTCCGAAGC,+,0.00) 561_WT_peak_3891 chr19 54641379 54641826 + 622 NA 5' UTR (NM_014516, exon 1 of 18) 5' UTR (NM_014516, exon 1 of 18) 166 NM_014516 4849 Hs.343571 NM_014516 HPRD:05368 CNOT3 LENG2|NOT3|NOT3H CCR4-NOT transcription complex, subunit 3 protein-coding 0.131991 0.729911 -78(CTCCGCCGCC,-,0.00),222(ATCGGCCGCC,-,0.00) 113(TCGCCTCCCCCG,+,0.00),227(CCGCCCTCCCCG,+,0.00) -115(TCGGCGCC,+,0.00) 103(CGGCGGGCGCTC,-,0.00),150(CGGCGCCAGCTC,+,0.00) 119(CCCCCGCC,-,0.00),211(CCCCCGGC,-,0.00) 55(TCGCGCCG,+,0.00) 58(CGCCGCTA,+,0.00) -38(GCGGAGCCATCG,+,0.00),149(GCGGCGCCAGCT,+,0.00),228(CGCCCTCCCCGC,-,0.00) 216(GGCGCCATCGGC,+,0.00),245(CCCGCCCTGGCG,+,0.00),247(CGCCCTGGCGAC,-,0.00),271(CGCGACATGGCC,+,0.00) 138(GCTCCTCAGC,-,0.00),146(GCGGCGGCGC,+,0.00) 561_WT_peak_658 chr1 185389834 185390300 + 613 NA Intergenic Intergenic -85896 NR_038424 100288079 Hs.131220 NR_038424 ENSG00000261024 GS1-279B7.1 - microtubule-associated protein 1 light chain 3 beta pseudogene pseudo 0.004292 0.445396 561_WT_peak_4736 chr21 9825474 9825862 + 607 NA promoter-TSS (NR_037421) promoter-TSS (NR_037421) -164 NR_037421 100500862 NR_037421 MIR3648-1 MIR3648 microRNA 3648-1 ncRNA 0.146907 0.794344 52(CGGCCCGGCGTC,+,0.00) 63(CCGCGTCCCCCG,+,0.00) 60(CGTCCGCG,-,0.00),158(CGCGTGCG,+,0.00) -102(CCCCGGCCCT,+,0.00) 69(CCCCCGGC,-,0.00) -52(CCTCTTCTTCCC,-,0.00) -11(TGGTGGCCCCGC,-,0.00),154(GCGGCGCGTGCG,+,0.00) 19(CCGCCTCG,-,0.00) 31(GCGCCGCCGC,-,0.00) 561_WT_peak_5111 chr3 50329526 50330125 + 605 NA TTS (NM_001200032) TTS (NM_001200032) 201 NM_006764 7866 Hs.315177 NM_006764 HPRD:04101 IFRD2 IFNRP|SKMc15|SM15 interferon-related developmental regulator 2 protein-coding 0.106845 0.700000 250(AGAGGCCT,-,0.00) -43(CCTCCTCCACGG,+,0.00),17(CCGGGAACCGGG,-,0.00),31(CGGGGGGCGCGG,-,0.00),184(CCGGGAAGGCGA,-,0.00) 311(TCCACGCC,+,0.00) 376(GCGCCCCAGCCC,+,0.00) 161(GCCCCGCCCT,+,0.00) -91(CCCCCGCC,-,0.00) 259(AGCGCGCA,+,0.00) 39(GCGGGGTCAGGG,+,0.00) 387(CCGCGTCG,-,0.00) 267(GGCGACGGCGGC,-,0.00) 561_WT_peak_1880 chr12 120729177 120730311 + 597 NA Intergenic Intergenic -10380 NM_012240 23409 Hs.50861 NM_012240 HPRD:06837 SIRT4 SIR2L4 sirtuin 4 protein-coding 0.044974 0.473128 824(GGAGGCCGAG,+,0.00) 426(GAGTGCCTGCCC,+,0.00) 891(GGTCGCTA,+,0.00) 539(AGGTTTTG,-,0.00) 323(CGGATAAA,+,0.00) 353(ACTGCGCA,+,0.00),788(GGCGCGGT,-,0.00) 830(CGAGGCGG,+,0.00),953(CTAGTCGG,+,0.00) 273(CGTCATGGCGGG,-,0.00) 561_WT_peak_62 chr1 11968081 11970191 + 596 NA Intergenic MLT1J|LTR|ERVL-MaLR 17349 NM_138346 90231 Hs.520094 NM_138346 HPRD:14576 KIAA2013 - KIAA2013 protein-coding 0.043602 0.493605 1040(GGAGGCCGAG,+,0.00) 1147(CCGGGCAGGAGG,-,0.00),1214(CCTGGAAGGCGG,-,0.00) -51(TCGACGAC,+,0.00) 761(CCGACCCA,+,0.00) 541(CCCCCGCC,-,0.00),1000(GCCGGGCG,+,0.00) 651(CCGCTGCTCCCG,-,0.00) 1120(CGTCTCTA,+,0.00) 170(CGGTTTTT,-,0.00) -92(ATTACCCG,-,0.00),1442(AGGGTAAA,+,0.00) 1549(GTTTCTTGTTTC,-,0.00) 1004(GGCGCGGT,-,0.00),1346(GCCGCCCA,+,0.00) 1046(CGAGGCGG,+,0.00) 1363(CCCGCCGTGCCC,+,0.00),1373(CCCGCCGTGCCC,+,0.00),1383(CCCGCCGTGCCC,+,0.00),1393(CCCGCCGTGCCC,+,0.00) 645(GCTCCCCCGC,-,0.00) 993(CCCCCAGGCCGG,-,0.00) 561_WT_peak_3153 chr17 37310556 37310961 + 595 NA Intergenic tRNA-Cys-TGY|tRNA|tRNA -2856 NM_020405 57125 Hs.125036 NM_020405 HPRD:08439 PLXDC1 TEM3|TEM7 plexin domain containing 1 protein-coding 0.037037 0.517241 91(CCCCCGCC,-,0.00) 34(CGGATTTG,-,0.00) 94(CCGCCACG,-,0.00) 561_WT_peak_3999 chr2 27434997 27435769 + 593 NA promoter-TSS (NM_021095) promoter-TSS (NM_021095) 164 NM_001170795 51374 Hs.9527 NM_016085 HPRD:16652 ATRAID APR--3|APR-3|APR3|C2orf28|PRO240|p18 all-trans retinoic acid-induced differentiation factor protein-coding 0.082902 0.610608 125(CCGCCCTGCTCC,+,0.00),246(TCCCCCTTCTCC,+,0.00) 584(AAGTCTCT,+,0.00) -6(CCGGGGAAGAGG,-,0.00) 145(GGCGTGGA,-,0.00),349(TCGGCGCC,+,0.00) 119(GGGCTGCCGCCC,-,0.00) 295(TCCCGACCCT,+,0.00) 28(GCCGCGGG,+,0.00) 337(TCGTGCAG,+,0.00),361(TCCTGCCG,+,0.00),486(TCGTGCGG,+,0.00) 270(CGGTTCTG,-,0.00) 238(CCAGCGGCTCCC,-,0.00),346(CCTTCGGCGCCC,-,0.00) 554(ACCGCGCC,+,0.00) 23(GCGGGGCCGCGG,+,0.00),31(GCGGGGCCGGGT,+,0.00) 22(GGCGGGGCCGCG,+,0.00),30(CGCGGGGCCGGG,+,0.00) -24(GGGCCGCTTA,+,0.00),34(GGGCCGGGTC,+,0.00) 15(GCTGCGGGGC,+,0.00),28(GCCGCGGGGC,+,0.00),50(GCAGCGGAGC,+,0.00) 561_WT_peak_1125 chr10 103227149 103227432 + 585 NA intron (NM_003939, intron 2 of 13) intron (NM_003939, intron 2 of 13) 113500 NM_033637 8945 Hs.643802 NM_003939 HPRD:04596 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding 0.010601 0.401408 -82(AGACACTT,-,0.00) 561_WT_peak_6265 chr6 30582736 30584001 + 584 NA intron (NM_002714, intron 2 of 19).6 intron (NM_002714, intron 2 of 19).6 1716 NM_002714 5514 Hs.106019 NM_002714 HPRD:04797 PPP1R10 CAT53|FB19|PNUTS|PP1R10|R111|p99 protein phosphatase 1, regulatory subunit 10 protein-coding 0.012648 0.403633 261(AACCGGCT,+,0.00),713(AAGTGTCT,+,0.00) 561_WT_peak_5314 chr3 169489826 169490237 + 575 NA promoter-TSS (NR_033703) promoter-TSS (NR_033703) -822 NM_018657 55892 Hs.507025 NM_018657 HPRD:06920 MYNN OSZF|ZBTB31|ZNF902 myoneurin protein-coding 0.036496 0.373786 7(CAAAACCC,+,0.00),83(CGAAACCG,+,0.00) 561_WT_peak_3583 chr19 3985009 3985488 + 571 NA intron (NM_001961, intron 1 of 14) CpG 213 NM_001961 1938 Hs.515070 NM_001961 HPRD:00561 EEF2 EEF-2|EF-2|EF2|SCA26 eukaryotic translation elongation factor 2 protein-coding 0.108559 0.672917 267(GGCGGCGA,-,0.00),270(GGCGACGA,-,0.00) 254(TCGCGCCG,+,0.00) 90(CGCCGCTA,+,0.00) 78(CTCCGGCCCCGC,-,0.00),143(CGTAGGCCCCGC,-,0.00),154(CGGAGGCCCCGC,-,0.00) 166(CGCCGCTCCGGG,-,0.00) 43(AGACATGGCGGC,-,0.00) 83(GCCCCGCCGC,-,0.00),159(GCCCCGCCGC,-,0.00) 561_WT_peak_4912 chr22 38901698 38903175 + 571 NA promoter-TSS (NM_006386) promoter-TSS (NM_006386) -91 NM_001098504 10521 Hs.528305 NM_006386 HPRD:10532 DDX17 P72|RH70 DEAD (Asp-Glu-Ala-Asp) box helicase 17 protein-coding 0.095464 0.623139 -96(CCGCCCTCCTCG,+,0.00) 107(GATCCCGGTCCC,-,0.00) 1269(GGAGGCCGAG,+,0.00) 65(AGGCCTCT,+,0.00),417(AGGCGTCT,+,0.00) 314(TCGCCGCC,+,0.00) 945(CGCCGCCAGCCC,+,0.00) -56(CGCGCACG,+,0.00),486(TGCGTACG,+,0.00) 220(ACGACCGA,+,0.00) 815(CCCGCGGC,-,0.00) -142(CGCCACGA,-,0.00) -109(CGTCGCCA,+,0.00),580(TTGCGACG,-,0.00),716(CGTCGTTA,+,0.00) -164(GGGCTGGGATGG,-,0.00),954(CCCTCTCGCCCC,+,0.00) 21(GTCCGCCG,-,0.00),279(CTCCGACG,-,0.00),327(CGTCGGAG,+,0.00),696(GTGCGACG,-,0.00) -50(CGAAACCG,+,0.00),365(CAAAGCCG,+,0.00),411(CGGTTTAG,-,0.00) -20(CCCTCGCCTCCC,-,0.00),200(CCTGCGGCTCCG,-,0.00) -146(GCCGCGCC,+,0.00),-58(TCCGCGCA,+,0.00),135(TCCGCGCA,+,0.00),745(TGCGCAGT,-,0.00) 944(GCGCCGCCAGCC,+,0.00),970(CCCTGGGCCCGC,-,0.00),992(GGCGGGCCCCGG,-,0.00) -148(GGGCCGCGCC,+,0.00),-67(GGGCCGAGGT,+,0.00) 1275(CGAGGCGG,+,0.00) 230(GCGGCGGCGC,+,0.00),429(CCTTCCCAGC,-,0.00) -153(GGGCCGGGCCGC,-,0.00) 561_WT_peak_3440 chr18 12948064 12948878 + 570 NA intron (NM_001013437, intron 1 of 8) CpG 488 NM_001013437 81929 Hs.301048 NM_031216 HPRD:15319 SEH1L SEC13L|SEH1A|SEH1B|Seh1 SEH1-like (S. cerevisiae) protein-coding 0.100737 0.642945 276(GCTGCCGGGGCT,-,0.00) 120(GGCGGGCGAG,+,0.00) 590(AGACACTT,-,0.00) 68(CGGGGAACGGGG,-,0.00),272(CCGCGCTGCCGG,+,0.00) 325(GGCGTCGT,-,0.00),403(TGCGTCGA,-,0.00) 393(TGGCTGGCGCTG,-,0.00) 228(CGTGCGCG,-,0.00) -119(CCGACGGA,+,0.00) 152(CCCTCCCCGCCC,+,0.00) -121(GCCCGACG,-,0.00),-85(CGGCGGAC,+,0.00) 350(TTCACCCG,-,0.00) 59(TGGGCGGC,-,0.00),212(TGCGCAGC,-,0.00),230(TGCGCGCT,-,0.00) -156(CGCTGCCGCCGC,-,0.00),266(CCCAGGCCGCGC,-,0.00) 598(CCGACAAG,-,0.00) 175(GGTCACGGCGGC,-,0.00) -99(GGCTCGCAGC,-,0.00) 127(GAGCCCTGGCTG,+,0.00),182(GCGGCCTCGCGG,+,0.00),264(CTCCCAGGCCGC,-,0.00) 561_WT_peak_6173 chr6 26473679 26474252 + 569 NA intron (NR_038992, intron 3 of 3) intron (NR_038992, intron 3 of 3) 8772 NR_038992 285819 Hs.575357 NR_038992 LOC285819 - uncharacterized LOC285819 ncRNA 0.013962 0.357143 370(CGGACCGA,+,0.00) 561_WT_peak_3036 chr17 8090120 8091287 + 567 NA TTS (NM_017622) TTS (NM_017622) 440 NR_039746 100616406 NR_039746 MIR4521 - microRNA 4521 ncRNA 0.044559 0.485445 -95(GGTGGCCGAG,+,0.00) 179(AAGCGTCT,+,0.00) 688(CCCGTACG,+,0.00),690(CGTACGGG,-,0.00) 1(CAGTTTTG,-,0.00),282(CGCTTTTG,-,0.00) 562(TTTTCCCG,-,0.00) 194(GGCGCCGTGGCT,+,0.00) 561_WT_peak_199 chr1 41157242 41157996 + 567 NA promoter-TSS (NM_001142590) promoter-TSS (NM_001142590) -61 NM_001142590 4802 Hs.713051 NM_014223 ENSG00000066136 NFYC CBF-C|CBFC|H1TF2A|HAP5|HSM|NF-YC nuclear transcription factor Y, gamma protein-coding 0.108753 0.692715 368(GGCGGAAGGCGA,-,0.00) 575(AGAGGCTT,-,0.00) 412(GCGGGGAGGCCG,-,0.00) -141(TCGTCGCC,+,0.00),303(TCGCCGCC,+,0.00) 252(TCGGTCCG,-,0.00),402(TTGGTCGG,-,0.00) 342(GCCCGGCCCG,+,0.00) 182(GGCGGGGG,+,0.00),381(GGCGGGGG,+,0.00) -88(CCGCACGA,-,0.00) 337(CGTCGGCC,+,0.00) 54(GCCGCGCC,+,0.00) 304(CGCCGCCGCCGC,-,0.00) 268(GCCGCCATGTTG,+,0.00) 561_WT_peak_6866-2 chr7 139025778 139026289 + 565 NA 5' UTR (NM_001244584, exon 1 of 11) 5' UTR (NM_001244584, exon 1 of 11) 155 NM_001244584 100996928 Hs.731488 NM_001244584 C7orf55-LUC7L2 - C7orf55-LUC7L2 readthrough protein-coding 0.090020 0.605469 324(CGGGTACG,+,0.00) -119(TTGGTCGG,-,0.00),99(CCGACCGT,+,0.00),262(CCGGCCGA,+,0.00) -154(CCCCCGCC,-,0.00) -142(CCGCTTCTCCTG,-,0.00) 97(GTCCGACC,-,0.00),146(CGTAGGAC,+,0.00),208(CGTCGCAC,+,0.00) 196(CCTTAGGGTCCC,-,0.00) -150(CGCCGGGCCCGC,-,0.00),253(GCGCGGCCACCG,+,0.00) 276(CGCGACACCGCG,-,0.00) 185(GACAATGGCGGC,-,0.00) 561_WT_peak_2733 chr16 22308261 22309083 + 565 NA promoter-TSS (NM_001258034) promoter-TSS (NM_001258034) -24 NM_018119 55718 Hs.460298 NM_018119 HPRD:15155 POLR3E RPC5|SIN polymerase (RNA) III (DNA directed) polypeptide E (80kD) protein-coding 0.083942 0.628190 578(GGAGGAGGGGCA,-,0.00) 416(CTCGGCCCCC,-,0.00) 556(AGGCCTCT,+,0.00) 574(GCGGGGAGGAGG,-,0.00) 408(CGTCCGCG,-,0.00) 570(TCGGGCGG,-,0.00) 193(AGGGCGGGGC,-,0.00) 309(GTCCGCCG,-,0.00) 159(CAGTTTTG,-,0.00) 386(CGGGTAAC,+,0.00) 220(GGCGCGGC,-,0.00) 280(CGCTGGGGCCGG,-,0.00),405(CGCCGTCCGCGC,-,0.00) 234(GGCGGAGCCGCG,+,0.00) 194(GGGCGGGGCT,+,0.00),233(GGGCGGAGCC,+,0.00) 510(CCGAGTAG,-,0.00) 517(GGCCAAGGAGGC,-,0.00) 356(GAGCCGGGCCGC,-,0.00) 561_WT_peak_6866 chr7 139025246 139025701 + 565 NA promoter-TSS (NM_001244584) promoter-TSS (NM_001244584) 277 NR_073059 154791 Hs.718441 NM_197964 HPRD:13714 C7orf55 FMC1 chromosome 7 open reading frame 55 protein-coding 0.039560 0.486842 -149(AGGGTAAA,+,0.00) -135(GGCGCGGT,-,0.00) 561_WT_peak_6801 chr7 104653026 104654819 + 564 NA promoter-TSS (NM_018682) promoter-TSS (NM_018682) 666 NR_024586 100216545 Hs.631150 NR_024586 KMT2E-AS1 - KMT2E antisense RNA 1 (head to head) ncRNA 0.076966 0.634894 989(GGAGGAGGGGGA,-,0.00) 522(AGAGCCGGAATC,+,0.00) 413(GGCTGCCGAG,+,0.00),1429(CGCGGCCGCC,-,0.00),1494(GGGGGCCGAG,+,0.00) 782(GGCGTTGA,-,0.00),931(GGCGTCGA,-,0.00) 141(CCGCGCCAGCGC,+,0.00),1318(GGGCGGCAGCCC,+,0.00) -62(CCGACCGC,+,0.00),-7(TGGGTCGG,-,0.00),1186(CCCACCGA,+,0.00) -21(CCCCCGCC,-,0.00) 1511(CCGTGCCG,+,0.00) 810(CTGCTTCTCCCC,-,0.00) 717(CAGCGACG,-,0.00) 913(CCTCCTCAGCCC,+,0.00),1364(CCCCCTCTGCCC,+,0.00) 328(CGGCTTTG,-,0.00) 501(CGGGGAAA,+,0.00),753(TTTACCCC,-,0.00),881(TTTATCCG,-,0.00) -140(GGGAGCCGCAGC,+,0.00) 472(GCGGGGCAAGGG,+,0.00),893(CCGGAGCCTGCG,+,0.00),1411(CGCCGCCGCCGC,-,0.00),1414(CGCCGCCGCCGC,-,0.00),1417(CGCCGCCGCCGC,-,0.00),1420(CGCCGCCGCCGC,-,0.00),1435(CGCCGCCGCCGC,-,0.00),1438(CGCCGCCGCCGC,-,0.00),1441(CGCCGCCGCCGC,-,0.00) 1293(CGAGCCTCCGCG,-,0.00) 1496(GGGCCGAGTC,+,0.00) 1499(CCGAGTCG,-,0.00),1500(CGAGTCGG,+,0.00) 1424(GCCGCCGCGGCC,+,0.00) 469(GCTGCGGGGC,+,0.00),1375(CCTGCGGAGC,+,0.00) 1591(ACTGCCTGGCTG,+,0.00) 561_WT_peak_833 chr1 245133977 245134884 + 562 NA promoter-TSS (NR_111907) promoter-TSS (NR_111907) -259 NR_111907 101928068 Hs.134857 NR_111907 LOC101928068 - uncharacterized LOC101928068 ncRNA 0.077178 0.600220 -89(TCACCCTCTTCC,+,0.00),-81(TTCCCCTCCTCC,+,0.00) -14(TGCGCCGGAGGC,+,0.00) -61(CCTCCTTCCCCC,+,0.00) 20(GGCGTCGT,-,0.00),548(GGCATCGA,-,0.00) 220(CGTTCGCG,-,0.00) -127(CCCCTCCTCCCG,-,0.00),-79(CCCCTCCTCCCG,-,0.00),282(CCGCTGCCTCCG,-,0.00) 333(TAGCGCCG,-,0.00),405(TAACGACG,-,0.00) 419(CAAAACCT,+,0.00),601(CAAGACCG,+,0.00) -23(TGCGCGGG,-,0.00),337(GCCGCGCA,+,0.00) 201(CGCTGGCGCAGC,-,0.00) 91(GGCGCCACGCCC,+,0.00) 39(GCGGGGAAGC,+,0.00),319(GCCCCGCCGC,-,0.00) 132(GTGGCCTGGGTG,+,0.00) 561_WT_peak_6328 chr6 42750411 42751853 + 559 NA Intergenic CpG -37248 NM_003192 6903 Hs.75064 NM_003192 HPRD:04276 TBCC CFC tubulin folding cofactor C protein-coding 0.094313 0.647956 1(GGCGGGCGAG,+,0.00),166(GGCGGCGGAG,+,0.00),224(GGCGGCCGCG,+,0.00),439(GGCGGCCCAG,+,0.00) -149(AGCCGGTT,-,0.00),360(AGCCGCCT,-,0.00),887(AACCACTT,-,0.00) -82(CCGGGAAGGAGG,-,0.00),293(CCCCGTTCCCGC,+,0.00) 919(GGGGTCGA,-,0.00) 913(GGGCTGGGGGTC,-,0.00) 404(CGCGTCCG,+,0.00) 409(CCGGCCGA,+,0.00) -14(AGGGCCTGGA,-,0.00) 317(CCCGCGGC,-,0.00),339(GCCGCGGG,+,0.00),448(GCCGGGCG,+,0.00) 872(CAGCTTCTTCCT,-,0.00),903(TGGAAGAAGGGG,+,0.00) -22(GGGCAGGGAGGG,-,0.00),1021(GGTCTGAGAGTG,-,0.00) 751(GGGAGCCGAGAG,+,0.00) -45(GGCGCGGC,-,0.00),480(GCCGCGCC,+,0.00) 320(GCGGCGGCGGCG,+,0.00),462(GCGAGGCCCGCG,+,0.00),686(GCGGCGCGGGCG,+,0.00),690(CGCGGGCGGCGC,-,0.00),740(CCGGGGCTAGCG,+,0.00),950(CCCTGACCCCGC,-,0.00),1047(CTCTGGCCCGGC,-,0.00) -99(CCCGGAGCCGCC,+,0.00),-40(GGCGGGGCCGCG,+,0.00),390(CGAGGATCCGCG,+,0.00),390(CGAGGATCCGCG,-,0.00) 693(GGGCGGCGCC,+,0.00) 108(CTTCTCGG,+,0.00),362(CCGCCTCG,-,0.00),563(CCGAGTCG,-,0.00) 721(GACCAGGGCGCC,-,0.00) -42(GCGGCGGGGC,+,0.00),323(GCGGCGGCGC,+,0.00),353(CCTTCCCAGC,-,0.00),364(GCCTCGCTGC,-,0.00),459(CCTGCGAGGC,+,0.00),730(GCCGCGAGGC,+,0.00),927(GCCTCGCGGC,-,0.00) 361(GCCGCCTCGCTG,+,0.00) 561_WT_peak_5086 chr3 45730309 45730963 + 552 NA promoter-TSS (NM_014016) promoter-TSS (NM_014016) -118 NM_014016 22908 Hs.156509 NM_014016 HPRD:07587 SACM1L SAC1 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding 0.076453 0.566412 146(GCTTCCGGGTAC,-,0.00) -123(AGCGGCAT,-,0.00),231(AGCGGCTT,-,0.00) 181(CCGCGCTCCCGC,+,0.00),444(CGGGGCGGGCGG,-,0.00) 29(GGAGTCGA,-,0.00) 371(GGGAAGAGGCTG,+,0.00) 450(GGGCGGAGAGAG,-,0.00) 59(GTCAGACG,-,0.00),254(CGTCGCAC,+,0.00) 4(CAAAACAG,+,0.00) 358(CGGGGAAA,+,0.00) 443(GCGGGGCGGGCG,+,0.00) 211(AACGCGCCCC,-,0.00) 271(CCGCGTCG,-,0.00) 561_WT_peak_452 chr1 145968822 145969576 + 551 NA intron (NR_104217, intron 2 of 17).2 intron (NR_104217, intron 2 of 17).2 -23722 NR_111936 100034743 Hs.696575 NR_003377 ENSG00000215860 PDZK1P2 OTTHUMT00000038524|PDZK1P1 PDZ domain containing 1 pseudogene 2 pseudo 0.038462 0.521854 142(GGCGGCGGAG,+,0.00) 294(CGCGGACG,+,0.00) 565(GTCCGACC,-,0.00) 224(CAAAACTG,+,0.00) 165(ACTTTCTGTTTC,-,0.00) 514(CCCGCGCA,+,0.00) 77(AAAGCAGCCC,-,0.00) 561_WT_peak_3996 chr2 27273506 27274476 + 551 NA promoter-TSS (NM_021831) promoter-TSS (NM_021831) -500 NM_021831 60509 Hs.138207 NM_021831 HPRD:07968 AGBL5 CCP5 ATP/GTP binding protein-like 5 protein-coding 0.055670 0.513903 52(GATTCCGGCTCG,-,0.00) 39(AGGTCGCT,+,0.00) 651(CCCGCCTCCCGG,+,0.00),652(CCGCCTCCCGGC,+,0.00) 466(TCGATGCC,+,0.00) 734(CCGAACGA,+,0.00) 409(GGCGGGGG,+,0.00) 57(CGGCTCGA,-,0.00) 686(CGGAAGACGCTG,+,0.00),712(CCGCTCCTGCCC,-,0.00) 517(CAAAACGG,+,0.00) 546(GCTACGTGTTTC,-,0.00) -29(GCAGCGGAGC,+,0.00) 663(CAGGCAGGCCGT,-,0.00) 561_WT_peak_1736 chr12 57913863 57914332 + 546 NA intron (NM_001195055, intron 1 of 3) intron (NM_001195055, intron 1 of 3) 203 NM_001195056 1649 Hs.505777 NM_004083 HPRD:00529 DDIT3 CEBPZ|CHOP|CHOP-10|CHOP10|GADD153 DNA-damage-inducible transcript 3 protein-coding 0.051173 0.576596 260(AAGTCTCT,+,0.00) 65(TCGGACGG,-,0.00) 3(GTCCGAAG,-,0.00) 142(AGGGTAAA,+,0.00) 561_WT_peak_7262 chr9 42019202 42019905 + 537 NA promoter-TSS (NR_003670) promoter-TSS (NR_003670) 31 NR_003670 654466 Hs.536967 NM_001039113 KGFLP2 - keratinocyte growth factor-like protein 2 pseudo 0.051209 0.595170 485(GGAGGAGGTGGG,-,0.00) 183(AGCGGCTT,-,0.00) -91(GCGCCTTCCCCG,+,0.00) 216(GGCGCCGA,-,0.00) -133(CGCGTGCG,+,0.00) 248(GCCGGGCG,+,0.00) 516(GGCCGACG,-,0.00) -125(CAGGTAAA,+,0.00),-67(TGTACCCG,-,0.00) -152(TGCGCGGA,-,0.00) 239(GCAGCCCTGGCC,+,0.00) -140(GCTGCGACGC,+,0.00) 561_WT_peak_4143 chr2 73461250 73461766 + 537 NA non-coding (NR_029403, exon 1 of 11) non-coding (NR_029403, exon 1 of 11) 144 NM_006429 10574 Hs.368149 NM_006429 HPRD:06896 CCT7 CCTETA|CCTH|NIP7-1|TCP1ETA chaperonin containing TCP1, subunit 7 (eta) protein-coding 0.083333 0.640232 -156(ACGACCGA,+,0.00) -17(TCCCGGCCCA,+,0.00) 260(CGGCCCGA,-,0.00) 120(CGTCGCCA,+,0.00) 292(GGGCTGCGTGGG,-,0.00) 34(TGGGCGGC,-,0.00) 148(GGCCGGCGCCGC,-,0.00) 256(GGCTCGGCCC,-,0.00) -71(CCGAGTCG,-,0.00),-70(CGAGTCGG,+,0.00) 249(GCGGCCTGGCTC,+,0.00) 561_WT_peak_4648 chr20 44563256 44563773 + 536 NA intron (NM_022104, intron 1 of 16) CpG 197 NM_022104 63935 Hs.472856 NM_022104 HPRD:12779 PCIF1 C20orf67|PPP1R121 PDX1 C-terminal inhibiting factor 1 protein-coding 0.127660 0.749035 207(GGGCCCGGAGAG,+,0.00) -27(GGCGGTCGAG,+,0.00),174(GGCGGCCGCG,+,0.00) -92(TCCCGGCCCG,+,0.00) 327(GGCGGGGG,+,0.00) 247(CCGCTGCTGCCG,-,0.00) -34(CAAAACGG,+,0.00) 74(GGGATCCGAAGC,+,0.00) -148(GGCGCGGC,-,0.00),-106(TGCGCAGC,-,0.00),58(GCCGCGCC,+,0.00),172(TGGGCGGC,-,0.00),178(GCCGCGCC,+,0.00) 58(GCCGCGCCAGGG,+,0.00),323(GCGGGGCGGGGG,+,0.00),335(GCGGAGCCCGAG,+,0.00) -99(CGCGGAGTCCCG,+,0.00),-12(CGTGTAGCCGCG,+,0.00) 333(GGGCGGAGCC,+,0.00) -48(CGAGGCGG,+,0.00) 84(GCTGGGGGGC,+,0.00),320(GCGGCGGGGC,+,0.00) 561_WT_peak_3077 chr17 21117130 21117848 + 535 NA non-coding (NR_024547, exon 1 of 3) non-coding (NR_024547, exon 1 of 3) 419 NR_024547 8834 Hs.592945 NM_003876 TMEM11 C17orf35|PM1|PMI transmembrane protein 11 protein-coding 0.097493 0.695410 320(CGCGCCGGAAGC,+,0.00),351(GGGCCCGTAGTC,+,0.00) 71(AGCCGCCT,-,0.00),146(AGACGCCT,-,0.00) 331(CCCCGCCCCCGG,+,0.00) 230(GGCCGACG,-,0.00) 6(CGGGGAAA,+,0.00) 543(TGCGCGGA,-,0.00) -151(CTCGGGCCCCGC,-,0.00) 66(CGCTGAGCCGCC,+,0.00) 329(AGCCCCGCCC,-,0.00) 200(CGCGCCAAGGCG,+,0.00),202(CGCCAAGGCGGC,-,0.00) 561_WT_peak_2444 chr15 41952528 41953285 + 530 NA intron (NM_001080541, intron 1 of 22) CpG 296 NM_001080541 23269 Hs.187569 NM_001080541 ENSG00000174197 MGA MAD5|MXD5 MGA, MAX dimerization protein protein-coding 0.117569 0.642480 237(GCGCGTCCCCGG,+,0.00) 287(TCGACGCC,+,0.00),500(GGCGTCGC,-,0.00) 362(GGGGTGCCGCTC,-,0.00) -110(CGCGTGCG,+,0.00),-108(CGTGCGCG,-,0.00),434(CGCTTACG,+,0.00),436(CTTACGCG,-,0.00) 343(GCCCTGCCCT,+,0.00) 403(CGCCCGGC,-,0.00) 260(CGTCGCTC,+,0.00),502(CGTCGCTT,+,0.00) -138(TGCGCGGC,-,0.00),-106(TGCGCGGT,-,0.00),218(GCTGCGCA,+,0.00) 366(TGCCGCTCCGCG,-,0.00) 180(GGGCCGCCTT,+,0.00),337(GGCTCGGCCC,-,0.00) 257(CCGCGTCG,-,0.00),309(CGAGGCGG,+,0.00) 40(CGGGCCTGGGTG,+,0.00) 561_WT_peak_3268 chr17 56708638 56709335 + 528 NA intron (NM_198393, intron 2 of 32) intron (NM_198393, intron 2 of 32) 60430 NM_001201457 56155 Hs.390221 NM_031272 ENSG00000121101 TEX14 CT113 testis expressed 14 protein-coding 0.022956 0.396848 507(CAAAAACG,+,0.00) -124(CGGGGCTGGCTG,+,0.00) 561_WT_peak_7601 chrX 108297417 108297761 + 527 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA 317819 NR_110652 101928358 Hs.722300 NR_110652 LOC101928358 - uncharacterized LOC101928358 ncRNA 0.066860 0.562319 86(CCCCCGGC,-,0.00) -140(CGGCAGGA,-,0.00) -148(CGGGTAAA,+,0.00),7(CGGGGAAA,+,0.00) 100(CGGTGTCCCCGC,-,0.00) 122(GGGCGGGGTC,+,0.00) -7(CTTGGCGG,+,0.00) 117(GTCCAGGGCGGG,-,0.00) 561_WT_peak_7055 chr8 74258758 74259179 + 524 NA intron (NR_125388, intron 1 of 5) L1MB5|LINE|L1 9728 NR_125388 101926926 Hs.640090 NR_125388 LOC101926926 - uncharacterized LOC101926926 ncRNA 0.011876 0.407583 -68(CAAAACCA,+,0.00) 561_WT_peak_6305 chr6 35995210 35995552 + 524 NA promoter-TSS (NM_001315) promoter-TSS (NM_001315) -73 NM_001315 1432 Hs.485233 NM_001315 HPRD:02619 MAPK14 CSBP|CSBP1|CSBP2|CSPB1|EXIP|Mxi2|PRKM14|PRKM15|RK|SAPK2A|p38|p38ALPHA mitogen-activated protein kinase 14 protein-coding 0.078947 0.577259 -16(CCGCCTTCGCGC,+,0.00) -134(TTTCCCCG,-,0.00),118(TGGGTAAA,+,0.00) 91(AGCCCCGCCC,-,0.00) -129(CCGACACG,-,0.00) 561_WT_peak_2010 chr13 41768473 41768910 + 522 NA promoter-TSS (NM_032138) promoter-TSS (NM_032138) 11 NM_032138 84078 Hs.63841 NM_032138 KBTBD7 - kelch repeat and BTB (POZ) domain containing 7 protein-coding 0.073227 0.602740 142(AACCGCTT,-,0.00) 111(TCGGACGG,-,0.00) 118(GCCGGGCG,+,0.00) -131(CGGCACGG,-,0.00) 123(GCGGGGACAGAG,+,0.00) 561_WT_peak_4282 chr2 122288267 122288952 + 519 NA TTS (NR_023343) TTS (NR_023343) 153 NR_023343 100151683 Hs.689638 NR_023343 ENSG00000264229 RNU4ATAC MOPD1|RNU4ATAC1|TALS|U4ATAC RNA, U4atac small nuclear (U12-dependent splicing) snRNA 0.043796 0.473761 500(GGAGGCCGAG,+,0.00) -105(GTCGTCGA,-,0.00) -66(CAGACCGA,+,0.00) -151(CGCTTTTG,-,0.00) -9(GCTTCCTGCTTG,-,0.00) 464(GGCGCGGT,-,0.00) -62(CCGACTAG,-,0.00) 561_WT_peak_2843 chr16 50840438 50840745 + 517 NA Intergenic Intergenic 64562 NM_001042412 1540 Hs.578973 NM_015247 HPRD:05427 CYLD BRSS|CDMT|CYLD1|CYLDI|EAC|MFT|MFT1|SBS|TEM|USPL2 cylindromatosis (turban tumor syndrome) protein-coding 0.035831 0.487013 45(CGGTTGTG,-,0.00) 561_WT_peak_3817 chr19 47354072 47354477 + 516 NA promoter-TSS (NM_021575) promoter-TSS (NM_021575) -22 NM_004069 1175 Hs.119591 NM_004069 HPRD:03762 AP2S1 AP17|CLAPS2|FBH3|FBHOk|HHC3 adaptor-related protein complex 2, sigma 1 subunit protein-coding 0.024691 0.514778 -53(GGGGCCAGCCTG,+,0.00) 561_WT_peak_3083 chr17 25563818 25564113 + 506 NA Intergenic Intergenic 57057 NR_039748 100616277 NR_039748 miRBase:MI0016889 MIR4522 - microRNA 4522 ncRNA 0.000000 0.378378 102(AGGCCTCT,+,0.00) 561_WT_peak_495 chr1 149812897 149814820 + 506 NA TTS (NM_003516).2 TTS (NM_003516).2 460 NM_003516 8337 Hs.530461 NM_003516 HIST2H2AA3 H2A|H2A.2|H2A/O|H2A/q|H2AFO|H2a-615|HIST2H2AA histone cluster 2, H2aa3 protein-coding 0.080083 0.601871 192(CTCCGCCGCC,-,0.00) 1060(GCGCGCCGGCCC,+,0.00) 775(CGGGCCGGGC,-,0.00) 81(CCCCCGCC,-,0.00),435(CCCGCGGC,-,0.00) 1143(CGGGACGA,-,0.00),1564(TCGCGCCG,+,0.00),1622(CGGCAAGA,-,0.00) -20(CCCTTTCCGCCC,+,0.00),680(GGACTGAGAGTG,-,0.00) 218(CAAAACAG,+,0.00),1528(CGGTCTTG,-,0.00) 43(CCTACAGCTCCC,-,0.00),1125(GGGAACTGAAGG,+,0.00) 1096(TGCGCAGC,-,0.00) 395(CGCGCGCTCCGC,-,0.00),1142(GCGGGACGAGCG,+,0.00) 776(GGGCCGGGCT,+,0.00),881(GACGCCGCCC,-,0.00),991(GAGCCGCGTT,+,0.00) 100(CTTGGCGG,+,0.00),472(CGTGGCGG,+,0.00),1081(CCGCGTAG,-,0.00) 196(GCCGCCAGGGCG,+,0.00),469(GACCGTGGCGGC,-,0.00),884(GCCGCCCTGGGC,+,0.00),1160(GGCCTTGGCGCG,-,0.00) 197(CCGCCAGGGCGC,-,0.00) 561_WT_peak_2981 chr17 2414870 2415250 + 506 NA 5' UTR (NM_024086, exon 1 of 10) 5' UTR (NM_024086, exon 1 of 10) 140 NM_024086 79066 Hs.632237 NM_024086 HPRD:14556 METTL16 METT10D methyltransferase like 16 protein-coding 0.060526 0.556430 -118(AGCCACAT,-,0.00),88(AGCCGCAT,-,0.00) -133(CGCGTGCG,+,0.00) 95(TAGCGAAG,-,0.00) -34(CGGGTTAA,+,0.00) 561_WT_peak_2386 chr14 104028761 104029368 + 500 NA promoter-TSS (NM_004873) promoter-TSS (NM_004873) 87 NM_001015048 9529 Hs.5443 NM_004873 HPRD:04862 BAG5 BAG-5 BCL2-associated athanogene 5 protein-coding 0.148270 0.768092 99(GGGCCCGGCAGC,+,0.00) 235(GAGCGGCCGCCC,+,0.00) 157(CGTCCGCG,-,0.00) 303(ACGGTCGG,-,0.00) 387(GCCGCGGG,+,0.00) 362(TCGCGCCG,+,0.00) 368(CGTCGCAA,+,0.00) 270(CCCCCTCACCCC,+,0.00) 281(CGTCGCAC,+,0.00) 310(GCCGCGCC,+,0.00) -133(GCGGGGACAGCG,+,0.00),96(CCCGGGCCCGGC,-,0.00) -50(CGGGGAGCCCCG,+,0.00),312(CGCGCCGCCGCG,+,0.00),312(CGCGCCGCCGCG,-,0.00) 108(AGCCCCGCCC,-,0.00),351(AAAGCGGCCC,-,0.00) 410(GGCCATGGTGGT,-,0.00) 197(GCGGCGCAGC,+,0.00),197(GCGGCGCAGC,-,0.00),202(GCAGCGAGGC,+,0.00),313(GCGCCGCCGC,-,0.00) -95(CCGACAGGCCGC,-,0.00),203(CAGCGAGGCAGC,-,0.00) 561_WT_peak_3115 chr17 30676758 30677626 + 498 NA promoter-TSS (NM_003457) promoter-TSS (NM_003457) 35 NM_001032293 7756 Hs.500775 NM_003457 HPRD:04576 ZNF207 BuGZ zinc finger protein 207 protein-coding 0.054147 0.532796 528(AGGCGTCT,+,0.00) 240(CGGGGAACGAGG,-,0.00) 508(GGCGTGGA,-,0.00) 253(CGTCGGCC,+,0.00) 561_WT_peak_1279 chr11 47789164 47789601 + 497 NA promoter-TSS (NM_015308) promoter-TSS (NM_015308) -389 NM_015308 23360 Hs.6834 NM_015308 HPRD:10996 FNBP4 FBP30 formin binding protein 4 protein-coding 0.050343 0.536530 18(GGAGGCCGAG,+,0.00) -140(TCCGTCGG,-,0.00) 85(CGTCTCTA,+,0.00) 117(GGCGCGGT,-,0.00) 24(CGAGGCGG,+,0.00),146(CTAGTCGG,+,0.00) 561_WT_peak_209 chr1 45187047 45187965 + 497 NA intron (NM_001145636, intron 6 of 11) U5|snRNA|snRNA -17984 NM_006845 11004 Hs.720061 NM_006845 HPRD:05172 KIF2C CT139|KNSL6|MCAK kinesin family member 2C protein-coding 0.014161 0.421110 707(AGCCACAT,-,0.00) 488(TGGGTAAA,+,0.00) 385(GCTTCCCAGC,-,0.00) 561_WT_peak_188 chr1 38478010 38478465 + 496 NA promoter-TSS (NM_016037) promoter-TSS (NM_016037) -147 NM_016037 51118 Hs.472038 NM_016037 HPRD:16711 UTP11L CGI94 UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) protein-coding 0.065934 0.563596 241(GGCGGCAGAG,+,0.00) -92(CCGTGCCG,+,0.00) -149(CAAAACTG,+,0.00),193(CTAAACCG,+,0.00) -1(GCGGGCCAAGCG,+,0.00) 238(CTTGGCGG,+,0.00) 235(GGACTTGGCGGC,-,0.00) 561_WT_peak_2268 chr14 69282793 69283635 + 491 NA Intergenic CpG -20254 NM_001244701 677 Hs.85155 NM_004926 HPRD:03041 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein-like 1 protein-coding 0.102138 0.703440 107(TGCGGCCGAG,+,0.00),449(GGCGGCTGAG,+,0.00) 17(TGGCGGCT,+,0.00) 138(TCGCCACCCCGG,+,0.00),247(GCGGGAAGGCTG,-,0.00),332(TCTCCTCCCCGG,+,0.00),552(CCGTCCTCCCGC,+,0.00) 89(GCGACGCC,+,0.00) 436(GGGCCGGGGCTG,-,0.00) 121(GCGGTCGG,-,0.00) 180(CGGGCCGGGC,-,0.00),411(GCCCGGCCCG,+,0.00) 183(GCCGGGCG,+,0.00),559(CCCGCGGC,-,0.00) 593(CAGCACGA,-,0.00) 136(CGTCGCCA,+,0.00) 217(GGCCGACG,-,0.00) 260(CCTTGGCCTCCC,-,0.00),349(TCTGCGGCTCCC,-,0.00) 342(GGCGCGGT,-,0.00),464(TGGGCGGC,-,0.00) 189(CGCGGGGCCCGG,-,0.00),190(GCGGGGCCCGGG,+,0.00) 652(GGGCCCCTTT,+,0.00) 117(CTTCGCGG,+,0.00),207(CCGCCAAG,-,0.00) 226(GCTCGGCAGC,-,0.00) 176(AAGCCGGGCCGG,-,0.00),318(CCGGCCTGCCGG,+,0.00) 561_WT_peak_1414 chr11 75110491 75110984 + 490 NA promoter-TSS (NR_000005) promoter-TSS (NR_000005) 202 NM_001260507 6188 Hs.546286 NM_001005 HPRD:10941 RPS3 S3 ribosomal protein S3 protein-coding 0.089249 0.625506 -101(AGCCACTT,-,0.00),69(AGCGGCCT,-,0.00) -70(CGGCAAGA,-,0.00) -137(CGTCGCTC,+,0.00) 298(TGGTTTTG,-,0.00) 20(CTTCTCGG,+,0.00) 561_WT_peak_2378 chr14 102783284 102783630 + 490 NA promoter-TSS (NM_001267827) promoter-TSS (NM_001267827) -257 NM_001267827 55778 Hs.743359 NM_018335 HPRD:18532 ZNF839 C14orf131 zinc finger protein 839 protein-coding 0.083815 0.608069 -105(CGGCGCCGGCCC,+,0.00),-76(GGGCGGGCGCGG,-,0.00) 42(CCCGTACG,+,0.00),44(CGTACGGG,-,0.00) -142(CGGAAGTCGCGG,+,0.00) -86(AGTCGCTA,+,0.00) -106(GCGGCGCCGGCC,+,0.00),-102(CGCCGGCCCGGC,-,0.00) -100(CCGGCCCGGCAG,+,0.00) 561_WT_peak_3303 chr17 62501561 62502559 + 489 NA intron (NM_004396, intron 1 of 12) CpG 424 NM_004396 1655 Hs.279806 NM_004396 HPRD:01615 DDX5 G17P1|HLR1|HUMP68|p68 DEAD (Asp-Glu-Ala-Asp) box helicase 5 protein-coding 0.094188 0.627628 41(CCGCCCTCCTAC,+,0.00) 21(AGCCACAT,-,0.00),566(AAGTCGCT,+,0.00),700(AGCCGCTT,-,0.00) -131(CGGCGTTCCCGC,+,0.00) -68(TCGACGCT,+,0.00),513(GGCGTCAA,-,0.00),580(GGCCTCGA,-,0.00) -140(TCGGCCGG,-,0.00) -157(TCCCGGCCCG,+,0.00) -137(GCCGGGCG,+,0.00),-42(GCCGGGCG,+,0.00),392(CCCCCGCC,-,0.00) 197(CCCTCTCAACTC,+,0.00),418(CCCTCCCATCCC,+,0.00) -10(GTCCGAGG,-,0.00) 151(CCTTCGTCTGCC,-,0.00) -148(GGGCGGAGTC,+,0.00),-134(GGGCGGCGTT,+,0.00),-117(GGGCGGCGCT,+,0.00),685(CGGCCGCTTT,+,0.00) -18(GCCGCCATGTCC,+,0.00),505(CCCGACATGGCG,+,0.00),507(CGACATGGCGTC,-,0.00) -23(GCGCCGCCGC,-,0.00) 561_WT_peak_3156 chr17 37617407 37617900 + 488 NA promoter-TSS (NM_016507) promoter-TSS (NM_016507) -111 NM_016507 51755 Hs.416108 NM_015083 HPRD:10849 CDK12 CRK7|CRKR|CRKRS cyclin-dependent kinase 12 protein-coding 0.056795 0.502024 130(TCGCGACG,-,0.00) 318(GCGACAGGAAGC,+,0.00) 306(CGCGGCACCCCG,-,0.00) 297(CACCTAGGCCGC,-,0.00) 561_WT_peak_210 chr1 45195961 45196982 + 488 NA Intergenic AluSx4|SINE|Alu -9019 NM_006845 11004 Hs.720061 NM_006845 HPRD:05172 KIF2C CT139|KNSL6|MCAK kinesin family member 2C protein-coding 0.021548 0.397260 153(TCGTGCCA,+,0.00) 228(CAAAACCA,+,0.00),241(CAAAACCA,+,0.00),643(CAAAACGG,+,0.00) 290(GGGAGGCCAAGG,+,0.00) 294(GGCCAAGGCGGG,-,0.00) 561_WT_peak_4033 chr2 39443909 39444476 + 488 NA intron (NM_001009565, intron 2 of 7) intron (NM_001009565, intron 2 of 7) 12481 NM_001009565 344387 Hs.403201 NM_001009565 HPRD:16698 CDKL4 - cyclin-dependent kinase-like 4 protein-coding 0.021164 0.411972 145(TCGACGCG,+,0.00) 303(TCGGTTGG,-,0.00) 290(CAAAACCA,+,0.00) 146(CGACGCGG,+,0.00) 561_WT_peak_4432 chr2 201728737 201729727 + 487 NA promoter-TSS (NM_001162407) promoter-TSS (NM_001162407) 52 NM_001162407 1195 Hs.433732 NM_004071 HPRD:09058 CLK1 CLK|CLK/STY|STY CDC-like kinase 1 protein-coding 0.097980 0.617558 27(CCGGCCTCCGCC,+,0.00),571(CGAGCAGGCGGA,-,0.00) 206(CTCGGCCGCG,-,0.00) 40(AGCCGCCA,-,0.00) 280(CGGGGACGGCGG,-,0.00) 194(GGCGGCGA,-,0.00),496(TGCGTCGA,-,0.00) 85(CCGCCCGA,+,0.00),89(CCGACCGT,+,0.00) 546(GCCGCGGG,+,0.00) 274(TCGCGCCG,+,0.00) 779(TAGCGACC,-,0.00) 210(GCCGCGCA,+,0.00) 279(CCGGGGACGGCG,+,0.00) -8(CGGGGAGCCTCG,+,0.00),537(CGCGTCTCCGCC,-,0.00) 62(CGAGGCGG,+,0.00) 546(GCCGCGGGGC,+,0.00) 561_WT_peak_2882 chr16 69466007 69466295 + 487 NA intron (NM_030579, intron 1 of 4) MER47A|DNA|TcMar-Tigger 7653 NM_030579 80777 Hs.461131 NM_030579 HPRD:13106 CYB5B CYB5-M|CYPB5M|OMB5 cytochrome b5 type B (outer mitochondrial membrane) protein-coding 0.003472 0.387543 -147(CTAGGCGG,+,0.00) 561_WT_peak_2662 chr16 2801877 2802824 + 487 NA promoter-TSS (NM_016333) promoter-TSS (NM_016333) 20 NM_016333 23524 Hs.433343 NM_016333 HPRD:06913 SRRM2 300-KD|CWF21|Cwc21|SRL300|SRm300 serine/arginine repetitive matrix 2 protein-coding 0.108765 0.671941 94(AGGCGGCT,+,0.00) 112(ACGGGAAGGCGG,-,0.00) 329(GGCGTCGC,-,0.00),509(TCGGCGCC,+,0.00),676(GGCGTCGG,-,0.00),682(GGCGTCGG,-,0.00) 107(CGGGTACG,+,0.00) 144(TCGCTCGG,-,0.00) 527(GCCGCGGG,+,0.00) 596(TCGTGCTG,+,0.00),763(CGGCAAGA,-,0.00) 331(CGTCGCTT,+,0.00),401(CGTCGCTT,+,0.00) -38(CGTCGGGC,+,0.00) 9(CGGGTAAC,+,0.00) 551(GGCAGGCCCCGC,-,0.00) 255(CCGGGCTCCGCG,-,0.00) -7(AACGTGGCCC,-,0.00),610(AGCGCGGCCC,-,0.00) 228(CCGCCACG,-,0.00),494(CTTCGCGG,+,0.00),559(CCGCGACG,-,0.00),713(CGAGGCGG,+,0.00) 227(GCCGCCACGCCC,+,0.00) 527(GCCGCGGGGC,+,0.00) -90(CCGGCCTGGCTG,+,0.00),549(CCGGCAGGCCCC,-,0.00) 561_WT_peak_1571 chr12 8113257 8113594 + 485 NA Intergenic Intergenic -24533 NM_006931 6515 Hs.419240 NM_006931 HPRD:00686 SLC2A3 GLUT3 solute carrier family 2 (facilitated glucose transporter), member 3 protein-coding 0.029674 0.440828 145(AAGCGGAT,+,0.00) -55(GCCTCCCAGC,-,0.00) 561_WT_peak_4683 chr20 49547832 49548671 + 485 NA promoter-TSS (NM_001282531) promoter-TSS (NM_001282531) -724 NM_015339 23394 Hs.293736 NM_015339 HPRD:09793 ADNP ADNP1|MRD28 activity-dependent neuroprotector homeobox protein-coding 0.077473 0.660714 -35(GGCGGCCGAG,+,0.00),313(GGCGGCGGAG,+,0.00) 572(AGCGACTT,-,0.00) -152(CCGGGCCGGCGG,-,0.00),-121(CGGGGGAGGGGG,-,0.00),490(GCGGGAAGGCGC,-,0.00) -69(CGGACCGA,+,0.00) -123(GGCGGGGG,+,0.00) -103(CCGCGTCTCCCC,-,0.00) -72(CCTCGGAC,+,0.00),659(GTCCGCCG,-,0.00) 212(CGGATTTG,-,0.00) 383(TGCGCGGG,-,0.00) 305(GCAGCGCCGGCG,+,0.00),385(CGCGGGCCCAGC,-,0.00),386(GCGGGCCCAGCT,+,0.00) 443(GGCGGCTCCACG,-,0.00) 640(GGGCCGAGAT,+,0.00) 479(GCTGAGAAGC,+,0.00) 561_WT_peak_2230 chr14 58706467 58706830 + 482 NA Intergenic tRNA-Lys-AAG|tRNA|tRNA -4875 NM_002788 5684 Hs.558799 NM_002788 HPRD:01463 PSMA3 HC8|PSC3 proteasome (prosome, macropain) subunit, alpha type, 3 protein-coding 0.044077 0.392857 -53(AAGCGTTT,+,0.00) 36(CCGACTGA,+,0.00) 48(GCCGGGCG,+,0.00) 119(CCGCGTAG,-,0.00) 561_WT_peak_1940 chr13 20437997 20439133 + 479 NA promoter-TSS (NM_001142684) promoter-TSS (NM_001142684) -789 NM_001039649 9205 Hs.530988 NM_014242 ENSG00000132950 ZMYM5 HSPC050|MYM|ZNF198L1|ZNF237 zinc finger, MYM-type 5 protein-coding 0.082746 0.679859 260(TCCCCCACCTCC,+,0.00) -113(GCTACCGGGTCC,-,0.00),172(GCTTTCGGGGCC,-,0.00) -79(TCGCCGCC,+,0.00) 437(CGTCCGCG,-,0.00) -150(CCGGTCGG,-,0.00) 343(CAAAACCA,+,0.00) 516(GGGAGCTGCAGG,+,0.00) 239(GCCGCGCC,+,0.00) 234(CCCTCGCCGCGC,-,0.00),620(CGCTGGCCCTGC,-,0.00),736(GCGGCCCCTGCG,+,0.00) 484(CGCAGCTCCCCG,-,0.00) 179(GGGCCGCGGT,+,0.00) 270(CCCGCCATGGCT,+,0.00),272(CGCCATGGCTGC,-,0.00),919(CGCCCTGGCGGT,-,0.00) 79(GCGGCCTGGATG,+,0.00) 561_WT_peak_5129 chr3 56716531 56717237 + 477 NA exon (NM_001112736, exon 1 of 24) exon (NM_001112736, exon 1 of 24) 251 NM_001112736 23272 Hs.116877 NM_015224 HPRD:10183 FAM208A C3orf63|RAP140|se89-1 family with sequence similarity 208, member A protein-coding 0.086402 0.669024 -138(GGCGGCCGTG,+,0.00),88(GGCGGCCGCG,+,0.00),148(CTCGGCCCCC,-,0.00),270(CTCCGCCGCC,-,0.00) 418(TCGCCGCC,+,0.00) -112(CGGCCGGCGCTG,-,0.00) 299(TCCGTCGG,-,0.00) 339(TCGCGCCG,+,0.00) -121(GGGGAGAGGCGG,+,0.00),396(GGGAAGGGGCGG,+,0.00) 430(TGCTCTCAGCCC,+,0.00) -140(TGGGCGGC,-,0.00),92(GCCGCGCC,+,0.00),140(TGGGCGGC,-,0.00) 207(CGCCGCCGCCGC,-,0.00) -132(CGTGGCGG,+,0.00) -137(GCGGCCGTGGCG,+,0.00),-135(GGCCGTGGCGGT,-,0.00),82(GGGCAGGGCGGC,-,0.00),334(CGCCATCGCGCC,-,0.00) 176(GCGCCGCCGC,-,0.00) 561_WT_peak_5106 chr3 49130996 49131923 + 477 NA promoter-TSS (NM_017730) promoter-TSS (NM_017730) 45 NM_017730 54870 Hs.297389 NM_017730 HPRD:13372 QRICH1 - glutamine-rich 1 protein-coding 0.105717 0.695043 44(GTTTTCGGCTCC,-,0.00) 348(AGCCGATT,-,0.00),749(AAGCCTCT,+,0.00) -126(CCGGGAACGCGC,-,0.00) 376(GGCGTCGG,-,0.00),513(TGGACGCC,+,0.00) -119(CGCGCACG,+,0.00) -130(CGGGCCGGGA,-,0.00) 102(CCCCCGCC,-,0.00) -29(TCGCGCCG,+,0.00) 269(CGTCGCTC,+,0.00) 133(CCGTCTCAGGCC,+,0.00),331(CCCTCACAGCCA,+,0.00) 378(CGTCGGAT,+,0.00) 277(CAAGACCG,+,0.00) -74(CGCGTAAA,+,0.00) -25(GCCGCGCC,+,0.00) 201(CGCCGCCGCCGC,-,0.00),204(CGCCGCCGCCGC,-,0.00),228(CGCCGGCCCCGC,-,0.00),498(GGCTCGCTCCGC,-,0.00),658(GCGGGGCCTGGC,+,0.00) 531(GGGCGGAGCT,+,0.00) 51(GCTCCGGAGC,+,0.00),51(GCTCCGGAGC,-,0.00),149(GCTTCGCCGC,-,0.00),233(GCCCCGCCGC,-,0.00) 561_WT_peak_6176 chr6 26521372 26521642 + 477 NA promoter-TSS (NR_026790) promoter-TSS (NR_026790) -427 NR_026790 493812 Hs.272939 NR_026790 ENSG00000228223 HCG11 bK14H9.3 HLA complex group 11 (non-protein coding) ncRNA 0.059259 0.461255 561_WT_peak_6485 chr6 136610145 136612027 + 475 NA promoter-TSS (NM_014739) promoter-TSS (NM_014739) -97 NM_001077441 9774 Hs.486542 NM_014739 HPRD:16544 BCLAF1 BTF|bK211L9.1 BCL2-associated transcription factor 1 protein-coding 0.072264 0.546468 361(CGGCCCGTAGTG,+,0.00) 1424(GGCAGCCGAG,+,0.00) 1166(ATGTGGCT,+,0.00),1492(AGCCACAT,-,0.00) 140(TCGGCGCC,+,0.00),443(TCGCCGCC,+,0.00),641(TCGACGCG,+,0.00),1141(TGGACGCC,+,0.00) 316(GCGCGCCCGCCG,+,0.00) 178(CGCGTGCG,+,0.00),180(CGTGCGCG,-,0.00),258(CGCACGCG,-,0.00),262(CGCGCACG,+,0.00) 194(TCAGTCGG,-,0.00) -133(GCCGCGGG,+,0.00),151(GGCGGGGG,+,0.00),344(CCCCCGCC,-,0.00),348(CGCCCGGC,-,0.00) 1238(TCGTGGCG,+,0.00),1297(TCGTGCCA,+,0.00) -147(CAAAACAG,+,0.00),-52(CAAAAACG,+,0.00),62(CAAAACCC,+,0.00),1578(TAAAACCG,+,0.00) 724(CCTTCCGCTCCG,-,0.00) 182(TGCGCGGA,-,0.00) 556(CGCGGTTCCGGG,-,0.00) 712(AGCCCCGCCC,-,0.00),817(GGCTCCGCCC,-,0.00) 741(GCTTCCTGGCTG,+,0.00) 561_WT_peak_2894 chr16 70557248 70558185 + 467 NA promoter-TSS (NM_012426) promoter-TSS (NM_012426) 25 NM_012426 23450 Hs.514435 NM_012426 SF3B3 RSE1|SAP130|SF3b130|STAF130 splicing factor 3b, subunit 3, 130kDa protein-coding 0.053362 0.537313 572(AAACGGCT,+,0.00),573(AACGGCTT,-,0.00) 451(CCGGGGAGGCGG,-,0.00) -148(TCGACCCC,+,0.00) 497(GGCGGGGG,+,0.00) 570(CAAAACGG,+,0.00) 417(AGGGTAAA,+,0.00) 561_WT_peak_4444 chr2 203130164 203130926 + 466 NA promoter-TSS (NM_015934) promoter-TSS (NM_015934) 30 NM_015934 51602 Hs.471104 NM_015934 HPRD:11036 NOP58 NOP5|NOP5/NOP58 NOP58 ribonucleoprotein protein-coding 0.070866 0.566186 502(GGAGGAGGGAGA,-,0.00) -124(CCCGGGAGGCGG,-,0.00),407(GGGGGAAGGCGG,-,0.00) 36(CCGCCCCAGCCC,+,0.00) 144(CGCGTTCG,+,0.00) 96(TCTGTCGG,-,0.00) -149(CGCCCGGC,-,0.00) 110(CGTTGCTA,+,0.00) 231(TTTGCCCG,-,0.00) -121(GGGAGGCGGAGG,+,0.00) 264(CCGCGTAG,-,0.00) 561_WT_peak_6956 chr8 28747412 28748205 + 464 NA promoter-TSS (NM_001172562) promoter-TSS (NM_001172562) -103 NM_001135726 79618 Hs.563560 NM_024567 HPRD:07964 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding 0.050441 0.607053 441(TCCCCCTTCTCC,+,0.00) -126(AAGCGTCT,+,0.00),71(AGCCGCCA,-,0.00) 529(CCGCCTTCCCTC,+,0.00) 306(CGCCCGGC,-,0.00),587(GCCGGGCG,+,0.00) 88(CCCTCTCCACCC,+,0.00),545(CTATCTCAGCCC,+,0.00) 561_WT_peak_7137 chr8 125462529 125463070 + 464 NA promoter-TSS (NM_017956) promoter-TSS (NM_017956) -249 NM_017956 55039 Hs.9925 NM_017956 HPRD:07947 TRMT12 TRM12|TYW2 tRNA methyltransferase 12 homolog (S. cerevisiae) protein-coding 0.025878 0.446494 70(TTTACCCA,-,0.00) 561_WT_peak_3772 chr19 41770130 41770843 + 461 NA exon (NM_007040, exon 1 of 15) exon (NM_007040, exon 1 of 15) 259 NM_007040 11100 Hs.155218 NM_007040 HPRD:10428 HNRNPUL1 E1B-AP5|E1BAP5|HNRPUL1 heterogeneous nuclear ribonucleoprotein U-like 1 protein-coding 0.113604 0.708683 297(CGAGGAGGTCGA,-,0.00) -115(GTTTCCGGGCCC,-,0.00) 225(GGAGGCCGAG,+,0.00) -40(GGGGGGAGGCGG,-,0.00),432(CCGGGGAGCCCG,-,0.00) 180(TCGAGGCC,+,0.00),257(TCGACGCC,+,0.00) 368(CGCACGCG,-,0.00) 78(CGGGCCGGGC,-,0.00) 424(GGCGGGGG,+,0.00) -52(AGGCACGA,-,0.00) -61(CATCGGAC,+,0.00) 28(CCTTCGCCTCCT,-,0.00) 337(ACCGCGCA,+,0.00),417(TGCGCGGG,-,0.00) 420(GCGGGGCGGGGG,+,0.00) 372(CGCGGAGCCCGG,+,0.00) 79(GGGCCGGGCT,+,0.00) 387(CTACTCGG,+,0.00) 561_WT_peak_2569 chr15 79165269 79166269 + 459 NA intron (NM_001265604, intron 1 of 11) CpG 438 NM_001265605 10933 Hs.374503 NM_006791 HPRD:09532 MORF4L1 Eaf3|HsT17725|MEAF3|MORFRG15|MRG15|S863-6 mortality factor 4 like 1 protein-coding 0.086000 0.610390 -92(GGCGGCGA,-,0.00),-71(GGCGCCGA,-,0.00),812(TTGACGCC,+,0.00) 350(TCGGGCGG,-,0.00) 42(AGGGCCGGGG,-,0.00) 45(GCCGGGGG,+,0.00),323(GGCGGGGG,+,0.00),368(CGCCCGGC,-,0.00) -160(CGTCTGAC,+,0.00),-159(GTCTGACG,-,0.00) 97(CGGGGAAA,+,0.00) 275(GGGAGGCGACGG,+,0.00) 166(GCTGCGCA,+,0.00) 46(CCGGGGGCGGCG,+,0.00),96(GCGGGGAAAGCG,+,0.00) 540(CGTCTCGG,+,0.00) 288(AGCGCCATGGCG,+,0.00),290(CGCCATGGCGGC,-,0.00) 561_WT_peak_1566 chr12 7053570 7054166 + 459 NA intron (NM_138425, intron 2 of 2) CpG-5081 665 NM_138425 113246 Hs.405913 NM_138425 HPRD:13609 C12orf57 C10|GRCC10|TEMTYS chromosome 12 open reading frame 57 protein-coding 0.075503 0.577889 74(CGGGGAAGGTGG,-,0.00),93(GCGGGAAGGCGG,-,0.00),112(GCGGGAAGGCGG,-,0.00) -141(CCGACGCC,+,0.00) 128(TGGGTCGG,-,0.00) 10(TCGTGCTG,+,0.00) -143(CTCCGACG,-,0.00),86(GTCAGACG,-,0.00),105(GTCAGACG,-,0.00) 294(CTTACCCG,-,0.00) -163(CGCTGGGCCCGC,-,0.00) 67(GCTGCGACGG,+,0.00) 561_WT_peak_4776 chr21 34914681 34915757 + 458 NA promoter-TSS (NM_175085) promoter-TSS (NM_175085) -21 NM_001136006 2618 Hs.473648 NM_000819 HPRD:00716 GART AIRS|GARS|GARTF|PAIS|PGFT|PRGS phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase protein-coding 0.063197 0.578459 880(TCACCCTTCTCC,+,0.00) 766(TTTTCCGGGCCC,-,0.00) 785(CCGCCCCCCCAG,+,0.00) 58(GGGCGGGGGCTG,-,0.00) 326(CGTGCGCG,-,0.00) 59(GGCGGGGG,+,0.00) 519(TAGCGAGG,-,0.00) 298(CGTCAGAC,+,0.00) 861(CAGAACCG,+,0.00) 628(CAGGTAAA,+,0.00) 648(TCTTCTGCTCCC,-,0.00) 850(ACTCCCTGTTTC,-,0.00) 328(TGCGCGGC,-,0.00) 727(CTCAGGCCCCGC,-,0.00) 548(GACGCCATGGCG,+,0.00),550(CGCCATGGCGAC,-,0.00) 561_WT_peak_6147 chr6 26156431 26159462 + 456 NA promoter-TSS (NM_138720) promoter-TSS (NM_138720) -403 NM_021063 3017 Hs.591797 NM_021063 HPRD:07535 HIST1H2BD H2B.1B|H2B/b|H2BFB|HIRIP2|dJ221C16.6 histone cluster 1, H2bd protein-coding 0.050148 0.513852 -17(GCTTCCGGCTCG,-,0.00) 124(AAGCGTCT,+,0.00),255(AGCCGCAT,-,0.00),613(AGGCGGCT,+,0.00),1540(AGAGGCCT,-,0.00),2818(AGACACCT,-,0.00) 887(GGCGTCGC,-,0.00) 2606(CCCCCGCC,-,0.00) -43(CGGCTCGA,-,0.00),-12(CGGCTCGA,-,0.00) -22(CCTCTGCTTCCG,-,0.00),1881(GGGAAGAAGCGC,+,0.00),2103(CTGCTGCTTCCG,-,0.00) 927(CGATTTTG,-,0.00),2839(CTAAACCG,+,0.00) 616(CGGCTAAA,+,0.00),793(CGGGAAAA,+,0.00),1036(TTTTCCCG,-,0.00) 42(GCCGCGCC,+,0.00),393(GGCGCGGC,-,0.00) -58(GCGGGCGCAGCG,+,0.00) -82(CGCAGCTCCGCC,-,0.00),-53(CGCAGCGCCGCG,+,0.00),-53(CGCAGCGCCGCG,-,0.00) -79(AGCTCCGCCC,-,0.00),814(GGGCGGGTCT,+,0.00) -113(CGAGGCGG,+,0.00),67(CCGAGAAG,-,0.00),631(CCGCCAAG,-,0.00),2135(CGTGTCGG,+,0.00) 396(GCGGCCAAGGCC,+,0.00),608(ACCCAAGGCGGC,-,0.00) 111(GCGGCCAAGC,+,0.00),802(GCTGCTAAGC,+,0.00) 561_WT_peak_5495 chr4 69215197 69215911 + 454 NA 5' UTR (NM_133370, exon 1 of 16) 5' UTR (NM_133370, exon 1 of 16) 270 NM_133370 91746 Hs.175955 NM_133370 HPRD:11689 YTHDC1 YT521|YT521-B YTH domain containing 1 protein-coding 0.096639 0.640559 56(CGGCCCGTCATC,+,0.00),215(CTGCCCGGATAC,+,0.00) -64(AAGTGTCT,+,0.00),102(AGCCGCCA,-,0.00),312(AGCGGCCT,-,0.00) 211(CCGTCTGCCCGG,+,0.00),503(GCGGGGAGGCGG,-,0.00) 39(GGGCCCCAGCCT,+,0.00) -57(TCGGTGGG,-,0.00) 272(CCGCTTTTTCCC,-,0.00) 383(TGGCGACG,-,0.00),396(CGGCGCTA,+,0.00) 491(GTGCGGAGAGGG,-,0.00) 230(CGTCGCAC,+,0.00) 117(CCTTCGGTTTCC,-,0.00) -34(GCGAGGCCAGCT,+,0.00),131(CGCTGCCACCGC,-,0.00),140(CGCCGCCGCCGC,-,0.00),166(CGCGGGCGCCGC,-,0.00) 393(GGGCGGCGCT,+,0.00) 103(GCCGCCATGGCT,+,0.00),105(CGCCATGGCTCC,-,0.00) 171(GCGCCGCAGC,-,0.00) 561_WT_peak_1957 chr13 25199442 25199803 + 454 NA Intergenic LTR54|LTR|ERV1 45276 NR_002815 374491 Hs.406779 NR_002815 TPTE2P6 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 6 pseudo 0.008310 0.400552 104(CGGTTTTA,-,0.00) 179(CCTTCTGCTTCC,-,0.00) 185(GCTTCCTGTTTC,-,0.00) 561_WT_peak_2228 chr14 57735296 57736160 + 453 NA promoter-TSS (NM_006544) promoter-TSS (NM_006544) -111 NM_006544 10640 Hs.743987 NM_006544 HPRD:07258 EXOC5 HSEC10|PRO1912|SEC10|SEC10L1|SEC10P exocyst complex component 5 protein-coding 0.078704 0.589595 10(GGCTCCGGGCCG,-,0.00) 88(AAACGCTT,-,0.00) 233(TCGACGCT,+,0.00) 55(AGGGGCGGGA,-,0.00) 234(CGACGCTA,+,0.00) -87(CGGCTGAGAGGC,-,0.00) 644(CAGGTAAA,+,0.00) -28(GGCGCGGC,-,0.00) 111(GCGCCGCCCGCG,+,0.00),187(GAGGGGCCGGCG,+,0.00) 110(GGCGCCGCCC,-,0.00) -135(GCCGCCGGGGCC,+,0.00) -85(GCTGAGAGGC,+,0.00),28(GCTCCCCAGC,-,0.00) 561_WT_peak_676 chr1 201123565 201124015 + 452 NA promoter-TSS (NM_016456) promoter-TSS (NM_016456) -107 NM_001288568 252839 Hs.181444 NM_016456 HPRD:15542 TMEM9 TMEM9A transmembrane protein 9 protein-coding 0.044444 0.512195 -73(CCGACCGC,+,0.00),15(CCGACCAA,+,0.00) -121(TCCCCGCCCT,+,0.00) 10(CAAACCCG,+,0.00),196(CAAAAACG,+,0.00) -78(TTAACCCG,-,0.00) -62(GTCGCCATGGCA,+,0.00),-60(CGCCATGGCAAC,-,0.00) 561_WT_peak_1733 chr12 57118778 57119324 + 451 NA promoter-TSS (NR_045277) promoter-TSS (NR_045277) 15 NR_045277 4666 Hs.505735 NM_005594 HPRD:03137 NACA NACA1|skNAC nascent polypeptide-associated complex alpha subunit protein-coding 0.064103 0.606947 -112(AGGCTCGGATTC,+,0.00),212(GATTCCGGGTCA,-,0.00) 236(AGCCACTT,-,0.00) 109(CAGGGAACGCGG,-,0.00) 143(CCGAGCGA,+,0.00) 276(GGCGGGGG,+,0.00) 217(CGGGTCAA,+,0.00) 346(TGCGCGGA,-,0.00) -98(GGCCCGCCCCGC,-,0.00) 348(CGCGGACCCACG,+,0.00) -93(GCCCCGCAGC,-,0.00) 561_WT_peak_4638 chr20 42086382 42087296 + 450 NA intron (NR_034009, intron 1 of 6) CpG 335 NR_034009 6431 Hs.725336 NM_006275 HPRD:09054 SRSF6 B52|HEL-S-91|SFRS6|SRP55 serine/arginine-rich splicing factor 6 protein-coding 0.142232 0.715847 4(CTCGGCCGCC,-,0.00) -59(CCGCCCCACCGG,+,0.00),679(CCGGGCAGGCGC,-,0.00) 358(GGCGTCGC,-,0.00),484(GCGACGCC,+,0.00),493(ACGACGCC,+,0.00) 391(CGCGCACG,+,0.00),397(CGTGCGCG,-,0.00) 692(AGGGCCGGGG,-,0.00) 648(GGCGGGGG,+,0.00),695(GCCGGGGG,+,0.00) -94(ACGTGCCG,+,0.00),41(TCTTGCCG,+,0.00) 298(GGAAAGAAGCGG,+,0.00) 346(TGGCGACG,-,0.00),567(CGTCGCGA,+,0.00),575(TCGCGACG,-,0.00) 669(GCCTCCCAGCCC,+,0.00) 82(GTCCGCCG,-,0.00) -85(TGCGCGCT,-,0.00),-48(GCCGCCCA,+,0.00),353(GGCGCGGC,-,0.00) -67(TCCAGGCCCCGC,-,0.00),556(CCCGGGGCCCGC,-,0.00),557(CCGGGGCCCGCG,+,0.00),618(CGCGCGCTCCGC,-,0.00) 317(CGCGGCGCCGCG,+,0.00),317(CGCGGCGCCGCG,-,0.00),355(CGCGGCGTCGCG,+,0.00),355(CGCGGCGTCGCG,-,0.00),363(CGCGGGGGCGCG,+,0.00) -150(CGTCGCGG,+,0.00),-107(CGACGCGG,+,0.00),117(CCGCCACG,-,0.00),360(CGTCGCGG,+,0.00),482(CCGCGACG,-,0.00),564(CCGCGTCG,-,0.00) 197(GGCTATGGCCGC,-,0.00),306(GCGGCCAAGGCC,+,0.00),308(GGCCAAGGCCGC,-,0.00) 669(GCCTCCCAGC,-,0.00),726(GCCCCGCTGC,-,0.00) 402(GCGTCCTGGCTA,+,0.00) 561_WT_peak_3119 chr17 33288013 33288750 + 449 NA promoter-TSS (NM_052857) promoter-TSS (NM_052857) 147 NM_006584 10693 Hs.73072 NM_006584 HPRD:09873 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1, subunit 6B (zeta 2) protein-coding 0.074627 0.575881 418(TCCGCCTCCGCC,+,0.00) 301(GCGACGCC,+,0.00) 20(CGCGGACG,+,0.00) 152(TCGGGCGG,-,0.00),370(CCGACGGA,+,0.00) 368(GCCCGACG,-,0.00) 288(CAAAAACG,+,0.00) 177(AAAGCTGCCC,-,0.00) 17(CTACGCGG,+,0.00) 128(GGTCCGCAGC,-,0.00) 561_WT_peak_3338 chr17 73179198 73179573 + 449 NA promoter-TSS (NM_006937) promoter-TSS (NM_006937) -287 NM_006937 6613 Hs.380973 NM_006937 HPRD:04332 SUMO2 HSMT3|SMT3B|SMT3H2|SUMO3|Smt3A small ubiquitin-like modifier 2 protein-coding 0.058667 0.587766 44(GGAGGAAGGGGA,-,0.00) -157(GCGCCCGCCCGG,+,0.00),22(CAGGGAAGGCAG,-,0.00) -24(TCGGTGGG,-,0.00) 18(AGGCCAGGGA,-,0.00) -152(CGCCCGGC,-,0.00),-109(GCCGCGGG,+,0.00) -156(CGCCCGCCCGGC,-,0.00) -131(CGCGGACACGCG,+,0.00),-107(CGCGGGGGCGCG,+,0.00) -86(GGGCGGGGCT,+,0.00) 561_WT_peak_3790 chr19 45256643 45258031 + 449 NA intron (NM_005178, intron 2 of 8) intron (NM_005178, intron 2 of 8) -4577 NR_107052 102465879 NR_107052 MIR8085 hsa-mir-8085 microRNA 8085 ncRNA 0.042507 0.624910 112(CGAGGAGGGCGG,-,0.00) 192(CGGGTACG,+,0.00) 119(GGCGGGGG,+,0.00),270(GGCGGGGG,+,0.00),276(GGCGGGGG,+,0.00),840(CCCCCGCC,-,0.00) 965(GTCCGAGG,-,0.00) 33(TTTACCGG,-,0.00) 922(GGAGCAGGAAGC,+,0.00) 271(GCGGGGGCGGGG,+,0.00) 936(AGCCCCGCCC,-,0.00),1005(AGCCCCGCCC,-,0.00) 361(GCTTGGCAGC,-,0.00) 49(GCGGCCCGGCCC,+,0.00) 561_WT_peak_6634 chr7 32529729 32530155 + 448 NA promoter-TSS (NM_012322) promoter-TSS (NM_012322) 81 NM_012322 23658 Hs.424908 NM_012322 HPRD:06285 LSM5 YER146W LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) protein-coding 0.075117 0.587822 -148(GGAGGAGCCCGA,-,0.00) -21(CTCGGCCCCC,-,0.00) 76(AGCCGCCA,-,0.00) 144(CCGCTTTTTCCG,-,0.00) 232(TTTCCCCG,-,0.00) -23(CCCTCGGCCCCC,-,0.00) 3(GCTCCCTGTTCC,-,0.00) 212(GGGTCGCGTT,+,0.00) 77(GCCGCCATGGCT,+,0.00),79(CGCCATGGCTAC,-,0.00) 51(GCTGCGACGG,+,0.00) 561_WT_peak_7110 chr8 110345987 110346590 + 447 NA promoter-TSS (NM_032869) promoter-TSS (NM_032869) 62 NM_032869 84955 Hs.380291 NM_032869 HPRD:16200 NUDCD1 CML66|OVA66 NudC domain containing 1 protein-coding 0.072968 0.582781 -145(AGCCGCCA,-,0.00),74(AGCCGCCA,-,0.00) 54(TTCACCCG,-,0.00) -81(GGCAGCCGAAAG,+,0.00) 391(GACCCCGCCC,-,0.00) -143(CCGCCACG,-,0.00) -144(GCCGCCACGGTG,+,0.00) -46(GCGCCGCCGC,-,0.00) 561_WT_peak_908 chr10 22518324 22518644 + 447 NA Intergenic tRNA-Asn-AAC|tRNA|tRNA -19572 NM_001199938 340900 Hs.450519 NM_001199938 ENSG00000223601 EBLN1 EBLN-1 endogenous Bornavirus-like nucleoprotein 1 protein-coding 0.050000 0.489097 18(AGAGACTT,-,0.00) -7(CGAACGCG,-,0.00) 561_WT_peak_7509 chrX 18692903 18693228 + 447 NA Intergenic tRNA-Val-GTA|tRNA|tRNA -2842 NM_000330 6247 Hs.715725 NM_000330 HPRD:02426 RS1 RS|XLRS1 retinoschisin 1 protein-coding 0.061538 0.493865 -54(AGCCGCCT,-,0.00) 151(GGCTTCGA,-,0.00) -4(CGTGTAAA,+,0.00) 120(GACCCCGCCC,-,0.00) 561_WT_peak_5548 chr4 89744833 89745205 + 446 NA promoter-TSS (NM_001265580) promoter-TSS (NM_001265580) -507 NM_001265578 10144 Hs.97270 NM_014883 HPRD:10944 FAM13A ARHGAP48|FAM13A1 family with sequence similarity 13, member A protein-coding 0.013441 0.394102 -61(TAGTCGCT,+,0.00),-1(AAGTCTCT,+,0.00) 561_WT_peak_2270 chr14 70233559 70234739 + 445 NA non-coding (NR_029378, exon 1 of 1) non-coding (NR_029378, exon 1 of 1) 281 NR_029378 100289511 Hs.729250 NR_029378 LOC100289511 - uncharacterized LOC100289511 ncRNA 0.083898 0.629128 524(TGGGCCGGGATC,+,0.00) -88(GCCGGCCGAG,+,0.00),222(CTCAGCCGCC,-,0.00) 225(AGCCGCCA,-,0.00),554(ATGCGGCT,+,0.00) 592(CCGAGAAGGGGG,-,0.00) 150(GGCGTAGA,-,0.00),185(TCGACGAC,+,0.00),347(GGCGTCTA,-,0.00),725(GGCGTCGC,-,0.00) 687(GAGCGCCCGCCC,+,0.00) -87(CCGGCCGA,+,0.00) 11(TTCCGGCCCT,+,0.00),524(TGGGCCGGGA,-,0.00) -96(CGGCACCA,-,0.00) 727(CGTCGCGA,+,0.00) 44(GTCCAACG,-,0.00),89(CGTAGGAC,+,0.00) 465(CGGTTGTG,-,0.00) 609(GGGAGGAGAAGG,+,0.00) 714(GGCGCGGT,-,0.00),880(GCTGCGCA,+,0.00),882(TGCGCAGT,-,0.00) 803(GGCGGCTCCGCC,-,0.00) 806(GGCTCCGCCC,-,0.00) 276(CTTCTCGG,+,0.00),592(CCGAGAAG,-,0.00),819(CTTCTCGG,+,0.00) 771(GCCGCCATTGGG,+,0.00) 764(CCGCGAGGCCGC,-,0.00) 561_WT_peak_3674 chr19 17326014 17326510 + 444 NA exon (NM_018467, exon 1 of 8) exon (NM_018467, exon 1 of 8) 107 NM_018467 55850 Hs.16187 NM_018467 HPRD:11299 USE1 P31|SLT1 unconventional SNARE in the ER 1 homolog (S. cerevisiae) protein-coding 0.088710 0.665996 201(AGCCACCT,-,0.00) 212(CCGACTCCCCGG,+,0.00) 42(GGCGTCGA,-,0.00) 23(AGGGCCGGGC,-,0.00) -131(CGCCCGGC,-,0.00),26(GCCGGGCG,+,0.00) -135(ACCGCGCC,+,0.00) 317(CACTGGCCCCGC,-,0.00) 301(GACTCCGCCC,-,0.00) 158(CCGCGTAG,-,0.00),263(CCGCCACG,-,0.00) 83(GCTGCGAGGC,+,0.00) 561_WT_peak_4128 chr2 70313113 70314227 + 443 NA promoter-TSS (NM_006196) promoter-TSS (NM_006196) 477 NR_033872 400960 Hs.683864 NR_033872 ENSG00000179818 PCBP1-AS1 - PCBP1 antisense RNA 1 ncRNA 0.079892 0.598206 256(GGAGGAAGGGGA,-,0.00) 63(GCTTTCGGGCCG,-,0.00) 702(GGCGGCCGTG,+,0.00) 187(TAGCCGCT,+,0.00),188(AGCCGCTT,-,0.00) 35(CCGGGGAGGAAG,-,0.00),162(CAGGGGAGGCGG,-,0.00),190(CCGCTTTCCCTG,+,0.00),746(CCGGGGAGCAGG,-,0.00),860(CCTCCCCCCCGG,+,0.00) 91(GGCGACGA,-,0.00),635(TGGACGCC,+,0.00),852(TCGCCGCC,+,0.00) 908(CGCGCACG,+,0.00),910(CGCACGCG,-,0.00) 421(GCCGCGGG,+,0.00) 67(TCGGGCCG,+,0.00) 321(GGGAAGAACCGG,+,0.00) 90(TGGCGACG,-,0.00) 886(CCCTCCCATCCC,+,0.00) 442(CGGGGAAA,+,0.00),589(TTTAACCG,-,0.00) 431(CCCAGGCCGCGC,-,0.00),839(CGCAGGCCTCGC,-,0.00) 682(AGCAGAGCCGCG,+,0.00) 835(GCTCCGCAGG,-,0.00),849(GCCTCGCCGC,-,0.00) 561_WT_peak_329 chr1 94312799 94313322 + 443 NA promoter-TSS (NM_001261408) promoter-TSS (NM_001261408) -354 NM_001261408 8412 Hs.36958 NM_003567 HPRD:05268 BCAR3 NSP2|SH2D3B breast cancer anti-estrogen resistance 3 protein-coding 0.089866 0.612595 162(AGGTGGCT,+,0.00) 98(GCGGTCGG,-,0.00) 90(CGGGAGGCGCGG,+,0.00) -57(CGTCGGAC,+,0.00) 95(GGCGCGGT,-,0.00) -119(GGCTGGGCCCGG,-,0.00),112(GCGGGGCCGTCG,+,0.00) 561_WT_peak_3132 chr17 34206756 34207283 + 443 NA intron (NM_001278736, intron 1 of 3) intron (NM_001278736, intron 1 of 3) 358 NM_001278736 6352 Hs.514821 NM_002985 HPRD:01751 CCL5 D17S136E|RANTES|SCYA5|SIS-delta|SISd|TCP228|eoCP chemokine (C-C motif) ligand 5 protein-coding 0.003795 0.450758 -150(AGCCACAT,-,0.00) -21(GTCAGACG,-,0.00) 561_WT_peak_1222 chr11 16759518 16760598 + 440 NA promoter-TSS (NM_014267) promoter-TSS (NM_014267) -90 NM_014267 10944 Hs.645792 NM_014267 C11orf58 IMAGE145052|SMAP chromosome 11 open reading frame 58 protein-coding 0.050926 0.541166 517(AGGCCCGGAGGG,+,0.00),902(AGAGCCGGAGAC,+,0.00) 763(CCGGGAAGGGTG,-,0.00) 478(GGCGGCGA,-,0.00) 186(TAGCTACG,-,0.00) 242(CCCTCTAAGCCT,+,0.00),477(GGGCGGCGAGGG,-,0.00) 581(TGGTTTTG,-,0.00) 212(GGGCAGCGTT,+,0.00) 561(CTTGGCGG,+,0.00) 720(GCGGAGTGGCTG,+,0.00) 561_WT_peak_1716 chr12 54674506 54675139 + 440 NA promoter-TSS (NM_012117) promoter-TSS (NM_012117) 289 NR_002944 664709 Hs.534822 NR_002944 HNRNPA1P10 HNRPA1L-2 heterogeneous nuclear ribonucleoprotein A1 pseudogene 10 pseudo 0.061611 0.515773 -101(AAGTCTCT,+,0.00),108(AGGCCGCT,+,0.00) -127(TGGACGCC,+,0.00) 279(CGCGTGCG,+,0.00) 42(TCGGTCGC,-,0.00) 299(TAGGGACG,-,0.00) 285(CGTCGGAA,+,0.00) 260(ACCGCCCA,+,0.00) 48(GCTGCCACGGCC,+,0.00) 561_WT_peak_6307 chr6 36562008 36562577 + 440 NA intron (NR_036610, intron 1 of 6) CpG 202 NM_003017 6428 Hs.405144 NM_003017 SRSF3 SFRS3|SRp20 serine/arginine-rich splicing factor 3 protein-coding 0.065026 0.554386 -22(TGGACGCC,+,0.00) 228(TCCCGGCCCA,+,0.00) 219(GGCGGGGG,+,0.00) 333(GGGAGCCGATAG,+,0.00) 150(CCCAATGGCGGC,-,0.00) 181(GCGCCGCCGC,-,0.00) 561_WT_peak_2644 chr16 686603 687032 + 440 NA promoter-TSS (NM_032366) promoter-TSS (NM_032366) -451 NR_109979 84326 Hs.239500 NM_032366 HPRD:17482 C16orf13 - chromosome 16 open reading frame 13 protein-coding 0.095571 0.609302 -14(GAACCCGGGTCG,-,0.00) 212(GGGAAGGAGCGG,+,0.00) 109(CGCTGGCGCCGG,-,0.00) 102(GCGCCGCCGC,-,0.00) 561_WT_peak_6329 chr6 42846999 42847989 + 439 NA promoter-TSS (NM_198486) promoter-TSS (NM_198486) -177 NM_198486 285855 Hs.520133 NM_198486 HPRD:18000 RPL7L1 dJ475N16.4 ribosomal protein L7-like 1 protein-coding 0.045455 0.528759 682(GGAGGAGGGAGG,-,0.00) 568(GTATCCGGTGCC,-,0.00) -125(AAACGCTT,-,0.00),248(AGGCCGCT,+,0.00) 811(CCCCCGCC,-,0.00) 190(CGTAGCTA,+,0.00),427(CGTCTCTA,+,0.00) 289(GGGTTTTG,-,0.00) 169(GCCGCGCC,+,0.00) 780(CCGACAAG,-,0.00) 243(CAGCCAGGCCGC,-,0.00) 561_WT_peak_2135 chr14 23398759 23399140 + 439 NA promoter-TSS (NM_001282953) promoter-TSS (NM_001282953) 131 NR_110002 101926933 Hs.727321 NR_110002 ENSG00000257285 LOC101926933 - uncharacterized LOC101926933 ncRNA 0.047244 0.492147 41(TCGACTCC,+,0.00) 57(TCGGTGGG,-,0.00),166(TCGGTTGG,-,0.00) 11(CGTCTGAC,+,0.00) 198(TTTTCCCG,-,0.00) -78(ACCGCCCA,+,0.00) 75(GCTTCGCTGC,-,0.00) 561_WT_peak_7533 chrX 47093161 47093500 + 439 NA intron (NM_004651, intron 1 of 20) intron (NM_004651, intron 1 of 20) 1016 NM_004651 8237 Hs.171501 NM_004651 HPRD:02081 USP11 UHX1 ubiquitin specific peptidase 11 protein-coding 0.050147 0.450000 96(AATCGGCT,+,0.00) 39(CTGTTTTG,-,0.00) -34(CCGAGTCG,-,0.00) 561_WT_peak_750 chr1 225654529 225654995 + 435 NA Intergenic Intergenic -38205 NM_194442 3930 Hs.435166 NM_002296 HPRD:02488 LBR DHCR14B|LMN2R|PHA|TDRD18 lamin B receptor protein-coding 0.012876 0.477516 241(AAGCGTCT,+,0.00) -90(TTGTGCCG,+,0.00) 52(CCCTCCCCGCCC,+,0.00) -162(TGGTTTTG,-,0.00),-152(GGGTTTTG,-,0.00) 250(AAGACAGGAAGC,+,0.00) 561_WT_peak_217 chr1 45284971 45285845 + 434 NA TTS (NM_001166292) TTS (NM_001166292) 11254 NM_001136537 149478 Hs.632400 NM_001136537 ENSG00000222009 BTBD19 - BTB (POZ) domain containing 19 protein-coding 0.038902 0.453714 434(AGAGGCCT,-,0.00) -11(CAAAAACG,+,0.00) 561_WT_peak_6178 chr6 26532995 26533348 + 434 NA Intergenic tRNA-Thr-ACY_|tRNA|tRNA -5401 NM_006353 10473 Hs.236774 NM_006353 HMGN4 HMG17L3|NHC high mobility group nucleosomal binding domain 4 protein-coding 0.031161 0.446328 561_WT_peak_4043 chr2 43037370 43038264 + 434 NA Intergenic Intergenic -18066 NM_012205 23498 Hs.368805 NM_012205 HPRD:05158 HAAO 3-HAO|HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding 0.092841 0.659218 -45(CCTCCATCCCCG,+,0.00),13(CCGGGAGCTCGG,-,0.00),615(CCGAGCTCCCGG,+,0.00),660(CCTCGCCCCCGG,+,0.00) 51(GGGCTCGCGCCG,-,0.00),94(GGGCGCCAGCGC,+,0.00) 61(CGCGAACG,+,0.00),63(CGAACGCG,-,0.00) -6(TCGATCGG,-,0.00) 89(GCCGCGGG,+,0.00) -10(CGGCTCGA,-,0.00),22(CGGCGCGA,-,0.00),55(TCGCGCCG,+,0.00) 310(CCTTCTTGTTTC,-,0.00),353(CAAGCAGGAAGC,+,0.00) -106(TGCGCGCT,-,0.00) -142(CGCTGGGGCCGC,-,0.00),52(GGCTCGCGCCGC,-,0.00) -112(CGGGGCTGCGCG,-,0.00) -137(GGGCCGCTCC,+,0.00) -55(CTAGGCGG,+,0.00) -84(GCCCCCGTGGCC,+,0.00) 1(GCTGCGGAAC,+,0.00) 644(GGGCCGGGCCGC,-,0.00) 561_WT_peak_443 chr1 145399125 145399447 + 433 NA intron (NM_001039703, intron 68 of 85) tRNA-Glu-GAG_|tRNA|tRNA -13905 NM_213653 148738 Hs.632436 NM_145277 HPRD:10521 HFE2 HFE2A|HJV|JH|RGMC hemochromatosis type 2 (juvenile) protein-coding 0.043478 0.495356 -39(GAACCCGGGCCG,-,0.00) 68(TCGTGCCT,+,0.00) 151(CAAACCCG,+,0.00) 561_WT_peak_1109 chr10 97889464 97890603 + 433 NA intron (NM_001278525, intron 1 of 5) CpG 220 NM_001278525 9849 Hs.600823 NM_014803 ZNF518A ZNF518 zinc finger protein 518A protein-coding 0.070237 0.592982 599(CCGCGCTCCCCG,+,0.00) 776(TCGACGGC,+,0.00) 72(CAGACCGA,+,0.00) 627(CGGAGGAAGGGG,+,0.00) 783(CGTCCCTA,+,0.00) 69(CGTCAGAC,+,0.00) 473(CGCTTTTG,-,0.00) 119(CAGGTAAA,+,0.00) 646(GGCGCGGT,-,0.00) 9(CGCCGGGGCCGC,-,0.00),792(TGCTGGCCCAGC,-,0.00),793(GCTGGCCCAGCG,+,0.00) 771(CCGACTCG,-,0.00) 658(GGGGCGAAGC,+,0.00) 721(CAGCAAGGGCGC,-,0.00) 561_WT_peak_5346 chr3 185655027 185655761 + 432 NA intron (NM_004593, intron 1 of 8) CpG 530 NM_001243879 6434 Hs.533122 NM_004593 TRA2B Htra2-beta|PPP1R156|SFRS10|SRFS10|TRA2-BETA|TRAN2B transformer 2 beta homolog (Drosophila) protein-coding 0.091281 0.624490 198(AGCCACAT,-,0.00) 296(CTGCCCTCCCGG,+,0.00) 49(GCCCGCCAGCCC,+,0.00) 417(CGTACCCG,-,0.00) 212(GCCGGGGG,+,0.00) 544(CCGCACGA,-,0.00) 71(CGGCGGAC,+,0.00),351(GGCCGACG,-,0.00) 124(CAACACCG,+,0.00) 172(CGGGAAAA,+,0.00) -2(CGCGTTGCCGCG,+,0.00) -27(AGCGCGGCCC,-,0.00),-6(GGTCCGCGTT,+,0.00) 185(CGTCTCGG,+,0.00) 530(GCTCCGCCGC,-,0.00) 561_WT_peak_2520 chr15 66161240 66161603 + 432 NA promoter-TSS (NM_004663) promoter-TSS (NM_004663) -376 NM_001206836 8766 Hs.321541 NM_004663 HPRD:05715 RAB11A YL8 RAB11A, member RAS oncogene family protein-coding 0.038567 0.469780 167(AGCCGCTT,-,0.00) 176(CGGCACGG,-,0.00) 86(CCTTCGGCTGTC,-,0.00) 110(AACCCCGCCC,-,0.00) 66(CCGCCACG,-,0.00) 561_WT_peak_7643 chrY 2802993 2804221 + 431 NA promoter-TSS (NM_001145275) promoter-TSS (NM_001145275) 89 NM_003411 7544 Hs.522845 NM_003411 HPRD:02466 ZFY ZNF911 zinc finger protein, Y-linked protein-coding 0.107492 0.685924 228(CCTCCCTCCGCC,+,0.00) 882(GCCTCCGGCGCG,-,0.00) 731(TGGCGGCT,+,0.00),787(AGCCGCCA,-,0.00),972(AGACGCCT,-,0.00) 412(GCGCCCTCCCGC,+,0.00) 64(GGCGCCGA,-,0.00),77(GGCGCCGA,-,0.00),446(TCGGCGCC,+,0.00),448(GGCGCCGA,-,0.00),587(GGGGTCGA,-,0.00),591(TCGACACC,+,0.00) -37(CGGCGGGCGCGC,-,0.00),436(GGCGTGGCGCTC,-,0.00) 960(CGCGTACG,+,0.00) 308(CCGACCGC,+,0.00),323(TCCGTCGG,-,0.00) 347(CCCGCGGC,-,0.00),353(GCCGCGGG,+,0.00) 175(CCGTGCCG,+,0.00),616(CGGCACGG,-,0.00),887(CGGCGCGA,-,0.00) 95(GGGCGGAGGGGG,-,0.00),1005(CCCTCACAGCCC,+,0.00) 824(CGGTTATG,-,0.00) 862(GCGGCGGCGGCG,+,0.00),868(GCGGCGGCAGCG,+,0.00) 782(GGCGGAGCCGCC,+,0.00) -91(GGGCCGCTTG,+,0.00),190(GGGCCGCTTT,+,0.00),212(AACTCGGCCC,-,0.00),255(AGCCCGGCCC,-,0.00),674(GGGCCTATTT,+,0.00) 699(CCGCGAAG,-,0.00),928(CTTGGCGG,+,0.00) 353(GCCGCGGGGC,+,0.00),511(GCTGCGGAGG,+,0.00) 561_WT_peak_1441 chr11 85463858 85464338 + 430 NA intron (NM_001289608, intron 1 of 18) intron (NM_001289608, intron 1 of 18) 5014 NM_001162951 54843 Hs.369520 NM_032379 HPRD:10260 SYTL2 CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A synaptotagmin-like 2 protein-coding 0.008333 0.422037 561_WT_peak_6435 chr6 111279459 111280188 + 429 NA promoter-TSS (NM_138408) promoter-TSS (NM_138408) 60 NM_138408 112495 Hs.418520 NM_138408 HPRD:12886 GTF3C6 C6orf51|TFIIIC35|bA397G5.3 general transcription factor IIIC, polypeptide 6, alpha 35kDa protein-coding 0.087791 0.635616 361(GGCGGACGAG,+,0.00) 296(TGGCGGCT,+,0.00) 163(TCGGCGCC,+,0.00) 88(CACCCCCAGCCC,+,0.00) 339(GCCGCGGG,+,0.00) 243(CGGCAGGA,-,0.00) 360(CGGCGGAC,+,0.00) -71(CGGGTCAA,+,0.00) 224(TGCGCGGC,-,0.00) 353(GCGGCGGCGGCG,+,0.00) 297(GGCGGCTCCGGG,-,0.00),333(CGAGGCGCCGCG,+,0.00),333(CGAGGCGCCGCG,-,0.00),543(CGAGGAGCCGGG,+,0.00) 346(GACCATGGCGGC,-,0.00) 67(GCTCCGCTGC,-,0.00) 561_WT_peak_4263 chr2 113032942 113033661 + 428 NA 5' UTR (NM_198581, exon 1 of 12) 5' UTR (NM_198581, exon 1 of 12) 123 NM_198581 376940 Hs.190477 NM_198581 HPRD:15698 ZC3H6 ZC3HDC6 zinc finger CCCH-type containing 6 protein-coding 0.105702 0.668056 358(GGCGGCCGGG,+,0.00) 80(AGCCGCCT,-,0.00) 162(CCGCCCGCCCGC,+,0.00),221(CCGGCAGCGCGG,-,0.00) -127(TCGCCGCC,+,0.00),192(GGCGGCGA,-,0.00) 210(GAGCGGCAGCGC,+,0.00) 523(TCTGTCGG,-,0.00) -123(CGCCCGGC,-,0.00) 77(TCGAGCCG,+,0.00),487(GGGCACGA,-,0.00) 150(CGTCGCTG,+,0.00) 81(GCCGCCTGTTTC,-,0.00) -122(GCCCGGCCCCGC,-,0.00),378(CGCAGGCGGCGC,-,0.00),401(CCCGCGCCCCGC,-,0.00),416(CGCCGGCCTCGC,-,0.00) -70(AGACCCGCCC,-,0.00),441(AGCCCCGCCC,-,0.00) 147(CCGCGTCG,-,0.00) 97(GCCGCCATGTTG,+,0.00) 149(GCGTCGCTGC,-,0.00),406(GCCCCGCCGC,-,0.00) 561_WT_peak_2466 chr15 45490644 45491213 + 428 NA intron (NM_138356, intron 2 of 7) intron (NM_138356, intron 2 of 7) 2445 NM_138356 90525 Hs.310399 NM_138356 HPRD:14272 SHF - Src homology 2 domain containing F protein-coding 0.063269 0.535088 1(TGACTCGGATTC,+,0.00),382(TGCCCCGGAGAC,+,0.00) 251(TAGCCACG,-,0.00) 237(CTGTTTTG,-,0.00) 77(GGGACCCGTAGG,+,0.00) 561_WT_peak_2402 chr15 22461008 22461732 + 428 NA Intergenic Intergenic 47908 NR_028067 390539 Hs.666555 NR_028067 ENSG00000259435 OR4N3P OR15-2 olfactory receptor, family 4, subfamily N, member 3 pseudogene pseudo 0.022099 0.626207 561_WT_peak_4528 chr2 242448000 242448657 + 427 NA promoter-TSS (NM_006374) promoter-TSS (NM_006374) -218 NM_001282308 10494 Hs.516807 NM_006374 HPRD:03770 STK25 SOK1|YSK1 serine/threonine kinase 25 protein-coding 0.123288 0.720365 -89(CACTCCGGGCCC,-,0.00),-83(GGGCCCGGAAGC,+,0.00) 172(GGCGGCCGCG,+,0.00),274(CGCGGCCGCC,-,0.00) 243(GCGCCCTCCCCG,+,0.00) -137(GGCGTCGC,-,0.00),152(GGCGTCGT,-,0.00) -28(GGGCCGGGGCTC,-,0.00) -125(CGCGCACG,+,0.00) 258(CGCCACGA,-,0.00),306(CGGCACGG,-,0.00) 40(CTGCGTCTCCCG,-,0.00) -64(CGTTGGAC,+,0.00),160(CTCCGACG,-,0.00) -127(CCCGCGCA,+,0.00),-95(ACCGCCCA,+,0.00),207(TGCGCAGC,-,0.00),278(GCCGCCCA,+,0.00) 51(GGCAGGCCGCGC,-,0.00),244(CGCCCTCCCCGC,-,0.00) 360(GACCCCGCCC,-,0.00) -135(CGTCGCGG,+,0.00),252(CCGCCTCG,-,0.00) 385(GGCCAGGGCGCA,-,0.00) -136(GCGTCGCGGC,-,0.00),-8(GCCGCGAGGC,+,0.00) 49(CCGGCAGGCCGC,-,0.00) 561_WT_peak_4534 chr20 277845 278510 + 425 NA promoter-TSS (NM_033089) promoter-TSS (NM_033089) -27 NM_033089 85364 Hs.28608 NM_033089 HPRD:15701 ZCCHC3 C20orf99 zinc finger, CCHC domain containing 3 protein-coding 0.130827 0.708709 302(CGAGGAGGCCGA,-,0.00) 315(GGCGGCCGCG,+,0.00),388(CGCGGCCGCC,-,0.00),441(CTCGGCGGCC,-,0.00) 145(CCCGGCGGGCGG,-,0.00),203(CTGGGAAGGAGG,-,0.00) 151(GGGCGGGCGCGC,-,0.00) 89(GGCGGGGG,+,0.00),288(CCCGCGGC,-,0.00) 267(CAGCTTCTGCCC,-,0.00) 135(CCCACACAGCCC,+,0.00) 308(GGCCGACG,-,0.00),466(CGCCGGAC,+,0.00) -67(CAAACCCG,+,0.00) 84(GGCGCGGC,-,0.00) 282(GCGCGGCCCGCG,+,0.00),443(CGGCGGCCCCGC,-,0.00) 444(GGCGGCCCCGCG,-,0.00) 361(CCGAGAAG,-,0.00) 455(GGGCCTGGCGGC,-,0.00) 202(GCTGGGAAGG,+,0.00),229(GCGGCGGCGC,+,0.00) 454(CGGGCCTGGCGG,+,0.00) 561_WT_peak_690 chr1 204475510 204476436 + 424 NA Intergenic Intergenic -9534 NM_001278518 4194 Hs.497492 NM_002393 HPRD:04082 MDM4 HDMX|MDMX|MRP1 MDM4, p53 regulator protein-coding 0.033477 0.416397 -8(TCAGTCGG,-,0.00),538(CCGACTGA,+,0.00) -97(CAAAACTG,+,0.00) 561_WT_peak_2501 chr15 59225516 59225876 + 422 NA exon (NM_024755, exon 1 of 21) exon (NM_024755, exon 1 of 21) 156 NM_024755 79811 Hs.512932 NM_017968 HPRD:07819 SLTM Met SAFB-like, transcription modulator protein-coding 0.122222 0.692521 -102(CTTTCCGGTCCT,-,0.00),64(CGCACCGGTAGC,+,0.00) 46(GGCGGCCGAG,+,0.00),161(CTCGGCGGCC,-,0.00) -116(TCCCCTTCCCGG,+,0.00) -138(GGCGCCGA,-,0.00) -150(CGGCGGAAGCGG,+,0.00) -54(CGGTCTTG,-,0.00) -130(GGCGCGGC,-,0.00),177(GCCGCGCA,+,0.00),187(GCTGCGCA,+,0.00) 170(CGCCGGCGCCGC,-,0.00) -136(CGCCGAGGCGCG,+,0.00) 43(CGAGGCGG,+,0.00) 158(GGCCTCGGCGGC,-,0.00) 177(GCCGCGCAGC,-,0.00) 152(CACCCAGGCCTC,-,0.00) 561_WT_peak_3193 chr17 41445080 41445507 + 422 NA Intergenic U2|snRNA|snRNA 20973 NR_027412 100130581 Hs.546897 NR_027412 ENSG00000188825 LINC00910 - long intergenic non-protein coding RNA 910 ncRNA 0.030445 0.408879 109(CAAAACCC,+,0.00) 561_WT_peak_6319 chr6 41903836 41904342 + 421 NA intron (NM_001287434, intron 4 of 4) intron (NM_001287434, intron 4 of 4) 5497 NM_001760 896 Hs.534307 NM_001760 HPRD:00452 CCND3 - cyclin D3 protein-coding 0.003953 0.573964 -41(AGCCCGGCCC,-,0.00) -42(CAGCCCGGCCCC,-,0.00) 561_WT_peak_1717 chr12 54718942 54719270 + 420 NA intron (NM_001271734, intron 1 of 7) intron (NM_001271734, intron 1 of 7) 232 NM_001271735 22818 Hs.505652 NM_016057 HPRD:16738 COPZ1 COPZ|HSPC181|zeta-COP|zeta1-COP coatomer protein complex, subunit zeta 1 protein-coding 0.027439 0.553191 49(CCGGGGAGAGGG,-,0.00) -99(GGGGCCGGGA,-,0.00) -64(CGGGGAAA,+,0.00),-48(CGGGTAAT,+,0.00) 561_WT_peak_605 chr1 167683699 167684188 + 420 NA Intergenic Intergenic -7244 NM_024569 9019 Hs.493919 NM_003953 HPRD:05086 MPZL1 MPZL1b|PZR|PZR1b|PZRa|PZRb myelin protein zero-like 1 protein-coding 0.073620 0.579592 -65(CCTCCCTGCTCC,+,0.00) -149(AGGCGGCT,+,0.00) -155(GCCGGAAGGCGG,-,0.00) -133(CGCGTGCG,+,0.00) 176(TTTACCCA,-,0.00) -117(GGCCACGCCGGC,-,0.00) 561_WT_peak_4345 chr2 160568822 160569492 + 418 NA promoter-TSS (NR_110586) promoter-TSS (NR_110586) 189 NM_001282806 64844 Hs.529272 NM_022826 MARCH7 AXO|AXOT|MARCH-VII|RNF177 membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase protein-coding 0.086567 0.682563 -1(GGAGCAGGGAGG,-,0.00) 269(AGAGGCCT,-,0.00),287(AGGCCGCT,+,0.00) 275(CTGGGGACGCGG,-,0.00) -107(GAGCACCACCCC,+,0.00) 379(TTGGTCGG,-,0.00) 53(AGGGGCGGGC,-,0.00) -54(GCCGCGCC,+,0.00) 325(CCGGGGCCACCG,+,0.00) -20(CCGCGAAG,-,0.00) 71(GCTTCGCTGC,-,0.00),194(GCTGCGGAGC,+,0.00) -80(CAGCCCGCCCGC,-,0.00) 561_WT_peak_6965 chr8 29939941 29940662 + 415 NA intron (NM_016127, intron 1 of 5) CpG 423 NM_016127 51669 Hs.521487 NM_016127 HPRD:08651 SARAF FOAP-7|TMEM66|XTP3 store-operated calcium entry-associated regulatory factor protein-coding 0.090153 0.660665 -4(GAGTCCGGGGCA,-,0.00),142(GAATCCGGGCAC,-,0.00),395(GCCTACGGGCCG,-,0.00) 80(AGACGCCT,-,0.00),391(AGACGCCT,-,0.00) 161(CCGGGAAGACGG,-,0.00) 461(GGCGGCGA,-,0.00) 509(GTGCGCCAACCC,+,0.00) 394(CGCCTACG,+,0.00) 275(AGGGCAGGGC,-,0.00),337(TCCCGGCCCG,+,0.00) 474(CGGCCCGA,-,0.00) -137(GCAACAGGCAGC,+,0.00) 433(GCTGCGCA,+,0.00),435(TGCGCAGC,-,0.00) 277(GGCAGGGCCCGC,-,0.00),278(GCAGGGCCCGCG,+,0.00) 240(GGCCCTGGCAGC,-,0.00),353(GCGGCCATGGCG,+,0.00),355(GGCCATGGCGCT,-,0.00),452(ACCCCTGGCGGC,-,0.00) 433(GCTGCGCAGC,+,0.00),433(GCTGCGCAGC,-,0.00),462(GCGGCGAAGG,+,0.00) 561_WT_peak_6627 chr7 26239294 26240357 + 415 NA intron (NM_031243, intron 1 of 11) CpG 588 NM_031243 3181 Hs.487774 NM_002137 HPRD:02526 HNRNPA2B1 HNRNPA2|HNRNPB1|HNRPA2|HNRPA2B1|HNRPB1|IBMPFD2|RNPA2|SNRPB1 heterogeneous nuclear ribonucleoprotein A2/B1 protein-coding 0.076199 0.561090 10(GAAACCGGGCCC,-,0.00),810(CGAACCGGACTC,+,0.00) 210(AACCACTT,-,0.00),653(AGGCGGCT,+,0.00),749(AGTCGCTT,-,0.00) 37(CCCCCCTCCCCG,+,0.00),38(CCCCCTCCCCGC,+,0.00),320(CCGGGAGAGAGG,-,0.00) -19(CCGACGCC,+,0.00) 798(CGCGGACG,+,0.00) 775(CCGAGCGA,+,0.00) -23(CGGCCCGA,-,0.00) -45(GTCCTACG,-,0.00),-21(GCCCGACG,-,0.00) -100(TAAAACCG,+,0.00),23(CAAACCCG,+,0.00),308(CAAATCCG,+,0.00),722(CAAACCCG,+,0.00) -43(CCTACGGCTCGC,-,0.00) 444(CCCGCCTCCGCG,-,0.00) -27(AACCCGGCCC,-,0.00),625(GGTCCGATTT,+,0.00) 188(CCGAGAAG,-,0.00) 70(CGCAATGGCGCC,-,0.00),396(GACGCCGTGGCC,+,0.00),689(CTCGCCATGCCC,+,0.00) 342(GCTCCGCAGC,-,0.00) 561_WT_peak_3819 chr19 47615240 47616506 + 415 NA intron (NM_015168, intron 1 of 14) CpG-14022 1136 NM_015168 23211 Hs.104661 NM_015168 ENSG00000130749 ZC3H4 C19orf7 zinc finger CCCH-type containing 4 protein-coding 0.098736 0.702447 156(TCCTCCTCCTCC,+,0.00),159(TCCTCCTCCTCC,+,0.00),162(TCCTCCTCCTCC,+,0.00),165(TCCTCCTCCTCC,+,0.00),168(TCCTCCTCCTCC,+,0.00),171(TCCTCCTCCTCC,+,0.00),174(TCCTCCTCCTCC,+,0.00),218(TCCTCCTCCTCC,+,0.00),1039(GGCGGAGGCGGA,-,0.00) 969(TGGCGGCT,+,0.00) 178(CCTCCTCCGCGG,+,0.00),241(CCGGGGACGCAG,-,0.00),710(CCCGGGGGGCGG,-,0.00),927(CCGGCTGCCCGG,+,0.00) 330(GGCGTCGG,-,0.00),358(GGCGTTGA,-,0.00),373(GGCGGCGA,-,0.00),388(GGCGGCGA,-,0.00),618(TCGCCGCC,+,0.00) 250(CAGCCCCGGCCC,+,0.00) 582(CGCGTAGG,+,0.00) 139(CCCACCGA,+,0.00) 322(GCCGGGCG,+,0.00),409(GGCGGGGG,+,0.00),939(CCCCCGCC,-,0.00) 977(CGGCCCGA,-,0.00) 803(GGGGAGAAGAGG,+,0.00) 903(CCTTCTCTGCCC,+,0.00) -20(GTCCGAGG,-,0.00) 552(CGGTTTCG,-,0.00) 286(GGGAGCGGGAGG,+,0.00),348(AGGAGGCGAAGG,+,0.00) 424(GGCGCGGC,-,0.00) 322(GCCGGGCGGGCG,+,0.00),368(GCGGCGGCGGCG,+,0.00),383(GCGGCGGCGGCG,+,0.00),768(CGCGGGCCGCGC,-,0.00) 880(CGCGGAGACGGG,+,0.00) 145(GACCCCGCCC,-,0.00),973(GGCTCGGCCC,-,0.00) 489(CGTGGCGG,+,0.00),581(CCGCGTAG,-,0.00) -64(CCCCACGGCGCC,-,0.00),197(CAACATGGCGGC,-,0.00),376(GGCGATGGCGGC,-,0.00),486(GGGCGTGGCGGG,-,0.00) -77(TCTCCGCAGC,-,0.00),631(TCTCCGCAGC,-,0.00) -96(CAGCCAGGACCC,-,0.00),186(GCGGCCCGGCCC,+,0.00) 561_WT_peak_6724 chr7 75157450 75157763 + 412 NA promoter-TSS (NR_028059) promoter-TSS (NR_028059) -153 NR_028059 5387 Hs.659871 NM_005395 HPRD:17866 PMS2P3 PMS2L3|PMS2L9|PMS5|PMSR3 postmeiotic segregation increased 2 pseudogene 3 pseudo 0.057508 0.582803 -8(CGGTTTTA,-,0.00) -154(AGCGCGCA,+,0.00) -162(GCGGCGGCAGCG,+,0.00) -11(GGGCGGTTTT,+,0.00) 12(CCGCCTAG,-,0.00) 561_WT_peak_3038 chr17 8124809 8125047 + 410 NA intron (NR_026951, intron 2 of 2) CpG 2433 NR_026951 284029 Hs.121692 NM_173621 HPRD:08755 LINC00324 C17orf44|NCRNA00324 long intergenic non-protein coding RNA 324 ncRNA 0.058824 0.539749 -64(TGACCCGGGTTC,+,0.00) -11(CCCCCGCC,-,0.00) -65(TTGACCCG,-,0.00) 561_WT_peak_591 chr1 161493547 161493852 + 410 NA promoter-TSS (NM_002155) promoter-TSS (NM_002155) -337 NM_002155 3310 Hs.654614 NM_002155 HPRD:00775 HSPA6 - heat shock 70kDa protein 6 (HSP70B') protein-coding 0.036066 0.411765 -57(GAACCCGGGCCT,-,0.00) -154(AGCCACCT,-,0.00) 84(CGGTTTGG,-,0.00) 561_WT_peak_3038-2 chr17 8125101 8125791 + 410 NA intron (NR_026951, intron 2 of 2) intron (NR_026951, intron 2 of 2) 1915 NR_026951 284029 Hs.121692 NM_173621 HPRD:08755 LINC00324 C17orf44|NCRNA00324 long intergenic non-protein coding RNA 324 ncRNA 0.049275 0.532562 -125(CGTCGGAA,+,0.00) 275(CAAAACTG,+,0.00) -61(GGGAGGCGAAAG,+,0.00) -118(ATCTCGGCCC,-,0.00) 561_WT_peak_7168 chr8 135724816 135725915 + 409 NA promoter-TSS (NM_001289394) promoter-TSS (NM_001289394) -73 NM_001174157 57623 Hs.446172 NM_020863 HPRD:11712 ZFAT AITD3|ZFAT1|ZNF406 zinc finger and AT hook domain containing protein-coding 0.106460 0.647273 -48(TCGCTCTCCTCC,+,0.00),302(TCGCCCTCCTCC,+,0.00) -34(AGACCCGGATCC,+,0.00),165(TCTTCCGGGCCC,-,0.00) 581(GGCCGCCGAG,+,0.00) 37(AAACGGCT,+,0.00),38(AACGGCTT,-,0.00),325(AGACGCCT,-,0.00),542(AGGCCTCT,+,0.00),810(AGCGGCCT,-,0.00) 190(CCGAGGGGGCGG,-,0.00) 27(TCGACGCT,+,0.00),368(GGCGCCGA,-,0.00) 186(CCGACCGA,+,0.00) -149(GCCGGGCG,+,0.00),363(CCCCCGGC,-,0.00),567(CCCGCGGC,-,0.00) 181(CCGTGCCG,+,0.00) 77(CCGTCTCACCCC,+,0.00) 532(CGGTTGTG,-,0.00) 53(GCCGCGCC,+,0.00),58(GCCGCGCC,+,0.00) -20(CCGCGGCCGGCG,+,0.00) 52(CGCCGCGCCGCG,+,0.00),52(CGCCGCGCCGCG,-,0.00),452(CGCTGCGCCGCG,+,0.00),452(CGCTGCGCCGCG,-,0.00) 375(AGCGCGGCCC,-,0.00),389(GGGCCGAGCT,+,0.00),456(GCGCCGCGTT,+,0.00) 22(CCGACTCG,-,0.00) 453(GCTGCGCCGC,+,0.00),453(GCTGCGCCGC,-,0.00) 378(GCGGCCCGGCAG,+,0.00) 561_WT_peak_663 chr1 192775029 192775309 + 409 NA Intergenic Intergenic -3000 NM_002923 5997 Hs.78944 NM_002923 HPRD:02917 RGS2 G0S8 regulator of G-protein signaling 2 protein-coding 0.000000 0.384342 -38(AGGTTTTG,-,0.00) 561_WT_peak_6289 chr6 32937875 32939603 + 407 NA promoter-TSS (NM_001199455).5 promoter-TSS (NM_001199455).5 74 NM_001113182 6046 Hs.75243 NM_005104 HPRD:03326 BRD2 D6S113E|FSH|FSRG1|NAT|RING3|RNF3 bromodomain containing 2 protein-coding 0.048611 0.581839 623(GGAGGAGGGGGA,-,0.00),670(TCGCCCTCCTCC,+,0.00) 246(CCTTCCGGGGCG,-,0.00) -40(AGGCCTCT,+,0.00),1377(AGGCGTCT,+,0.00) 95(CCGCCCTCCCGG,+,0.00) 688(CTGACCGA,+,0.00) 92(CCCCCGCC,-,0.00),603(GCCGGGGG,+,0.00),740(GGCGGGGG,+,0.00) 1472(TGGCACGA,-,0.00) 657(CCGCCTCCTCCG,-,0.00) 338(TAGCGAAG,-,0.00) 250(CCGGGGCGAGGG,+,0.00),429(GCGGGGACGGCC,+,0.00) 14(GGGCCGCTTG,+,0.00) 115(CTACTCGG,+,0.00),762(CGTGGCGG,+,0.00) 32(GGGGCCAGGGCC,+,0.00) 561_WT_peak_1124 chr10 103124552 103124786 + 407 NA intron (NM_003939, intron 1 of 13) U2|snRNA|snRNA 10879 NM_033637 8945 Hs.643802 NM_003939 HPRD:04596 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding 0.025641 0.404255 -39(TCTCCCTGCTCC,+,0.00) 561_WT_peak_3843 chr19 49375549 49376292 + 406 NA intron (NM_014330, intron 1 of 2) CpG 271 NM_014330 23645 Hs.631593 NM_014330 HPRD:06572 PPP1R15A GADD34 protein phosphatase 1, regulatory subunit 15A protein-coding 0.061911 0.592742 383(GGAGGAGGGTGT,-,0.00) 237(GGGCCCGGATTT,+,0.00) 80(CCGACGCC,+,0.00) 146(CAGACCGA,+,0.00) -81(GCCGGGCG,+,0.00) -96(TCGTGACG,+,0.00),9(CTGCACGA,-,0.00) 78(GCCCGACG,-,0.00) -77(GGCGCGGT,-,0.00) 561_WT_peak_3843-2 chr19 49376441 49376670 + 406 NA exon (NM_014330, exon 2 of 3) exon (NM_014330, exon 2 of 3) 906 NM_014330 23645 Hs.631593 NM_014330 HPRD:06572 PPP1R15A GADD34 protein phosphatase 1, regulatory subunit 15A protein-coding 0.017467 0.608696 -15(AGCCGCCT,-,0.00) -26(GCCGCGCC,+,0.00) 12(GAGCCCTGGCTG,+,0.00) 561_WT_peak_2667 chr16 3200473 3200924 + 403 NA Intergenic tRNA-Arg-CGG|tRNA|tRNA 15564 NM_001134655 7760 Hs.115284 NM_004220 HPRD:12224 ZNF213 CR53|ZKSCAN21|ZSCAN53 zinc finger protein 213 protein-coding 0.084257 0.615044 241(TCGCCCTGCGCC,+,0.00) 67(GATTCCGGATCA,-,0.00) 59(AGGCGTCT,+,0.00) -142(CCCGCGGC,-,0.00) -62(CGGAAGGACCGG,+,0.00) -103(GGCGCGGT,-,0.00) -99(CGGTGGCCCAGC,-,0.00) 33(CGCAGGGCCGCG,+,0.00) 37(GGGCCGCGTG,+,0.00) -110(GCGGCCCGGCGC,+,0.00) 561_WT_peak_4737 chr21 9825912 9826356 + 402 NA promoter-TSS (NR_037458) promoter-TSS (NR_037458) -69 NR_037458 100500815 NR_037458 miRBase:MI0016088 MIR3687-1 MIR3687 microRNA 3687-1 ncRNA 0.182432 0.806742 195(TCGACCTCCGCC,+,0.00) -67(GCGCCTTCCCCG,+,0.00),93(CCGTCCTCCCCG,+,0.00),202(CCGCCTTGCCGG,+,0.00) 72(GGCGTCGG,-,0.00),78(GGCGTCGG,-,0.00),108(GGCGTCGC,-,0.00) 129(CGCGTGCG,+,0.00) -127(GCGGTCGG,-,0.00) -22(TCCCGGCCCG,+,0.00),31(TCCCGGGCCT,+,0.00) 176(GTGCGACG,-,0.00) 224(TTTCCCCG,-,0.00) 141(AGCGCGGCCC,-,0.00) 561_WT_peak_2516 chr15 65596739 65597563 + 402 NA Intergenic Intergenic -18133 NM_017851 54956 Hs.30634 NM_017851 HPRD:07919 PARP16 ARTD15|C15orf30|pART15 poly (ADP-ribose) polymerase family, member 16 protein-coding 0.030340 0.390303 291(GTTTTCGGTTCT,-,0.00) 309(AAACGCTT,-,0.00) 296(CGGTTCTG,-,0.00) 78(GTTACCCG,-,0.00),479(TGGGTAAA,+,0.00) 445(GGCGCGGT,-,0.00) 217(CCGACAAG,-,0.00) 561_WT_peak_445 chr1 145507115 145507873 + 401 NA promoter-TSS (NM_005105) promoter-TSS (NM_005105) -63 NM_005105 9939 Hs.591455 NM_005105 HPRD:05609 RBM8A BOV-1A|BOV-1B|BOV-1C|C1DELq21.1|DEL1q21.1|MDS014|RBM8|RBM8B|TAR|Y14|ZNRP|ZRNP1 RNA binding motif protein 8A protein-coding 0.048813 0.500659 535(TCGGTCGT,-,0.00) 561_WT_peak_6024 chr5 173043605 173043934 + 401 NA promoter-TSS (NM_001159651) promoter-TSS (NM_001159651) -103 NM_138369 91272 Hs.425091 NM_138369 HPRD:13309 BOD1 FAM44B biorientation of chromosomes in cell division 1 protein-coding 0.082067 0.609091 -14(AGCGGCCT,-,0.00) -85(GGCGTCAA,-,0.00) 36(CGTCGCGA,+,0.00) -13(GCGGCCTAGCCG,+,0.00) 561_WT_peak_7538 chrX 48432529 48433336 + 400 NA 5' UTR (NM_006743, exon 1 of 7) 5' UTR (NM_006743, exon 1 of 7) 191 NM_006743 5935 Hs.301404 NM_006743 RBM3 IS1-RNPL|RNPL RNA binding motif (RNP1, RRM) protein 3 protein-coding 0.083024 0.591584 -56(AGCCGGTT,-,0.00),625(TGGCGGCT,+,0.00) -4(TCGACCCC,+,0.00),486(GGCGTCGG,-,0.00) 426(TCGGTTGG,-,0.00) -53(CGGTTGTG,-,0.00) 75(CCTTCCTCTCCC,-,0.00) 316(GCCGCGCC,+,0.00),599(TGCGCAGT,-,0.00) 294(GGCGGCTCCTCG,-,0.00) 623(CGTGGCGG,+,0.00) 620(GGGCGTGGCGGC,-,0.00) 561_WT_peak_828 chr1 244997643 244998844 + 399 NA promoter-TSS (NM_198076) promoter-TSS (NM_198076) -396 NM_198076 116228 Hs.411490 NM_198076 HPRD:13307 COX20 FAM36A COX20 cytochrome C oxidase assembly factor protein-coding 0.072440 0.551581 684(CCTTCCGGGTCG,-,0.00),816(CGCGCCGGAGAC,+,0.00) 661(GGCCGCCGAG,+,0.00) 492(AGCCACTT,-,0.00) 681(GCGCCTTCCGGG,+,0.00) 698(GGGCTGGGGCGG,-,0.00),715(GGGCTGGGGCCG,-,0.00),858(GGGCTGGCGCGG,-,0.00) 693(TCGGTGGG,-,0.00) 957(TCCCGCCCCT,+,0.00) 606(CGGCACCA,-,0.00),619(TCGTCCCG,+,0.00) 942(CATCTCCTTCCG,-,0.00) 1004(GTTCGACG,-,0.00) 947(CCTTCCGCTCTC,-,0.00) 15(AGCGCGCA,+,0.00),474(TGCGCGGT,-,0.00) 665(GCCGAGCCAGCG,+,0.00) 1028(AGCCCGGCCC,-,0.00) 561_WT_peak_2945 chr16 87984417 87984861 + 399 NA promoter-TSS (NM_001173539) promoter-TSS (NM_001173539) -399 NM_001173541 54971 Hs.461705 NM_017869 HPRD:16538 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding 0.063063 0.617978 67(GCAGGCATGGCC,+,0.00) 561_WT_peak_3015 chr17 7386699 7387336 + 398 NA promoter-TSS (NM_000937) promoter-TSS (NM_000937) 551 NM_020899 57659 Hs.35096 NM_020899 HPRD:11693 ZBTB4 KAISO-L1|ZNF903 zinc finger and BTB domain containing 4 protein-coding 0.050235 0.573668 -52(ATGTGGCT,+,0.00),224(AAGTCTCT,+,0.00) 333(CGGCTACTTCCG,-,0.00) -5(GTCCTACG,-,0.00) 23(CCTTGGGATCCC,-,0.00) 212(GCCTCCCAGC,-,0.00),444(GCCCCGCCGC,-,0.00) 561_WT_peak_909 chr10 22540892 22541742 + 396 NA non-coding (NR_038921, exon 1 of 1) non-coding (NR_038921, exon 1 of 1) 316 NR_038921 100130992 Hs.48501 NR_038921 LOC100130992 - uncharacterized LOC100130992 ncRNA 0.078824 0.633373 -117(CCTCCCTGCTCC,+,0.00) 441(CGGCCCGGAGGG,+,0.00) 293(AGACACCT,-,0.00) 360(CCCCCTCCCCGG,+,0.00),484(CAGGGGACGCGG,-,0.00) 388(CAGCGCCAGCCC,+,0.00),471(CCGCGGCAGCCC,+,0.00) 346(AGGCCCGGGC,-,0.00),438(GCCCGGCCCG,+,0.00) -80(GCCGGGCG,+,0.00),-76(GGCGGGGG,+,0.00),321(GGCGGGGG,+,0.00),470(CCCGCGGC,-,0.00) 16(GAAAACCG,+,0.00),220(CGCTTTTG,-,0.00),231(GGGTTTTG,-,0.00) 22(CGAGTAAA,+,0.00) -51(GGAACAAGAAGC,+,0.00),-15(GAAAGAGGAACC,+,0.00) 353(GGCGCGGC,-,0.00),384(TGCGCAGC,-,0.00),658(TGCGCGGG,-,0.00) 310(CGCAGGGCCCGG,-,0.00),391(CGCCAGCCCCGC,-,0.00) 464(CGGGGCCCCGCG,-,0.00) 353(GGCGCGGCCC,-,0.00) 429(CCGACTCG,-,0.00),430(CGACTCGG,+,0.00) 468(GCCCCGCGGC,-,0.00) 368(CCGGCCTGGCGG,+,0.00) 561_WT_peak_5244 chr3 128399456 128400246 + 396 NA Intergenic CpG -30132 NM_002950 6184 Hs.518244 NM_002950 HPRD:01598 RPN1 OST1|RBPH1 ribophorin I protein-coding 0.087342 0.644753 25(AGCCGCCA,-,0.00),226(AGAGGCTT,-,0.00),316(AGGTGTCT,+,0.00) 176(CGTATGCG,-,0.00),434(CGCGTGCG,+,0.00) 42(GGAAGCCGAATG,+,0.00) 612(ACTTCCTTTTTC,-,0.00) -38(ACTGCGCA,+,0.00) 425(CCCTGTCCCCGC,-,0.00) 103(CGCGGAGTCGCC,+,0.00),377(CGCGGGGCTGCG,+,0.00) 478(GGGCCGCCTT,+,0.00),489(GGGCCGAGTT,+,0.00) 27(CCGCCAAG,-,0.00) 480(GCCGCCTTGGGG,+,0.00) 383(GCTGCGGAGG,+,0.00) 561_WT_peak_4949 chr22 42475278 42476057 + 395 NA promoter-TSS (NM_033318) promoter-TSS (NM_033318) -28 NM_033318 91689 Hs.306083 NM_033318 HPRD:12385 SMDT1 C22orf32|DDDD|EMRE|dJ186O1.1 single-pass membrane protein with aspartate-rich tail 1 protein-coding 0.088575 0.647436 163(CCTCCCTCCCGC,+,0.00) 250(TCGGGCGG,-,0.00) 208(AGGGCTGGGC,-,0.00),280(AGGGCTGGGC,-,0.00) -138(CGCCCGGC,-,0.00),57(GCCGGGCG,+,0.00) 130(TCGTGACG,+,0.00),273(CGGCACGA,-,0.00) 27(CACAACCG,+,0.00),69(CAAGACCG,+,0.00),503(CCAAACCG,+,0.00) -33(CGGTTAAA,+,0.00),478(GTTACCCG,-,0.00) 3(CCTTCCGCTCCC,-,0.00) 285(TGGGCGGT,-,0.00) 252(GGGCGGCTTT,+,0.00),315(GGGCGGAGCT,+,0.00),579(GGGCGGCGCT,+,0.00) -150(GCCCAAGGCGGG,-,0.00),327(GGGCATGGCGTC,-,0.00) -107(GCCCCGCAGC,-,0.00),115(GCTGCGCCGC,+,0.00),115(GCTGCGCCGC,-,0.00) 561_WT_peak_1403 chr11 72145235 72145817 + 395 NA 5' UTR (NM_001258394, exon 1 of 18) 5' UTR (NM_001258394, exon 1 of 18) 198 NM_001258393 81570 Hs.523877 NM_030813 HPRD:11560 CLPB HSP78|SKD3 ClpB caseinolytic peptidase B homolog (E. coli) protein-coding 0.075601 0.619211 190(CGCGTTCG,+,0.00) 145(TGGTGCCG,+,0.00) 371(CGGGTGAA,+,0.00) -19(ACTGCGGCTCCC,-,0.00) -17(TGCGGCTCCCCG,-,0.00) 27(ACCTCCATGGCC,+,0.00),73(AGCCGTGGCGCC,-,0.00) -134(GCCGCGAGGC,+,0.00) 561_WT_peak_2597 chr15 89877835 89878543 + 395 NA promoter-TSS (NM_001126131) promoter-TSS (NM_001126131) -163 NM_002693 5428 Hs.706868 NM_002693 HPRD:01438 POLG MDP1|MIRAS|MTDPS4A|MTDPS4B|PEO|POLG1|POLGA|SANDO|SCAE polymerase (DNA directed), gamma protein-coding 0.100282 0.645980 151(GGAGAAGGGGGA,-,0.00) 326(AGGCGTCT,+,0.00) -127(CCGGCCTCCCCG,+,0.00),-126(CGGCCTCCCCGC,+,0.00) 449(TCGCCGCC,+,0.00) 69(CCCGCGGC,-,0.00) -44(CGGCACGG,-,0.00),364(TCCTGCCG,+,0.00) 149(GGGGAGAAGGGG,+,0.00) -141(CGTCGCTC,+,0.00) 329(CGTCTGAC,+,0.00) -148(GCCGCGCC,+,0.00) -114(CGCCGACCCCGC,-,0.00) 71(CGCGGCTACCCG,-,0.00) -150(GGGCCGCGCC,+,0.00),304(GGGCCGCGTG,+,0.00) 561_WT_peak_1514 chr11 122933284 122934514 + 394 NA promoter-TSS (NM_006597) promoter-TSS (NM_006597) -856 NM_153201 3312 Hs.180414 NM_006597 HPRD:07205 HSPA8 HEL-33|HEL-S-72p|HSC54|HSC70|HSC71|HSP71|HSP73|HSPA10|LAP-1|LAP1|NIP71 heat shock 70kDa protein 8 protein-coding 0.050407 0.536149 175(AGCCGCCA,-,0.00),351(AACCGCTT,-,0.00) 187(GCCGCGGG,+,0.00) 649(TACCGACG,-,0.00) 296(CAGAACCG,+,0.00),348(CGAAACCG,+,0.00) 453(TTTCCCCG,-,0.00) 176(GCCGCCAGGCCG,+,0.00) -51(GCTGCGAAGG,+,0.00),217(GCCTCCCAGC,-,0.00) 177(CCGCCAGGCCGC,-,0.00),282(GGGGCCCGGCTT,+,0.00) 561_WT_peak_5158 chr3 73160027 73160266 + 393 NA Intergenic U2|snRNA|snRNA 49336 NM_018029 55096 Hs.658858 NM_018029 HPRD:07654 EBLN2 EBLN-2 endogenous Bornavirus-like nucleoprotein 2 protein-coding 0.046025 0.470833 56(GGAGCAGGGAGA,-,0.00) -120(AGGCTGGGGCTC,-,0.00) -69(GGCGGGGG,+,0.00) 561_WT_peak_2009 chr13 41706832 41707138 + 391 NA promoter-TSS (NM_152903) promoter-TSS (NM_152903) -49 NM_152903 89890 Hs.534040 NM_152903 HPRD:13758 KBTBD6 - kelch repeat and BTB (POZ) domain containing 6 protein-coding 0.088235 0.596091 -88(AAGCCGCT,+,0.00),-87(AGCCGCTA,-,0.00),36(ATCCGCTT,-,0.00) 561_WT_peak_3556 chr19 1021001 1021762 + 390 NA promoter-TSS (NM_033420) promoter-TSS (NM_033420) -140 NR_125730 103625684 NR_125730 RNU6-2 U6-2 RNA, U6 small nuclear 2 snRNA 0.085414 0.569554 11(CCCCCCTGCGCC,+,0.00) -121(CCCGGCCGCC,-,0.00),-111(ATCGGCCGCC,-,0.00),-73(CCCGGCCGCC,-,0.00),74(CTCGGCCGCT,-,0.00) -103(CCCTCGCAGCCG,+,0.00) -135(GTCCGAGG,-,0.00) 45(GCGGCGCCCGCG,+,0.00) 4(AGAGCGGCCC,-,0.00) -117(GCCGCCATCGGC,+,0.00) -103(CCCTCGCAGC,-,0.00),-37(GCTGCGGCGC,+,0.00) 561_WT_peak_6042 chr5 179050101 179050655 + 390 NA intron (NM_005520, intron 1 of 13) CpG-21533 333 NM_001257293 3187 Hs.604001 NM_005520 HPRD:03021 HNRNPH1 HNRPH|HNRPH1|hnRNPH heterogeneous nuclear ribonucleoprotein H1 (H) protein-coding 0.110108 0.659459 156(TCCGCCTCCTCC,+,0.00) -113(GGCGTCGA,-,0.00),82(TCGGCGCC,+,0.00),246(TCGACGGC,+,0.00) -125(CTTACGCG,-,0.00) 157(CCGCCTCCTCCG,-,0.00) -117(GTCCGGCG,-,0.00),40(GTCCGGCG,-,0.00) -6(AAAAACCG,+,0.00),315(CAAAAACG,+,0.00) -54(CCTTCGCCTCCG,-,0.00) 189(GGCGCGGC,-,0.00) 561_WT_peak_4032 chr2 39356069 39356443 + 390 NA Intergenic L1MB2|LINE|L1 -8652 NM_005633 6654 Hs.709893 NM_005633 HPRD:01681 SOS1 GF1|GGF1|GINGF|HGF|NS4 son of sevenless homolog 1 (Drosophila) protein-coding 0.002674 0.354667 -78(CAAAAGCG,+,0.00) -1(ACTTTCTGTTTC,-,0.00) 561_WT_peak_101 chr1 24018083 24018774 + 389 NA intron (NM_001199802, intron 1 of 5) CpG 159 NM_001199802 6135 Hs.719951 NM_000975 HPRD:10364 RPL11 DBA7|GIG34|L11 ribosomal protein L11 protein-coding 0.056440 0.580925 29(TCGGCCGG,-,0.00) 109(CGTCGCCA,+,0.00) 103(TTTATCCG,-,0.00) 265(AGCGGCTCCGGG,-,0.00) 561_WT_peak_4894 chr22 35795435 35796013 + 389 NA promoter-TSS (NM_006739) promoter-TSS (NM_006739) -392 NM_006739 4174 Hs.517582 NM_006739 HPRD:04075 MCM5 CDC46|P1-CDC46 minichromosome maintenance complex component 5 protein-coding 0.055363 0.518135 369(CCCGGAAGGAGG,-,0.00) 266(GCGCGCCCGCCC,+,0.00) 270(GCCCGCCCCT,+,0.00) 319(CCTTCCCAGC,-,0.00) 561_WT_peak_3246 chr17 48796410 48797327 + 389 NA promoter-TSS (NM_016424) promoter-TSS (NM_016424) -58 NM_016424 51747 Hs.130293 NM_006107 HPRD:16759 LUC7L3 CRA|CREAP-1|CROP|LUC7A|OA48-18|hLuc7A LUC7-like 3 (S. cerevisiae) protein-coding 0.090513 0.638344 270(CCGGCCTCCGCG,+,0.00) -154(AGCCACCT,-,0.00),-62(AGCCGCCT,-,0.00),31(AGCGACTA,-,0.00),116(AGACACTT,-,0.00) 284(CCCCGCCCCCGG,+,0.00) 724(GGGGTCGA,-,0.00) 369(CGTCCGCG,-,0.00) 502(CCGCCCGA,+,0.00) 323(GCCCGGGCCT,+,0.00),554(TGGGCCGGGA,-,0.00) 237(CCCGCGGC,-,0.00) 697(CGGCGCGA,-,0.00) 447(TGGCGACG,-,0.00) 315(CCCTCTCCGCCC,+,0.00),423(GGCCTGAGAGCG,-,0.00) 339(GTCCCACG,-,0.00),733(CGTCTGAC,+,0.00) 192(GAAAACCG,+,0.00) 189(CGGGAAAA,+,0.00) 529(GCCGCGCA,+,0.00) 278(CGCGGGCCCCGC,-,0.00),279(GCGGGCCCCGCC,+,0.00) 255(GGGCGGAGTC,+,0.00) 392(CTTGTCGG,+,0.00) 708(GGCCAGGGCCGC,-,0.00) 359(GCTGGGAAGG,+,0.00) 561_WT_peak_262 chr1 62901518 62902125 + 388 NA promoter-TSS (NM_001017415) promoter-TSS (NM_001017415) -154 NM_001017415 7398 Hs.35086 NM_003368 HPRD:04593 USP1 UBP ubiquitin specific peptidase 1 protein-coding 0.088962 0.618421 36(TGCGGCCGAG,+,0.00) 216(GGCGTCCA,-,0.00) -35(GGGCTCGCGCGG,-,0.00) 272(CGCGTACG,+,0.00),274(CGTACGCA,-,0.00) -8(CCCGCGGC,-,0.00) 423(CGGAAGGAGGGG,+,0.00) 418(GAGAGCGGAAGG,+,0.00) 397(AGCGCGCA,+,0.00),436(ACCGCGCC,+,0.00) 259(AACCCCGCCC,-,0.00) -68(GAGGCCTGCCTG,+,0.00),222(CAGCCGGGCAGC,-,0.00) 561_WT_peak_2605 chr15 91201068 91201363 + 386 NA intron (NR_120372, intron 2 of 3) MER44A|DNA|TcMar-Tigger -2250 NR_120371 101929765 Hs.615348 NR_120371 ENSG00000245479 LOC101929765 - uncharacterized LOC101929765 ncRNA 0.010169 0.385135 28(CAAAACTG,+,0.00) 44(GGGGGCTGCCTG,+,0.00) 561_WT_peak_2368 chr14 102276098 102276789 + 386 NA intron (NM_178586, intron 1 of 12) intron (NM_178586, intron 1 of 12) 303 NM_178587 5527 Hs.368264 NM_002719 HPRD:03385 PPP2R5C B56G|PR61G protein phosphatase 2, regulatory subunit B', gamma protein-coding 0.026049 0.478324 -140(GCTTCCGGCCAA,-,0.00) 309(AGAGGCCT,-,0.00) 477(CGTACGCA,-,0.00) 561_WT_peak_3730 chr19 36235942 36236292 + 385 NA promoter-TSS (NM_172341) promoter-TSS (NM_172341) 226 NM_144987 199746 Hs.351558 NM_144987 HPRD:03050 U2AF1L4 U2AF1-RS3|U2AF1L3|U2AF1L3V1|U2AF1RS3|U2af26 U2 small nuclear RNA auxiliary factor 1-like 4 protein-coding 0.065714 0.615385 39(AGGGCCGGGG,-,0.00) -96(CCGTGCCG,+,0.00),-37(CCGTGCCG,+,0.00) 147(CCTTCTCAGTCC,+,0.00) 96(CCCCGGCCCCGA,-,0.00) -103(CGAGGCTCCGTG,-,0.00) 66(AACACCGCCC,-,0.00) 561_WT_peak_2126 chr14 23025060 23025762 + 384 NA Intergenic Intergenic 32732 NM_001344 1603 Hs.82890 NM_001344 HPRD:02589 DAD1 OST2 defender against cell death 1 protein-coding 0.032764 0.598862 255(GGAGCAGGCTGG,-,0.00) -28(AGGCCTCT,+,0.00),182(AGCCACAT,-,0.00),397(AGCCGCCT,-,0.00) 524(CTGGGAGGGAGG,-,0.00) 97(GGGCTGGGGCGG,-,0.00) 244(ACGTGCCG,+,0.00) 314(AGGCTGGGAGGG,-,0.00) 380(TGCTGGCCCCAC,-,0.00) 392(CGCTGAGCCGCC,+,0.00) 561_WT_peak_2871 chr16 67840258 67840924 + 383 NA promoter-TSS (NM_001288994) promoter-TSS (NM_001288994) -36 NM_020850 57610 Hs.368569 NM_020850 HPRD:15207 RANBP10 - RAN binding protein 10 protein-coding 0.072072 0.652174 53(GGAGGAGCGGGA,-,0.00) -11(GCTCCCGGGTCT,-,0.00),436(GCTGCCGGGTCC,-,0.00) 322(AAGCGGCT,+,0.00),403(AATCGGCT,+,0.00) -47(CCCCCGCC,-,0.00) 51(GGGGAGGAGCGG,+,0.00) 3(CGTCGCTG,+,0.00) 75(CCCGCTCAGCCA,+,0.00),333(GCCTCTCAGCAC,+,0.00) -95(CGCCGGCTCAGC,-,0.00) 67(AGATCCGCCC,-,0.00),321(AAAGCGGCTC,-,0.00) 333(GCCTCTCAGC,-,0.00) 561_WT_peak_6167 chr6 26286590 26286940 + 382 NA Intergenic tRNA-Met-i|tRNA|tRNA -1038 NM_003543 8365 Hs.591790 NM_003543 HPRD:11919 HIST1H4H H4/h|H4FH histone cluster 1, H4h protein-coding 0.034286 0.444444 -147(GATTCCTTTTTC,-,0.00) 561_WT_peak_2119 chr14 21737021 21737661 + 382 NA intron (NM_031314, intron 1 of 8) intron (NM_031314, intron 1 of 8) 297 NM_004500 3183 Hs.508848 NM_004500 HPRD:01243 HNRNPC C1|C2|HNRNP|HNRPC|SNRPC heterogeneous nuclear ribonucleoprotein C (C1/C2) protein-coding 0.057813 0.533541 413(CTCTGCCGCC,-,0.00) 240(GCGCCTTCCCTG,+,0.00) 277(AGGGGAGGGA,-,0.00) 123(CCCCCGGC,-,0.00) -75(CGGCGCTA,+,0.00) 366(CACAACCG,+,0.00) -129(CCTTCCCCTCCC,-,0.00) 358(AACGCGGCCA,-,0.00) 561_WT_peak_2622 chr15 93447001 93447605 + 381 NA promoter-TSS (NR_036136) promoter-TSS (NR_036136) -326 NR_036136 100422995 NR_036136 MIR3175 - microRNA 3175 ncRNA 0.046358 0.484298 174(TGGTGCCG,+,0.00),274(TTGTGCCG,+,0.00),338(CCGTGCCG,+,0.00) 149(CCCTCTCTGCTC,+,0.00) -65(CGGGTAAA,+,0.00),-36(TTTACCAG,-,0.00) 426(CCTTCGGCAGCC,-,0.00) 360(CCGGCGCCGGCG,+,0.00) -43(GGGGCGCTTT,+,0.00),340(GTGCCGAGTT,+,0.00) 561_WT_peak_5037 chr3 23958445 23959027 + 381 NA promoter-TSS (NM_020345) promoter-TSS (NM_020345) 83 NM_001253382 6138 Hs.381219 NM_002948 HPRD:16043 RPL15 DBA12|EC45|L15|RPL10|RPLY10|RPYL10 ribosomal protein L15 protein-coding 0.072165 0.632933 263(GGGCCCGGATCC,+,0.00) 246(CGGCGCGA,-,0.00) 561_WT_peak_1050 chr10 75385709 75386161 + 379 NA Intergenic CpG 15580 NM_021245 58529 Hs.238756 NM_021245 HPRD:05725 MYOZ1 CS-2|FATZ|MYOZ myozenin 1 protein-coding 0.066372 0.547461 2(TGGCGGCT,+,0.00) 38(GGCGTGGA,-,0.00) 111(CGCGTCCG,+,0.00) 115(TCCGTCGG,-,0.00) 114(GTCCGTCG,-,0.00) 219(TTTAGCCG,-,0.00) -95(GGCCATGGCGAG,-,0.00) 561_WT_peak_6401 chr6 91167950 91168252 + 379 NA Intergenic Intergenic 128919 NM_145333 6885 Hs.594838 NM_003188 HPRD:04011 MAP3K7 MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding 0.009934 0.462046 -50(AGAGGCTT,-,0.00) 561_WT_peak_2034 chr13 47167597 47167882 + 378 NA intron (NM_001164211, intron 1 of 19) intron (NM_001164211, intron 1 of 19) 40443 NM_015116 23143 Hs.507971 NM_015116 HPRD:14307 LRCH1 CHDC1|NP81 leucine-rich repeats and calponin homology (CH) domain containing 1 protein-coding 0.031579 0.493007 561_WT_peak_6097 chr6 10694475 10694989 + 377 NA promoter-TSS (NM_017906) promoter-TSS (NM_017906) 107 NR_026737 347744 Hs.61389 NM_001145020 ENSG00000137434 C6orf52 - chromosome 6 open reading frame 52 protein-coding 0.062257 0.574757 214(CCCACCTCCTCC,+,0.00) -22(CCGGGCAGACGG,-,0.00) -38(GGGCTGGGGTTC,-,0.00) 108(TCGTTCCG,+,0.00) 176(CGGCGCTA,+,0.00) 206(AAGTCGGCCC,-,0.00) 37(GCTGCGCCGC,+,0.00),37(GCTGCGCCGC,-,0.00),246(GCTTCGCAGA,-,0.00) 561_WT_peak_1752 chr12 67662500 67663289 + 377 NA promoter-TSS (NM_018448) promoter-TSS (NM_018448) -167 NM_018448 55832 Hs.546407 NM_018448 CAND1 TIP120|TIP120A cullin-associated and neddylation-dissociated 1 protein-coding 0.065906 0.546835 529(AAGTGTCT,+,0.00) 440(CCCCGCCCCCGG,+,0.00) -13(CCGACTGA,+,0.00),343(CCAACCGA,+,0.00) 439(CCCCCGCC,-,0.00) 427(CCGCGTCTGCCG,-,0.00) 251(CGTCGCTT,+,0.00),602(CGTCGTTA,+,0.00) -130(TTTACCCA,-,0.00) 144(GCTTCCTCCTTC,-,0.00) 568(GCCGCCCA,+,0.00) 563(GCCCCGCCGC,-,0.00) 561_WT_peak_2025 chr13 45491810 45492309 + 377 NA Intergenic Intergenic 71554 NM_012345 26747 Hs.525006 NM_012345 HPRD:05073 NUFIP1 NUFIP|bA540M5.1 nuclear fragile X mental retardation protein interacting protein 1 protein-coding 0.064128 0.544000 105(GAACCCGGGCCG,-,0.00) -93(AGGTGGCT,+,0.00) 99(GGAGTCGA,-,0.00),239(GGCGTCAA,-,0.00) 235(CGTAGGCG,-,0.00) 201(TCGGTCGG,-,0.00) 168(TAGCGACT,-,0.00) 11(CAGTTTTG,-,0.00) 262(TGCGCGGA,-,0.00) 197(CTTCTCGG,+,0.00) 113(GCCGCCTGGGTG,+,0.00) 561_WT_peak_6184 chr6 26568955 26569268 + 376 NA Intergenic tRNA-Tyr-TAC|tRNA|tRNA -28060 NM_013375 29777 Hs.254406 NM_013375 HPRD:16469 ABT1 hABT1 activator of basal transcription 1 protein-coding 0.054313 0.445860 41(GAATCCGGCTCG,-,0.00) 28(AGGTCGCT,+,0.00) 46(CGGCTCGA,-,0.00) -118(CAGGTAAA,+,0.00) 561_WT_peak_1723 chr12 56510352 56510796 + 375 NA exon (NM_001035267, exon 1 of 3) exon (NM_001035267, exon 1 of 3) 200 NM_021104 6171 Hs.112553 NM_021104 HPRD:17999 RPL41 L41 ribosomal protein L41 protein-coding 0.045045 0.512360 116(TAGCGAGG,-,0.00) 233(GGGTAGAGAGGG,-,0.00) 121(AGGAGACGAAGG,+,0.00) 561_WT_peak_6144 chr6 26103970 26104654 + 375 NA exon (NM_003542, exon 1 of 1) exon (NM_003542, exon 1 of 1) 136 NM_003542 8364 Hs.46423 NM_003542 HIST1H4C H4/g|H4FG|dJ221C16.1 histone cluster 1, H4c protein-coding 0.055556 0.472993 136(AACCGGCT,+,0.00) 168(GGCGTCAA,-,0.00) -53(AAAAACCG,+,0.00),133(CAAAACCG,+,0.00),278(CAAAACTG,+,0.00) -162(CCTTCCACTCCC,-,0.00) -49(ACCGCGCC,+,0.00),160(GGCGCGGT,-,0.00) -17(CCGCCAAG,-,0.00) 561_WT_peak_6159 chr6 26240458 26241494 + 375 NA TTS (NM_003540) TTS (NM_003540) 322 NM_003540 8361 Hs.247816 NM_003540 HIST1H4F H4|H4/c|H4FC histone cluster 1, H4f protein-coding 0.055985 0.504339 169(CATTTCGGGCCT,-,0.00) 484(AGCCGTTT,-,0.00),682(AGGTGGCT,+,0.00),804(AAGCGGTT,+,0.00) 789(CCCCCTCCCGGG,+,0.00) -76(TCCCGCCCCT,+,0.00) 137(CGTCGCTT,+,0.00) -160(CCCTCACCGCCC,+,0.00) 146(GCCCGACG,-,0.00) 328(CGGCTTTG,-,0.00) 149(CGACGCGG,+,0.00) 561_WT_peak_1818 chr12 98896910 98897740 + 374 NA intron (NR_038383, intron 1 of 3) tRNA-Asp-GAY|tRNA|tRNA 308 NR_038383 643770 Hs.129589 NR_038383 ENSG00000245017 LOC643770 - uncharacterized LOC643770 ncRNA 0.050602 0.507822 508(AGGCCTCT,+,0.00),528(AGCCGCCA,-,0.00) 655(GGCGGGGG,+,0.00) 623(GGGGAGAGAGGG,-,0.00) 632(GGGCGGAGTC,+,0.00) 561_WT_peak_1949 chr13 22177935 22178524 + 374 NA exon (NM_152726, exon 1 of 12) exon (NM_152726, exon 1 of 12) 126 NM_152726 221154 Hs.412103 NM_152726 HPRD:16852 MICU2 1110008L20Rik|EFHA1 mitochondrial calcium uptake 2 protein-coding 0.100170 0.683051 341(GCCTTCGGTTCC,-,0.00),347(GGTTCCGGGGCT,-,0.00) 38(AGGCCGCT,+,0.00) -117(CCGGGAGAGCCG,-,0.00) -71(AGGGGAGGGA,-,0.00),87(GGGGCCGGGA,-,0.00) 342(CCTTCGGTTCCG,-,0.00) -109(GCCGCCCA,+,0.00),61(GCCGCGCC,+,0.00) -124(CACGGCTCCGGG,-,0.00) -112(AGAGCCGCCC,-,0.00),59(GGGCCGCGCC,+,0.00) 205(CTAGGCGG,+,0.00) 226(GCGCCGCCGC,-,0.00) 33(GTGCCAGGCCGC,-,0.00),202(CAGCTAGGCGGC,-,0.00) 561_WT_peak_6461 chr6 126101297 126102626 + 374 NA promoter-TSS (NM_001199619) promoter-TSS (NM_001199619) -346 NM_001199619 135112 Hs.171426 NM_181782 HPRD:14814 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding 0.033860 0.433835 -51(GAACCCGGGCCG,-,0.00) 819(AGACACCT,-,0.00),935(AGAGACTT,-,0.00) 174(CCGGGATGGCCC,-,0.00) 314(CGCGTACT,+,0.00) 507(GAGCGACG,-,0.00) 623(AGGCTGAGAGAG,-,0.00) 944(GCTCCGCTGC,-,0.00) 561_WT_peak_3585 chr19 4723842 4724279 + 373 NA promoter-TSS (NM_139159) promoter-TSS (NM_139159) -205 NM_139159 91039 Hs.515081 NM_139159 HPRD:07001 DPP9 DP9|DPLP9|DPRP-2|DPRP2 dipeptidyl-peptidase 9 protein-coding 0.070938 0.589041 -164(TGACCCGGAAGT,+,0.00),119(TGACCCGGGTTC,+,0.00) -99(CGTCCGCG,-,0.00) 202(TCGCTCGG,-,0.00) -76(CCCGCGGC,-,0.00) 118(TTGACCCG,-,0.00) -71(GGCGCGGC,-,0.00) -74(CGCGGCGCGGCG,+,0.00),-74(CGCGGCGCGGCG,-,0.00) 561_WT_peak_6825 chr7 116502613 116502942 + 373 NA intron (NM_006136, intron 1 of 9) CpG 214 NM_006136 830 Hs.446123 NM_006136 CAPZA2 CAPPA2|CAPZ capping protein (actin filament) muscle Z-line, alpha 2 protein-coding 0.094225 0.706061 -14(GGGCCCGGAGTC,+,0.00) 39(CTCGGCTGCC,-,0.00) -34(CCGGCTCAGCCC,+,0.00) 37(CCCTCGGCTGCC,-,0.00) -152(CGCTGCCGCCGC,-,0.00),-146(CGCCGCCGCCGC,-,0.00),-143(CGCCGCCGCCGC,-,0.00),97(CCGAGGCCCCGC,-,0.00) 98(CGAGGCCCCGCG,-,0.00) 561_WT_peak_6124 chr6 24720325 24721181 + 372 NA Intergenic CpG -1350 NM_030939 81688 Hs.744857 NM_030939 C6orf62 Nbla00237|XTP12|dJ30M3.2 chromosome 6 open reading frame 62 protein-coding 0.087617 0.649942 300(GGCGGAGGGGGA,-,0.00) 415(GATTCCGGCTCT,-,0.00),442(AGACCCGGAGGG,+,0.00) 297(GGCGGCGGAG,+,0.00),539(CTCGGGCGCC,-,0.00) 465(AAGCGGTT,+,0.00) 100(CCTCCATCCCCG,+,0.00),445(CCCGGAGGGGGG,-,0.00) 187(TCGGCGCC,+,0.00) 479(CGTCCGCG,-,0.00) -48(CGGACCGA,+,0.00) 34(GGCGGGGG,+,0.00),507(CCCCCGCC,-,0.00) 18(CGGAAGAGGCGG,+,0.00) 610(CAGCGACG,-,0.00) 152(GCCGCTCAGCCC,+,0.00) -89(CGGGGAAA,+,0.00) 196(TGGGCGGC,-,0.00) -75(CCCTGTCCCCGC,-,0.00),-65(GCGGAGCCCGGG,+,0.00),26(GCGGCGGCGGCG,+,0.00),220(GCGGAGACAGCG,+,0.00) -66(CGCGGAGCCCGG,+,0.00),550(CGCGGGTCCGGG,-,0.00) -35(GGGCGGGGTT,+,0.00) 189(GGCGCCCTGGGC,+,0.00) 528(GCGGCGAAGG,+,0.00) 561_WT_peak_3235 chr17 47270716 47271274 + 372 NA Intergenic GA-rich|Low_complexity|Low_complexity 15748 NM_031498 2793 Hs.181781 NM_031498 HPRD:06792 GNGT2 G-GAMMA-8|G-GAMMA-C|GNG8|GNG9|GNGT8 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 protein-coding 0.030466 0.490161 -98(TCGTGCCT,+,0.00) 234(CCCGCCAGGGCG,+,0.00),236(CGCCAGGGCGTC,-,0.00) 561_WT_peak_84 chr1 17231477 17232139 + 372 NA Intergenic Intergenic -16637 NM_014675 9696 Hs.309403 NM_014675 HPRD:16758 CROCC ROLT ciliary rootlet coiled-coil, rootletin protein-coding 0.025680 0.470588 84(AAGTGGTT,+,0.00) -26(GGGGTGGTGCTC,-,0.00) -61(GGGCTAGGAGGG,-,0.00) 163(CTGTTTTG,-,0.00) 2(CGTGTAAA,+,0.00) -80(GCGTCCTAGCTG,+,0.00) 561_WT_peak_3282-2 chr17 57916015 57916247 + 371 NA intron (NM_030938, intron 11 of 11) intron (NM_030938, intron 11 of 11) -2496 NR_029493 406991 Hs.444569 NR_029493 miRBase:MI0000077 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA 0.004310 0.309013 561_WT_peak_3282 chr17 57915161 57915958 + 371 NA intron (NM_030938, intron 10 of 11) intron (NM_030938, intron 10 of 11) -3068 NR_029493 406991 Hs.444569 NR_029493 miRBase:MI0000077 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA 0.011292 0.412281 43(AAGCGGTT,+,0.00) 409(CAAAAGCG,+,0.00) 561_WT_peak_1137 chr10 104613876 104614502 + 370 NA intron (NM_001136200, intron 1 of 4) CpG 222 NR_037644 100528007 Hs.720370 NR_037644 C10orf32-ASMT C10orf32-AS3MT C10orf32-ASMT readthrough (NMD candidate) ncRNA 0.062300 0.556619 389(GGAGGCCGAG,+,0.00) -79(AGACGCCT,-,0.00) 179(CCGGGGAGTCGC,-,0.00) 41(TCGGTCAG,-,0.00) 342(GGGAAGAAGCGA,+,0.00) 275(CGCGGAGGCGCG,+,0.00) 272(CTTCGCGG,+,0.00),395(CGAGGCGG,+,0.00) 561_WT_peak_7615 chrX 133683795 133684168 + 370 NA promoter-TSS (NR_038998) promoter-TSS (NR_038998) -73 NR_038998 100506757 Hs.130961 NR_038998 LINC00629 - long intergenic non-protein coding RNA 629 ncRNA 0.077748 0.649733 110(AGGTGGCT,+,0.00) 97(CCGGGACGGCGC,-,0.00) -123(TCGACGCC,+,0.00) -133(GTGCAGGCGCTC,-,0.00) 7(GGGCACGA,-,0.00) -43(TAGCGAGG,-,0.00) -91(GGGCCGAGAAGG,-,0.00) -58(CAACACCG,+,0.00) 23(AGCGCGCA,+,0.00) -88(CCGAGAAG,-,0.00),-53(CCGAGACG,-,0.00) -115(GCAGCCTTGGCC,+,0.00) -102(GCTGCGGGGG,+,0.00) 561_WT_peak_2796 chr16 31191457 31192015 + 370 NA intron (NR_028388, intron 1 of 13) CpG 305 NM_001170937 2521 Hs.46894 NM_004960 HPRD:00660 FUS ALS6|ETM4|FUS1|HNRNPP2|POMP75|TLS FUS RNA binding protein protein-coding 0.114695 0.669052 73(GGAGGAGGCTGG,-,0.00) 289(GCATCCGGGCAC,-,0.00) 331(CCCCCTTCGCGG,+,0.00) -148(GGCGTCGG,-,0.00),9(GGCGGCGA,-,0.00) -98(CGCGTGCG,+,0.00),-96(CGTGCGCG,-,0.00),307(CGCGCACG,+,0.00),309(CGCACGCG,-,0.00) -37(CCGGCCGA,+,0.00) 251(TCCCGGCCCC,+,0.00) -146(CGTCGGTA,+,0.00) -133(CGGTGTTG,-,0.00) -94(TGCGCGGA,-,0.00) 251(TCCCGGCCCCGC,-,0.00) 48(CGGGAAGCCGCG,+,0.00),252(CCCGGCCCCGCG,-,0.00) 335(CTTCGCGG,+,0.00),359(CCGCCTCG,-,0.00) -91(GCGGACATGGCC,+,0.00),-56(GGCGACGGCGGC,-,0.00) -49(GCGGCGGCGC,+,0.00),-28(GCCTCCCAGC,-,0.00) 561_WT_peak_6135 chr6 26020608 26021589 + 370 NA promoter-TSS (NM_003538) promoter-TSS (NM_003538) 380 NM_003529 8350 Hs.546315 NM_003529 HPRD:04155 HIST1H3A H3/A|H3FA histone cluster 1, H3a protein-coding 0.068298 0.530550 324(CTCGCCCGCC,-,0.00) -160(TAGCGTCT,+,0.00) 283(TCCACGCC,+,0.00) 513(TCGGCCGG,-,0.00) 651(GCCGGGCG,+,0.00) 296(CGTCACTA,+,0.00),625(CGTCTCTA,+,0.00) 26(CAAAAGCG,+,0.00),498(CAAAACCA,+,0.00) 790(CGGTTAAA,+,0.00) 83(CGTGGCTCTGCG,-,0.00) 15(AAGGCAGCCCGC,-,0.00) 561_WT_peak_2853 chr16 57333837 57334638 + 368 NA Intergenic Intergenic -15653 NM_015993 51090 Hs.632215 NM_015993 HPRD:11854 PLLP PMLP|TM4SF11 plasmolipin protein-coding 0.052434 0.490025 117(GGAGGAGGTTGA,-,0.00) 496(AAGCCTCT,+,0.00) -21(TCGACGAC,+,0.00),607(GGCGTGGA,-,0.00) 563(CGCCCGGC,-,0.00) 361(CGGTGTTG,-,0.00) 561_WT_peak_1108 chr10 97849633 97850130 + 367 NA non-coding (NR_038444, exon 1 of 6) non-coding (NR_038444, exon 1 of 6) 111 NR_038444 728558 Hs.538374 NR_038444 ENSG00000226688 ENTPD1-AS1 - ENTPD1 antisense RNA 1 ncRNA 0.068410 0.592369 125(CATTACGGGCCC,-,0.00) 30(CTCTGCCGCC,-,0.00) 65(AGAGGCCT,-,0.00),252(AAGTGGTT,+,0.00),265(AAGCGGCT,+,0.00) -138(CCGAGCTCCCGG,+,0.00) 225(CGCGTTCG,+,0.00) 295(GGCGGGGG,+,0.00) 76(TGAAGCCGAAGG,+,0.00) 291(GCGGGGCGGGGG,+,0.00) 561_WT_peak_3016 chr17 7387488 7388026 + 365 NA promoter-TSS (NM_000937) promoter-TSS (NM_000937) 59 NM_000937 5430 Hs.270017 NM_000937 HPRD:08916 POLR2A POLR2|POLRA|RPB1|RPBh1|RPO2|RPOL2|RpIILS|hRPB220|hsRPB1 polymerase (RNA) II (DNA directed) polypeptide A, 220kDa protein-coding 0.074349 0.578850 292(TTCCCCTCCTCC,+,0.00) 75(AGGCGGCT,+,0.00) 44(CCGAGAGCGCGG,-,0.00),83(CCCGGAAGGGGG,-,0.00),328(GGTCCTTCCCGG,+,0.00) -98(TTTACCCA,-,0.00),265(TTTCCCCG,-,0.00) 366(CTAGGCGG,+,0.00) 561_WT_peak_3687 chr19 19431305 19431897 + 365 NA promoter-TSS (NM_015329) promoter-TSS (NM_015329) -29 NM_015329 23383 Hs.654939 NM_015329 HPRD:11117 MAU2 KIAA0892|MAU2L|SCC4|mau-2 MAU2 sister chromatid cohesion factor protein-coding 0.091216 0.627319 235(GGCGGCCCAG,+,0.00),259(GGCGGCCGAC,+,0.00) 201(TGGCGGCT,+,0.00) 29(GGCGTCGC,-,0.00),387(TCGAGGCC,+,0.00) -86(TCGGTCAG,-,0.00) 99(TGGGCGGC,-,0.00),245(GCTGCGCA,+,0.00) 212(GCGGCGGCAGCG,+,0.00) 131(AGCCCGGCCC,-,0.00) -91(CCGCCTCG,-,0.00),256(CGAGGCGG,+,0.00),264(CCGACTCG,-,0.00) 223(GGCCCAGGCGGC,-,0.00),253(GGCCGAGGCGGC,-,0.00) 561_WT_peak_5108 chr3 50126215 50126996 + 364 NA intron (NR_036627, intron 1 of 23) CpG 264 NR_036627 10181 Hs.439480 NM_005778 HPRD:06052 RBM5 G15|LUCA15|RMB5 RNA binding motif protein 5 protein-coding 0.071703 0.638107 -64(GGAGGCGGGTGA,-,0.00) 577(CTCGGCCGCG,-,0.00) -94(AGGCCGCT,+,0.00),182(AGCCGGTT,-,0.00) 570(CCGCCATCTCGG,+,0.00) 129(GGGCTGGCCCCC,-,0.00),175(CAGCTCCAGCCG,+,0.00) 549(TCGGTCGA,-,0.00) 104(TAACGACG,-,0.00) 49(CAGAACCG,+,0.00),185(CGGTTCTG,-,0.00),485(CGGGTTTG,-,0.00) 225(GCCGCGCC,+,0.00) 223(GGGCCGCGCC,+,0.00) 416(GCCGCCATCCCC,+,0.00) -99(CAGCCAGGCCGC,-,0.00) 561_WT_peak_7330 chr9 91925237 91925824 + 363 NA promoter-TSS (NM_001827) promoter-TSS (NM_001827) -583 NM_001827 1164 Hs.83758 NM_001827 HPRD:00300 CKS2 CKSHS2 CDC28 protein kinase regulatory subunit 2 protein-coding 0.088586 0.659864 170(CCGCCCTCCCCC,+,0.00) -33(GGCTCCGGGCCT,-,0.00) -82(CTCGGCCTCC,-,0.00),129(CGCGGCCGCC,-,0.00) 170(CCGCCCTCCCCC,+,0.00) 81(GGCGGCGA,-,0.00),332(GGCCTCGA,-,0.00) 149(CCGACCCA,+,0.00),336(TCGACCGA,+,0.00) 135(CGCCCGGC,-,0.00) -41(ACCGCGCC,+,0.00),97(GCTGCGCA,+,0.00) -37(CGCCGGCTCCGG,-,0.00) -12(CGTGGCTCCGCA,-,0.00) 166(GAAGCCGCCC,-,0.00) 43(CCGCGACG,-,0.00) -8(GCTCCGCAGG,-,0.00) 50(GGGCCAGGCCGG,-,0.00),120(CAGCCACGCCGC,-,0.00) 561_WT_peak_3145 chr17 36907920 36908230 + 363 NA promoter-TSS (NM_002795) promoter-TSS (NM_002795) -891 NR_104194 5691 Hs.82793 NM_002795 HPRD:03709 PSMB3 HC10-II proteasome (prosome, macropain) subunit, beta type, 3 protein-coding 0.074194 0.508039 -7(CGAACGCG,-,0.00) 23(CCGAGTCG,-,0.00) 98(GCCGCCATCGGG,+,0.00) 561_WT_peak_6638 chr7 35839976 35840774 + 362 NA promoter-TSS (NM_001788) promoter-TSS (NM_001788) -140 NR_120511 101928545 Hs.648103 NR_120511 SEPT7-AS1 - SEPT7 antisense RNA 1 (head to head) ncRNA 0.076441 0.595745 478(AGGCCCGGAAGC,+,0.00) 425(GGCGGCGGAG,+,0.00) -50(AGACACCT,-,0.00),-36(AAGTGTCT,+,0.00),307(AGAGGCCT,-,0.00),360(TGGCGGCT,+,0.00) 435(CTGGGGAGGCGG,-,0.00) 525(GGAGTCGA,-,0.00) 614(CGTAGGCG,-,0.00) 31(CCCCCGCC,-,0.00),502(GGCGGGGG,+,0.00),588(GCCGGGCG,+,0.00) -82(TAGCCACG,-,0.00) 207(CCCTCGCACCCC,+,0.00) -13(CAAAGCCG,+,0.00) -127(CGGGGAAA,+,0.00),363(CGGCTAAA,+,0.00) 69(GCCGCGCC,+,0.00),157(TGCGCGGG,-,0.00) 422(CGAGGCGG,+,0.00) 426(GCGGCGGAGC,+,0.00) 561_WT_peak_6158 chr6 26233879 26235301 + 362 NA exon (NM_005320, exon 1 of 1) exon (NM_005320, exon 1 of 1) 626 NM_005320 3007 Hs.136857 NM_005320 HPRD:06764 HIST1H1D H1.3|H1D|H1F3|H1s-2 histone cluster 1, H1d protein-coding 0.042194 0.531975 -29(TGGGCCGGAAGC,+,0.00),771(TTCCCCGGAAGC,+,0.00) 513(CTTGGCCGCC,-,0.00) 414(AGCCGTTT,-,0.00),690(AGCCACCT,-,0.00),779(AAGCCGCT,+,0.00),780(AGCCGCTT,-,0.00) 683(CGGCGCCAGCCA,+,0.00),740(CTGCGCCAGCCT,+,0.00) 137(TCGGCCGG,-,0.00) 292(CAGCACGA,-,0.00) 680(TAGCGGCG,-,0.00) 341(CCCTCTCCACCC,+,0.00) 321(CAACACCG,+,0.00) 491(CCTTCGGCTTCC,-,0.00) 1240(TGCGCGGC,-,0.00) 682(GCGGCGCCAGCC,+,0.00),932(GCGCGGCCAGAG,+,0.00) -132(GGGCCGATAT,+,0.00),104(GGGCCACTTT,+,0.00),134(AAATCGGCCG,-,0.00) 517(GCCGCCTTGGGC,+,0.00) 512(GCTTGGCCGC,-,0.00) 251(GCGCCCAGGCTG,+,0.00) 561_WT_peak_3931 chr19 58816522 58817051 + 360 NA Intergenic CpG -21599 NM_181846 342945 Hs.388162 NM_181846 HPRD:01315 ZSCAN22 HKR2|ZNF50 zinc finger and SCAN domain containing 22 protein-coding 0.088847 0.669811 -163(CCTTCCGGTGCG,-,0.00),-101(CCTTCCGGCCCC,-,0.00),245(GACCCCGGGTCG,-,0.00) 89(TCGGGCGG,-,0.00) 303(TCCTGCCG,+,0.00) 261(GGGCAGAGAGGC,-,0.00) -142(CAGAACCG,+,0.00) -27(GGAAGGCGAAGG,+,0.00) 6(TGGGCGGC,-,0.00) -99(TTCCGGCCCCGC,-,0.00) 240(AACGCGACCC,-,0.00) -94(GCCCCGCAGC,-,0.00) 561_WT_peak_96 chr1 22109555 22110305 + 359 NA promoter-TSS (NM_001032730) promoter-TSS (NM_001032730) -242 NM_032236 84196 Hs.467524 NM_032236 HPRD:15637 USP48 RAP1GA1|USP31 ubiquitin specific peptidase 48 protein-coding 0.092000 0.629827 -68(GCCGTCGA,-,0.00),-64(TCGACACC,+,0.00) -113(CCGCGCCCGCCC,+,0.00) -40(CGCGGACG,+,0.00),62(AGCGTACG,+,0.00) 531(GGCGGGGG,+,0.00) -92(CCGCACGA,-,0.00) 116(GCGTCTCAGCCC,+,0.00) 69(GTCCGAGG,-,0.00),538(GTCCGAGG,-,0.00) 77(CGGTCTTG,-,0.00) 409(TTTTCCCG,-,0.00) -114(GCCGCGCC,+,0.00) 72(CGAGGCGG,+,0.00),297(CCGAGTCG,-,0.00) 561_WT_peak_6623 chr7 25901770 25902061 + 359 NA Intergenic Intergenic -21285 NR_046486 100873753 NR_046486 RNU6-16P RNU6-16 RNA, U6 small nuclear 16, pseudogene snRNA 0.044674 0.486301 -125(AAGCGTTT,+,0.00),-74(AACCGCTT,-,0.00) -72(CCGCTTCTTTCT,-,0.00) 13(GGGGCGAGAGGG,-,0.00) 561_WT_peak_87 chr1 19577891 19578590 + 359 NA promoter-TSS (NM_015047) promoter-TSS (NM_015047) 165 NM_016183 51154 Hs.463797 NM_016183 HPRD:12725 MRTO4 C1orf33|MRT4|dJ657E11.4 mRNA turnover 4 homolog (S. cerevisiae) protein-coding 0.104435 0.681429 3(TCCGCCTCCGCG,+,0.00) -63(CTCAGCCGCC,-,0.00) -60(AGCCGCCA,-,0.00),476(AGGTGGCT,+,0.00) -28(CCGCCGTCCCGG,+,0.00),4(CCGCCTCCGCGG,+,0.00) 182(GAGGGGCAGCCC,+,0.00) -157(CACGTACG,+,0.00),-155(CGTACGCA,-,0.00) 47(TCGGTCGG,-,0.00),51(TCGGACGG,-,0.00),489(CCGGTCGG,-,0.00) -6(GCCGCGGG,+,0.00),380(GGCGGGGG,+,0.00) 243(CACCGTCTTCCG,-,0.00) -67(CCCACTCAGCCG,+,0.00) 49(GGTCGGAC,+,0.00),50(GTCGGACG,-,0.00) 464(TAAAACCG,+,0.00) -78(GAAACGAGAAGC,+,0.00) -11(ACCGCGCC,+,0.00) -4(CGCGGGCTCCGC,-,0.00) -59(GCCGCCATGATG,+,0.00) 428(GCCTCGCTGC,-,0.00) 130(GCGGCTTGGCAG,+,0.00),425(GCTGCCTCGCTG,+,0.00) 561_WT_peak_2305 chr14 77563890 77564504 + 358 NA promoter-TSS (NM_033426) promoter-TSS (NM_033426) -381 NM_033426 85457 Hs.709066 NM_033426 HPRD:13890 CIPC KIAA1737 CLOCK-interacting pacemaker protein-coding 0.100977 0.648780 256(AAGCCGCT,+,0.00),347(AGGCCTCT,+,0.00) -23(GGCGTAGA,-,0.00),198(TCGACTCC,+,0.00),290(GGCGGCGA,-,0.00) 218(CCCCCGGC,-,0.00),391(GGCGGGGG,+,0.00) 88(CGGCACGC,-,0.00),139(CGGCACGG,-,0.00),147(CGGCACGG,-,0.00),155(CGGCACGC,-,0.00) 316(TAGAGACG,-,0.00) 399(CGGGGAAA,+,0.00) 326(CGCCGGCCGCGG,-,0.00),358(CGCTGGCCCCGC,-,0.00),392(GCGGGGGCGGGG,+,0.00) 139(CGGCACGGCGGC,-,0.00),147(CGGCACGGCGGC,-,0.00) 291(GCGGCGAGGC,+,0.00) 561_WT_peak_3018 chr17 7486858 7487714 + 358 NA intron (NM_004870, intron 1 of 6) CpG 321 NM_004870 9526 Hs.246381 NM_004870 HPRD:04951 MPDU1 CDGIF|HBEBP2BPA|Lec35|My008|PP3958|PQLC5|SL15 mannose-P-dolichol utilization defect 1 protein-coding 0.066589 0.535589 161(GGCGGCCGAG,+,0.00) 186(AAACGGCT,+,0.00),400(AAGTGTCT,+,0.00) 97(CGCGCACG,+,0.00),99(CGCACGCG,-,0.00) 61(GCCGCGGG,+,0.00) 196(TCGTGCCG,+,0.00) 491(TAGCGACA,-,0.00) 65(CGGGAAAA,+,0.00),209(TTTACCTG,-,0.00) -117(CAAACTGGAAGC,+,0.00) -81(ACCGCGCA,+,0.00),95(AGCGCGCA,+,0.00) 167(CGAGGCGG,+,0.00) 356(GCCGCCATGCCG,+,0.00) 56(GCTTCGCCGC,-,0.00) 561_WT_peak_3830 chr19 48866377 48866668 + 356 NA intron (NM_018273, intron 2 of 7) CpG 664 NM_018273 55260 Hs.351335 NM_018273 HPRD:08556 TMEM143 - transmembrane protein 143 protein-coding 0.054983 0.643836 -37(GGGAGCCGTAGT,+,0.00) -128(GAAACACGAAGG,+,0.00) -59(CCCTGCCGCCGC,-,0.00) -51(CCGCGAAG,-,0.00) -91(GGCGCCAGGGCA,+,0.00) -52(GCCGCGAAGC,+,0.00) 561_WT_peak_7270 chr9 46687312 46687852 + 356 NA promoter-TSS (NR_003674) promoter-TSS (NR_003674) 25 NR_047527 387628 Hs.439341 NM_174950 HPRD:13402 KGFLP1 - fibroblast growth factor 7 pseudogene pseudo 0.061111 0.591497 10(AAGCCGCT,+,0.00) 280(CGGGGAAGGCGC,-,0.00) -23(TCGGCGCC,+,0.00) 326(CGCACGCG,-,0.00) -55(CGCCCGGC,-,0.00) 260(CGGGTACA,+,0.00),318(TTTACCTG,-,0.00) 345(TCCGCGCA,+,0.00) -50(GGCCAGGGCTGC,-,0.00) 331(GCGTCGCAGC,-,0.00) 561_WT_peak_3623 chr19 10947082 10947534 + 355 NA promoter-TSS (NM_006858) promoter-TSS (NM_006858) -325 NM_006858 11018 Hs.211463 NM_006858 TMED1 IL1RL1LG|Il1rl1l|Tp24 transmembrane emp24 protein transport domain containing 1 protein-coding 0.070796 0.551876 -147(CTCGGCCGCT,-,0.00) 40(TAGCGTCT,+,0.00) 117(GGCGTCGT,-,0.00),156(TCGACGCC,+,0.00) 90(GGGCTGGGGCGG,-,0.00) 59(TGTACGCG,-,0.00) 12(GACCGACG,-,0.00),154(GTTCGACG,-,0.00) -161(GCTTCGGCTCTC,-,0.00) -150(CTTCTCGG,+,0.00) 561_WT_peak_6245 chr6 28908737 28909061 + 355 NA Intergenic tRNA-Leu-TTG|tRNA|tRNA -2662 NR_103538 729583 Hs.453549 NR_103538 C6orf100 dJ25J6.5 chromosome 6 open reading frame 100 ncRNA 0.037037 0.424615 -156(CGCGAACG,+,0.00) 561_WT_peak_6755 chr7 92861471 92861780 + 355 NA promoter-TSS (NM_024553) promoter-TSS (NM_024553) -28 NM_001257998 55610 Hs.202424 NM_017667 ENSG00000004766 CCDC132 - coiled-coil domain containing 132 protein-coding 0.045307 0.551613 86(TAGTGGCT,+,0.00) -25(GGCGTCCA,-,0.00) 27(TGGGTCGG,-,0.00) -38(CGTTGCTA,+,0.00) -114(TTTACCGG,-,0.00) 561_WT_peak_1585 chr12 9894395 9894751 + 354 NA Intergenic Intergenic -8678 NM_001253750 160365 Hs.560087 NM_172004 HPRD:16247 CLECL1 DCAL-1|DCAL1 C-type lectin-like 1 protein-coding 0.011236 0.364146 72(AGGTTTTG,-,0.00) 50(TGGGCGGT,-,0.00) 561_WT_peak_7347 chr9 94877368 94877773 + 353 NA intron (NM_178324, intron 1 of 5) CpG 186 NM_178324 10558 Hs.90458 NM_006415 HPRD:05754 SPTLC1 HSAN1|HSN1|LBC1|LCB1|SPT1|SPTI serine palmitoyltransferase, long chain base subunit 1 protein-coding 0.098765 0.662562 213(GGCGGCGGAG,+,0.00) 124(TAGCCGCT,+,0.00),125(AGCCGCTT,-,0.00) 11(CACCCTCCCCGG,+,0.00) -135(CAGCCCCCGCCC,+,0.00) 206(AGGGCGGGGC,-,0.00) -132(CCCCCGCC,-,0.00),-126(CCCCCGCC,-,0.00) 173(CGTCGCTG,+,0.00) -131(CCCCGCCCCCGC,-,0.00) 106(CGTGGCGG,+,0.00) 172(GCGTCGCTGC,-,0.00),214(GCGGCGGAGC,+,0.00) 561_WT_peak_4893 chr22 35653338 35653912 + 353 NA intron (NM_001003681, intron 1 of 10) CpG 180 NM_001003681 10042 Hs.588815 NM_005487 HPRD:05267 HMGXB4 HMG2L1|HMGBCG|THC211630 HMG box domain containing 4 protein-coding 0.114983 0.740870 254(GGAGGAGGGCGG,-,0.00) 282(CGGGGAAGGCGG,-,0.00),307(CCGGGAGGGGGC,-,0.00),359(CCCCCTGCCCGG,+,0.00) 1(GGCGGCGA,-,0.00),14(GGCGTTGA,-,0.00) 236(GGGCTGGAGCGG,-,0.00) 303(GGGGCCGGGA,-,0.00) 50(TAGCGGCG,-,0.00),117(CGTCGCCA,+,0.00) 304(GGGCCGGGAGGG,-,0.00),372(CCGTCTCCGCCC,+,0.00) 132(CCCTGGGCCCGC,-,0.00),301(GCGGGGCCGGGA,+,0.00) 107(AGCCCCGCCC,-,0.00),189(GGGCCGAGCC,+,0.00) 171(CTTCGCGG,+,0.00) 128(GCCGCCCTGGGC,+,0.00) 298(GCTGCGGGGC,+,0.00) 343(GACCCGGGCCGC,-,0.00) 561_WT_peak_254 chr1 59165386 59165799 + 353 NA intron (NM_001085487, intron 1 of 19) intron (NM_001085487, intron 1 of 19) 155 NM_001085487 114803 Hs.744921 NM_001085487 ENSG00000162601 MYSM1 2A-DUB|2ADUB Myb-like, SWIRM and MPN domains 1 protein-coding 0.072639 0.652174 -48(GGCGGGCGAG,+,0.00) 166(AGCCGCCA,-,0.00) 117(CCCCCGCC,-,0.00) 124(CGCCGCTA,+,0.00) 68(CCCTCTCCGCCC,+,0.00) -15(CCCTGGCCCAGG,-,0.00),41(CCCAGGGCCCGC,-,0.00),229(CCGGGGGCAGGG,+,0.00) -111(AAAGCGACCC,-,0.00) 167(GCCGCCATGATG,+,0.00) 561_WT_peak_1019 chr10 69523705 69524497 + 353 NA Intergenic CpG -68152 NM_013266 29119 Hs.21375 NM_013266 HPRD:09639 CTNNA3 ARVD13|VR22 catenin (cadherin-associated protein), alpha 3 protein-coding 0.074495 0.544767 9(AGACGCTT,-,0.00),362(AAGTGTCT,+,0.00) -125(CCGAGGGGGCGG,-,0.00) -26(GCGACGCC,+,0.00) 574(CGCCTACG,+,0.00) -114(GGCGGGGG,+,0.00) 297(GAGCTCAGAGGG,-,0.00) 416(CGTTGGAC,+,0.00) 309(TGCGCGCT,-,0.00),444(CCCGCGCA,+,0.00) -12(CTTGGCGG,+,0.00) 392(GCAGCGATGGCC,+,0.00) 50(GGCTCGCAGC,-,0.00),274(GCCCCGCCGC,-,0.00) 272(CAGCCCCGCCGC,-,0.00) 561_WT_peak_12 chr1 1310417 1311204 + 352 NA promoter-TSS (NM_001127230) promoter-TSS (NM_001127230) 8 NM_017900 54998 Hs.632515 NM_017900 HPRD:16457 AURKAIP1 AIP|AKIP|MRP-S38 aurora kinase A interacting protein 1 protein-coding 0.096569 0.642132 -115(GACCCCGGGCCC,-,0.00),-4(ACTTCCGGTCCG,-,0.00),129(GTTTCCGGTTAG,-,0.00),282(GGGGCCGGATTC,+,0.00),416(GGACCCGGAATA,+,0.00),442(GGTACCGGGCCT,-,0.00) 541(GGAGGCCGAG,+,0.00) 375(AAGCGTCT,+,0.00) -46(TCGACGCG,+,0.00) 302(CCGACGGA,+,0.00) -92(CGCCCGGC,-,0.00) 610(CGTCTCTA,+,0.00) 300(GGCCGACG,-,0.00) 397(CGTTTTTG,-,0.00) 245(TATACCCG,-,0.00) 505(GGCGCGGT,-,0.00) -113(CCCCGGGCCCGC,-,0.00),99(CTCAGGCCCCGC,-,0.00) 13(AAGTCGGCCC,-,0.00) -45(CGACGCGG,+,0.00) 561_WT_peak_3453 chr18 19180769 19181090 + 352 NA promoter-TSS (NM_052911) promoter-TSS (NM_052911) -236 NM_052911 114799 Hs.464733 NM_052911 HPRD:16868 ESCO1 A930014I12Rik|CTF|ECO1|EFO1|ESO1 establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding 0.105919 0.658385 -138(AACCGGCT,+,0.00) -49(GGCGTCGA,-,0.00) 60(TAGCGGCG,-,0.00) 124(CGGTTGTG,-,0.00) -9(GGCGCGGT,-,0.00) 14(CGCGCCTCCGCG,-,0.00) -101(CCGCCACG,-,0.00) 109(CACCCAGGCCCC,-,0.00) 561_WT_peak_6847 chr7 131012572 131013019 + 351 NA promoter-TSS (NR_125364) promoter-TSS (NR_125364) 200 NM_013255 4289 Hs.44693 NM_013255 HPRD:16129 MKLN1 TWA2 muskelin 1, intracellular mediator containing kelch motifs protein-coding 0.093960 0.696429 249(GGATCCGGGGCG,-,0.00),269(AGAACCGGAAGC,+,0.00) -51(GGCGCCCGAG,+,0.00),95(GGCAGCCGAG,+,0.00) -76(TGGCGGCT,+,0.00) -28(CCTACGCG,-,0.00) -110(GCGGTCGG,-,0.00),187(TCGCTCGG,-,0.00) 41(TCGTGCTG,+,0.00) -132(CCCCTCCTCCCG,-,0.00),-38(CGGCTTCTCCCC,-,0.00),224(AGGGAGAAGGGG,+,0.00) -53(GCGGCGCCCGAG,+,0.00),118(GCGGGGCCTGCT,+,0.00) -56(GCTGCGGCGC,+,0.00) 561_WT_peak_6556 chr6 170151287 170152304 + 351 NA promoter-TSS (NM_018341) promoter-TSS (NM_018341) 77 NM_001278532 55780 Hs.47546 NM_018341 HPRD:18697 ERMARD C6orf70|PVNH6|dJ266L20.3 ER membrane-associated RNA degradation protein-coding 0.100295 0.676817 497(AGACGCCT,-,0.00),675(TAGTCGCT,+,0.00) 172(CCGCGAGGGCGG,-,0.00) 355(TCGGCGCC,+,0.00) 201(CTCGTACG,+,0.00) -63(ACGGTCGG,-,0.00) 724(GCCGGGCG,+,0.00) 444(TGGCGACG,-,0.00) -61(GGTCGGAC,+,0.00),574(CGGCGGAC,+,0.00) 597(TGCGCGGT,-,0.00) 506(GCGGGCCCTGCC,+,0.00) 376(CTCGGCTACGCG,-,0.00),599(CGCGGTGGCGCG,+,0.00) -48(CGTCTCGG,+,0.00),381(CTACGCGG,+,0.00),450(CGTCGCGG,+,0.00) 219(CCCGCCAGGGCT,+,0.00),454(GCGGCCCTGGCC,+,0.00),509(GGCCCTGCCGGC,-,0.00) 278(GCGCCGCAGC,-,0.00),283(GCAGCGGGGC,+,0.00) 561_WT_peak_6040 chr5 178487090 178487509 + 351 NA promoter-TSS (NM_014594) promoter-TSS (NM_014594) -308 NM_014594 30832 Hs.272328 NM_014594 HPRD:15785 ZNF354C KID3 zinc finger protein 354C protein-coding 0.093079 0.645238 94(GGGGCCGGAGGC,+,0.00),241(TCTTCCGGGCCG,-,0.00) -131(CGGTTTTG,-,0.00) -92(TGCGCGGG,-,0.00),-8(TCCGCGCA,+,0.00),54(AGCGCGCA,+,0.00) 561_WT_peak_2498 chr15 57998847 57999356 + 351 NA exon (NM_015532, exon 1 of 4) exon (NM_015532, exon 1 of 4) 382 NM_001018102 81488 Hs.437256 NM_015532 HPRD:07575 POLR2M GCOM1|GRINL1A|Gdown|Gdown1 polymerase (RNA) II (DNA directed) polypeptide M protein-coding 0.100196 0.649020 -68(TGCCCCGGAGTC,+,0.00) 124(AGAGACTT,-,0.00) 48(GGCTTCGA,-,0.00) 5(CCGCGCCAGCCT,+,0.00) -51(CGTCCGCG,-,0.00) 43(CCCGCGGC,-,0.00) -117(CGGCTCGA,-,0.00),-71(TCGTGCCC,+,0.00) -102(CCCGTTCTTCCG,-,0.00) -39(CGGCGCTA,+,0.00) 269(GTCCTACG,-,0.00) -92(CGGGAAAA,+,0.00) 4(GCCGCGCC,+,0.00),20(CCCGCGCA,+,0.00) -28(GCGGGGCCTGCC,+,0.00) 37(CGCTGCCCCGCG,-,0.00),45(CGCGGCTTCGAG,-,0.00) 41(GCCCCGCGGC,-,0.00) 561_WT_peak_2048 chr13 49549501 49550610 + 350 NA promoter-TSS (NM_001278438) promoter-TSS (NM_001278438) 7 NM_001079673 22862 Hs.508010 NM_014923 HPRD:13548 FNDC3A FNDC3|HUGO|bA203I16.1|bA203I16.5 fibronectin type III domain containing 3A protein-coding 0.100090 0.669369 372(TCGGGCTCCTCC,+,0.00) 159(GCAGCCGGGCCT,-,0.00) 228(CTCAGCCGCC,-,0.00),530(GGCGGCCGCG,+,0.00) -57(AGAGGCTT,-,0.00),231(AGCCGCCA,-,0.00),614(AGCCGCCT,-,0.00) 915(GCGGGGGCGCGG,-,0.00) 330(TCCGTCGG,-,0.00) 753(AGGGCCGGGG,-,0.00) 301(GGCGGGGG,+,0.00),321(GCCGCGGG,+,0.00),678(GGCGGGGG,+,0.00),926(GCCGGGGG,+,0.00) 17(GGGCCGACAGGG,-,0.00),477(GGGCTGAGGCGG,-,0.00) 430(CGGGTGAA,+,0.00) 210(GGGAGCCAAACG,+,0.00) 435(GAAACAGAAAGC,+,0.00) 285(GGCGCGGC,-,0.00),343(CCCGCGCA,+,0.00),920(GGCGCGGC,-,0.00) 244(CGGTGGCCCCGC,-,0.00),336(GGCGGGGCCCGC,-,0.00),337(GCGGGGCCCGCG,+,0.00),406(GCGGCGGCGGCG,+,0.00),845(GTGGGGCCGGGG,+,0.00),921(GCGCGGCCGGGG,+,0.00) 345(CGCGCAGCCGCA,+,0.00) 218(AACGCGGCCG,-,0.00),773(GGCTCGGCCC,-,0.00),889(GGGCCGAGCC,+,0.00) 233(CCGCCACG,-,0.00),298(CGAGGCGG,+,0.00),452(CTACGCGG,+,0.00),871(CTAGTCGG,+,0.00) 399(AAGCATGGCGGC,-,0.00),533(GGCCGCGGCGGC,-,0.00) 160(CAGCCGGGCCTC,-,0.00) 561_WT_peak_2436 chr15 40885887 40886546 + 350 NA promoter-TSS (NM_144508) promoter-TSS (NM_144508) -231 NM_170589 57082 Hs.181855 NM_144508 HPRD:10634 CASC5 AF15Q14|CT29|D40|KNL1|PPP1R55|Spc7|hKNL-1|hSpc105 cancer susceptibility candidate 5 protein-coding 0.053111 0.483333 39(CTCGGCCACC,-,0.00) 122(AGCCGCCA,-,0.00),362(AGCCGCTT,-,0.00),447(AGGCGGCT,+,0.00) 372(CGCGTGCG,+,0.00) 238(TCGGTCGA,-,0.00) 421(GCCGGGCG,+,0.00) 49(TCGTCCCG,+,0.00) 452(GCTGTCTGTTTC,-,0.00) 343(GGGCGGAGCC,+,0.00),361(GAGCCGCTTT,+,0.00) 386(CTAGGCGG,+,0.00) 561_WT_peak_2966 chr17 1303160 1303525 + 348 NA exon (NM_006761, exon 1 of 6) exon (NM_006761, exon 1 of 6) 214 NR_024058 7531 Hs.513851 NM_006761 HPRD:05457 YWHAE 14-3-3E|HEL2|KCIP-1|MDCR|MDS tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon protein-coding 0.090411 0.658470 28(TCAGCCTGCTCG,+,0.00) -33(GGCGGCAGAG,+,0.00) 119(AAGCGGAT,+,0.00) 157(CGCGTCCG,+,0.00) 138(CTCTCTCAGCCT,+,0.00) -38(TGGGCGGC,-,0.00) 148(CTCTCGCTCCGC,-,0.00) 561_WT_peak_2596 chr15 89721000 89721225 + 347 NA intron (NM_007011, intron 10 of 14) intron (NM_007011, intron 10 of 14) 43810 NM_000326 6017 Hs.1933 NM_000326 HPRD:01572 RLBP1 CRALBP retinaldehyde binding protein 1 protein-coding 0.022222 0.469027 561_WT_peak_5137 chr3 58291904 58292226 + 347 NA promoter-TSS (NR_049758) promoter-TSS (NR_049758) 93 NR_049757 11102 Hs.446320 NM_007042 HPRD:18001 RPP14 P14 ribonuclease P/MRP 14kDa subunit protein-coding 0.108696 0.665635 -117(ACGACGCC,+,0.00) -66(CGGGACGA,-,0.00) -159(CGCTCTCAGCTC,+,0.00) 61(GTCCGACG,-,0.00) 146(TGCGCGGG,-,0.00) 13(CTTGGCGG,+,0.00) 10(AGCCTTGGCGGG,-,0.00) 561_WT_peak_1921 chr12 125424079 125424929 + 347 NA Intergenic Intergenic 24411 NR_049820 100847004 NR_049820 miRBase:MI0018167 MIR5188 - microRNA 5188 ncRNA 0.047059 0.540541 90(CTTTCCGGGCCA,-,0.00) -55(CCGGCCTCCCCG,+,0.00) 534(GGGGCCGGGA,-,0.00) 147(CGGGTAGA,+,0.00),358(CGGGCAAA,+,0.00) 39(CCTGCAGCTCCC,-,0.00) 225(ACTTCCTGTATC,-,0.00) 103(CCAGGCTCCGCG,-,0.00) 119(GCACCCTGGCTG,+,0.00) 561_WT_peak_2338 chr14 92506058 92506837 + 347 NA promoter-TSS (NM_004239) promoter-TSS (NM_004239) -44 NM_004239 9321 Hs.632339 NM_004239 HPRD:05143 TRIP11 ACG1A|CEV14|GMAP-210|TRIP-11|TRIP230 thyroid hormone receptor interactor 11 protein-coding 0.080873 0.598718 384(TCGGCCTCCTGC,+,0.00) 383(CTCGGCCTCC,-,0.00) -24(AGAGGCCT,-,0.00),540(AAGTGGCT,+,0.00) 136(TCGACGCC,+,0.00),200(GGCGTAGA,-,0.00) -125(CCGACCAA,+,0.00),158(TCGCTCGG,-,0.00),336(TCGGCCGG,-,0.00) 501(AGTGCCGGGA,-,0.00) -135(GCCGGGCG,+,0.00) -142(TAGCGCCG,-,0.00) 223(CGCCGGAC,+,0.00) -6(TTTACCAG,-,0.00) 530(ACTGCGCA,+,0.00) 215(CGCGAAGCCGCC,+,0.00) 214(CCGCGAAG,-,0.00),513(CTTGGCGG,+,0.00) 145(GCCGCCATGACA,+,0.00),367(GGGCATCGCGGC,-,0.00) 561_WT_peak_6523 chr6 155054410 155055291 + 346 NA 5' UTR (NM_014892, exon 1 of 20) 5' UTR (NM_014892, exon 1 of 20) 338 NM_014892 22828 Hs.591329 NM_014892 HPRD:11487 SCAF8 RBM16 SR-related CTD-associated factor 8 protein-coding 0.114642 0.744898 698(GGCGGAGGGAGG,-,0.00) 206(CGCCCCGGCAGC,+,0.00),554(GGGCCCGGAGGG,+,0.00) -117(CGCGGCCGCC,-,0.00) 666(CCGGGAGGAGGG,-,0.00) -157(GGCGGCGA,-,0.00),545(TCGAGGCC,+,0.00) 187(CCCCCGCC,-,0.00),243(CCCCCGCC,-,0.00) -44(CGGCCCGA,-,0.00),45(CGGCCCGA,-,0.00) 81(CGGAGGAAGGGG,+,0.00),418(CCGCCTCTTCCG,-,0.00) 484(TAGCGAGG,-,0.00) 78(CGTCGGAG,+,0.00) 66(GAAACAGGAGCC,+,0.00) -48(TGCGCGGC,-,0.00) -72(AGCCGGCGCCGC,-,0.00),44(GCGGCCCGAGCG,+,0.00),238(CGCTCCCCCCGC,-,0.00) -63(CGCGGATCCCCG,+,0.00),-63(CGCGGATCCCCG,-,0.00) -40(CCGACTCG,-,0.00) 254(GCGGCCATGCCG,+,0.00),256(GGCCATGCCGGT,-,0.00),688(GCCGCCCTGGGG,+,0.00) -156(GCGGCGACGC,+,0.00),370(GCCACGCAGC,-,0.00),445(CCTCCGCAGC,-,0.00) 561_WT_peak_582 chr1 161015793 161016203 + 345 NA promoter-TSS (NM_007122) promoter-TSS (NM_007122) -229 NM_207005 7391 Hs.414880 NM_007122 HPRD:01880 USF1 FCHL|FCHL1|HYPLIP1|MLTF|MLTFI|UEF|bHLHb11 upstream transcription factor 1 protein-coding 0.039024 0.484185 75(CCGACGGA,+,0.00) 72(CGTCCGAC,+,0.00),73(GTCCGACG,-,0.00) 561_WT_peak_6290 chr6 32939914 32940559 + 344 NA promoter-TSS (NM_001199456) promoter-TSS (NM_001199456) -625 NM_001199456 6046 Hs.75243 NM_005104 HPRD:03326 BRD2 D6S113E|FSH|FSRG1|NAT|RING3|RNF3 bromodomain containing 2 protein-coding 0.079070 0.622291 2(ATCCGCTT,-,0.00),176(AACCACTT,-,0.00) -149(CCTCCTCCCCGC,+,0.00) -126(GGGCTGGCGCGG,-,0.00) -52(CCTACCGA,+,0.00) -97(TCGTGCTG,+,0.00),21(TCGTCCCG,+,0.00),445(TCGTGCCG,+,0.00) 225(CGTCGGCC,+,0.00),380(GTCCGCCG,-,0.00) -117(CGGGGCTCGGCG,-,0.00) 243(CCGACAAG,-,0.00) -160(GCGGCGAAGC,+,0.00) 561_WT_peak_6191 chr6 27100802 27101859 + 344 NA promoter-TSS (NM_021058) promoter-TSS (NM_021058) 513 NM_021064 8969 Hs.51011 NM_021064 HIST1H2AG H2A.1b|H2A/p|H2AFP|H2AG|pH2A/f histone cluster 1, H2ag protein-coding 0.065279 0.548204 18(GGGCCGGCGCGC,-,0.00) 677(CGGCATGA,-,0.00),802(CTGCACGA,-,0.00) 693(CGCCGCTA,+,0.00),732(CGGCGCTA,+,0.00) 15(TCGGGGCCGGCG,+,0.00) -54(GGGCCGGTCT,+,0.00),-32(GGGCCGAGTG,+,0.00),89(AACGCGGCCC,-,0.00) 669(GGCCAGGGCGGC,-,0.00) 561_WT_peak_439 chr1 145382727 145383269 + 342 NA intron (NM_001039703, intron 68 of 85) intron (NM_001039703, intron 68 of 85) -30193 NM_213653 148738 Hs.632436 NM_145277 HPRD:10521 HFE2 HFE2A|HJV|JH|RGMC hemochromatosis type 2 (juvenile) protein-coding 0.044280 0.449355 -161(CCGGCGGGGCGG,-,0.00) 194(CGTCGATA,+,0.00),261(CGTCTCTA,+,0.00) -155(GGGCGGAGAGTG,-,0.00) 51(AGGTTTTG,-,0.00) 561_WT_peak_5517 chr4 83294781 83295179 + 342 NA 5' UTR (NM_031370, exon 1 of 9) 5' UTR (NM_031370, exon 1 of 9) 169 NM_031369 3184 Hs.480073 NM_002138 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) protein-coding 0.140704 0.684211 8(CAGGGAAGGCGC,-,0.00) 195(CCGACGGA,+,0.00) 49(TCCCTGGCCT,+,0.00) 193(GGCCGACG,-,0.00) 63(CCTTCGCCTCCC,-,0.00) -155(CGCTGCCGCCGC,-,0.00),-144(CCCCGTCCCCGC,-,0.00) 169(GCGCCGCCGC,-,0.00) 561_WT_peak_3071 chr17 19411379 19411675 + 342 NA Intergenic tRNA-Trp-TGG|tRNA|tRNA -25640 NM_018242 55244 Hs.232054 NM_018242 HPRD:07703 SLC47A1 MATE1 solute carrier family 47 (multidrug and toxin extrusion), member 1 protein-coding 0.043919 0.471380 -114(TCCCAGCCCT,+,0.00) -45(TCGTGGCG,+,0.00) -77(TAGCGATG,-,0.00) -117(GCCTCCCAGCCC,+,0.00) -26(CGTCTGAC,+,0.00) -122(CCTTAGCCTCCC,-,0.00) -117(GCCTCCCAGC,-,0.00) 561_WT_peak_1446 chr11 86013045 86013671 + 341 NA non-coding (NR_024598, exon 1 of 4) non-coding (NR_024598, exon 1 of 4) 105 NM_016401 51501 Hs.283322 NM_016401 HPRD:13701 C11orf73 HSPC179|Hikeshi|L7RN6|OPI10 chromosome 11 open reading frame 73 protein-coding 0.047923 0.578947 300(GCGGGGAGGCTG,-,0.00) 133(TCTTGCCG,+,0.00) 275(CGTCGCCA,+,0.00) 43(GAAAACCG,+,0.00) -34(GGCGCGGT,-,0.00) 15(CGCTGGCCCGCC,-,0.00),117(GCGGGGGCAGAG,+,0.00) 400(GCGGGGAAGC,+,0.00) 561_WT_peak_7545 chrX 48979938 48980390 + 340 NA promoter-TSS (NM_015698) promoter-TSS (NM_015698) -13 NM_015698 27238 Hs.503666 NM_015698 GPKOW GPATC5|GPATCH5|Spp2|T54 G patch domain and KOW motifs protein-coding 0.077434 0.582781 -124(AGCCGCCT,-,0.00) 274(CCTCCGCCTCCC,-,0.00) -155(AGATGGCCCCGC,-,0.00) -135(CCGAGTCG,-,0.00),-134(CGAGTCGG,+,0.00) 561_WT_peak_5961 chr5 140090721 140091090 + 340 NA promoter-TSS (NR_026703) promoter-TSS (NR_026703) 44 NR_026703 56664 NR_026703 ENSG00000199990 VTRNA1-1 HVG1|VAULTRC1|VR1|hvg-1|vRNA vault RNA 1-1 ncRNA 0.046070 0.510811 81(TGGGCGGT,-,0.00) -27(CCGGGCTGGCTT,+,0.00) 561_WT_peak_2139 chr14 23789849 23790290 + 339 NA 5' UTR (NM_004643, exon 1 of 7) 5' UTR (NM_004643, exon 1 of 7) 672 NM_004643 8106 Hs.707712 NM_004643 PABPN1 OPMD|PAB2|PABII|PABP-2|PABP2 poly(A) binding protein, nuclear 1 protein-coding 0.031746 0.542986 86(CTGTTTTG,-,0.00) -150(GGGAGCAGAAGG,+,0.00),250(CCTTCGACTCTC,-,0.00) 561_WT_peak_5572 chr4 106067917 106068332 + 339 NA 5' UTR (NM_001127208, exon 1 of 11) 5' UTR (NM_001127208, exon 1 of 11) 282 NM_001127208 54790 Hs.367639 NM_017628 HPRD:07876 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding 0.050602 0.531250 -139(CGCGGCCGCC,-,0.00) -151(CCGCCCCCTCGG,+,0.00) -141(GGCGCGGC,-,0.00) -123(CGCCGGCCCCGC,-,0.00) -129(CCGAGACG,-,0.00) 29(GCTGCAAGGC,+,0.00) 561_WT_peak_5497 chr4 71553870 71554479 + 339 NA promoter-TSS (NM_020368) promoter-TSS (NM_020368) -22 NM_020368 57050 Hs.322901 NM_020368 HPRD:18016 UTP3 CRL1|CRLZ1|SAS10 UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) protein-coding 0.088670 0.590164 73(TTCACCGGAATC,+,0.00),190(GGGGCCGGAAGG,+,0.00) 165(CGTACGCC,-,0.00) 422(GTCCCACG,-,0.00) -149(CGGGTACA,+,0.00) 382(CGCGGAGCAGCT,+,0.00) 561_WT_peak_200 chr1 42216935 42217280 + 339 NA intron (NM_024503, intron 1 of 8) intron (NM_024503, intron 1 of 8) 167271 NM_024503 59269 Hs.403972 NM_024503 HPRD:09442 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding 0.014493 0.482659 561_WT_peak_5767 chr5 61581258 61581807 + 339 NA Intergenic MLT2F|LTR|ERVL -20457 NM_001243953 3796 Hs.558351 NM_004520 KIF2A CDCBM3|HK2|KIF2 kinesin heavy chain member 2A protein-coding 0.009107 0.449091 246(AGGTCGCT,+,0.00) 238(CCCCCGCC,-,0.00) 256(GCTGAGGAGC,+,0.00) 241(CCGCCAGGTCGC,-,0.00) 561_WT_peak_7130 chr8 124169217 124169721 + 338 NA Intergenic tRNA-Met_|tRNA|tRNA -21818 NM_207006 84985 Hs.379821 NM_032899 HPRD:17489 FAM83A BJ-TSA-9 family with sequence similarity 83, member A protein-coding 0.059524 0.548515 -112(TCCAGGCCCT,+,0.00) -53(GGCGGGGG,+,0.00) -79(TCGGGCCG,+,0.00) 212(GCTGCGCA,+,0.00) -56(CTTGGCGG,+,0.00) 561_WT_peak_586 chr1 161368885 161369745 + 338 NA Intergenic CpG -31642 NM_001013625 257177 Hs.534593 NM_001013625 HPRD:13257 C1orf192 Flattop|Fltp chromosome 1 open reading frame 192 protein-coding 0.074419 0.574913 255(AGCCGCCA,-,0.00),433(AACCACTT,-,0.00) -41(CCGACCCA,+,0.00) 139(GTCCGAAG,-,0.00),339(CCTCGGAC,+,0.00) 423(CAAAAACG,+,0.00),451(CGGTTTCG,-,0.00) -6(CCGGAGCCAGAG,+,0.00) 185(GGCGGAACCGCG,+,0.00) 256(GCCGCCAGGGGC,+,0.00) 561_WT_peak_2963 chr16 90061334 90062551 + 338 NA non-coding (NR_003226, exon 11 of 11) non-coding (NR_003226, exon 11 of 11) 14587 NM_024043 79007 Hs.301394 NM_024043 HPRD:08327 DBNDD1 - dysbindin (dystrobrevin binding protein 1) domain containing 1 protein-coding 0.009860 0.574713 561_WT_peak_325 chr1 93297485 93297962 + 338 NA TTS (NM_001252273) TTS (NM_001252273) 129 NM_000969 6125 Hs.532359 NM_000969 HPRD:04699 RPL5 DBA6|L5|PPP1R135 ribosomal protein L5 protein-coding 0.085954 0.629707 261(GGAGAAGGGTGA,-,0.00) -128(CCGACGCC,+,0.00) -91(CGTCCGCG,-,0.00) -37(TAGCGCCG,-,0.00) -130(GGCCGACG,-,0.00) -31(CGCTGGGCCTGC,-,0.00) 561_WT_peak_7035 chr8 64080594 64081518 + 337 NA promoter-TSS (NR_102684) promoter-TSS (NR_102684) -55 NR_102684 101410533 Hs.163027 NR_102684 ENSG00000270673 YTHDF3-AS1 - YTHDF3 antisense RNA 1 (head to head) ncRNA 0.090909 0.669189 684(AGCCACTA,-,0.00) 278(CCGTGAGCGCGG,-,0.00) 525(GAGCGCGAGGCC,+,0.00) 371(CGCGGACG,+,0.00) 507(CCTCTTCCTCCG,-,0.00) -47(CGGCTTTG,-,0.00) 387(GAGAGCGGAAGG,+,0.00),513(CCTCCGACTCCC,-,0.00) 643(GCGGCGGCGGCG,+,0.00),646(GCGGCGGCGGCG,+,0.00) 92(CCGCCTCG,-,0.00),306(CGTGGCGG,+,0.00),453(CCGAGAAG,-,0.00) 91(GCCGCCTCGGCC,+,0.00) 561_WT_peak_6503 chr6 144536990 144537850 + 336 NA Intergenic CpG 65766 NM_003764 8676 Hs.118958 NM_003764 STX11 FHL4|HLH4|HPLH4 syntaxin 11 protein-coding 0.076744 0.606272 469(GCGGGCAGGAGG,-,0.00) 368(GGCGGCGA,-,0.00),434(GGCGGCGA,-,0.00) 400(CCGCCCCAGCCC,+,0.00) 296(CCAACCGA,+,0.00) 237(AGGGCCTGGA,-,0.00) 346(GCCGGGGG,+,0.00) 412(GGGCTGAGAGAG,-,0.00) 554(CGTTGGAC,+,0.00) 217(GAAACTGAAAGC,+,0.00) 205(CCCGCGCA,+,0.00) 199(GCGGCGCCCGCG,+,0.00) 309(CGCCGCTCCGCT,-,0.00) 15(AAAGCGGCCC,-,0.00),108(AACGCCGCCC,-,0.00),121(GGGCCGCGTC,+,0.00) -46(CCGACACG,-,0.00),392(CGTGGCGG,+,0.00) 389(CGGCGTGGCGGC,-,0.00) 313(GCTCCGCTGC,-,0.00) 561_WT_peak_1715 chr12 54121250 54121726 + 335 NA promoter-TSS (NM_020898) promoter-TSS (NM_020898) -181 NM_001143682 57658 Hs.156667 NM_020898 HPRD:13868 CALCOCO1 Cocoa|calphoglin calcium binding and coiled-coil domain 1 protein-coding 0.067227 0.576520 -160(AGGGGAGGGA,-,0.00),-46(AGGGCGGGGA,-,0.00) 82(GGGGGCCGGCTG,+,0.00) 561_WT_peak_3923 chr19 58258105 58258601 + 335 NA 5' UTR (NM_173632, exon 1 of 3) 5' UTR (NM_173632, exon 1 of 3) 189 NM_173632 284309 Hs.720254 NM_173632 HPRD:08237 ZNF776 - zinc finger protein 776 protein-coding 0.072581 0.597586 163(GGCGGCCGCG,+,0.00) 131(TCGACCCC,+,0.00),292(GGCGTCGG,-,0.00) 179(CCCCCGGC,-,0.00) 258(GCGGCGCCTGCT,+,0.00) 36(GCTCTGCAGC,-,0.00) 164(GCGGCCGCGCTG,+,0.00) 561_WT_peak_2868 chr16 67018468 67019158 + 335 NA Intergenic Intergenic -3679 NM_173815 283848 Hs.346947 NM_173815 HPRD:07116 CES4A CES6|CES8 carboxylesterase 4A protein-coding 0.010145 0.499276 43(CAGCACGA,-,0.00),381(TGGCACGA,-,0.00) -55(CCTTGGCCTCCC,-,0.00) 561_WT_peak_1127 chr10 103892374 103893155 + 334 NA promoter-TSS (NM_001288727) promoter-TSS (NM_001288727) 13 NM_001288728 23082 Hs.533551 NM_015062 HPRD:15173 PPRC1 PRC peroxisome proliferator-activated receptor gamma, coactivator-related 1 protein-coding 0.080666 0.624041 229(AATCGGCT,+,0.00) 389(TCGAAGCC,+,0.00),429(GGCGGCGA,-,0.00),503(TGGACGCC,+,0.00),538(TCGATGCC,+,0.00) 357(GGCGGGGG,+,0.00),367(CCCGCGGC,-,0.00),487(GCCGGGCG,+,0.00),551(GCCGCGGG,+,0.00) 319(TCGCGCCG,+,0.00) 125(GCGAGGCCAGGG,+,0.00),244(GCGGCGCCAGCG,+,0.00),560(GCCGGGCCGGAG,+,0.00) 240(CGAGGCGG,+,0.00) 358(GCGGGGGAGC,+,0.00) 558(GAGCCGGGCCGG,-,0.00) 561_WT_peak_4929 chr22 40573896 40574291 + 334 NA 5' UTR (NM_001162501, exon 1 of 23) 5' UTR (NM_001162501, exon 1 of 23) 164 NM_001162501 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing 6B protein-coding 0.012658 0.381313 -62(CCGACAGA,+,0.00) 561_WT_peak_2663 chr16 2827368 2827807 + 334 NA promoter-TSS (NM_207013) promoter-TSS (NM_207013) -290 NM_207013 6923 Hs.172772 NM_007108 HPRD:02874 TCEB2 ELOB|SIII transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B) protein-coding 0.097950 0.693182 -21(GTCCGGCG,-,0.00) 54(GGCAGGCTCCGC,-,0.00) -91(GCGGGCATGGCC,+,0.00) 561_WT_peak_3381 chr17 78865436 78866103 + 333 NA intron (NM_020761, intron 18 of 33) intron (NM_020761, intron 18 of 33) -86337 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA 0.038981 0.528443 206(AGGGCAGGAA,-,0.00) -86(CGGCAGGA,-,0.00) -86(CGGCAGGAGCTG,+,0.00) 254(TTTACCCT,-,0.00) 561_WT_peak_5334 chr3 179322183 179322837 + 332 NA promoter-TSS (NM_001199958) promoter-TSS (NM_001199958) -65 NM_001199958 4711 Hs.730674 NM_002492 HPRD:11956 NDUFB5 CISGDH|SGDH NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa protein-coding 0.064220 0.578626 47(CCAAACCG,+,0.00),337(CGGATTTG,-,0.00) 461(GGGATCCGGAGG,+,0.00) 251(GTAGCCATGGCG,+,0.00),253(AGCCATGGCGGC,-,0.00) 561_WT_peak_339 chr1 100503585 100504185 + 331 NA promoter-TSS (NM_033055) promoter-TSS (NM_033055) 96 NM_033055 64645 Hs.124156 NM_033055 HPRD:11022 HIAT1 - hippocampus abundant transcript 1 protein-coding 0.111667 0.710483 318(GCCTCCGGGGCC,-,0.00) 389(GGCCTCGA,-,0.00) -72(CGGCGGGCGCCC,-,0.00) 414(GCCGCGGG,+,0.00) -29(CGGCACTA,-,0.00) -151(CGGGAGGGGCGG,+,0.00) 197(CGTCTCTA,+,0.00) -144(GGCGGGGCCCGC,-,0.00),-143(GCGGGGCCCGCT,+,0.00) 264(CGCGGACCCGCA,+,0.00),279(CGCCGCTCCGGG,-,0.00) -55(GGCTCGGCCC,-,0.00) -97(GAGGCAGGCCGG,-,0.00) 561_WT_peak_593 chr1 161500772 161501220 + 331 NA Intergenic Intergenic 6960 NM_002155 3310 Hs.654614 NM_002155 HPRD:00775 HSPA6 - heat shock 70kDa protein 6 (HSP70B') protein-coding 0.049107 0.454343 10(TGACCCGGGTTC,+,0.00) -40(CGGGTACG,+,0.00),-38(GGTACGCG,-,0.00),169(CGTACTCG,-,0.00) -99(ACGGTCGG,-,0.00) -46(CCAAACCG,+,0.00) 9(TTGACCCG,-,0.00) 176(GCTTCCTGTCTT,-,0.00) 561_WT_peak_94 chr1 21503138 21503392 + 331 NA 5' UTR (NM_001198801, exon 1 of 35) 5' UTR (NM_001198801, exon 1 of 35) 116 NM_001198802 8672 Hs.467084 NM_003760 HPRD:06802 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma, 3 protein-coding 0.098425 0.694118 -42(CCCCCTCCCCGG,+,0.00) -116(GGCGGGGG,+,0.00),-58(GGCGGGGG,+,0.00) 76(CGGCAGGA,-,0.00) -33(CGGAGGAAGCGG,+,0.00) -145(AACGCGACCC,-,0.00) -17(CTTCTCGG,+,0.00) 561_WT_peak_1680 chr12 49245648 49246228 + 330 NA promoter-TSS (NM_004818) promoter-TSS (NM_004818) 19 NM_004818 9416 Hs.130098 NM_004818 HPRD:09908 DDX23 PRPF28|SNRNP100|U5-100K|U5-100KD|prp28 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 protein-coding 0.079310 0.640275 376(AATCGGCT,+,0.00) 144(CCACCCCCCCGG,+,0.00),168(CTGGGAAGGCGA,-,0.00),308(CCGGGAAGGAAG,-,0.00) 249(GAGCGCCGGCCC,+,0.00) -85(CCGCCCGA,+,0.00) 149(CCCCCGGC,-,0.00) -156(TCGTGCAG,+,0.00) 100(CGTCGCCA,+,0.00) 69(ACCGCCCA,+,0.00),191(TGGGCGGC,-,0.00) 252(CGCCGGCCCCAG,-,0.00) 92(CGCGGAGCCGTC,+,0.00) 76(AACGCGGCCT,-,0.00) 89(CGTCGCGG,+,0.00) 155(GCCGCGAGGC,+,0.00),167(GCTGGGAAGG,+,0.00) 561_WT_peak_2590 chr15 89010359 89010896 + 330 NA promoter-TSS (NM_176805) promoter-TSS (NM_176805) 6 NM_022163 26589 Hs.534261 NM_022163 HPRD:14765 MRPL46 C15orf4|LIECG2|P2ECSL mitochondrial ribosomal protein L46 protein-coding 0.059590 0.578067 -102(AACGGCTT,-,0.00) 65(CCGCCTTACGGG,+,0.00) 43(CCCCCGCC,-,0.00),130(GCCGCGGG,+,0.00) -133(TAGAGACG,-,0.00) 108(CGCGGCTCCCAG,-,0.00) -53(AGCGCCATGGGG,+,0.00) -14(GAGCCAGGCTGC,-,0.00) 561_WT_peak_6037 chr5 178053514 178054077 + 330 NA intron (NM_020666, intron 1 of 12) CpG 259 NM_020666 57396 Hs.406557 NM_020666 HPRD:12140 CLK4 - CDC-like kinase 4 protein-coding 0.099467 0.652482 328(CTCGGCCGCT,-,0.00) 232(AGCCGCCT,-,0.00) 92(GCGACGCC,+,0.00) 18(GACCGCGAGCCC,+,0.00) 85(CAGAACCG,+,0.00) 36(TCCGGAGCCGCG,+,0.00) 43(CCGCGACG,-,0.00),90(CCGCGACG,-,0.00),387(CCGAGTCG,-,0.00) 54(GCGGCCAGGGCC,+,0.00) 42(GCCGCGACGC,+,0.00) 561_WT_peak_4955 chr22 43011220 43011907 + 330 NA promoter-TSS (NM_178136) promoter-TSS (NM_178136) 312 NR_029422 267010 Hs.574857 NR_029422 ENSG00000270022 RNU12 RNU12-1|RNU12L|RNU12P|dJ222E13.7 RNA, U12 small nuclear snRNA 0.052402 0.484012 297(AACCGCTT,-,0.00) -51(CGGGTAAA,+,0.00) 561_WT_peak_314 chr1 89989779 89990183 + 329 NA promoter-TSS (NM_001134476) promoter-TSS (NM_001134476) -416 NM_001134476 23507 Hs.482017 NM_015350 HPRD:18145 LRRC8B TA-LRRP|TALRRP leucine rich repeat containing 8 family, member B protein-coding 0.076733 0.632099 -36(AGGCTGGGGCCC,-,0.00) -11(TAGTGCCG,+,0.00) -163(AGGGTAAA,+,0.00) 78(AGCTGCTCCGCG,-,0.00) 140(GCAGCGATGGCC,+,0.00) 561_WT_peak_4154 chr2 74756469 74757166 + 329 NA 5' UTR (NM_013247, exon 1 of 8) 5' UTR (NM_013247, exon 1 of 8) 157 NM_181575 550 Hs.411480 NM_012103 HPRD:03892 AUP1 - ancient ubiquitous protein 1 protein-coding 0.114778 0.700573 433(TCCGCCTGCTCG,+,0.00) 231(GGACCCGAAGTC,+,0.00) 470(GGCGGGCGAG,+,0.00) 358(TCGGCCTCCCGG,+,0.00) 19(GGCGCCGA,-,0.00),151(TCGCCGCC,+,0.00) 138(GAGCGCCCGGCC,+,0.00) 309(CGCGTCCG,+,0.00) 100(CCCCGGCCCT,+,0.00),513(AGGGCGGGGC,-,0.00) 141(CGCCCGGC,-,0.00),172(CGCCCGGC,-,0.00),280(CCCGCGGC,-,0.00) -40(CAGCACGA,-,0.00) -153(CGTCGGAA,+,0.00),312(GTCCGGCG,-,0.00) 18(AGGCGCCGAAGG,+,0.00),230(GGGACCCGAAGT,+,0.00) -123(AGCGCGCA,+,0.00) 94(CTCCGGCCCCGG,-,0.00),152(CGCCGCCGCCGC,-,0.00) -156(CCGCGTCG,-,0.00) 444(GCGTCCTGGGTG,+,0.00) 561_WT_peak_7031 chr8 59727918 59728212 + 328 NA exon (NM_014729, exon 7 of 9) exon (NM_014729, exon 7 of 9) -155661 NM_003580 8439 Hs.372000 NM_003580 HPRD:09117 NSMAF FAN neutral sphingomyelinase (N-SMase) activation associated factor protein-coding 0.017007 0.579661 -52(GGAGGAGGAGGG,-,0.00) -107(CGGCTGGTGCTG,-,0.00) 102(GGGCCGAGTGGG,-,0.00) 102(GGGCCGAGTG,+,0.00) 110(TGGGCCTGGCTG,+,0.00) 561_WT_peak_2785 chr16 30621109 30621654 + 328 NA promoter-TSS (NR_104166) promoter-TSS (NR_104166) -232 NR_104166 115509 Hs.454685 NM_138447 HPRD:14009 ZNF689 TIPUH1 zinc finger protein 689 protein-coding 0.097248 0.684982 11(TCGGCCTCCTGC,+,0.00) 203(AGGCCCGGAGGG,+,0.00) 10(CTCGGCCTCC,-,0.00) 95(CCGAGAAGCCGG,-,0.00),197(CCGGGGAGGCCC,-,0.00) 167(GAGCCCCTGCCG,+,0.00) -144(CCCGCGGC,-,0.00) 184(GGGCTGAGCGTG,-,0.00) 312(CGGGGAAA,+,0.00) 69(CGGAGCCGAAGG,+,0.00) -59(TGCGCGGG,-,0.00) 95(CCGAGAAG,-,0.00) 82(GGCGCCATGGGA,+,0.00),105(GGCGCCACGGCC,+,0.00),142(GGCGCTGGCGGC,-,0.00) -146(GCCCCGCGGC,-,0.00) 561_WT_peak_7628 chrX 153606509 153607181 + 328 NA promoter-TSS (NM_000117) promoter-TSS (NM_000117) -752 NM_000117 2010 Hs.522823 NM_000117 HPRD:02309 EMD EDMD|LEMD5|STA emerin protein-coding 0.104167 0.728083 481(CCCGCCTGCTCC,+,0.00) 174(GGCGGCCGAC,+,0.00) -107(AGCGGCCT,-,0.00),76(AGCCGCTT,-,0.00),274(AAGCGACT,+,0.00),275(AGCGACTT,-,0.00),399(AGCCGCAT,-,0.00) 13(CTGGGAAGGCGG,-,0.00),219(CTGGGAAGGGGG,-,0.00) 129(GGGCCCGCGCTC,-,0.00) 51(CGCGTAGG,+,0.00),53(CGTAGGCG,-,0.00) 179(CCGACCGG,+,0.00) 355(CCCTCTCACCCC,+,0.00) -10(TGCGCGGG,-,0.00) 125(CCCGGGGCCCGC,-,0.00),126(CCGGGGCCCGCG,+,0.00),343(CGCAGGCCCCGC,-,0.00),421(CGCGGGCCCCGC,-,0.00),422(GCGGGCCCCGCC,+,0.00) 51(CGCGTAGGCGCG,+,0.00) 25(GCCCATGGCAGG,-,0.00) 561_WT_peak_924 chr10 27442931 27444140 + 327 NA promoter-TSS (NM_032844) promoter-TSS (NM_032844) -186 NM_014263 10730 Hs.74647 NM_014263 HPRD:06981 YME1L1 FTSH|MEG4|PAMP|YME1L YME1-like 1 ATPase protein-coding 0.053763 0.547107 -163(GTCTCCGGCCCA,-,0.00),223(CGCCCCGGAAGG,+,0.00) 60(AGCGACCT,-,0.00) 108(GCGGGGAGGCGC,-,0.00),226(CCCGGAAGGCGA,-,0.00) 855(TCTACGCC,+,0.00) 560(CGCCCGGC,-,0.00) 381(TTTACCCT,-,0.00) 1035(GGGCCGCGGT,+,0.00) 527(CCGAGTAG,-,0.00) -32(GGGCAGGGCGGG,-,0.00) 561_WT_peak_5731 chr5 43483929 43484814 + 327 NA promoter-TSS (NM_022483) promoter-TSS (NM_022483) -379 NM_022483 64417 Hs.732093 NM_022483 HPRD:07965 C5orf28 - chromosome 5 open reading frame 28 protein-coding 0.061017 0.551919 207(TGGCCCGGAAGC,+,0.00) -62(GTCGGCCGAG,+,0.00),290(CTCGGCCGTC,-,0.00) 99(AAGTGTCT,+,0.00) -117(TCGGTCGG,-,0.00),398(CCGACCGG,+,0.00) -104(TAGAGACG,-,0.00),-15(AAGCGACG,-,0.00) -63(CGTCGGCC,+,0.00) 148(TTTAGCCG,-,0.00) -131(AGCGGCTCCGCC,-,0.00) -128(GGCTCCGCCC,-,0.00) 336(CCGCGAAG,-,0.00) 389(GCGACCTGGCCG,+,0.00) 561_WT_peak_496 chr1 149822010 149824109 + 327 NA promoter-TSS (NR_036461) promoter-TSS (NR_036461) 431 NM_001040874 723790 Hs.530461 NM_001040874 ENSG00000203812 HIST2H2AA4 H2A/R histone cluster 2, H2aa4 protein-coding 0.082420 0.605714 1510(GGCGGCGGAG,+,0.00) 640(GGGCCGGCGCGC,-,0.00) 927(GCCCGGCCCG,+,0.00) 1269(GCCGCGGG,+,0.00),1623(GGCGGGGG,+,0.00) 82(TCTTGCCG,+,0.00),140(CGGCGCGA,-,0.00),561(TCGTCCCG,+,0.00) 1020(CACTCTCAGTCC,+,0.00),1720(GGGCGGAAAGGG,-,0.00) 176(CAAGACCG,+,0.00),1486(CTGTTTTG,-,0.00) 575(CCTTCAGTTCCC,-,0.00),1657(GGGAGCTGTAGG,+,0.00) 608(GCTGCGCA,+,0.00) 558(CGCTCGTCCCGC,-,0.00),1305(GCGGAGCGCGCG,+,0.00) 711(AACGCGGCTC,-,0.00),821(GGGCGGCGTC,+,0.00),926(AGCCCGGCCC,-,0.00) 623(CTACGCGG,+,0.00),1232(CCGCCACG,-,0.00),1604(CCGCCAAG,-,0.00) 540(CGCGCCAAGGCC,+,0.00),816(GCCCAGGGCGGC,-,0.00),1231(GCCGCCACGGTC,+,0.00),1504(CGCCCTGGCGGC,-,0.00) -76(CAGGCGGGACGC,-,0.00),1503(GCGCCCTGGCGG,+,0.00) 561_WT_peak_442 chr1 145397617 145398067 + 326 NA intron (NM_001039703, intron 68 of 85) intron (NM_001039703, intron 68 of 85) -15349 NM_213653 148738 Hs.632436 NM_145277 HPRD:10521 HFE2 HFE2A|HJV|JH|RGMC hemochromatosis type 2 (juvenile) protein-coding 0.031111 0.463415 100(GAACCCGGGTCA,-,0.00) -118(TGGACGCC,+,0.00) -82(CGCGCACG,+,0.00) 105(CGGGTCAA,+,0.00) 561_WT_peak_2735 chr16 22366757 22367103 + 326 NA intron (NM_001802, intron 2 of 4) LTR54|LTR|ERV1 19008 NM_001802 1039 Hs.513430 NM_001802 HPRD:06681 CDR2 CDR62|Yo cerebellar degeneration-related protein 2, 62kDa protein-coding 0.000000 0.374640 -34(TCCCTGCCCT,+,0.00) 561_WT_peak_7477 chr9 137029190 137029790 + 326 NA TTS (NR_023344) TTS (NR_023344) 196 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA 0.063333 0.512479 253(CGTATGCG,-,0.00) 2(CGTCTCTA,+,0.00) 63(CTACTCGG,+,0.00) 561_WT_peak_2467 chr15 45492511 45492947 + 325 NA intron (NM_138356, intron 1 of 7) intron (NM_138356, intron 1 of 7) 644 NM_138356 90525 Hs.310399 NM_138356 HPRD:14272 SHF - Src homology 2 domain containing F protein-coding 0.055046 0.524027 -59(TGACTCGGATTC,+,0.00) 119(CCCTCGCAGCCA,+,0.00) 167(CGATTTTG,-,0.00) 62(AGCCCCGCCC,-,0.00),204(TGGCCGATTT,+,0.00) 119(CCCTCGCAGC,-,0.00) 561_WT_peak_1722 chr12 56435425 56435914 + 325 NA promoter-TSS (NM_001029) promoter-TSS (NM_001029) -17 NM_001029 6231 Hs.447562 NM_001029 HPRD:04743 RPS26 DBA10|S26 ribosomal protein S26 protein-coding 0.061350 0.551020 -88(GGGGGAGGGGGG,-,0.00) 65(GCTTCCGAGTCG,-,0.00) 289(CGCGTAGG,+,0.00) 26(TAGCGTCG,-,0.00) -35(CCCTCTCTGGCC,+,0.00) 130(CGGCTAAA,+,0.00) 76(GGCGCGGC,-,0.00) 69(CCGAGTCG,-,0.00),70(CGAGTCGG,+,0.00),288(CCGCGTAG,-,0.00) -153(GCCCAGGGCGTC,-,0.00) 561_WT_peak_520 chr1 151042951 151043701 + 325 NA 5' UTR (NM_144618, exon 1 of 9) 5' UTR (NM_144618, exon 1 of 9) 246 NM_144618 126626 Hs.654699 NM_144618 HPRD:14536 GABPB2 - GA binding protein transcription factor, beta subunit 2 protein-coding 0.057333 0.592543 458(GGAGGAAGGGGA,-,0.00),478(GGAGGAAGGGGA,-,0.00) 457(GGGAGGAAGGGG,+,0.00),477(GGGAGGAAGGGG,+,0.00) 387(CCTCGGAC,+,0.00) 431(GCGGGGGCAGCG,+,0.00) 411(CGCGGCTCCCCG,-,0.00) 373(GCTTCCCAGC,-,0.00),535(GCTGGGGAGC,+,0.00) 561_WT_peak_1803 chr12 94070889 94071631 + 325 NA intron (NM_003805, intron 1 of 2) intron (NM_003805, intron 1 of 2) 109 NM_003805 8738 Hs.38533 NM_003805 HPRD:04584 CRADD MRT34|RAIDD CASP2 and RIPK1 domain containing adaptor with death domain protein-coding 0.048518 0.528937 238(TAGCGTCT,+,0.00) 166(CCCCCGCC,-,0.00) 547(GGGTTGCGAGGG,-,0.00) -30(TTTACCCA,-,0.00),393(CGGGTCAA,+,0.00) 78(ACTTCCTGTTTA,-,0.00),200(GTAACAGGAATC,+,0.00),424(TCTTCCTGTTTG,-,0.00) 266(GCTTCCCCGC,-,0.00) 561_WT_peak_3837 chr19 49148104 49148349 + 324 NA intron (NM_001217, intron 2 of 8) intron (NM_001217, intron 2 of 8) 1225 NM_001217 770 Hs.428446 NM_001217 HPRD:05225 CA11 CARPX1 carbonic anhydrase XI protein-coding 0.024490 0.540650 -129(ACCGCGCC,+,0.00) 561_WT_peak_1769 chr12 74931528 74931996 + 324 NA 5' UTR (NM_001136262, exon 1 of 1) 5' UTR (NM_001136262, exon 1 of 1) 211 NM_001136262 552889 Hs.744849 NM_001136262 ENSG00000253719 ATXN7L3B - ataxin 7-like 3B protein-coding 0.081197 0.611940 109(AGGCCTCT,+,0.00) -145(GCGCAGGCGCTC,-,0.00) -62(GCGCTGAGACGG,-,0.00),173(CCCTCTCCGCAC,+,0.00) -53(CGGTTTGG,-,0.00) -94(GGGAGCGGAAGA,+,0.00) -159(TGCGCGGA,-,0.00),124(GGCGCGGC,-,0.00) 125(GCGCGGCCCGCG,+,0.00),134(GCGGAGCCAGAC,+,0.00) 124(GGCGCGGCCC,-,0.00) 561_WT_peak_4406 chr2 192540494 192541012 + 324 NA Intergenic Intergenic -2045 NM_001254736 64859 Hs.591610 NM_022837 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding 0.003861 0.410405 561_WT_peak_411 chr1 119682967 119683349 + 324 NA intron (NM_201263, intron 1 of 5) CpG 137 NM_201263 10352 Hs.523506 NM_015836 HPRD:05295 WARS2 TrpRS tryptophanyl tRNA synthetase 2, mitochondrial protein-coding 0.068063 0.558747 55(CGGGAGCAGCTG,+,0.00) -121(CGTCACTA,+,0.00) 145(GGGCGGAGCC,+,0.00) 561_WT_peak_2784 chr16 30582730 30583362 + 324 NA 5' UTR (NM_145271, exon 1 of 3) 5' UTR (NM_145271, exon 1 of 3) 682 NM_145271 146542 Hs.301463 NM_145271 HPRD:14070 ZNF688 - zinc finger protein 688 protein-coding 0.080696 0.635071 301(GGACCCGGAAGG,+,0.00) 443(AAGCCGCT,+,0.00),444(AGCCGCTT,-,0.00) 102(CCGCCTCCCCGC,+,0.00),108(CCCCGCTCCCGG,+,0.00) 23(TCGGCGCC,+,0.00) -34(CGTCCGCG,-,0.00) 60(GCCTCGCAGCCC,+,0.00) 292(CGGGTTAA,+,0.00) -83(TGCGCGGG,-,0.00) 145(GGGCGGCCCCGC,-,0.00) 45(GGGCGGCGCC,+,0.00) -31(CCGCGAAG,-,0.00) 49(GGCGCCATGGGG,+,0.00),51(CGCCATGGGGCC,-,0.00),81(GCCGCCAGGTCC,+,0.00) 60(GCCTCGCAGC,-,0.00) -2(CAACCAGGCCGG,-,0.00) 561_WT_peak_7224 chr9 19379840 19380562 + 324 NA promoter-TSS (NM_001010) promoter-TSS (NM_001010) 34 NM_001010 6194 Hs.408073 NM_001010 HPRD:01592 RPS6 S6 ribosomal protein S6 protein-coding 0.069252 0.611342 489(GGGCGCCAGCGG,+,0.00) 365(TCGGTTGG,-,0.00) -23(TCCCGGCCCG,+,0.00) 415(CAAACCCG,+,0.00),476(GGGTTTTG,-,0.00) 319(TGGGCGGT,-,0.00) -36(GCCACCATGGCG,+,0.00) -59(CCGTCCCGGCTG,+,0.00) 561_WT_peak_1297 chr11 59327712 59328018 + 324 NA Intergenic tRNA-Lys-AAA|tRNA|tRNA 34766 NR_036120 100422880 NR_036120 MIR3162 - microRNA 3162 ncRNA 0.029412 0.433225 -69(CCGCCCGA,+,0.00),-14(CCGACTGA,+,0.00) 561_WT_peak_3951 chr2 7049915 7050213 + 323 NA Intergenic Intergenic -7459 NM_014746 9781 Hs.22146 NM_014746 HPRD:11510 RNF144A RNF144|UBCE7IP4 ring finger protein 144A protein-coding 0.003356 0.414716 -31(AAGTGGCT,+,0.00) 561_WT_peak_6058 chr5 180618427 180619104 + 322 NA non-coding (NR_108031, exon 1 of 2) non-coding (NR_108031, exon 1 of 2) 143 NR_108031 102577426 Hs.277359 NR_108031 LOC102577426 - uncharacterized LOC102577426 ncRNA 0.091581 0.637168 22(CCAGGAAGGCGG,-,0.00) 453(GGCGGGGG,+,0.00) -98(GGAAAAGGAAGC,+,0.00) -163(AGCGCGCA,+,0.00),-34(TGCGCGGT,-,0.00),216(GCCGCGCA,+,0.00) 203(CGCTGTCGCCGG,-,0.00),209(CGCCGGCGCCGC,-,0.00),449(GCGGGGCGGGGG,+,0.00) 218(CGCGCAGCCGCA,+,0.00) 244(CGGCCGAGTT,+,0.00) 347(CCGCGAAG,-,0.00) 216(GCCGCGCAGC,-,0.00) 561_WT_peak_3900 chr19 56111137 56111601 + 320 NA promoter-TSS (NM_032836) promoter-TSS (NM_032836) -361 NM_153219 147807 Hs.440291 NM_153219 HPRD:15817 ZNF524 - zinc finger protein 524 protein-coding 0.075431 0.574194 -101(TCGGACTCCTCC,+,0.00) 19(GGCTTCGA,-,0.00),23(TCGAAGCC,+,0.00) -12(CGGCACCA,-,0.00) -103(CCTCGGAC,+,0.00) 69(TTTTCCCG,-,0.00) 210(GGCGCGGC,-,0.00) 561_WT_peak_2621 chr15 93443301 93444041 + 319 NA 5' UTR (NM_001042572, exon 1 of 13) 5' UTR (NM_001042572, exon 1 of 13) 120 NM_001271 1106 Hs.220864 NM_001271 HPRD:03669 CHD2 EEOC chromodomain helicase DNA binding protein 2 protein-coding 0.021622 0.475034 -111(CCCCCCTCCCCC,+,0.00) 112(TGGCGGCT,+,0.00) 93(CTGGGAAGGAGG,-,0.00) 238(GGGGTCGA,-,0.00) 292(TCGTGCCT,+,0.00) 49(GGGGTAAA,+,0.00) -55(CCTTAGGCTCCC,-,0.00) 354(GAAGCCATGGCG,+,0.00),356(AGCCATGGCGCA,-,0.00) 92(GCTGGGAAGG,+,0.00) 561_WT_peak_4336 chr2 157257129 157257881 + 318 NA Intergenic Intergenic -34460 NM_001083112 2820 Hs.512382 NM_000408 HPRD:00715 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 (mitochondrial) protein-coding 0.026596 0.397078 383(GAACCCGGGCCT,-,0.00) 151(CTAGGCCGCC,-,0.00) 471(AGACACTT,-,0.00) 155(GCCGCCCA,+,0.00) 148(CATCTAGGCCGC,-,0.00) 561_WT_peak_6821 chr7 112090559 112091109 + 318 NA non-coding (NR_120333, exon 1 of 12) non-coding (NR_120333, exon 1 of 12) 271 NR_120333 3475 Hs.7879 NM_001550 IFRD1 PC4|TIS7 interferon-related developmental regulator 1 protein-coding 0.094545 0.640653 309(CGAACCGGACTC,+,0.00) -76(CTCAGCCGCC,-,0.00) 101(GGCGGCGA,-,0.00) -119(CCCCCGCC,-,0.00) 178(CGGCACGG,-,0.00) -21(CCTCGCTA,+,0.00),94(CAGCGACG,-,0.00) -80(GCCTCTCAGCCG,+,0.00),361(GGCCTGAGAGTG,-,0.00) 13(GTCCCACG,-,0.00) -51(CGAGTAAA,+,0.00) -133(ACCGCCCA,+,0.00),-2(TGGGCGGC,-,0.00) 277(CGCTGCTCCTCG,-,0.00) 330(GGCCGTGGGGGC,-,0.00) -80(GCCTCTCAGC,-,0.00) 149(CCGGCCAGGCTG,+,0.00) 561_WT_peak_631 chr1 174968114 174968874 + 318 NA promoter-TSS (NM_014412) promoter-TSS (NM_014412) -77 NM_001007214 27101 Hs.508524 NM_014412 HPRD:07316 CACYBP GIG5|S100A6BP|SIP calcyclin binding protein protein-coding 0.059211 0.533509 432(CGCGGAGGCTGA,-,0.00) 280(CGTCGGAA,+,0.00) -138(TGCGCGCT,-,0.00),312(ACCGCGCC,+,0.00) 459(CAACATGGCGGC,-,0.00) 561_WT_peak_521 chr1 151138296 151138764 + 317 NA promoter-TSS (NM_024041) promoter-TSS (NM_024041) 32 NM_024041 79005 Hs.732060 NM_024041 HPRD:12162 SCNM1 - sodium channel modifier 1 protein-coding 0.057692 0.545842 245(AGCCGCTT,-,0.00) -122(AGGGCCTGGA,-,0.00) 123(CGAAACCG,+,0.00) -135(CCGCCAAG,-,0.00) 561_WT_peak_6155 chr6 26216016 26216922 + 317 NA promoter-TSS (NM_021052) promoter-TSS (NM_021052) 403 NM_003518 8339 Hs.591809 NM_003518 HPRD:11897 HIST1H2BG H2B.1A|H2B/a|H2BFA|dJ221C16.8 histone cluster 1, H2bg protein-coding 0.046358 0.497244 169(CTCGGCCTCC,-,0.00) 378(CCGGGAAGCAGC,-,0.00) 94(CGCCCGGC,-,0.00) 349(CTTCGGAC,+,0.00) -7(CAAAAGCG,+,0.00),195(CAAAATCG,+,0.00) 561_WT_peak_6975 chr8 37619674 37620339 + 316 NA promoter-TSS (NM_007198) promoter-TSS (NM_007198) -95 NM_007198 11212 Hs.304792 NM_007198 HPRD:16060 PROSC - proline synthetase co-transcribed homolog (bacterial) protein-coding 0.081203 0.645646 274(GGAACCGGAAGA,+,0.00) 360(GTCGGCCGAG,+,0.00),428(GGCGGCCGCG,+,0.00) -45(CCGGGAACGGGC,-,0.00) 322(GGCGTCGG,-,0.00) 310(GGCCTGGGGCTC,-,0.00) 304(GCCGGGGG,+,0.00),432(GCCGCGGG,+,0.00) 279(CGGAAGATGGTG,+,0.00) 324(CGTCGGTC,+,0.00) 120(CAAAACCT,+,0.00) -9(GAAACAGGATCC,+,0.00) 423(GGCGCGGC,-,0.00),466(TGGGCGGC,-,0.00) 561_WT_peak_2336 chr14 91976146 91977290 + 316 NA 5' UTR (NM_001284280, exon 1 of 15) 5' UTR (NM_001284280, exon 1 of 15) 106 NM_001284280 55671 Hs.533887 NM_017936 HPRD:11176 SMEK1 FLFL1|KIAA2010|PP4R3A|smk-1|smk1 SMEK homolog 1, suppressor of mek1 (Dictyostelium) protein-coding 0.117133 0.715284 15(CCCGCCTCCGCC,+,0.00),497(GGAGGAGGCGGG,-,0.00) -118(GCCTCCGGCTCC,-,0.00),891(GCTTCCGGGGAA,-,0.00) -138(CTGGGCCGCC,-,0.00),227(CCCGGCCGCC,-,0.00),269(CTCCGCCGCC,-,0.00) 887(AAACGCTT,-,0.00) -114(CCGGCTCCCCGG,+,0.00) 641(GGCGTGGA,-,0.00) 441(CCGACGGA,+,0.00),922(TAGGTCGG,-,0.00) -74(CGCCCGGC,-,0.00),225(CCCCCGGC,-,0.00) 496(CGGAGGAGGCGG,+,0.00) -105(CGGCGCTA,+,0.00) 439(TTCCGACG,-,0.00),591(GTCCGTCG,-,0.00) 304(CAAAACCG,+,0.00),333(CAAAAGCG,+,0.00) 807(TTTTCCCG,-,0.00) -117(CCTCCGGCTCCC,-,0.00),137(CCTTCCGCTCCC,-,0.00) -54(GCCGCGCA,+,0.00),231(GCCGCCCA,+,0.00),577(TGGGCGGT,-,0.00) -34(CTCCCGCCCCGC,-,0.00),52(CGCCGCCGCCGC,-,0.00),74(CGCCGCCGCCGC,-,0.00),77(CGCCGCCGCCGC,-,0.00),345(GCGGGGCCACCC,+,0.00),668(CGCGGGCCCCGG,-,0.00) 335(AAAGCGGCGC,-,0.00),815(GGGCCGCCTT,+,0.00) 34(CCGCGAAG,-,0.00) 943(GCCGCCGTGGGT,+,0.00) -54(GCCGCGCAGC,-,0.00),-29(GCCCCGCAGC,-,0.00),51(GCGCCGCCGC,-,0.00) 561_WT_peak_3753 chr19 38826209 38826447 + 315 NA promoter-TSS (NM_021185) promoter-TSS (NM_021185) -115 NM_021185 57828 Hs.324335 NM_021185 HPRD:12698 CATSPERG C19orf15 catsper channel auxiliary subunit gamma protein-coding 0.058824 0.615063 61(TGGGCGGC,-,0.00) -67(ACCAGGCCCCGC,-,0.00) 561_WT_peak_211 chr1 45241204 45241663 + 315 NA promoter-TSS (NR_000024) promoter-TSS (NR_000024) -104 NR_000015 26811 NR_000015 SNORD55 RNU39|RNU55|SNORD39|U39|U55 small nucleolar RNA, C/D box 55 snoRNA 0.098039 0.678261 91(GGTTCCGGGCCG,-,0.00) 43(TTCGGCCGCC,-,0.00) -106(CCGAGCGA,+,0.00) 1(CCCCCGGC,-,0.00),99(GCCGCGGG,+,0.00) 282(AGTCGCTA,+,0.00) 67(GGGCTGCGAAGG,-,0.00) -72(CGGGTGAA,+,0.00) 47(GCCGCCCA,+,0.00),208(TGCGCGGT,-,0.00) -163(GGGCAGCGTT,+,0.00) -34(GCTTCACAGC,-,0.00),69(GCTGCGAAGG,+,0.00) 154(CCGGCCTGGCCG,+,0.00),155(CGGCCTGGCCGC,-,0.00) 561_WT_peak_2835 chr16 47007612 47008073 + 314 NA promoter-TSS (NM_005880) promoter-TSS (NM_005880) -217 NM_005880 10294 Hs.368078 NM_005880 HPRD:07105 DNAJA2 CPR3|DJ3|DJA2|DNAJ|DNJ3|HIRIP4|PRO3015|RDJ2 DnaJ (Hsp40) homolog, subfamily A, member 2 protein-coding 0.080260 0.590909 -39(AGGCGGCT,+,0.00) -90(GGGGTCGA,-,0.00) 155(CGCCTGGCGCGC,-,0.00) -136(CGTCGCTG,+,0.00) -102(GGCGCGGC,-,0.00),98(TGCGCAGC,-,0.00) 127(AAATGGGCCC,-,0.00) 149(GAGGCCCGCCTG,+,0.00) 561_WT_peak_6884 chr7 148660249 148660502 + 313 NA Intergenic Intergenic 65407 NM_004911 9601 Hs.93659 NM_004911 HPRD:06501 PDIA4 ERP70|ERP72|ERp-72 protein disulfide isomerase family A, member 4 protein-coding 0.003953 0.338583 -51(AGCCACTT,-,0.00) -1(GTCCGATG,-,0.00) 561_WT_peak_3726 chr19 35953611 35953857 + 312 NA Intergenic HAL1|LINE|L1 13117 NM_005306 2867 Hs.248056 NM_005306 HPRD:04824 FFAR2 FFA2R|GPR43 free fatty acid receptor 2 protein-coding 0.012195 0.429150 -79(TTTATCCG,-,0.00) 561_WT_peak_5567 chr4 103748217 103748713 + 311 NA promoter-TSS (NM_181892) promoter-TSS (NM_181892) -125 NM_181892 7323 Hs.518773 NM_003340 HPRD:04269 UBE2D3 E2(17)KB3|UBC4/5|UBCH5C ubiquitin-conjugating enzyme E2D 3 protein-coding 0.092742 0.688129 29(TCCCCCTCCTCC,+,0.00),32(CCCTCCTCCTCC,+,0.00),235(TCGGCCTCCTCC,+,0.00) 234(CTCGGCCTCC,-,0.00) -36(AGCCACCT,-,0.00) 239(CCTCCTCCCCGC,+,0.00) -48(GCGCGCCCGCCC,+,0.00) 196(CGCGTACA,+,0.00),287(CGCGCACG,+,0.00) 171(TCCCTGCCCT,+,0.00),267(CCCCGGCCCT,+,0.00) 139(CTTACCCG,-,0.00) 114(GCCGCCCA,+,0.00) 561_WT_peak_6507 chr6 146136036 146136420 + 311 NA promoter-TSS (NM_032145) promoter-TSS (NM_032145) 216 NR_038244 100507557 Hs.124537 NR_038244 ENSG00000235652 LOC100507557 - uncharacterized LOC100507557 ncRNA 0.070312 0.589610 55(GAGCAGCAGCCC,+,0.00) -98(CCCGCGGC,-,0.00) 37(TCGCGCCG,+,0.00) -156(CGTGGCTA,+,0.00),40(CGCCGCTA,+,0.00) -96(CGCGGCGCCCCG,+,0.00),-96(CGCGGCGCCCCG,-,0.00) -81(GGCTCCGCCC,-,0.00) 561_WT_peak_3852 chr19 49946839 49947240 + 309 NA Intergenic CpG -2231 NM_020309 57030 Hs.375616 NM_020309 HPRD:05551 SLC17A7 BNPI|VGLUT1 solute carrier family 17 (vesicular glutamate transporter), member 7 protein-coding 0.079800 0.646766 31(TCGGCCCCCTCC,+,0.00) 30(CTCGGCCCCC,-,0.00) 72(AGCGGCCT,-,0.00) 107(GCCGCGCA,+,0.00) -83(AGCGGGCCCCGC,-,0.00),-82(GCGGGCCCCGCC,+,0.00) 28(TACTCGGCCC,-,0.00) -78(GCCCCGCCGC,-,0.00) -164(CCGGCCCGGGTG,+,0.00) 561_WT_peak_4526 chr2 242254136 242255102 + 309 NA promoter-TSS (NM_006155) promoter-TSS (NM_006155) 17 NM_001008491 4735 Hs.721234 NM_004404 HPRD:03297 SEPT2 DIFF6|NEDD-5|NEDD5|Pnutl3|hNedd5 septin 2 protein-coding 0.084886 0.654602 262(CCGCCCTCCCCC,+,0.00) 104(CGGGCCGGAGCC,+,0.00) -151(AACCACTT,-,0.00),752(AGCCGCCA,-,0.00) 62(GCGGGAGGGAGG,-,0.00),262(CCGCCCTCCCCC,+,0.00) 478(TCGGCGCC,+,0.00) 251(CCGCGCCAGCTC,+,0.00),284(GGGCCCCAGCCC,+,0.00) 372(CGTGCGCG,-,0.00),473(CGTACTCG,-,0.00) 461(CCCCCGCC,-,0.00) 175(CGTCGCTG,+,0.00) 128(CCCGCTCAGGCC,+,0.00) 356(CGTCGGCC,+,0.00) 708(GAAAACCG,+,0.00) 525(GAGAGGCGAAGG,+,0.00) 250(GCCGCGCC,+,0.00) 273(CGCGGGGCGGCG,+,0.00) 248(GGGCCGCGCC,+,0.00),258(AGCTCCGCCC,-,0.00) 331(CCGACTCG,-,0.00) 141(CAGCCAGGCACG,-,0.00) 561_WT_peak_940 chr10 32344691 32345351 + 309 NA 5' UTR (NM_004521, exon 1 of 26) 5' UTR (NM_004521, exon 1 of 26) 350 NM_004521 3799 Hs.327736 NM_004521 HPRD:07214 KIF5B HEL-S-61|KINH|KNS|KNS1|UKHC kinesin family member 5B protein-coding 0.109091 0.689864 66(GGCGGCCGGG,+,0.00),190(GGCGGCCGGG,+,0.00) 195(CCGGGGAGCCGG,-,0.00) 306(CGTCCGCG,-,0.00) 453(CCGGCCGA,+,0.00) -95(GGCGGGGG,+,0.00) -124(CGGCCCGA,-,0.00) -120(CCGAAGAAGCGG,+,0.00),388(CACCTTCTTCCT,-,0.00) 110(CGCCGGAC,+,0.00) 58(CCGGGGCCGGCG,+,0.00),275(GCGGCGGCAGCG,+,0.00) 196(CGGGGAGCCGGG,+,0.00),310(CGCGGCTCCTCA,-,0.00) 266(GCAGCCATGGCG,+,0.00),268(AGCCATGGCGGC,-,0.00) 160(GCTGCGCCGC,+,0.00),160(GCTGCGCCGC,-,0.00),314(GCTCCTCAGC,-,0.00) 561_WT_peak_3484 chr18 33077737 33078106 + 309 NA promoter-TSS (NM_194281) promoter-TSS (NM_194281) 34 NM_001098817 125476 Hs.464903 NM_194281 HPRD:10719 INO80C C18orf37|IES6|hIes6 INO80 complex subunit C protein-coding 0.067751 0.613514 -70(GCCGCCATCGCA,+,0.00) 561_WT_peak_3804 chr19 45988599 45988920 + 309 NA 3' UTR (NM_005619, exon 11 of 11) 3' UTR (NM_005619, exon 11 of 11) 7744 NM_206901 6253 Hs.47517 NM_005619 HPRD:04421 RTN2 NSP2|NSPL1|NSPLI|SPG12 reticulon 2 protein-coding 0.052960 0.649068 108(CGAGGAGGGGGG,-,0.00) -29(CCCGCGGC,-,0.00) 102(TCGGGCCG,+,0.00) 91(CGGGAAAA,+,0.00) -36(AGCAGGCCCCGC,-,0.00) -31(GCCCCGCGGC,-,0.00) 561_WT_peak_3 chr1 713702 714078 + 308 NA non-coding (NR_033908, exon 1 of 7) non-coding (NR_033908, exon 1 of 7) 178 NR_033908 100288069 Hs.527521 NR_033908 ENSG00000228327 LOC100288069 - uncharacterized LOC100288069 ncRNA 0.050532 0.580902 -50(CTCGGCCGCG,-,0.00) 155(CGTCGCCA,+,0.00) -46(GCCGCGCC,+,0.00) 189(AGACCCGCCC,-,0.00) -54(CCGCCTCG,-,0.00) 109(GGCACCATGGCG,+,0.00),111(CACCATGGCGCC,-,0.00) -130(GCTGGGGGGC,+,0.00) 561_WT_peak_926 chr10 27531080 27531947 + 308 NA promoter-TSS (NM_001301253) promoter-TSS (NM_001301253) -445 NM_001301253 91452 Hs.530597 NM_145698 HPRD:12415 ACBD5 - acyl-CoA binding domain containing 5 protein-coding 0.041522 0.428571 -104(AGGCGTCT,+,0.00),-51(AGCCGGTT,-,0.00),-1(AAGTGTCT,+,0.00) -90(CGCGGACG,+,0.00) -38(TCGTGCCT,+,0.00) -133(GTCCGGCG,-,0.00) 66(CGGGTTTG,-,0.00) 561_WT_peak_3194 chr17 41464607 41464885 + 307 NA intron (NR_027413, intron 1 of 3) U2|snRNA|snRNA 1520 NR_027412 100130581 Hs.546897 NR_027412 ENSG00000188825 LINC00910 - long intergenic non-protein coding RNA 910 ncRNA 0.039568 0.473118 -102(TCTCCCTGCTCC,+,0.00),19(TCGCCTTCCTCC,+,0.00) -139(TCGACGCG,+,0.00),16(TCGTCGCC,+,0.00) 75(GAGCCCCAGCCT,+,0.00) 561_WT_peak_4644 chr20 43324394 43324704 + 307 NA Intergenic MLT1I|LTR|ERVL-MaLR -19336 NM_003881 8839 Hs.592145 NM_003881 HPRD:16020 WISP2 CCN5|CT58|CTGF-L WNT1 inducible signaling pathway protein 2 protein-coding 0.000000 0.427653 -99(AGAGACTT,-,0.00) -128(CCCCTTCCTCCC,-,0.00) 561_WT_peak_7263 chr9 42367967 42368231 + 307 NA promoter-TSS (NM_001012419).3 promoter-TSS (NM_001012419).3 -204 NM_001012421 441430 Hs.632663 NM_001012421 HPRD:18652 ANKRD20A2 - ankyrin repeat domain 20 family, member A2 protein-coding 0.106061 0.728302 20(AACGGCTT,-,0.00) -64(GAGCTGCAGCCC,+,0.00) 40(TCGGTCTG,-,0.00) -154(CCTTCTCAGGCC,+,0.00),42(GGTCTGAGAGGT,-,0.00) 22(CGGCTTTG,-,0.00) -141(GGCTGGCTGCGC,-,0.00),-39(GCGCCGCCAGGG,+,0.00) -37(GCCGCCAGGGAG,+,0.00) -144(CCGGGCTGGCTG,+,0.00) 561_WT_peak_1358-2 chr11 65266294 65267479 + 306 NA non-coding (NR_002819, exon 1 of 1) non-coding (NR_002819, exon 1 of 1) 1653 NR_002819 378938 Hs.621695 NR_002819 ENSG00000251562 MALAT1 HCN|LINC00047|MALAT-1|NCRNA00047|NEAT2|PRO2853|mascRNA metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) ncRNA 0.023629 0.346543 -55(TTTAACCG,-,0.00) 816(GAAACAAAAAGC,+,0.00) 561_WT_peak_1358 chr11 65265655 65266237 + 306 NA non-coding (NR_002819, exon 1 of 1) non-coding (NR_002819, exon 1 of 1) 713 NR_002819 378938 Hs.621695 NR_002819 ENSG00000251562 MALAT1 HCN|LINC00047|MALAT-1|NCRNA00047|NEAT2|PRO2853|mascRNA metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) ncRNA 0.041237 0.521441 265(AGGCTGGGGCTC,-,0.00) 405(GGGTTTTG,-,0.00) -13(GGGGGCTGGCGG,+,0.00) 561_WT_peak_1358-3 chr11 65268070 65268076 + 306 NA non-coding (NR_002819, exon 1 of 1) non-coding (NR_002819, exon 1 of 1) 2840 NR_002819 378938 Hs.621695 NR_002819 ENSG00000251562 MALAT1 HCN|LINC00047|MALAT-1|NCRNA00047|NEAT2|PRO2853|mascRNA metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) ncRNA 0.000000 0.428571 561_WT_peak_4069 chr2 54342418 54343083 + 305 NA 5' UTR (NM_138448, exon 1 of 4) 5' UTR (NM_138448, exon 1 of 4) 340 NM_138448 98 Hs.516173 NM_138448 HPRD:00028 ACYP2 ACYM|ACYP acylphosphatase 2, muscle type protein-coding 0.075188 0.609610 352(GGAGGAAGGGGA,-,0.00) 9(AGAGGCCT,-,0.00),33(AGCGGCCT,-,0.00) 452(CGGGGAGGGAGG,-,0.00) 243(TCGCCGCC,+,0.00) 351(GGGAGGAAGGGG,+,0.00) 100(TTCCGACG,-,0.00) 274(CAAATCCG,+,0.00) 401(TTTTCCCG,-,0.00) 260(ACCGCCCA,+,0.00) 73(CCCAGGCCCCGC,-,0.00) 248(GCCGCCATGTCT,+,0.00) 71(CTCCCAGGCCCC,-,0.00) 561_WT_peak_4145 chr2 74154009 74154385 + 305 NA intron (NM_080916, intron 1 of 6) CpG 244 NM_080918 1716 Hs.469022 NM_001929 HPRD:03273 DGUOK MTDPS3|dGK deoxyguanosine kinase protein-coding 0.074468 0.628647 10(AGGGCCGGAAAG,+,0.00),77(GGGCCCGGAATG,+,0.00),185(GATATCGGGCCT,-,0.00) -48(AGAGGCCT,-,0.00),19(AAGCGGCT,+,0.00) -107(GGCTTCGA,-,0.00) 10(AGGGCCGGAA,-,0.00) -132(GCCGCGGG,+,0.00) 121(GGGCTGCGAGGA,-,0.00) -27(GGGCCCCGAAGG,+,0.00) -36(GCGGGGCGCGGG,+,0.00),-30(CGCGGGCCCCGA,-,0.00) 42(CCGCCACG,-,0.00) 24(GCTGCCAAGC,+,0.00) 561_WT_peak_773 chr1 228752638 228752920 + 305 NA Intergenic CpG -27615 NR_037962 58480 Hs.647774 NM_021205 HPRD:06965 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding 0.074468 0.618375 89(GCCCGGCCCG,+,0.00) 88(AGCCCGGCCC,-,0.00) 64(GGCGCCTGGCTG,+,0.00),91(CCGGCCCGGCCG,+,0.00) 561_WT_peak_6152 chr6 26198299 26200319 + 305 NA promoter-TSS (NM_003522) promoter-TSS (NM_003522) 212 NM_003530 8351 Hs.532144 NM_003530 HPRD:11905 HIST1H3D H3/b|H3FB histone cluster 1, H3d protein-coding 0.046535 0.475012 937(GAGTCCGGCCCG,-,0.00) 66(AAGTCTCT,+,0.00) 864(GCGCGCCGGCCC,+,0.00) 914(TGTACGCG,-,0.00),996(CGCGTCCG,+,0.00),1440(CGTGTACG,+,0.00),1617(CGTACGCC,-,0.00) 880(TCGCTCGG,-,0.00) 841(CAACACCG,+,0.00) 709(TTTACCCA,-,0.00) 384(ACCGCGCC,+,0.00) 867(CGCCGGCCCCGA,-,0.00),901(GCGGAGCAAGCG,+,0.00) 685(AACACCGCCC,-,0.00),795(GGGCGGCGTT,+,0.00),916(TACGCGGCCC,-,0.00) 875(CCGACTCG,-,0.00),946(CCGCGAAG,-,0.00) 561_WT_peak_5218 chr3 119181951 119183032 + 304 NA promoter-TSS (NM_018266) promoter-TSS (NM_018266) 38 NR_073506 55254 Hs.594171 NM_018266 HPRD:07713 TMEM39A - transmembrane protein 39A protein-coding 0.049029 0.548983 415(GTCCCCGGAATC,+,0.00) 552(TAGCGGCT,+,0.00) 85(CCGGTGGGGCGG,-,0.00) 495(TCCCGCCCCT,+,0.00) 198(CCCCCGCC,-,0.00) 430(CGGCACGA,-,0.00) 497(CCGCCCCTTCCG,-,0.00) 259(CTCCGACG,-,0.00) 701(GGGAGCCCAAGT,+,0.00) 458(TGCGCAGT,-,0.00) 338(CGCGGAGCTGAG,+,0.00) 91(GGGCGGGGTC,+,0.00) 201(CCGCCTAG,-,0.00) 191(CAGGCAGCCCCC,-,0.00) 561_WT_peak_5659 chr5 10015 11788 + 303 NA Intergenic (CCCTAA)n|Simple_repeat|Simple_repeat -129472 NM_052909 153478 Hs.535800 NM_052909 PLEKHG4B - pleckstrin homology domain containing, family G (with RhoGef domain) member 4B protein-coding 0.000000 0.499436 561_WT_peak_5377 chr3 197517968 197518762 + 303 NA exon (NM_032773, exon 1 of 19) exon (NM_032773, exon 1 of 19) 220 NM_032773 84859 Hs.518414 NM_032773 HPRD:14308 LRCH3 - leucine-rich repeats and calponin homology (CH) domain containing 3 protein-coding 0.104534 0.704403 430(CCCTCCGGGCCT,-,0.00),497(GGGGCCGGAGTG,+,0.00),579(CGCCCCGGTTTC,+,0.00) 20(GGCGGCCGCG,+,0.00),50(GGCTGCCGAG,+,0.00) 340(CGGGGGAGGCGG,-,0.00),427(CAGCCCTCCGGG,+,0.00),489(CGGGGAAGGGGG,-,0.00) 421(CGGCGCCAGCCC,+,0.00) 379(CGTAGGCG,-,0.00) -69(TCGGTCCG,-,0.00) -137(GGCGGGGG,+,0.00),-114(GCCGGGGG,+,0.00),24(GCCGCGGG,+,0.00),288(GGCGGGGG,+,0.00),338(GCCGGGGG,+,0.00) 373(TCGTCCCG,+,0.00) 408(GGGGAGAAGCCG,+,0.00),460(GGGGAGAGGCGG,+,0.00) 73(TAGCGTCG,-,0.00) 307(CGTCGGAG,+,0.00) 131(TGGTTTTG,-,0.00),603(CGGATTTG,-,0.00) 231(TTTCCCCG,-,0.00),400(CGGGTAAC,+,0.00) 611(GGGTGCCGAATG,+,0.00) -29(GCCGCGCA,+,0.00) 284(GCGGGGCGGGGG,+,0.00),570(CCCTTGCCCCGC,-,0.00) 148(CGTGGAGCCGCT,+,0.00) 329(GCCGCCCCGGCC,+,0.00) 561_WT_peak_2322 chr14 90797872 90798393 + 303 NA intron (NM_017970, intron 1 of 13) intron (NM_017970, intron 1 of 13) 349 NM_017970 55051 Hs.528131 NM_017970 HPRD:12625 NRDE2 C14orf102 NRDE-2, necessary for RNA interference, domain containing protein-coding 0.055662 0.580460 -29(AGGCCTCT,+,0.00) 287(CGTCGCGG,+,0.00) 18(GCTTTGCAGC,-,0.00) 561_WT_peak_3175 chr17 39845101 39846244 + 303 NA intron (NM_005801, intron 1 of 3) CpG 545 NM_005801 10209 Hs.150580 NM_005801 EIF1 A121|EIF-1|EIF1A|ISO1|SUI1 eukaryotic translation initiation factor 1 protein-coding 0.074366 0.618007 100(CCTTCCGGGCCC,-,0.00),106(GGGCCCGGAGAC,+,0.00),271(GGGCCCGGCGTC,+,0.00) 546(CAGGGAGGGCGG,-,0.00) 400(CGGTGCCAGCCC,+,0.00) 559(AGGCCCGGGC,-,0.00) 850(CGGCAGGA,-,0.00) 238(CGGAAGGAGCAG,+,0.00),329(CCGCCCCTCCCG,-,0.00) 218(GGTCGGAC,+,0.00) -28(CGCCGCCGCCGC,-,0.00),269(GCGGGCCCGGCG,+,0.00),399(GCGGTGCCAGCC,+,0.00) 455(CCGCCTCG,-,0.00) 91(GCAGCGGGGC,+,0.00),506(GCCTGGCAGC,-,0.00) 561_WT_peak_3124 chr17 33541167 33541549 + 301 NA Intergenic HAL1|LINE|L1 -19946 NM_152462 146861 Hs.514814 NM_152462 HPRD:12450 SLC35G3 AMAC1|TMEM21A solute carrier family 35, member G3 protein-coding 0.007853 0.389034 561_WT_peak_835 chr1 249167995 249168713 + 300 NA Intergenic Intergenic -15039 NM_001193328 55657 Hs.377705 NM_017865 HPRD:07922 ZNF692 AREBP|Zfp692 zinc finger protein 692 protein-coding 0.045961 0.492350 331(CGGCCCGGGTTC,+,0.00) 362(AAGCCGTT,+,0.00),363(AGCCGTTT,-,0.00) 161(AGGGGAGGGA,-,0.00) 121(CGGTTTTC,-,0.00),200(GAAAACCG,+,0.00) 45(TTTTCCCG,-,0.00) 561_WT_peak_6277 chr6 31588407 31588951 + 300 NA intron (NM_080686, intron 1 of 30).3 CpG 229 NM_080686 7916 Hs.123239 NM_004638 HPRD:00807 PRRC2A BAT2|D6S51|D6S51E|G2 proline-rich coiled-coil 2A protein-coding 0.099265 0.719266 -17(CCGCCATCCTCC,+,0.00) 202(GCTGCCGGGCCT,-,0.00) -7(CCCCCGCC,-,0.00),154(GCCGGGGG,+,0.00) -45(CGGGAGGAGCCG,+,0.00) 48(CCCGCGCA,+,0.00) -110(CCGGGGGCGGCG,+,0.00),132(GCGGCGGCGGCG,+,0.00),135(GCGGCGGCGGCG,+,0.00) 561_WT_peak_2734 chr16 22309558 22310053 + 298 NA intron (NM_001258035, intron 1 of 19) MIR|SINE|MIR 1109 NM_001258035 55718 Hs.460298 NM_018119 HPRD:15155 POLR3E RPC5|SIN polymerase (RNA) III (DNA directed) polypeptide E (80kD) protein-coding 0.030303 0.461694 -41(CGCTTACG,+,0.00) 173(CAGTTTTG,-,0.00),228(GAAAACCG,+,0.00) -47(ATTACCCG,-,0.00) 561_WT_peak_5512 chr4 78783266 78784210 + 297 NA promoter-TSS (NM_020236) promoter-TSS (NM_020236) -67 NM_020236 65008 Hs.532019 NM_020236 ENSG00000169288 MRPL1 BM022|L1MT|MRP-L1 mitochondrial ribosomal protein L1 protein-coding 0.037076 0.445503 704(TCGTGCTG,+,0.00) 102(TAGCGGCG,-,0.00) -156(CTGTTTTG,-,0.00) -12(GGGGTAAA,+,0.00),332(TTTTCCCG,-,0.00) 184(GGTTCCTGTTTT,-,0.00) 414(CCGCCACG,-,0.00) 569(CAACATGGCGGC,-,0.00) 561_WT_peak_3325 chr17 66287699 66288572 + 297 NA promoter-TSS (NM_001174166) promoter-TSS (NM_001174166) 499 NM_001267727 22901 Hs.437249 NM_014960 ARSG - arylsulfatase G protein-coding 0.116838 0.710526 652(AAGCGGAT,+,0.00) 83(GCGCCTTCCCGG,+,0.00) 533(GGCGTCGG,-,0.00) -123(CCCCCGCC,-,0.00) 425(CGGCAGCAGCGG,+,0.00) 141(TAGCGGCG,-,0.00) 21(GCATCCTGTCTC,-,0.00) 102(ACCGCCCA,+,0.00) -128(GGCCGCCCCCGC,-,0.00),210(CGCCCGCCCCGG,-,0.00),262(GCGGCGCCTGAG,+,0.00),501(CCGGGGCGCGCG,+,0.00) 58(CGCGGGTCCCCG,-,0.00),200(GGCGGCTTCGCG,-,0.00) -149(CCGCGTCG,-,0.00),-146(CGTCGCGG,+,0.00) -134(GGGCCGGGCCGC,-,0.00),379(GCGGCCGGGCCG,+,0.00),380(CGGCCGGGCCGC,-,0.00),473(GCAGCCGGGCTG,+,0.00) 561_WT_peak_7474 chr9 136215006 136215433 + 297 NA promoter-TSS (NM_133640) promoter-TSS (NM_133640) 150 NM_000972 6130 Hs.499839 NM_000972 HPRD:01712 RPL7A L7A|SURF3|TRUP ribosomal protein L7a protein-coding 0.077283 0.642523 -14(CCATCCTCCTCC,+,0.00) 131(GGCGGCCGAG,+,0.00) 218(TAGCGTCT,+,0.00),250(AGAGGCCT,-,0.00) -160(CCGTGCCG,+,0.00) -81(GCCGCCCA,+,0.00),-1(GGCGCGGC,-,0.00) 240(GGGCCGCTCC,+,0.00) 561_WT_peak_3056 chr17 17494832 17495366 + 296 NA promoter-TSS (NM_148172) promoter-TSS (NM_148172) -82 NM_001267551 10400 Hs.714193 NM_007169 HPRD:03862 PEMT PEAMT|PEMPT|PEMT2|PNMT phosphatidylethanolamine N-methyltransferase protein-coding 0.091760 0.657944 40(GCGCTTTCCCGG,+,0.00),227(CCGGCCTCCCGC,+,0.00) 291(TCCCTGCCCT,+,0.00) 325(GCCGGGGG,+,0.00),332(GCCGCGGG,+,0.00) 341(CGTAGCTA,+,0.00) 18(CGGGTAAG,+,0.00) -87(ACCTCGGCTCCC,-,0.00) 359(CCCGCGCA,+,0.00) -30(CGCGGGCCCCGC,-,0.00) 37(GGGGCGCTTT,+,0.00) 99(CCGCGAAG,-,0.00) -126(CCTCCGCAGC,-,0.00),-25(GCCCCGCTGC,-,0.00) 561_WT_peak_1179 chr11 450098 450400 + 296 NA promoter-TSS (NM_030783) promoter-TSS (NM_030783) -31 NM_030783 81490 Hs.731700 NM_030783 HPRD:17927 PTDSS2 PSS2 phosphatidylserine synthase 2 protein-coding 0.115894 0.702970 -29(CGTCGGAC,+,0.00) 41(GGCCGGCCCCGC,-,0.00) -35(CCGCGACG,-,0.00) -61(CCTTCCCAGC,-,0.00),91(CCTTCCCAGC,-,0.00) 561_WT_peak_3317 chr17 65713770 65714297 + 296 NA promoter-TSS (NM_015462) promoter-TSS (NM_015462) -28 NM_015462 25926 Hs.463936 NM_015462 HPRD:10900 NOL11 - nucleolar protein 11 protein-coding 0.079696 0.609848 204(GGAGCAGAGCGA,-,0.00) -162(AGCCGATT,-,0.00) 199(GGCGTGGA,-,0.00) 174(GAGCGCCGGGCC,+,0.00) 246(CGGCAGGA,-,0.00) -17(TCGCTCCTTCCG,-,0.00) 48(CCCCCTCAGGCC,+,0.00) -65(GTCTGACG,-,0.00) 216(CAAAACAG,+,0.00) 561_WT_peak_2014 chr13 42845584 42846178 + 296 NA promoter-TSS (NM_016248) promoter-TSS (NM_016248) -408 NM_016248 11215 Hs.105105 NM_016248 HPRD:05261 AKAP11 AKAP-11|AKAP220|PPP1R44|PRKA11 A kinase (PRKA) anchor protein 11 protein-coding 0.067340 0.615126 346(CTCGGCCGCG,-,0.00) 102(AAGCCGTT,+,0.00),103(AGCCGTTT,-,0.00) 20(GGGGTCGA,-,0.00),405(GGCGTGGA,-,0.00) 186(AGGCTGAGTGGG,-,0.00) 142(GTCCGCCG,-,0.00) 420(CGGTGTTG,-,0.00) 121(GGACCAGGAAGC,+,0.00) 130(AGCGCGCA,+,0.00),338(TGCGCGGG,-,0.00) 254(GGCTGCTCCGCG,-,0.00) -129(GGGCGGAGCC,+,0.00) 56(TCTGCGGAGC,+,0.00) 561_WT_peak_755 chr1 226250421 226251360 + 296 NA intron (NM_002107, intron 1 of 3) CpG 462 NR_002315 440926 Hs.533624 NR_002315 ENSG00000235655 H3F3AP4 p13 H3 histone, family 3A, pseudogene 4 pseudo 0.082002 0.605319 -83(GGAGAAGGGGGG,-,0.00),163(TCTCCCTCCTCC,+,0.00),166(CCCTCCTCCTCC,+,0.00) -54(CCGCTTCCCCGG,+,0.00),170(CCTCCTCCCCGC,+,0.00) 116(TCGCCGCC,+,0.00),149(GGCGCCGA,-,0.00),324(TCGCCGCC,+,0.00) -97(GAGCTCCAGCCG,+,0.00),283(GGGCCCCAGCCC,+,0.00) 561(CGGCACGT,-,0.00) 219(CCGCCCCTTCCC,-,0.00) -134(CGTCGCTC,+,0.00) 119(CCGCCTCAGCCC,+,0.00) 748(CAAAACCA,+,0.00) -67(TTTCCCCG,-,0.00) 733(GGGACCCGAAGG,+,0.00) -144(GCCGCGCC,+,0.00) 146(CGCGGCGCCGAG,+,0.00),146(CGCGGCGCCGAG,-,0.00),663(CGGGGAGCCGAG,+,0.00) 667(GAGCCGAGTT,+,0.00) 701(CGAGGCGG,+,0.00) -9(GGCCCTGGCGGT,-,0.00) 332(GCTTCGCACC,-,0.00) 561_WT_peak_4489 chr2 232328409 232329276 + 294 NA intron (NM_005381, intron 1 of 13) CpG 363 NM_005381 4691 Hs.79110 NM_005381 NCL C23 nucleolin protein-coding 0.115340 0.671659 -25(CCTTCCGGGGCC,-,0.00) 495(GGCGGCGGAG,+,0.00),559(GGCGGCCGCG,+,0.00) -30(AGCCACCT,-,0.00) 133(CCGCGCTCCCGG,+,0.00),224(CCCCCTCCCCGC,+,0.00),398(CCTCCTCCCCGC,+,0.00) 157(GGAGTCGA,-,0.00),265(TCGCCGCC,+,0.00),664(GGCGACGA,-,0.00) 450(GCGCTCGCGCTC,-,0.00) 172(CTCGTACG,+,0.00),174(CGTACGCG,-,0.00),260(CGCGTTCG,+,0.00) 693(CCGACCAA,+,0.00) 66(TCCCGGCCCA,+,0.00) 405(CCCGCGGC,-,0.00),563(GCCGCGGG,+,0.00) 180(CGTCGCAA,+,0.00),546(AAGCGACG,-,0.00) -100(GGCGCGGC,-,0.00),113(GGCGCGGC,-,0.00) 127(GGCAGGCCGCGC,-,0.00) 407(CGCGGCGCCGCG,+,0.00),407(CGCGGCGCCGCG,-,0.00),681(CGTGACTCCGCG,-,0.00) -121(AACCCCGCCC,-,0.00),113(GGCGCGGCCC,-,0.00) -8(CGTGTCGG,+,0.00),42(CCGACTAG,-,0.00) 553(GGCGATGGCGGC,-,0.00) 125(GTGGCAGGCCGC,-,0.00) 561_WT_peak_2770 chr16 29818646 29819494 + 294 NA exon (NM_002383, exon 2 of 5) exon (NM_002383, exon 2 of 5) 1212 NM_001276276 4150 Hs.23650 NM_002383 HPRD:02999 MAZ PUR1|Pur-1|SAF-1|SAF-2|SAF-3|ZF87|ZNF801|Zif87 MYC-associated zinc finger protein (purine-binding transcription factor) protein-coding 0.086085 0.683157 32(GGGGGAGGGGGA,-,0.00),464(GGCGGAGGGAGG,-,0.00) 353(CTCGGCCGCC,-,0.00) 425(AGGCGGCT,+,0.00),476(AAGCCTCT,+,0.00) 31(CGGGGGAGGGGG,-,0.00),416(CGGGGAGGGAGG,-,0.00) 595(AGGGGAGGGA,-,0.00) 29(GGCGGGGG,+,0.00) -85(AGGCACGA,-,0.00) 39(GGGGAGAGGCGG,+,0.00) 21(GCGGAGCCGGCG,+,0.00),564(GCGGCGGCGGCG,+,0.00),570(GCGGCGGCAGCG,+,0.00) 102(CCGCCTCG,-,0.00),160(CCGCGACG,-,0.00) 57(GCGGCGGCGC,+,0.00) 397(GTGGCCTGGCCG,+,0.00) 561_WT_peak_3929 chr19 58694458 58695057 + 294 NA 5' UTR (NM_016324, exon 1 of 5) 5' UTR (NM_016324, exon 1 of 5) 401 NM_001278734 10782 Hs.83761 NM_016324 HPRD:05682 ZNF274 HFB101|ZF2|ZKSCAN19|ZSCAN51 zinc finger protein 274 protein-coding 0.113523 0.705000 347(TGACCCGGAACC,+,0.00),374(GCTTTCGGGGCG,-,0.00) -35(AGAGGCCT,-,0.00) -82(TCGCCGCC,+,0.00),147(TCGCCGCC,+,0.00) 153(CCGGCCGA,+,0.00),211(TCCGTCGG,-,0.00) 97(GCCGCGGG,+,0.00) -107(GGGCACGA,-,0.00) 155(GGCCGACG,-,0.00),210(GTCCGTCG,-,0.00) 238(CAGAACCG,+,0.00) -80(GCCGCCCA,+,0.00) 379(CGGGGCGCCGCG,+,0.00),379(CGGGGCGCCGCG,-,0.00) 561_WT_peak_6587 chr7 7221796 7222184 + 293 NA promoter-TSS (NM_020156) promoter-TSS (NM_020156) -256 NM_020156 56913 Hs.239666 NM_020156 HPRD:16631 C1GALT1 C1GALT|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 protein-coding 0.064433 0.591260 194(GGCGGCGGAG,+,0.00) 71(CCGACTTCCCAG,+,0.00) 184(GGGCTGGTGCGG,-,0.00) -46(TCGTCCCG,+,0.00) 157(CCGCCCCTCCCG,-,0.00) 165(CCCGCTCCGCCC,+,0.00) -156(CGGGTTAA,+,0.00) 561_WT_peak_4592 chr20 26189838 26190244 + 293 NA promoter-TSS (NR_040095) promoter-TSS (NR_040095) -172 NR_040095 284801 Hs.370699 NR_040095 ENSG00000227195 MIR663AHG - MIR663A host gene (non-protein coding) ncRNA 0.133005 0.754300 49(GGAGGAGGGGGC,-,0.00) 174(CCGGGAGGGCAG,-,0.00) 39(GGCGCCGA,-,0.00) -156(CGCACGCG,-,0.00) 43(CCGACCGG,+,0.00) 183(CAGCACGA,-,0.00) -73(CGCCGGAC,+,0.00) -15(CCGCCTCG,-,0.00) 217(GCTGCGGAGG,+,0.00) 561_WT_peak_5849 chr5 90676217 90676540 + 293 NA non-coding (NR_027435, exon 1 of 3) non-coding (NR_027435, exon 1 of 3) 214 NR_027435 100129716 Hs.116364 NR_027435 ARRDC3-AS1 - ARRDC3 antisense RNA 1 ncRNA 0.046440 0.580247 -61(CCCCCCTCCCCC,+,0.00) -118(GGGCCCGAAGGC,+,0.00) -69(TCGAAGCC,+,0.00) -123(GGCGGGGG,+,0.00) -138(GGGTGGCGAAGG,+,0.00),-119(GGGGCCCGAAGG,+,0.00) 561_WT_peak_5713 chr5 41925091 41925864 + 292 NA exon (NM_012176, exon 1 of 7) exon (NM_012176, exon 1 of 7) 121 NM_033484 26272 Hs.165575 NM_012176 HPRD:09949 FBXO4 FBX4 F-box protein 4 protein-coding 0.086675 0.684755 303(GGAGGAGGTGGA,-,0.00) 514(AAGCGTCT,+,0.00) 190(TCGCCGCC,+,0.00),523(GGCGTGGA,-,0.00) 80(CGGCTGGCGCGG,-,0.00) -45(CGTACTCG,-,0.00),287(CGCGTACG,+,0.00) 43(CGGGAGAAGCGG,+,0.00) 351(CGTCGGCC,+,0.00) 93(GCTGCGCA,+,0.00),171(GCCGCGCA,+,0.00) 191(CGCCGCCGCCGC,-,0.00),358(CGCAGGCCGCGG,-,0.00),376(GTGGGGCCGGCC,+,0.00),417(CCGGGGCCTGGG,+,0.00) 87(CGCGGAGCTGCG,+,0.00) 492(CCGAGAAG,-,0.00) 153(AGCCATGGCGGG,-,0.00) 171(GCCGCGCAGC,-,0.00),538(GCTCCGCAGG,-,0.00) 561_WT_peak_104 chr1 24286241 24286755 + 292 NA intron (NM_017761, intron 1 of 2) CpG 197 NM_017761 55629 Hs.7862 NM_017761 HPRD:17871 PNRC2 - proline-rich nuclear receptor coactivator 2 protein-coding 0.103113 0.638835 89(TAGCGGCT,+,0.00) 178(CCGGGCGGGCGC,-,0.00) 31(GGCTTCGA,-,0.00),35(TCGACGTC,+,0.00),37(GACGTCGA,-,0.00),268(GGCGTCGG,-,0.00) 180(GGGCGGGCGCGG,-,0.00) -6(TCGGTCCG,-,0.00) -126(TCCCGGCCCT,+,0.00) 270(CGTCGGAG,+,0.00) 170(CGGGTAAC,+,0.00) 222(CCTGCGGCTCCG,-,0.00) 105(GGCGCGGC,-,0.00) -135(CGCGGAGCCTCC,+,0.00),207(CGCAGCGCCGCG,+,0.00),207(CGCAGCGCCGCG,-,0.00) -137(GCCGCGGAGC,+,0.00) 561_WT_peak_2280 chr14 73524718 73525351 + 292 NA promoter-TSS (NM_021239) promoter-TSS (NM_021239) -187 NM_021239 58517 Hs.531106 NM_021239 HPRD:15229 RBM25 NET52|RED120|RNPC7|S164|Snu71|fSAP94 RNA binding motif protein 25 protein-coding 0.067930 0.522082 -122(AGCCACCT,-,0.00),91(AAGCCTCT,+,0.00) 316(CCGCGCTCCCCG,+,0.00),323(CCCCGCCCCCGG,+,0.00) 164(TCAGTCGG,-,0.00) 328(CCCCCGGC,-,0.00) 107(TCGCGCCG,+,0.00) 441(GAGCGACG,-,0.00) 376(GCCGCGCA,+,0.00) 252(CGTCTCGG,+,0.00) 376(GCCGCGCAGC,-,0.00) 561_WT_peak_5179 chr3 101362716 101363022 + 291 NA Intergenic MER41B|LTR|ERV1 -32405 NR_024407 100009676 Hs.743292 NR_024407 ENSG00000256628 ZBTB11-AS1 - ZBTB11 antisense RNA 1 ncRNA 0.000000 0.426710 -119(AGGGTAAA,+,0.00),-1(TGGGTAAA,+,0.00) 561_WT_peak_361 chr1 110026577 110026883 + 291 NA intron (NM_153340, intron 1 of 10) CpG 169 NM_153340 127002 Hs.118248 NM_153340 HPRD:12506 ATXN7L2 - ataxin 7-like 2 protein-coding 0.117647 0.726384 14(CCTTCCGGGCCC,-,0.00),131(GCCTCCGGGTCC,-,0.00) 11(CCCCCTTCCGGG,+,0.00),63(CCGGCTCCCCGG,+,0.00) -85(GAGCTGGAGCTC,-,0.00) -51(CCCGCGGC,-,0.00),23(CCCCCGCC,-,0.00) 60(CGTCCGGCTCCC,-,0.00) 69(CCCCGGCCCCCC,-,0.00) 128(CGCGCCTCCGGG,-,0.00) -97(CTTCGCGG,+,0.00) 561_WT_peak_1932 chr12 133464281 133464762 + 290 NA promoter-TSS (NM_001161347) promoter-TSS (NM_001161347) 93 NR_110919 101928530 Hs.560003 NR_110919 ENSG00000236617 LOC101928530 - uncharacterized LOC101928530 ncRNA 0.089397 0.618257 -69(AAGTGGCT,+,0.00) -89(TCGTCGCC,+,0.00),-57(TCGGCGCC,+,0.00) -61(GCGGTCGG,-,0.00) 96(CGGGTACA,+,0.00) 147(GGCGCGGT,-,0.00) -164(AGCGGAGCCGGG,+,0.00),191(CGCGGGGCCACG,+,0.00) 561_WT_peak_6426 chr6 108616067 108616706 + 290 NA exon (NM_145315, exon 1 of 13) exon (NM_145315, exon 1 of 13) 288 NM_145315 246269 Hs.259666 NM_145315 HPRD:11223 LACE1 AFG1 lactation elevated 1 protein-coding 0.048513 0.582812 136(CTGGGCCGCC,-,0.00) -97(ATGTGGCT,+,0.00),241(AAGCCTCT,+,0.00),278(AGGTGTCT,+,0.00) 138(GGGCCGCCGCTC,-,0.00) 36(CTCGTACG,+,0.00) 104(CCGCTGAGAGGG,-,0.00) 129(GCGGGGCCTGGG,+,0.00) 561_WT_peak_4659 chr20 46130481 46130825 + 290 NA promoter-TSS (NM_001174087) promoter-TSS (NM_001174087) 52 NM_001174088 8202 Hs.592142 NM_006534 HPRD:03570 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding 0.113372 0.704348 -146(ACGCCCTCCGCC,+,0.00) 146(GGCGGGCGAG,+,0.00) -153(CGTCGCCA,+,0.00),11(CAGCGACG,-,0.00) 61(GGGCTGAGCGGC,-,0.00) -96(GCCGCGCA,+,0.00) -101(GGCCGGCCGCGC,-,0.00) 167(CGAGGCGG,+,0.00) 5(GCTCCACAGC,-,0.00) 561_WT_peak_7361 chr9 98637762 98638419 + 290 NA non-coding (NR_023389, exon 1 of 3) non-coding (NR_023389, exon 1 of 3) 169 NR_023389 100128782 Hs.494549 NR_023389 ENSG00000175611 LINC00476 C9orf130|NAG11 long intergenic non-protein coding RNA 476 ncRNA 0.094368 0.651976 232(TCCCCCTCCTCC,+,0.00) 100(GGCGGCGGAG,+,0.00),163(CTCTGCCGCC,-,0.00),339(CTCCGCCGCC,-,0.00) -156(AGCGACCT,-,0.00),211(TAGTCGCT,+,0.00),324(AGCCACCT,-,0.00),469(AGAGGCCT,-,0.00) 69(TCGCCTTGCCGG,+,0.00),344(CCGCCTTCCGGG,+,0.00) 404(TCGGCGCC,+,0.00) -163(CCCACCGA,+,0.00),-159(CCGAGCGA,+,0.00),400(TCCGTCGG,-,0.00) 212(AGTCGCTA,+,0.00) -104(GGCCTCAGAGGG,-,0.00) 5(CAAGACCG,+,0.00) 104(GCGGAGCCCGAG,+,0.00) 371(GGCTCGGCCC,-,0.00) 303(GCCGCCATTGGC,+,0.00) 101(GCGGCGGAGC,+,0.00) 561_WT_peak_1421 chr11 77597511 77597773 + 289 NA intron (NM_033547, intron 21 of 22) LSU-rRNA_Hsa|rRNA|rRNA 65434 NM_024684 28971 Hs.745040 NM_024684 HPRD:17924 AAMDC C11orf67|CK067 adipogenesis associated, Mth938 domain containing protein-coding 0.030534 0.486692 -55(TAGTGACG,-,0.00) -116(CGGGTAAA,+,0.00) 25(CTTGGCGG,+,0.00) 561_WT_peak_115 chr1 25573649 25574002 + 289 NA 5' UTR (NM_020317, exon 1 of 5) 5' UTR (NM_020317, exon 1 of 5) 160 NM_020317 57035 Hs.259412 NM_020317 HPRD:14835 RSRP1 C1orf63|DJ465N24.2.1|NPD014 arginine/serine-rich protein 1 protein-coding 0.101983 0.618644 32(AGACGCCT,-,0.00) -146(TCGGCGCC,+,0.00),-8(GCCGTCGA,-,0.00),-4(TCGACGCC,+,0.00) -79(TCCCGTCCCT,+,0.00) 176(CCCCCGGC,-,0.00) -88(CGGCACGT,-,0.00) -97(CGCGGGGCCCGG,-,0.00),-96(GCGGGGCCCGGC,+,0.00) 561_WT_peak_4377 chr2 178077433 178078226 + 289 NA TTS (NR_039646) TTS (NR_039646) 375 NR_039646 100616394 NR_039646 miRBase:MI0016787 MIR4444-1 MIR4444|hsa-mir-4444-1 microRNA 4444-1 ncRNA 0.113493 0.695214 170(TCGCCCGCCTCG,+,0.00),491(GGAAGAGGGCGG,-,0.00) 169(CTCGCCCGCC,-,0.00),457(CTCTGCCGCC,-,0.00) 67(GCGGGGAGGCCG,-,0.00),68(CGGGGAGGCCGG,-,0.00),465(CCGGGAAAGCGA,-,0.00) -16(TCGCCGCC,+,0.00),531(GGCCTCGA,-,0.00) 58(TCGGTGGG,-,0.00),224(TTGGTCGG,-,0.00) -11(GCCGGGGG,+,0.00) -130(CCGCCTCTTCCT,-,0.00) -62(TAAAACCG,+,0.00) 188(CCTTCGGCTGCA,-,0.00) 216(GGCGCGGC,-,0.00),264(TGCGCGGC,-,0.00) -138(GACTGGCCCCGC,-,0.00),-21(CGCCGTCGCCGC,-,0.00),298(GGCGGGCCCCGG,-,0.00) 174(CCGCCTCG,-,0.00),449(CCGCCTCG,-,0.00) 290(GGCGGCATGGCG,+,0.00),292(CGGCATGGCGGG,-,0.00),436(CCCGCAATGGCC,+,0.00) 262(GCTGCGCGGC,+,0.00) 251(CCGGCCTGCCGG,+,0.00),505(GCGGCCCGGCAG,+,0.00) 561_WT_peak_3169 chr17 38296733 38297194 + 289 NA exon (NM_007359, exon 1 of 14) exon (NM_007359, exon 1 of 14) 456 NM_007359 22794 Hs.743287 NM_007359 HPRD:16225 CASC3 BTZ|MLN51 cancer susceptibility candidate 3 protein-coding 0.112798 0.673160 58(CGCGGAGGCCGA,-,0.00) -91(CGGACCGGCGGC,+,0.00),19(AGCGCCGGAGGC,+,0.00) -6(GCGGGGAGGCGG,-,0.00),183(CCGGGGGCGGGG,-,0.00) 170(GGCGGCGA,-,0.00) 182(GCCGGGGG,+,0.00) 18(TAGCGCCG,-,0.00) -141(GGCGCGGT,-,0.00) -84(GCGGCGGCAGCG,+,0.00),29(GCGGCGGCAGCG,+,0.00) -20(GGCGGCTCCCCG,-,0.00) -164(GCCTCCCAGC,-,0.00) 561_WT_peak_4144 chr2 73511795 73512259 + 287 NA Intergenic CpG 8802 NM_001965 1961 Hs.3052 NM_001965 HPRD:00550 EGR4 NGFI-C|NGFIC|PAT133 early growth response 4 protein-coding 0.064655 0.651613 52(AGCGGCCT,-,0.00),214(AGCCGCCT,-,0.00) -136(TCCCCGCCCT,+,0.00) -83(GCCTCTCCGCCC,+,0.00) -30(CAAATCCG,+,0.00) -150(ACCGCCCA,+,0.00) 216(CCGCCTAG,-,0.00) -134(CCCGCCCTGGGC,+,0.00) 561_WT_peak_7637 chrY 1531833 1532176 + 287 NA 3' UTR (NM_178129, exon 2 of 2).2 3' UTR (NM_178129, exon 2 of 2).2 -9349 NM_001173473 8623 Hs.533514 NM_004192 HPRD:02156 ASMTL ASMTLX|ASMTLY|ASTML acetylserotonin O-methyltransferase-like protein-coding 0.037901 0.479651 -154(AAGTGGCT,+,0.00) -114(TCGACGCA,+,0.00) 561_WT_peak_3724 chr19 35168284 35169191 + 287 NA non-coding (NR_110322, exon 1 of 3) non-coding (NR_110322, exon 1 of 3) 193 NM_001289184 55900 Hs.436350 NM_018443 HPRD:15765 ZNF302 HSD16|MST154|MSTP154|ZNF135L|ZNF140L|ZNF327 zinc finger protein 302 protein-coding 0.095921 0.601322 636(CCGCCCGCCTCC,+,0.00),639(CCCGCCTCCGCC,+,0.00) 212(GTCGGCCGCC,-,0.00) -55(TCGACGGC,+,0.00),436(GGCGCCGA,-,0.00) -7(CCCGCGGC,-,0.00) 714(CGTCTCTA,+,0.00) -26(CAAAGCCG,+,0.00),185(CGGTTTGG,-,0.00),580(CAGTTTTG,-,0.00) -11(TTTGCCCG,-,0.00),222(GTTACCCG,-,0.00),414(CGTGTAAA,+,0.00) 9(TCCGCGCA,+,0.00),120(TGGGCGGT,-,0.00) 327(GCGGCGACGGCG,+,0.00),348(CCCTGGGTCCGC,-,0.00) 11(CGCGCAGCCGCA,+,0.00),257(CGCGGAGGCGCG,+,0.00) 238(CTACGCGG,+,0.00) 561_WT_peak_208 chr1 45097183 45098053 + 287 NA intron (NM_018150, intron 5 of 14) CpG 42662 NM_024587 79639 Hs.22157 NM_024587 HPRD:07989 TMEM53 NET4 transmembrane protein 53 protein-coding 0.097701 0.690011 407(AGCGCCGGAGGC,+,0.00) 389(GGCGGCCGTG,+,0.00) 122(AGCCGCTA,-,0.00) 520(GCGGGAGGGAGG,-,0.00) 370(TCGCCGCC,+,0.00) 421(GGGCTGGGGCGG,-,0.00) 677(CGAGTACG,+,0.00) 571(TTGGTCGG,-,0.00) 55(GCCGGGCG,+,0.00),235(CCCCCGCC,-,0.00),385(GCCGGGCG,+,0.00),468(CGCCCGGC,-,0.00),593(GGCGGGGG,+,0.00) 434(ACCGCGCA,+,0.00),613(GCCGCGCC,+,0.00) 230(GGCCGCCCCCGC,-,0.00),307(CGCCGCCGCCGC,-,0.00),511(GAGGGGCCGGCG,+,0.00) 428(GGCGGCACCGCG,-,0.00) 357(GAATCCGCCC,-,0.00) 372(GCCGCCCTCGCC,+,0.00) 77(GCCCCGCAGC,-,0.00),115(ACTTCGCAGC,-,0.00),367(GCATCGCCGC,-,0.00) 561_WT_peak_7183 chr8 144897878 144898185 + 287 NA promoter-TSS (NM_015356) promoter-TSS (NM_015356) -482 NM_182706 23513 Hs.436329 NM_015356 HPRD:06984 SCRIB CRIB1|SCRB1|SCRIB1|Vartul scribbled planar cell polarity protein protein-coding 0.149837 0.762987 55(GCGCCCTCCGCC,+,0.00) -104(GAGTCCGGCCCT,-,0.00),0(GAAGCCGGGCCC,-,0.00) -134(CCCGGCCGCC,-,0.00) -4(CCGGGAAGCCGG,-,0.00),127(CCTCCTCCCGGG,+,0.00) -93(TCGCCGCC,+,0.00) 93(CCCGCGGC,-,0.00) -9(GCGTGCCG,+,0.00) -159(CGCCGGAC,+,0.00) -127(GCCGCGCA,+,0.00),-19(ACCGCGCA,+,0.00) 2(AGCCGGGCCCGC,-,0.00),7(GGCCCGCCCCGC,-,0.00),86(CCCTGGCCCCGC,-,0.00) -25(AGCGGCACCGCG,-,0.00) 78(AGCCCGGCCC,-,0.00) -90(CCGCCTAG,-,0.00) -127(GCCGCGCAGC,-,0.00),-49(GCGCCGCCGC,-,0.00),-5(GCCGGGAAGC,+,0.00),91(GCCCCGCGGC,-,0.00) 77(CAGCCCGGCCCC,-,0.00) 561_WT_peak_3152 chr17 37309871 37310212 + 287 NA Intergenic tRNA-Cys-TGY|tRNA|tRNA -2139 NM_020405 57125 Hs.125036 NM_020405 HPRD:08439 PLXDC1 TEM3|TEM7 plexin domain containing 1 protein-coding 0.043988 0.514620 -89(TCGACACC,+,0.00) 36(CCGACCGC,+,0.00) -38(CGGATTTG,-,0.00) 65(GCTGCGCA,+,0.00) 561_WT_peak_5946 chr5 138629185 138630363 + 286 NA intron (NM_001194956, intron 1 of 13) CpG 335 NM_001194956 9782 Hs.268939 NM_018834 HPRD:05270 MATR3 ALS21|MPD2|VCPDM matrin 3 protein-coding 0.100170 0.631043 359(GGCGGCGGAG,+,0.00) 299(AGCCGCCT,-,0.00),934(AGCCGCCT,-,0.00) 233(GCGGGGAGCCGG,-,0.00) 552(TCGAGGCC,+,0.00) -43(GGCCTGGCGCGC,-,0.00) 450(CCGGCCGA,+,0.00) 802(TCCCGGCCCA,+,0.00) 486(GGCGGGGG,+,0.00) 494(CGGGACGA,-,0.00) 44(CCGCTTCTCGCC,-,0.00) 526(GCGCTGAGGGGG,-,0.00) 197(GTCCGCCG,-,0.00) 158(CGGGTAAG,+,0.00),739(TTTTCCCG,-,0.00),872(CGCGTAAA,+,0.00) 236(GGGAGCCGGCGG,+,0.00) 36(CGCTGCCGCCGC,-,0.00),515(CGCGGGCCGCGG,-,0.00) 953(CGAGGCGG,+,0.00) 65(GCTGCGGGGG,+,0.00) -45(GGGGCCTGGCGC,+,0.00),513(CACGCGGGCCGC,-,0.00) 561_WT_peak_1210 chr11 10879063 10879979 + 285 NA promoter-TSS (NM_021211) promoter-TSS (NM_021211) 99 NM_001143667 58486 Hs.655066 NM_021211 HPRD:17429 ZBED5 Buster1 zinc finger, BED-type containing 5 protein-coding 0.077511 0.609597 427(CTCTGCCGCC,-,0.00) -51(TCGCGTCCCCGG,+,0.00) 352(CGGCTGGCGCGG,-,0.00) 640(CGCGGACG,+,0.00) 236(GGGGAGAGAGGG,-,0.00) 262(CAAAACAG,+,0.00) -126(TGCGCGCT,-,0.00),357(GGCGCGGT,-,0.00),434(GCCGCCCA,+,0.00),523(GGCGCGGC,-,0.00) 150(CGCTTAGCCGCG,+,0.00),476(CGCTGAGCAGCG,+,0.00) 523(GGCGCGGCCC,-,0.00) 482(GCAGCGGGGC,+,0.00) 58(GCGGCTGGGCTG,+,0.00) 561_WT_peak_24 chr1 2457568 2457825 + 285 NA intron (NM_018216, intron 1 of 18) CpG 339 NM_018216 55229 Hs.26156 NM_018216 HPRD:07313 PANK4 - pantothenate kinase 4 protein-coding 0.136187 0.763566 67(CCGCGCCCCCGC,+,0.00) 72(CCCCCGCC,-,0.00) -146(CGGGTAAC,+,0.00) -23(CCCGCGCA,+,0.00),21(TGCGCGGG,-,0.00) -86(GGCAGGCCCCGC,-,0.00),-64(GCGGCGCCTGCC,+,0.00),60(GCGAGGCCCGCG,+,0.00) 23(CGCGGGCCCGCG,+,0.00),23(CGCGGGCCCGCG,-,0.00) -88(CCGGCAGGCCCC,-,0.00) 561_WT_peak_7050 chr8 70602328 70602569 + 285 NA intron (NM_001146008, intron 5 of 7) LSU-rRNA_Hsa|rRNA|rRNA 142956 NM_001146009 81796 Hs.152460 NM_030958 HPRD:15399 SLCO5A1 OATP-J|OATP-RP4|OATP5A1|OATPRP4|SLC21A15 solute carrier organic anion transporter family, member 5A1 protein-coding 0.033195 0.471074 -23(CGTCACTA,+,0.00) -117(TTTCCCCG,-,0.00),38(TTTACCTG,-,0.00) -103(CCGCCAAG,-,0.00) 561_WT_peak_1785 chr12 89434032 89434534 + 284 NA Intergenic Intergenic -20814 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LOC728084 - uncharacterized LOC728084 ncRNA 0.013944 0.419483 178(AAGTGGTT,+,0.00) 162(GAGAGCCTAAGG,+,0.00) -86(CAGCCAGCCCTC,-,0.00) 561_WT_peak_944 chr10 32667724 32668004 + 284 NA promoter-TSS (NM_001282391) promoter-TSS (NM_001282391) -138 NM_001282391 80314 Hs.167805 NM_025209 HPRD:09941 EPC1 Epl1 enhancer of polycomb homolog 1 (Drosophila) protein-coding 0.021429 0.498221 -113(CCCCCGCC,-,0.00) -158(TGGCTGGGAGGG,-,0.00) -118(CGCTGCCCCCGC,-,0.00) 561_WT_peak_7271 chr9 46843847 46844391 + 283 NA Intergenic Intergenic 80328 NR_046203 643648 Hs.640178 NR_046203 LINC01189 - long intergenic non-protein coding RNA 1189 ncRNA 0.071691 0.627523 283(AGCGGCTT,-,0.00) -32(CGCGTGCG,+,0.00) -100(CGCCCGGC,-,0.00),348(GCCGGGCG,+,0.00) -96(CGGCACGC,-,0.00) 27(TGGTTTTG,-,0.00) -24(CAGGTAAA,+,0.00) -51(TGCGCGGA,-,0.00) 339(GCAGCCCTGGCC,+,0.00) -39(GCTGCGACGC,+,0.00) 561_WT_peak_3492 chr18 43677904 43678290 + 283 NA 5' UTR (NM_001257335, exon 1 of 12) 5' UTR (NM_001257335, exon 1 of 12) 222 NM_001257335 498 Hs.298280 NM_004046 HPRD:01258 ATP5A1 ATP5A|ATP5AL2|ATPM|HEL-S-123m|MC5DN4|MOM2|OMR|ORM|hATP1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle protein-coding 0.085492 0.658915 -20(TCGCCCTCCTGC,+,0.00) 33(CCCGGCCGCC,-,0.00) 114(CGCGCACG,+,0.00) 47(TCATGCCG,+,0.00) 561_WT_peak_906 chr10 21814777 21815173 + 283 NA promoter-TSS (NM_207371) promoter-TSS (NM_207371) -364 NM_207371 387640 Hs.350848 NM_207371 HPRD:16981 SKIDA1 C10orf140|DLN-1 SKI/DACH domain containing 1 protein-coding 0.126263 0.755668 160(CGGGGAGGGCCG,-,0.00) 61(CGCCGCCAGCCC,+,0.00) 38(TCCCGGCTCT,+,0.00),165(AGGGCCGGGC,-,0.00),170(CGGGCCGGGC,-,0.00),208(AGGGGAGGGA,-,0.00) 57(CCCCCGCC,-,0.00),98(CCCCCGCC,-,0.00) 4(TCGTGCCG,+,0.00) 157(GGGCGGGGAGGG,-,0.00),196(GGCCTGCGAGGG,-,0.00) -26(TTTACCCA,-,0.00) 220(GGGAGCCGAGGG,+,0.00) -156(GGCGCGGT,-,0.00),187(ACCGCGCC,+,0.00) -74(CCCTGACCCCGG,-,0.00),-8(CGCGGGCCGCGC,-,0.00),52(CCCCGCCCCCGC,-,0.00),192(GCCGGGCCTGCG,+,0.00) 218(CGGGGAGCCGAG,+,0.00) -5(GGGCCGCGCT,+,0.00) 142(CAGCGAGTCCGC,-,0.00) 561_WT_peak_6973 chr8 33370903 33371458 + 283 NA promoter-TSS (NM_001102401) promoter-TSS (NM_001102401) -477 NM_025115 80185 Hs.77135 NM_025115 HPRD:13390 TTI2 C8orf41|MRT39 TELO2 interacting protein 2 protein-coding 0.046847 0.474820 21(CGTCTGAC,+,0.00) 286(CGGTTTTC,-,0.00) 15(ATTACCCG,-,0.00) 318(CCGAGTAG,-,0.00) 561_WT_peak_2712 chr16 18801237 18801708 + 282 NA intron (NM_001030009, intron 1 of 4) CpG 184 NM_001030009 6210 Hs.370504 NM_001019 HPRD:04723 RPS15A S15a ribosomal protein S15a protein-coding 0.087049 0.671610 134(CCAGCCTCCTCG,+,0.00) 30(CGGACCGGGATC,+,0.00) 180(GGCGCCGA,-,0.00) -46(CGGCCCGA,-,0.00) -17(GGCAGTCGAAGG,+,0.00),-6(GCTCCGGCTCCC,-,0.00) -28(CCGCCTAG,-,0.00) 66(CCAGCCATGGCT,+,0.00) -152(CAGCGCGGCCGC,-,0.00) 561_WT_peak_4136 chr2 70475988 70476317 + 282 NA promoter-TSS (NM_022037) promoter-TSS (NM_022037) -373 NM_022173 7072 Hs.413123 NM_022037 HPRD:04626 TIA1 TIA-1|WDM TIA1 cytotoxic granule-associated RNA binding protein protein-coding 0.048632 0.430303 -12(GAACCCGGGTCG,-,0.00) 55(AGCCGCCA,-,0.00) 561_WT_peak_7542 chrX 48794308 48794599 + 282 NA intron (NM_017602, intron 2 of 8) intron (NM_017602, intron 2 of 8) -18040 NM_006875 11040 Hs.727148 NM_006875 HPRD:02244 PIM2 - Pim-2 proto-oncogene, serine/threonine kinase protein-coding 0.020619 0.592466 -19(AGCGGCAT,-,0.00) -96(GCGGGAAGGGGG,-,0.00) -33(CCCCCGCC,-,0.00) 561_WT_peak_88 chr1 19717564 19718019 + 282 NA intron (NM_001206540, intron 2 of 9) intron (NM_001206540, intron 2 of 9) 79051 NM_001040125 54896 Hs.647620 NM_017765 HPRD:17896 PQLC2 - PQ loop repeat containing 2 protein-coding 0.028571 0.451754 -73(TTGTGCCG,+,0.00) 116(CGGTTTTT,-,0.00) 561_WT_peak_6208 chr6 27655869 27656350 + 282 NA Intergenic Intergenic -5705 NR_038293 100507173 Hs.635987 NR_038292 LINC01012 - long intergenic non-protein coding RNA 1012 ncRNA 0.051975 0.473029 295(CGGGGAAA,+,0.00) 561_WT_peak_4456 chr2 207630067 207630674 + 281 NA promoter-TSS (NM_001039845) promoter-TSS (NM_001039845) -97 NR_104261 130752 Hs.147816 NM_206892 HPRD:14375 MDH1B RP11-95H11 malate dehydrogenase 1B, NAD (soluble) protein-coding 0.046129 0.516447 270(GGCGGCCCAG,+,0.00) 172(TAGCGGCAGCCC,+,0.00) 389(CTGCTTCTTCCA,-,0.00) 131(CGGTCTTG,-,0.00) 268(TGGGCGGC,-,0.00) 90(CTTCTCGG,+,0.00) 271(GCGGCCCAGCTG,+,0.00) 561_WT_peak_1917 chr12 125398699 125399468 + 280 NA intron (NM_021009, intron 1 of 1) CpG 504 NM_021009 7316 Hs.520348 NM_021009 HPRD:07038 UBC HMG20 ubiquitin C protein-coding 0.081925 0.615584 220(CGGCCCGGCGGC,+,0.00) 84(AAGCGTCT,+,0.00),112(AGCCGCCA,-,0.00) -162(GGGCGCGCGCTC,-,0.00),-38(GTGCCCCAGCCC,+,0.00) 211(CCCACCGA,+,0.00) 28(TCTTGCCG,+,0.00) 3(TAGCGAAG,-,0.00) 65(ACCTCACAGCCC,+,0.00) 596(CGTCTGAC,+,0.00),597(GTCTGACG,-,0.00) 32(GCCGCCCA,+,0.00) 542(GGGCCGCTGT,+,0.00) 184(CTTGGCGG,+,0.00),409(CCGAGAAG,-,0.00) 320(GCTGCGACGG,+,0.00) 219(GCGGCCCGGCGG,+,0.00) 561_WT_peak_249 chr1 54518511 54519500 + 280 NA promoter-TSS (NM_153035) promoter-TSS (NM_153035) 106 NM_004872 9528 Hs.523262 NM_004872 HPRD:12731 TMEM59 C1orf8|HSPC001 transmembrane protein 59 protein-coding 0.066734 0.626263 241(TCCTCCTCCTCC,+,0.00) 33(AGGCCCGGTGGC,+,0.00) 658(AAGCGTCT,+,0.00) 174(TCGGCGCC,+,0.00) 482(CGTAGGCG,-,0.00) 275(CCCACCGA,+,0.00),279(CCGACCGT,+,0.00) -46(GGGCTGCAAGGG,-,0.00),265(CCTTCTCCGCCC,+,0.00) 767(CGTCAGAC,+,0.00) 61(CAAGACCG,+,0.00) 171(CCTTCGGCGCCG,-,0.00) -103(GGGCCGATTT,+,0.00),311(AGCTCCGCCC,-,0.00),742(GGGCTGCTTT,+,0.00) 450(CTTCGCGG,+,0.00) 561_WT_peak_4717 chr20 61569007 61569330 + 279 NA promoter-TSS (NM_017896) promoter-TSS (NM_017896) 136 NM_080797 11083 Hs.517172 NM_022105 HPRD:10363 DIDO1 BYE1|C20orf158|DATF-1|DATF1|DIDO2|DIDO3|DIO-1|DIO1|dJ885L7.8 death inducer-obliterator 1 protein-coding 0.111455 0.679012 -102(GGCGGCCGCG,+,0.00) 2(TCGCCATCCCGG,+,0.00) 65(CCGACGCC,+,0.00) -135(CCGGTCGG,-,0.00) -76(CCCCCGCC,-,0.00) 0(CGTCGCCA,+,0.00) 63(GGCCGACG,-,0.00) -24(CCTTCGCCTCCG,-,0.00) 37(CCTCCGCAGC,-,0.00) 561_WT_peak_5708 chr5 40755950 40756297 + 279 NA promoter-TSS (NM_012382) promoter-TSS (NM_012382) -51 NM_012382 23548 Hs.348915 NM_012382 HPRD:17807 TTC33 OSRF tetratricopeptide repeat domain 33 protein-coding 0.092219 0.635057 -39(CGCGGCCGCC,-,0.00) 110(CCGCCCCCGCGG,+,0.00) -155(CGGGTTTG,-,0.00) -113(CGGGCAAA,+,0.00),66(CGGGAAAA,+,0.00) 80(TGCGCGGG,-,0.00),123(ACCGCGCA,+,0.00) 12(CGCGGCTGGGCG,-,0.00),117(CGCGGTACCGCG,+,0.00),117(CGCGGTACCGCG,-,0.00),125(CGCGCAGCCTCG,+,0.00) 561_WT_peak_158 chr1 33115962 33116725 + 278 NA promoter-TSS (NM_178547) promoter-TSS (NM_178547) -158 NM_178547 339487 Hs.655921 NM_178547 ZBTB8OS ARCH|ARCH2 zinc finger and BTB domain containing 8 opposite strand protein-coding 0.069463 0.547120 47(GACTTCGGCCCG,-,0.00),52(CGGCCCGGAGTT,+,0.00),330(AGACCCGAAGGC,+,0.00) -106(AGCCACCT,-,0.00) 474(TCAACGCC,+,0.00) 584(CGCGAACG,+,0.00),586(CGAACGCG,-,0.00) -159(GCCGCGGG,+,0.00),416(GCCGCGGG,+,0.00) 412(TCTTGCCG,+,0.00) 188(CAAAACCC,+,0.00) -155(CGGGTAAG,+,0.00) 530(GCGGAGCGCGCG,+,0.00) 79(GACTCCGCCC,-,0.00) 561_WT_peak_6023 chr5 172571443 172571763 + 278 NA exon (NM_001205, exon 1 of 6) exon (NM_001205, exon 1 of 6) 158 NM_013979 662 Hs.145726 NM_001205 HPRD:04480 BNIP1 NIP1|SEC20|TRG-8 BCL2/adenovirus E1B 19kDa interacting protein 1 protein-coding 0.059375 0.613707 -57(TGGCGGCT,+,0.00) -90(TCCTGCCG,+,0.00) 139(GGCTCCGCCC,-,0.00) -62(CAACATGGCGGC,-,0.00) 561_WT_peak_256 chr1 59249214 59250430 + 278 NA promoter-TSS (NM_002228) promoter-TSS (NM_002228) -37 NM_002228 3725 Hs.696684 NM_002228 HPRD:01302 JUN AP-1|AP1|c-Jun jun proto-oncogene protein-coding 0.074836 0.647494 -10(GTCTCCGGTCCT,-,0.00),859(GGGCCCGAAGTC,+,0.00) -97(CTCCGCCGCC,-,0.00) 968(AGGTGGCT,+,0.00) 611(TCCCCTCCCCGG,+,0.00),634(CGGCCCGCCCGG,+,0.00),942(CCGGGGGGGCGG,-,0.00) 631(TCCCGGCCCG,+,0.00),786(AGGCCAGGGA,-,0.00) 46(CCCCCGGC,-,0.00) 433(CGTCGCTC,+,0.00),681(TAGTGACG,-,0.00) 587(GCCTCTCGGCCC,+,0.00),596(CCCTCTCTTCCC,+,0.00) 628(TTTTCCCG,-,0.00) 168(GGGAGCCACAGG,+,0.00),996(GCGAGCCTAAGG,+,0.00) 285(TCCGCGCA,+,0.00) 494(CTCTGGGCCCGC,-,0.00) 621(GGGCCGTTTT,+,0.00) 302(CCGCCTCG,-,0.00) 304(GCCTCGCTGC,-,0.00),529(GCTCCGCTGC,-,0.00) 245(CCGACCTGGCTG,+,0.00),253(GCTGGCTGGCTG,+,0.00) 561_WT_peak_6169 chr6 26322892 26323293 + 277 NA Intergenic tRNA-Arg-CGA|tRNA|tRNA -37365 NM_003543 8365 Hs.591790 NM_003543 HPRD:11919 HIST1H4H H4/h|H4FH histone cluster 1, H4h protein-coding 0.017456 0.405473 11(AGGCGTCT,+,0.00) 14(CGTCTGAC,+,0.00) 561_WT_peak_609 chr1 168194761 168195478 + 277 NA promoter-TSS (NM_199344) promoter-TSS (NM_199344) -136 NM_199344 375035 Hs.645435 NM_199344 SFT2D2 UNQ512|dJ747L4.C1.2 SFT2 domain containing 2 protein-coding 0.085077 0.665738 441(AGCGGCCT,-,0.00) 185(CCGCGCCCCCCG,+,0.00),489(CCGCGCTCCCGC,+,0.00) 124(TGGACGCC,+,0.00) 513(GCCCGGGCCT,+,0.00) -41(AGGCACGA,-,0.00) 411(GTGCTGAGCGGG,-,0.00) 449(GTCCGAGG,-,0.00),473(CGTCGGCC,+,0.00) 472(CCGTCGGCCCCC,-,0.00) 184(GCCGCGCC,+,0.00),293(TGGGCGGC,-,0.00),301(TGGGCGGC,-,0.00) 269(GCGGGGCGCGCC,+,0.00) 94(AGCGCGGCCC,-,0.00) 387(GCCGCAATGGAC,+,0.00) 358(GCTGAGGAGC,+,0.00) -105(CAGGCACGCCCC,-,0.00),442(GCGGCCTGTCCG,+,0.00) 561_WT_peak_761 chr1 227950289 227950770 + 277 NA intron (NM_053052, intron 3 of 4) intron (NM_053052, intron 3 of 4) -27417 NM_001161465 65094 Hs.555974 NM_023007 HPRD:07774 JMJD4 - jumonji domain containing 4 protein-coding 0.027027 0.558091 8(TCACCCTCCTCA,+,0.00) 60(GCTGGGCCAGGG,+,0.00) 561_WT_peak_5882 chr5 115420506 115420916 + 277 NA promoter-TSS (NM_016144) promoter-TSS (NM_016144) -16 NM_016144 51397 Hs.483136 NM_016144 HPRD:16734 COMMD10 PTD002 COMM domain containing 10 protein-coding 0.100000 0.669100 -41(AGACCCGGAGCC,+,0.00) 17(CGCGGCCGCC,-,0.00) 89(CCCGCGGC,-,0.00) -95(CCCTCTCCGCCC,+,0.00) 11(GTCCGCCG,-,0.00) -16(TGCGCGGC,-,0.00),149(GCCGCGCC,+,0.00) -27(AAAACGGCCC,-,0.00) 21(GCCGCCATTGGC,+,0.00),202(GCCGCCTGGGCG,+,0.00) 561_WT_peak_1436 chr11 82997070 82997607 + 277 NA 5' UTR (NM_021825, exon 1 of 9) 5' UTR (NM_021825, exon 1 of 9) 112 NM_001286117 60492 Hs.368866 NM_021825 HPRD:14378 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding 0.063315 0.587361 279(AAGCCGCT,+,0.00) 150(TGGGTCGG,-,0.00),350(TCAGTCGG,-,0.00) -4(CCGCTTCTCCCA,-,0.00) -68(GTCCCACG,-,0.00) 174(TTTAGCCG,-,0.00) 561_WT_peak_7261 chr9 41954242 41954748 + 276 NA non-coding (NR_015363, exon 2 of 2) non-coding (NR_015363, exon 2 of 2) 581 NR_015363 389741 Hs.380240 NM_203448 GLIDR LINC01172 glioblastoma down-regulated RNA ncRNA 0.061265 0.585799 30(AAGCCGCT,+,0.00),103(AGGCGTCT,+,0.00) 300(CGGGGAAGGCGC,-,0.00) -3(TCGGCGCC,+,0.00) -35(CGCCCGGC,-,0.00) -30(GGCCAGGGCTGC,-,0.00) 561_WT_peak_5963 chr5 140699862 140700387 + 276 NA 5' UTR (NM_005642, exon 1 of 1) 5' UTR (NM_005642, exon 1 of 1) 227 NM_005642 6879 Hs.438838 NM_005642 HPRD:07196 TAF7 TAF2F|TAFII55 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa protein-coding 0.081905 0.587452 -52(GTTTTCGGCCCA,-,0.00) -71(TGGCGGCT,+,0.00),349(AGGCGGCT,+,0.00) 172(TCCTGCCG,+,0.00),240(TCTTGCCG,+,0.00) 330(CGTCGCGA,+,0.00),332(TCGCGACG,-,0.00) -54(CGGTTTTC,-,0.00),313(CAAAAACG,+,0.00) 339(GCGGGGCGGGAG,+,0.00) 335(CGACGCGG,+,0.00) 561_WT_peak_155 chr1 32645122 32645558 + 275 NA promoter-TSS (NM_175852) promoter-TSS (NM_175852) -5 NM_175852 200081 Hs.17987 NM_175852 HPRD:09408 TXLNA IL14|TXLN taxilin alpha protein-coding 0.121560 0.704805 41(GTTTCCGGTGCG,-,0.00) 12(AGGCGGCT,+,0.00) -86(CCGCCCTGCCGG,+,0.00) -89(GCCCCGCCCT,+,0.00),136(CGGGCCGGGA,-,0.00) 188(GCCGGGGG,+,0.00) 72(CATCGGAC,+,0.00) 215(TGCGCGGG,-,0.00) -24(CGCCGGCGCCGG,-,0.00),50(GCGAGGCCAGAG,+,0.00),246(GCGGGGCGTGGG,+,0.00) -42(CCTTCCCAGC,-,0.00),47(GGTGCGAGGC,+,0.00),226(GCCTCGCGGC,-,0.00) 561_WT_peak_3269 chr17 56736135 56736733 + 274 NA intron (NM_198393, intron 1 of 32) intron (NM_198393, intron 1 of 32) 32982 NM_001201457 56155 Hs.390221 NM_031272 ENSG00000121101 TEX14 CT113 testis expressed 14 protein-coding 0.033445 0.432387 350(CCCCCGCC,-,0.00) 123(CAAAACCA,+,0.00) 272(CGGGGAAA,+,0.00) -16(CCGAGTAG,-,0.00) 561_WT_peak_4360 chr2 170550995 170551360 + 274 NA promoter-TSS (NM_001085447) promoter-TSS (NM_001085447) 213 NM_001199286 493911 Hs.745233 NM_001008489 HPRD:17848 PHOSPHO2 - phosphatase, orphan 2 protein-coding 0.095890 0.691257 -118(GGCTGCCGAG,+,0.00) -6(CCCCCGCC,-,0.00) 60(GTCCGATG,-,0.00) 26(TGCGCGCT,-,0.00) 561_WT_peak_5807 chr5 72793955 72794689 + 274 NA promoter-TSS (NM_001207) promoter-TSS (NM_001207) 72 NM_001207 689 Hs.591768 NM_001207 HPRD:03966 BTF3 BETA-NAC|BTF3a|BTF3b|NACB basic transcription factor 3 protein-coding 0.081744 0.658503 536(CCGGGCAGGCCC,-,0.00) 65(CGCGTGCG,+,0.00) 532(CGGGCCGGGC,-,0.00) 377(CGACGGAC,+,0.00) 257(CCGACAAG,-,0.00) 561_WT_peak_3399 chr17 80452464 80452808 + 274 NA Intergenic tRNA-Met-i|tRNA|tRNA -24958 NM_004514 3607 Hs.591140 NM_004514 HPRD:00982 FOXK2 ILF|ILF-1|ILF1 forkhead box K2 protein-coding 0.026163 0.556522 96(GGCGGCGA,-,0.00) 130(GAGGACTGGCTG,+,0.00) 561_WT_peak_1588 chr12 9911878 9912052 + 273 NA intron (NM_001781, intron 1 of 4) intron (NM_001781, intron 1 of 4) 1532 NM_001781 969 Hs.208854 NM_001781 HPRD:00119 CD69 AIM|BL-AC/P26|CLEC2C|EA1|GP32/28|MLR-3 CD69 molecule protein-coding 0.005747 0.354286 561_WT_peak_6266-2 chr6 30584715 30585165 + 273 NA promoter-TSS (NM_014046).4 promoter-TSS (NM_014046).4 144 NM_002714 5514 Hs.106019 NM_002714 HPRD:04797 PPP1R10 CAT53|FB19|PNUTS|PP1R10|R111|p99 protein phosphatase 1, regulatory subunit 10 protein-coding 0.066667 0.512195 10(AACCGCTT,-,0.00) 88(TTTACCCA,-,0.00),170(TATACCCG,-,0.00) 181(GCCGCCCA,+,0.00) 178(GACGCCGCCC,-,0.00) 561_WT_peak_3276 chr17 57697024 57697480 + 273 NA 5' UTR (NM_001288653, exon 1 of 32) 5' UTR (NM_001288653, exon 1 of 32) 202 NM_001288653 1213 Hs.491351 NM_004859 HPRD:00350 CLTC CHC|CHC17|CLH-17|CLTCL2|Hc clathrin, heavy chain (Hc) protein-coding 0.081140 0.660832 -44(CGCCCCGAATTC,+,0.00) 68(AGCCGTTT,-,0.00) 173(CTGCGTCCCCGG,+,0.00) -29(CGCCCGCCGCGC,-,0.00) 30(GGGCGGAGTT,+,0.00) 101(CGCCATTGCGGC,-,0.00) 257(GCCCCGCAGC,-,0.00) 561_WT_peak_6266 chr6 30584155 30584626 + 273 NA non-coding (NR_072994, exon 2 of 20) non-coding (NR_072994, exon 2 of 20) 694 NM_002714 5514 Hs.106019 NM_002714 HPRD:04797 PPP1R10 CAT53|FB19|PNUTS|PP1R10|R111|p99 protein phosphatase 1, regulatory subunit 10 protein-coding 0.023355 0.440678 -52(TTGCGACG,-,0.00),236(TAGTGACG,-,0.00) -34(GGGCTCAGGGGG,-,0.00) -19(GGGGTAAA,+,0.00) 561_WT_peak_1588-2 chr12 9912642 9912890 + 273 NA intron (NM_001781, intron 1 of 4) intron (NM_001781, intron 1 of 4) 731 NM_001781 969 Hs.208854 NM_001781 HPRD:00119 CD69 AIM|BL-AC/P26|CLEC2C|EA1|GP32/28|MLR-3 CD69 molecule protein-coding 0.004032 0.373494 561_WT_peak_1588-3 chr12 9913288 9913546 + 273 NA promoter-TSS (NM_001781) promoter-TSS (NM_001781) 80 NM_001781 969 Hs.208854 NM_001781 HPRD:00119 CD69 AIM|BL-AC/P26|CLEC2C|EA1|GP32/28|MLR-3 CD69 molecule protein-coding 0.011628 0.409266 561_WT_peak_1573 chr12 8179490 8179860 + 272 NA Intergenic Intergenic -5684 NM_018416 55810 Hs.120844 NM_018416 HPRD:17014 FOXJ2 FHX forkhead box J2 protein-coding 0.051351 0.630728 90(GTTCCCGGGCCG,-,0.00) 86(CCACGTTCCCGG,+,0.00) -93(CGTACCCG,-,0.00) -107(GGCCCCATGGCC,+,0.00) 561_WT_peak_2232 chr14 58764469 58764858 + 272 NA promoter-TSS (NM_023000) promoter-TSS (NM_023000) 192 NR_029434 379025 Hs.531089 NR_029434 ENSG00000257621 FLJ31306 - uncharacterized LOC379025 ncRNA 0.066838 0.592308 206(GGCGCCGA,-,0.00) -95(TCCCGCCCCT,+,0.00) -90(CCCCTTCTCCCC,-,0.00) 210(CCGACAAG,-,0.00) 561_WT_peak_3997 chr2 27304151 27304437 + 271 NA intron (NM_007046, intron 3 of 7) intron (NM_007046, intron 3 of 7) 2859 NM_007046 11117 Hs.63348 NM_007046 HPRD:00563 EMILIN1 EMI|EMILIN|gp115 elastin microfibril interfacer 1 protein-coding 0.027972 0.564460 561_WT_peak_5859 chr5 96270269 96271344 + 271 NA promoter-TSS (NM_005575) promoter-TSS (NM_005575) -540 NM_005575 4012 Hs.527199 NM_005575 HPRD:01041 LNPEP CAP|IRAP|P-LAP|PLAP leucyl/cystinyl aminopeptidase protein-coding 0.082791 0.638476 220(AAGCGGTT,+,0.00),567(AGCCGCCA,-,0.00),781(AGCGACCT,-,0.00) 159(CTGGGAGGGCGG,-,0.00) 110(GGGCCGGGGCTG,-,0.00) 508(CGGGCCGGGC,-,0.00),616(TCCCCGCCCT,+,0.00) 511(GCCGGGCG,+,0.00) 392(TAGCGCCG,-,0.00),780(TAGCGACC,-,0.00) 116(GGGCTGAGGGAG,-,0.00),156(GCGCTGGGAGGG,-,0.00) 529(GGGTTTTG,-,0.00) 436(GGGAACCGCAGG,+,0.00),490(CCTGCGGCGCCC,-,0.00) 493(GCGGCGCCCGCG,+,0.00) 398(CGCGGAGCCTTG,+,0.00) 24(GTCCCTGGCGCC,-,0.00),333(GGCAATGGCGCG,-,0.00),589(CCCCAGGGCGCC,-,0.00) 348(GCTGGGGGGC,+,0.00),396(GCCGCGGAGC,+,0.00) 842(CAGCGAGGCCTC,-,0.00) 561_WT_peak_6020 chr5 172197614 172198691 + 271 NA promoter-TSS (NM_004417) promoter-TSS (NM_004417) 51 NM_004417 1843 Hs.171695 NM_004417 HPRD:02835 DUSP1 CL100|HVH1|MKP-1|MKP1|PTPN10 dual specificity phosphatase 1 protein-coding 0.116992 0.719852 485(CGCGCAGGGGGA,-,0.00),491(GGGGGAGGGGGG,-,0.00),716(GGAGGAGGAGGG,-,0.00) -45(GGCGGCCGCG,+,0.00),849(CTCGGCCGCC,-,0.00) 302(AAGCCGCT,+,0.00),303(AGCCGCTT,-,0.00) 712(GCGGGGAGGAGG,-,0.00) 67(GGCGTTGA,-,0.00) -147(GCGCGCCGGCCG,+,0.00) 241(AGGGCAGGGC,-,0.00) 641(CCCCCGCC,-,0.00) -23(GGGCACGA,-,0.00),19(CCGCACGA,-,0.00) 805(CCGCTCCTCCCT,-,0.00) 313(GGACTGAGAGAG,-,0.00) 391(CGTCGCAC,+,0.00) 306(CGCTTTTG,-,0.00) 612(CGCTCGCCGCGC,-,0.00) 335(CGGGGCTCCGGG,-,0.00) -99(GGGCGGCGCT,+,0.00),247(GGGCGGCGCT,+,0.00) 358(CTTCGCGG,+,0.00),388(CCGCGTCG,-,0.00) -139(GCCGCCAGGGCC,+,0.00),-104(GTCCAGGGCGGC,-,0.00),-5(GCCCATGGCGCC,-,0.00),172(GACCATGGCCGG,-,0.00),242(GGGCAGGGCGGC,-,0.00) -160(GCCTCGCGGC,-,0.00),-41(GCCGCGGAGC,+,0.00),414(CCTTCGCAGC,-,0.00),799(GCCTCGCCGC,-,0.00) 632(GCGGCCCGGCCC,+,0.00) 561_WT_peak_4811-2 chr21 43845333 43845628 + 270 NA intron (NM_001001895, intron 6 of 13) intron (NM_001001895, intron 6 of 13) 21509 NM_001001895 53347 Hs.473912 NM_018961 HPRD:06904 UBASH3A CLIP4|STS-2|TULA|TULA-1 ubiquitin associated and SH3 domain containing A protein-coding 0.020339 0.466216 -5(GCGAGCCGCAGG,+,0.00) 561_WT_peak_117 chr1 26324456 26324988 + 270 NA promoter-TSS (NM_000437) promoter-TSS (NM_000437) -74 NM_000437 5051 Hs.477083 NM_000437 HPRD:03824 PAFAH2 HSD-PLA2 platelet-activating factor acetylhydrolase 2, 40kDa protein-coding 0.062030 0.530957 264(TCACCCTCCTCA,+,0.00),334(GGAGGAGGTTGG,-,0.00) 142(CGAAACCG,+,0.00),229(GGGTTTTG,-,0.00) 146(ACCGCCCA,+,0.00) 561_WT_peak_1310 chr11 61196987 61197924 + 270 NA promoter-TSS (NM_017841) promoter-TSS (NM_017841) 9 NM_001136040 79869 Hs.718984 NM_024811 HPRD:16906 CPSF7 CFIm59 cleavage and polyadenylation specific factor 7, 59kDa protein-coding 0.102455 0.680171 92(TCTGCCTCCTCC,+,0.00) 366(CCTTCCGGCTCA,-,0.00),446(GTTTCCGGTGCA,-,0.00) -34(AGGCGGCT,+,0.00),6(AGCCGCCT,-,0.00),441(AGCCGGTT,-,0.00),661(AGGTCGCT,+,0.00) 161(CCCCCTTCCCGC,+,0.00),307(CCGCCCCCCCCG,+,0.00),530(CGGGGCGGGCGG,-,0.00) 253(GGCGGCGA,-,0.00) -1(CAGCTCCAGCCG,+,0.00) 214(CCGACCGC,+,0.00) 313(CCCCCGCC,-,0.00),406(GCCGGGCG,+,0.00) 59(CCGCTCCCTCCC,-,0.00),337(CCGCCACTTCCG,-,0.00) 496(CGTCGCTG,+,0.00) 289(CGCTCTCCGCCC,+,0.00) 73(CAAACCCG,+,0.00) 434(CCCGCGCA,+,0.00) 51(GGCCCGCCCCGC,-,0.00),245(GCGGCGGCGGCG,+,0.00),248(GCGGCGGCGGCG,+,0.00),529(CCGGGGCGGGCG,+,0.00) 75(AACCCGGCCC,-,0.00) -39(CCCCAAGGCGGC,-,0.00) -162(GCGCCGCAGC,-,0.00),-80(GCGGCGAAGC,+,0.00) 45(CAGCTAGGCCCG,-,0.00) 561_WT_peak_804 chr1 235147427 235148126 + 270 NA Intergenic Intergenic 143476 NR_002956 677802 Hs.744743 NR_002956 SNORA14B ACA14b small nucleolar RNA, H/ACA box 14B snoRNA 0.027182 0.517143 -59(AAGCCGTT,+,0.00) 435(TCGAGCCG,+,0.00) 119(GTCAGACG,-,0.00) 207(CGGTGTTG,-,0.00) 561_WT_peak_2987 chr17 4046350 4047358 + 270 NA promoter-TSS (NM_001254755) promoter-TSS (NM_001254755) -61 NM_001254755 124936 Hs.513871 NM_144611 HPRD:14549 CYB5D2 - cytochrome b5 domain containing 2 protein-coding 0.082341 0.600595 66(GGAGGCCGAG,+,0.00),677(GGCGGCCCAG,+,0.00) 772(TAGCGGCT,+,0.00),773(AGCGGCTT,-,0.00),834(AGCCACCT,-,0.00) 228(CCCGGGAGGCGG,-,0.00) 231(GGGAGGCGGAGG,+,0.00) 30(GGCGCGGT,-,0.00) -117(CTAGGCGG,+,0.00),71(CCGAGACG,-,0.00),467(CGTCTCGG,+,0.00) 777(GCTTCGCAGG,-,0.00) 567(TGGGCCTGGCTG,+,0.00),790(CAGCGAGGCTGC,-,0.00) 561_WT_peak_4811 chr21 43845105 43845210 + 270 NA intron (NM_001001895, intron 6 of 13) MLT1B|LTR|ERVL-MaLR 21186 NM_001001895 53347 Hs.473912 NM_018961 HPRD:06904 UBASH3A CLIP4|STS-2|TULA|TULA-1 ubiquitin associated and SH3 domain containing A protein-coding 0.047619 0.575472 -116(AAGCCGCT,+,0.00) 561_WT_peak_6179 chr6 26537640 26538489 + 270 NA promoter-TSS (NM_006353) promoter-TSS (NM_006353) -508 NM_006353 10473 Hs.236774 NM_006353 HMGN4 HMG17L3|NHC high mobility group nucleosomal binding domain 4 protein-coding 0.053004 0.488235 256(AAGTCTCT,+,0.00) -24(TCGACTCC,+,0.00) -88(GGTACGCG,-,0.00),384(CGCACGCG,-,0.00) -54(CGTCTGAC,+,0.00) 533(CGAAACCG,+,0.00) -128(CGGGTACA,+,0.00) -81(GCAGGGCCAGTG,+,0.00) 561_WT_peak_4922 chr22 39916416 39917000 + 269 NA 5' UTR (NM_182810, exon 1 of 3) 5' UTR (NM_182810, exon 1 of 3) 139 NM_182810 468 Hs.496487 NM_001675 HPRD:06817 ATF4 CREB-2|CREB2|TAXREB67|TXREB activating transcription factor 4 protein-coding 0.094178 0.675214 -78(ATGCGTCT,+,0.00),159(AGCGGCTT,-,0.00) 41(CCTCCTCCCCGC,+,0.00) -143(GGCGTCAA,-,0.00) 213(GGGCCGGCGCGG,-,0.00) 46(TCCCCGCCCT,+,0.00) -56(TAGAGACG,-,0.00) 399(CCTCGGAC,+,0.00) 223(GGGTTTTG,-,0.00) -4(TTTGCCCG,-,0.00) 210(CTGGGGCCGGCG,+,0.00),248(CTGGGGCCAGGG,+,0.00) 265(CCGCCAAG,-,0.00),325(CCGAGACG,-,0.00) -25(GGCCACGGCAGC,-,0.00),67(GCCACCATGGCG,+,0.00),168(AGCCATGGCGTG,-,0.00),252(GGCCAGGGCGGT,-,0.00),264(GCCGCCAAGGGG,+,0.00) 139(GCTCTGCAGC,-,0.00) 561_WT_peak_6057 chr5 180615776 180616046 + 268 NA Intergenic tRNA-Pro-CCA|tRNA|tRNA 2997 NR_108031 102577426 Hs.277359 NR_108031 LOC102577426 - uncharacterized LOC102577426 ncRNA 0.044444 0.461255 561_WT_peak_7323 chr9 86594413 86595739 + 268 NA promoter-TSS (NM_024945) promoter-TSS (NM_024945) 108 NM_031263 3190 Hs.522257 NM_002140 HPRD:02834 HNRNPK CSBP|HNRPK|TUNP heterogeneous nuclear ribonucleoprotein K protein-coding 0.095023 0.657121 345(GGAGGTGGGGGA,-,0.00),936(GCGCCCTCCTCC,+,0.00) 135(GACCCCGGGCCG,-,0.00) 294(AAGTCTCT,+,0.00),403(AAGCGGCT,+,0.00) -141(CCCGCCTCCCGG,+,0.00),-140(CCGCCTCCCGGC,+,0.00),573(CCGCCTTCTCGC,+,0.00) 873(GACGTCGA,-,0.00) -164(GAGCGCCAACGC,+,0.00),9(GAGCGCCGACCC,+,0.00),786(GAGCCCCAACCC,+,0.00) 953(CGTTCGCG,-,0.00) 531(CCGGTCGG,-,0.00),1119(TCGGGCGG,-,0.00) 140(CGGGCCGGGA,-,0.00) 570(CCCCCGCC,-,0.00) 187(CGGCGCGA,-,0.00) 720(GGGCTGGGAGGC,-,0.00) -110(CGGGTAAC,+,0.00),-98(CGGGAAAA,+,0.00),797(CTTACCCG,-,0.00) 516(GCCGCGCC,+,0.00) 0(GGCGGAGCCGAG,+,0.00) 402(AAAGCGGCTC,-,0.00) -3(CTAGGCGG,+,0.00) 183(GCGGCGGCGC,+,0.00),722(GCTGGGAGGC,+,0.00) 561_WT_peak_6913 chr7 155437183 155437847 + 268 NA 5' UTR (NM_053043, exon 1 of 18) 5' UTR (NM_053043, exon 1 of 18) 312 NM_053043 155435 Hs.591815 NM_053043 HPRD:17310 RBM33 PRR8 RNA binding motif protein 33 protein-coding 0.103916 0.697744 -35(CCGCCCGCCTCC,+,0.00) -32(CCCGCCTCCCGG,+,0.00),-31(CCGCCTCCCGGC,+,0.00) -41(CGGCGCCCGCCC,+,0.00) 144(CGTACCCG,-,0.00) -98(CCGCCCGA,+,0.00) -140(GCCGGGCG,+,0.00),-56(GGCGGGGG,+,0.00),88(CGCCCGGC,-,0.00),313(GGCGGGGG,+,0.00),326(GCCGGGGG,+,0.00) 418(CCTCGCTA,+,0.00) 167(CGTCGGCC,+,0.00) 56(CGGAGGCGAAGG,+,0.00) 299(ACCGCGCC,+,0.00) -50(GGCAGGCCCCGG,-,0.00),205(GCCGGGCCCCGC,-,0.00),206(CCGGGCCCCGCG,+,0.00) 80(CCGCGAAG,-,0.00) 220(TGCCATGGCGGC,-,0.00),230(GCCGCCCTGGGA,+,0.00) 561_WT_peak_146 chr1 28974376 28974827 + 268 NA promoter-TSS (NR_004407) promoter-TSS (NR_004407) -511 NR_004407 26824 Hs.640266 NR_004407 ENSG00000270103 RNU11 RNU11-1|U11 RNA, U11 small nuclear snRNA 0.031042 0.446903 208(AGACGCCT,-,0.00) 261(CGGAAGGAGCGG,+,0.00) 561_WT_peak_3034 chr17 8076369 8077082 + 268 NA 3' UTR (NM_032354, exon 5 of 5) 3' UTR (NM_032354, exon 5 of 5) 2989 NM_183065 84314 Hs.513933 NM_032354 TMEM107 GRVS638|PRO1268 transmembrane protein 107 protein-coding 0.025245 0.408964 527(CATTCGGCTGCC,-,0.00) 561_WT_peak_3634 chr19 12792293 12792879 + 267 NA promoter-TSS (NM_001206974) promoter-TSS (NM_001206974) 115 NM_013406 1725 Hs.79064 NM_001930 HPRD:02969 DHPS DHS|DS|MIG13 deoxyhypusine synthase protein-coding 0.097270 0.591141 173(GGCGGCCCAG,+,0.00) 303(TCGCCGCC,+,0.00) 44(TCGGGCGG,-,0.00) -30(TGGTGCCG,+,0.00) -112(CGTCCCTA,+,0.00) -30(TGGTGCCGAAGG,+,0.00) -8(TGCGCGGT,-,0.00) 91(CGCTGGCGCCTC,-,0.00) -122(CGCCCCTCCGCG,-,0.00),205(CGCGTCTCCGCA,-,0.00) -163(AACGCTGCCC,-,0.00),-102(AATTCCGCCC,-,0.00),148(AAAGCTGCCC,-,0.00) 561_WT_peak_4817 chr21 45079157 45079463 + 267 NA promoter-TSS (NM_007031) promoter-TSS (NM_007031) 64 NM_007031 11077 Hs.406157 NM_007031 HPRD:05186 HSF2BP - heat shock transcription factor 2 binding protein protein-coding 0.107843 0.657980 -18(GCAGCGCCGGCG,+,0.00),-14(CGCCGGCGCCAC,-,0.00),102(CGCCGCCGCCGC,-,0.00),105(CGCCGCCGCCGC,-,0.00) 11(GGGCCGCTCC,+,0.00) 25(GCTGCCAGGGCC,+,0.00) 62(GCTGCGAGCC,+,0.00),101(GCGCCGCCGC,-,0.00) 130(GCGGCCCGGGCG,+,0.00) 561_WT_peak_3812 chr19 46386695 46386970 + 267 NA TTS (NM_015649) TTS (NM_015649) 2544 NM_015649 26145 Hs.515477 NM_015649 HPRD:17159 IRF2BP1 - interferon regulatory factor 2 binding protein 1 protein-coding 0.065455 0.579710 -119(TCGGCCGG,-,0.00) 38(AGGAGCAGAAGG,+,0.00) -75(ACCGCGCA,+,0.00) 561_WT_peak_7581 chrX 73833982 73834659 + 267 NA 5' UTR (NM_183353, exon 1 of 5) 5' UTR (NM_183353, exon 1 of 5) 141 NM_183353 51132 Hs.653288 NM_016120 HPRD:02304 RLIM NY-REN-43|RNF12 ring finger protein, LIM domain interacting protein-coding 0.085672 0.631268 408(GGAGGAGGAGGG,-,0.00),411(GGAGGAGGGGGA,-,0.00),497(CCACCCTCCTCC,+,0.00) 143(TTCGGCCGCC,-,0.00) 434(GCGGCAAGGCGG,-,0.00) -157(GGGCTGCAGCTC,-,0.00) 135(TCGGTTGG,-,0.00) 450(CGGTTTGG,-,0.00) -145(GCGCGGCCACCG,+,0.00) 46(CGCGGCTCCGCT,-,0.00) 130(CCGACTCG,-,0.00),131(CGACTCGG,+,0.00),430(CGACGCGG,+,0.00) -43(CCCCCGCAGC,-,0.00),165(GCTCCGCACC,-,0.00),345(GCACCGCAGC,-,0.00) 561_WT_peak_6377 chr6 76311632 76312475 + 267 NA 5' UTR (NM_015571, exon 1 of 24) 5' UTR (NM_015571, exon 1 of 24) 431 NM_001100409 26054 Hs.485784 NM_015571 HPRD:05417 SENP6 SSP1|SUSP1 SUMO1/sentrin specific peptidase 6 protein-coding 0.107948 0.686019 204(AGAGGCCT,-,0.00) 180(TCGTCGCC,+,0.00),350(GGCGTCTA,-,0.00) 238(GCCCGCCAGCCC,+,0.00) 256(AGGCCCGGGC,-,0.00) 223(GCCGCGGG,+,0.00) 219(TCGGGCCG,+,0.00),453(CGGCAAGA,-,0.00) -68(TAGCGGCG,-,0.00) 142(GGGCCGAGAGGA,-,0.00) 2(GGCGCGGC,-,0.00),120(TGGGCGGT,-,0.00),367(GGCGCGGC,-,0.00) 225(CGCGGGCCTCGC,-,0.00) 367(GGCGCGGCCC,-,0.00),545(AACGTGGCCC,-,0.00) 667(CCGCCTAG,-,0.00) 230(GCCTCGCTGC,-,0.00) -41(GGGGCCTGGGGG,+,0.00),110(GCAGCCTGGGTG,+,0.00),227(CGGGCCTCGCTG,+,0.00),240(CCGCCAGCCCGC,-,0.00) 561_WT_peak_150 chr1 31538102 31538704 + 266 NA intron (NM_001020658, intron 1 of 21) intron (NM_001020658, intron 1 of 21) 161 NM_001020658 9698 Hs.281707 NM_014676 HPRD:06230 PUM1 HSPUM|PUMH|PUMH1|PUML1 pumilio RNA-binding family member 1 protein-coding 0.058140 0.605307 359(AGCGGCAT,-,0.00),380(TGGCGGCT,+,0.00) -76(TCTACGCC,+,0.00),-31(TCGACCCC,+,0.00) 94(CCTTCTCACCCC,+,0.00) 311(GGCGCGGT,-,0.00) 334(CTCCGGCCCCGG,-,0.00),340(CCCCGGCCCCGG,-,0.00),351(GCGGTGGCAGCG,+,0.00) 71(GGCCCCGGCGGC,-,0.00),282(CAACATGGCGGC,-,0.00) 10(GGGGCCTTGCTG,+,0.00),64(CAGCCAGGGCCC,-,0.00) 561_WT_peak_4954 chr22 43010321 43011023 + 266 NA promoter-TSS (NR_029422) promoter-TSS (NR_029422) 296 NR_103820 84271 Hs.505802 NM_032311 HPRD:17875 POLDIP3 PDIP46|SKAR polymerase (DNA-directed), delta interacting protein 3 protein-coding 0.113960 0.704125 506(AGAACCGGAAGG,+,0.00) 309(AGGCCTCT,+,0.00) 30(CCCGGAACGCGG,-,0.00),167(CGGGGACGGCGG,-,0.00) 327(TCGCCGCC,+,0.00) 145(GGGCGGGCGGTC,-,0.00),212(GGGCGGGCGCAC,-,0.00) 463(CGTCCGCG,-,0.00) -118(GCGGTCGG,-,0.00),151(GCGGTCGG,-,0.00) 421(GCCCGCCCCT,+,0.00) 257(CCCCCGCC,-,0.00) 511(CGGAAGGGGCGG,+,0.00) 235(CGTCGCTC,+,0.00),443(GAGCGACG,-,0.00) 101(CGTCGGCC,+,0.00) 81(CCCTGTCCCCGC,-,0.00),166(GCGGGGACGGCG,+,0.00) 331(CGCCGCCCCGCG,-,0.00) -159(GGGCCGCGTG,+,0.00) 71(CGAGGCGG,+,0.00),232(CCGCGTCG,-,0.00),260(CCGCCTCG,-,0.00) 159(GGCCACGGCGGG,-,0.00) 6(GCTGCGCCGC,+,0.00),6(GCTGCGCCGC,-,0.00) 561_WT_peak_248 chr1 54304051 54304450 + 266 NA promoter-TSS (NM_018087) promoter-TSS (NM_018087) -25 NR_033142 55706 Hs.476525 NM_018087 HPRD:08547 NDC1 NET3|TMEM48 NDC1 transmembrane nucleoporin protein-coding 0.055138 0.572500 42(TCGACGGC,+,0.00) -92(GCCGCGCA,+,0.00) -158(AGCCCGGCCC,-,0.00) -133(CCTGCGAGGC,+,0.00) 561_WT_peak_5682 chr5 32585599 32586197 + 266 NA intron (NM_006713, intron 1 of 4) CpG 293 NM_006713 10923 Hs.229641 NM_006713 HPRD:02737 SUB1 P15|PC4|p14 SUB1 homolog (S. cerevisiae) protein-coding 0.117057 0.727880 241(GGCGGCCGGG,+,0.00) 79(TGGCGGCT,+,0.00) 110(CGGCGTCCCCGG,+,0.00),188(CCGGGGAGCCGA,-,0.00),278(CGGCGTCCCCGG,+,0.00) 142(TCCACGCC,+,0.00) -141(CAGCCCCAGCGC,+,0.00),207(CGGCGGGCGCTG,-,0.00) 321(CGCGTGCG,+,0.00) -42(CCGAGCGA,+,0.00) 68(GCCGCGGG,+,0.00),342(CCCCCGCC,-,0.00),406(GCCGGGGG,+,0.00) 12(CCCTCCCAGCCG,+,0.00) 36(CCTTCGGCCCTC,-,0.00) -26(TGCGCGGG,-,0.00) -128(GCGGGGCCGGCG,+,0.00) 189(CGGGGAGCCGAG,+,0.00) 196(CCGAGTCG,-,0.00),202(CGAGGCGG,+,0.00) 61(GGCAATGGCCGC,-,0.00) -131(GCGGCGGGGC,+,0.00) 18(CAGCCGGGCCGT,-,0.00),302(GCGGCCTGCCTA,+,0.00) 561_WT_peak_7256 chr9 37119935 37120223 + 266 NA promoter-TSS (NM_001289120) promoter-TSS (NM_001289120) -390 NR_110317 84186 Hs.654700 NM_032226 HPRD:15703 ZCCHC7 AIR1 zinc finger, CCHC domain containing 7 protein-coding 0.079861 0.619377 65(GGCGTCCA,-,0.00) -40(AGTACGCG,-,0.00) 561_WT_peak_4454 chr2 206950405 206951013 + 266 NA 5' UTR (NM_017759, exon 1 of 11) 5' UTR (NM_017759, exon 1 of 11) 197 NM_017759 54891 Hs.445036 NM_017759 HPRD:07894 INO80D - INO80 complex subunit D protein-coding 0.067434 0.642036 -151(CGCCCCGGAGGC,+,0.00),314(GCTGCCGGGGCT,-,0.00) 147(CTCGGCTGCC,-,0.00) -31(TCGCCGCC,+,0.00) -113(GGGCGCCGGCCC,+,0.00),149(CGGCTGCCGCTG,-,0.00) -42(CGTAAGCG,-,0.00) -132(CCCCCGGC,-,0.00) -14(TGCGCGGC,-,0.00) -110(CGCCGGCCCCAC,-,0.00),29(GCCGGGCCTGGG,+,0.00) -77(GGGGCCTGGCGT,+,0.00) 561_WT_peak_3040 chr17 8129433 8129674 + 266 NA non-coding (NR_046431, exon 22 of 22) non-coding (NR_046431, exon 22 of 22) -2192 NR_026951 284029 Hs.121692 NM_173621 HPRD:08755 LINC00324 C17orf44|NCRNA00324 long intergenic non-protein coding RNA 324 ncRNA 0.041494 0.442149 24(GGCGCCGA,-,0.00) -122(CTTACGCG,-,0.00) -79(TTTAGCCG,-,0.00) 18(AGCCACGGCGCC,-,0.00) 561_WT_peak_1075 chr10 85898589 85899008 + 266 NA promoter-TSS (NM_014394) promoter-TSS (NM_014394) -387 NM_014394 27069 Hs.352656 NM_014394 HPRD:17038 GHITM DERP2|HSPC282|MICS1|PTD010|TMBIM5 growth hormone inducible transmembrane protein protein-coding 0.031026 0.395238 -56(AGGCGGCT,+,0.00) 561_WT_peak_4307 chr2 133038462 133038692 + 265 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA -23035 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo 0.021739 0.519481 -164(TGGACGCC,+,0.00) 561_WT_peak_3936 chr19 58898007 58898839 + 265 NA promoter-TSS (NM_001009) promoter-TSS (NM_001009) -198 NR_039910 100616168 NR_039910 miRBase:MI0017394 MIR4754 - microRNA 4754 ncRNA 0.081731 0.623049 414(TGACCCGGAAGT,+,0.00) 62(AGGCGGCT,+,0.00) 56(CCGGTGAGGCGG,-,0.00) 496(TCTACGCC,+,0.00) -65(GCCGGGCG,+,0.00),111(CCCGCGGC,-,0.00),450(CCCGCGGC,-,0.00),544(GCCGCGGG,+,0.00),596(CCCGCGGC,-,0.00) 51(GCGTGCCG,+,0.00) 563(TAGGGACG,-,0.00) 217(CGCTTTTG,-,0.00) 298(ACTGCGCA,+,0.00) 547(GCGGGGCCGGGG,+,0.00) 546(CGCGGGGCCGGG,+,0.00) -48(GGGCCGCGTG,+,0.00),284(GGGCCGCTTC,+,0.00) 544(GCCGCGGGGC,+,0.00),594(GCCCCGCGGC,-,0.00) 561_WT_peak_3417 chr18 3450557 3450988 + 265 NA promoter-TSS (NM_173210) promoter-TSS (NM_173210) 602 NM_003244 7050 Hs.373550 NM_003244 HPRD:04023 TGIF1 HPE4|TGIF TGFB-induced factor homeobox 1 protein-coding 0.102088 0.673611 -97(GGCGGCCGTG,+,0.00),186(GGCGGCCGGG,+,0.00) 196(GCCGCGGG,+,0.00),243(CCCCCGCC,-,0.00),249(CCCCCGCC,-,0.00),255(CCCCCGCC,-,0.00) 211(CGGCTTTG,-,0.00) 167(TTTTCCCG,-,0.00) -156(GCCGCGCC,+,0.00) 244(CCCCGCCCCCGC,-,0.00),250(CCCCGCCCCCGC,-,0.00) -158(GGGCCGCGCC,+,0.00) 140(CCGAGTAG,-,0.00) 561_WT_peak_6794 chr7 102789536 102790281 + 263 NA promoter-TSS (NM_001122838) promoter-TSS (NM_001122838) -339 NM_001122838 222236 Hs.324271 NM_198990 HPRD:14809 NAPEPLD FMP30|NAPE-PLD N-acyl phosphatidylethanolamine phospholipase D protein-coding 0.102013 0.671582 -36(GATCCCGGGCCG,-,0.00),71(GCTTCCGGCCAC,-,0.00),243(GTCGCCGGGTCA,-,0.00) 482(AGAGGCTT,-,0.00) -134(CCGTGGAGGAGG,-,0.00),-84(CCGCCTCCCGCG,+,0.00),42(CCGGGAGCGCGC,-,0.00) 214(TCGCCGCC,+,0.00),241(TCGTCGCC,+,0.00),355(GGCGCCGA,-,0.00) 128(CGGCAGGCGCTC,-,0.00) -28(GCCGCGGG,+,0.00) 66(CCGCGGCTTCCG,-,0.00) -89(GAAAACCG,+,0.00) 354(GGGCGCCGAAGC,+,0.00) 89(CCCGCGCA,+,0.00) -19(GCGCGGCCAGAG,+,0.00),166(CGCTGGCTCCGC,-,0.00),284(GCAGGGCCAGCG,+,0.00) 105(CCGCGTAG,-,0.00),217(CCGCCTCG,-,0.00),411(CCGCCTCG,-,0.00) 99(GCGCCGCCGC,-,0.00) 396(GCGGCCTGCCCC,+,0.00) 561_WT_peak_196 chr1 40723222 40724022 + 262 NA promoter-TSS (NM_005857) promoter-TSS (NM_005857) -100 NM_005857 10269 Hs.132642 NM_005857 HPRD:07349 ZMPSTE24 FACE-1|FACE1|HGPS|PRO1|STE24|Ste24p zinc metallopeptidase STE24 protein-coding 0.063750 0.606742 596(GCCGGCCGAG,+,0.00) 117(AAGCCGCT,+,0.00) -42(CTGGGAAGTCGG,-,0.00) 48(CGGCCCCAGCCC,+,0.00),328(GGGCTGGGGCTT,-,0.00) 597(CCGGCCGA,+,0.00) 293(TCCCCGCCCT,+,0.00) -60(AGGCACGA,-,0.00) 409(AGCGCGCA,+,0.00) 601(CCGAGAAG,-,0.00) 265(CAGCCGGGCCCG,-,0.00) 561_WT_peak_203 chr1 42922202 42922672 + 262 NA promoter-TSS (NM_001146192) promoter-TSS (NM_001146192) 272 NM_001077447 79717 Hs.706662 NM_024664 HPRD:07760 PPCS - phosphopantothenoylcysteine synthetase protein-coding 0.097872 0.687898 188(GCCTTCGGGCCC,-,0.00) 224(GGAGGCCGAG,+,0.00) 196(GCCCAGCCCT,+,0.00) -1(CGGCACCA,-,0.00) 248(GGGTTTTG,-,0.00) -82(TGCGCGCT,-,0.00),61(GGCGCGGT,-,0.00) -155(CGCAGGCGCCGG,-,0.00),-34(GCAGGGCCGGCG,+,0.00) -55(CTTCGCGG,+,0.00) -56(GCTTCGCGGC,-,0.00) -51(GCGGCCAGGCTG,+,0.00) 561_WT_peak_7369 chr9 100747380 100747947 + 262 NA intron (NM_006401, intron 1 of 6) CpG 2174 NM_006401 10541 Hs.730654 NM_006401 HPRD:09803 ANP32B APRIL|PHAPI2|SSP29 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B protein-coding 0.088183 0.589789 -121(CGCGGAGGGCGG,-,0.00) -51(AGGTGGCT,+,0.00),237(AGAGGCTT,-,0.00) -121(CGCGGAGGGCGG,-,0.00),92(TGTCCTTCCCGG,+,0.00) 67(CGGGCCGGGC,-,0.00) -61(TCGTGCCC,+,0.00) -162(TAGCGCCG,-,0.00) 176(CGTCAGAC,+,0.00) 296(CAAATCCG,+,0.00) 0(TTTACCTG,-,0.00) -115(GGGCGGCCCCGC,-,0.00),61(GCGGGGCGGGCC,+,0.00) -114(GGCGGCCCCGCG,-,0.00) 68(GGGCCGGGCT,+,0.00),119(GGGCCGCTCC,+,0.00) 193(CCGCCACG,-,0.00) 561_WT_peak_7170 chr8 141521445 141521835 + 262 NA promoter-TSS (NR_040712) promoter-TSS (NR_040712) 243 NR_023360 54108 Hs.279704 NM_017444 HPRD:06275 CHRAC1 CHARC1|CHARC15|CHRAC-1|CHRAC-15|CHRAC15|YCL1 chromatin accessibility complex 1 protein-coding 0.110256 0.739130 57(GCATCCGGGTCA,-,0.00) -65(AGCCACTT,-,0.00) 183(CCGCCCCGCCGG,+,0.00) -56(GCGGTCGG,-,0.00) 18(AGGGCGGGGA,-,0.00) 149(GGCGGGGG,+,0.00) 23(GGGGAGCAGCGG,+,0.00) 6(TGGGTAAA,+,0.00) -104(GGCGCGGC,-,0.00) -102(CGCGGCTCCCCG,-,0.00),22(CGGGGAGCAGCG,+,0.00) -162(GGGCCGCTCC,+,0.00) -60(CTTCGCGG,+,0.00) 143(GGGCAGGGCGGG,-,0.00) -150(GCCTCGCGGC,-,0.00) 561_WT_peak_6326 chr6 42738735 42739613 + 261 NA Intergenic Intergenic -25290 NM_003192 6903 Hs.75064 NM_003192 HPRD:04276 TBCC CFC tubulin folding cofactor C protein-coding 0.028474 0.480091 164(CGGCCCGGCTTC,+,0.00) 293(AGGCCTCT,+,0.00) 329(GGCGGGGG,+,0.00) 374(GGGTTTTG,-,0.00) -147(CCTCCGACTCCC,-,0.00) 278(GCTGCGCA,+,0.00) 252(CCGCCTAG,-,0.00) 163(GCGGCCCGGCTT,+,0.00) 561_WT_peak_1780 chr12 77157572 77158411 + 261 NA 5' UTR (NM_015336, exon 1 of 17) 5' UTR (NM_015336, exon 1 of 17) 137 NM_015336 23390 Hs.4014 NM_015336 HPRD:09697 ZDHHC17 HIP14|HIP3|HYPH zinc finger, DHHC-type containing 17 protein-coding 0.104887 0.711905 230(TCGCCCTCCGCC,+,0.00) 319(CGGCCCGGATGA,+,0.00) -143(CTCGGCTGCC,-,0.00),-43(CCCGGCCGCC,-,0.00),446(GGCGGCCGAC,+,0.00) -61(AAGCGACT,+,0.00),264(AAACGCTT,-,0.00) -38(CCGCCTCCCCCG,+,0.00) 209(GGGCTCGCGCTC,-,0.00) 105(CGCGCACG,+,0.00),107(CGCACGCG,-,0.00) 562(CCGACCGG,+,0.00) -45(CGCCCGGC,-,0.00),20(GCCGCGGG,+,0.00) 473(ACGTGCCG,+,0.00) 449(GGCCGACG,-,0.00) 103(TCCGCGCA,+,0.00) 23(GCGGGGCCCACG,+,0.00),206(GCGGGGCTCGCG,+,0.00),216(CGCTCGCCCCGC,-,0.00),551(GCGGGGCGGGCC,+,0.00) 14(CCCCGAGCCGCG,+,0.00),97(CGCGCTTCCGCG,-,0.00),518(CGCGGCTGCGAG,-,0.00) 93(GGGCCGCGCT,+,0.00) 192(CCGCGTCG,-,0.00),237(CCGCCTCG,-,0.00) -106(GCTCCGGAGC,+,0.00),-106(GCTCCGGAGC,-,0.00),20(GCCGCGGGGC,+,0.00) -46(CCGCCCGGCCGC,-,0.00),0(CAGCCGGGACCC,-,0.00),88(GGGCCGGGCCGC,-,0.00) 561_WT_peak_1869 chr12 113622858 113623286 + 261 NA promoter-TSS (NM_032848) promoter-TSS (NM_032848) 212 NM_001111322 79039 Hs.506861 NM_024072 HPRD:13129 DDX54 DP97 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 protein-coding 0.109813 0.722611 101(TCGCCGTCCTCC,+,0.00) -156(AGCCCCGGGATC,+,0.00),60(CCTTCCGGGCCC,-,0.00),209(GCCGCCGGGCCC,-,0.00) 223(GTCGGCCGCC,-,0.00) -5(GGCCTCGA,-,0.00) 195(GCGACCGA,+,0.00) 121(GCCGCGGG,+,0.00) 235(TCGGGCCG,+,0.00) -78(CAAGACCG,+,0.00) -150(GGGATCCCAAGG,+,0.00) 137(GCCGCGCC,+,0.00) 10(CCCGGAGCCGGG,+,0.00),139(CGCGCCTCGGCG,-,0.00) 111(CCGAGTCG,-,0.00),220(CTTGTCGG,+,0.00) 181(GGCCATGGCAGC,-,0.00) -39(TCTGCGGAGC,+,0.00),38(GCGTCCCAGC,-,0.00) 561_WT_peak_2029 chr13 45914909 45915368 + 260 NA promoter-TSS (NR_024458) promoter-TSS (NR_024458) 281 NM_003295 7178 Hs.374596 NM_003295 HPRD:15979 TPT1 HRF|TCTP|p02|p23 tumor protein, translationally-controlled 1 protein-coding 0.122004 0.691304 220(GGGGGAGGGGGG,-,0.00) 32(GCGCCTTCCCCG,+,0.00) -41(GGGCGCGAGCCC,+,0.00) -79(CGCACGCG,-,0.00) 157(CGGCGCTA,+,0.00) -136(GCCGCCCA,+,0.00) -119(GCCTGGCGCCGC,-,0.00) -139(AGAGCCGCCC,-,0.00) 21(CCGCGACG,-,0.00) 561_WT_peak_1980 chr13 31247965 31248337 + 260 NA Intergenic tRNA-Asn-AAC|tRNA|tRNA -39464 NM_001204406 241 Hs.507658 NM_001629 HPRD:04742 ALOX5AP FLAP arachidonate 5-lipoxygenase-activating protein protein-coding 0.088710 0.584450 189(AGCGGCCGAG,+,0.00) 115(GGCGTCGC,-,0.00) 15(CGAACGCG,-,0.00) 117(CGTCGCCA,+,0.00) 150(GGGCTGAGAAGT,-,0.00) -63(CGGGTAAA,+,0.00),-47(CGGGAAAA,+,0.00) 85(GCGGCGCCGGCA,+,0.00),163(GCGGGGCGCGCC,+,0.00) 561_WT_peak_6241 chr6 28831286 28831639 + 260 NA promoter-TSS (NR_033379).3 promoter-TSS (NR_033379).3 -8 NR_033379 401242 Hs.448285 NR_033379 ENSG00000225595 LOC401242 - uncharacterized LOC401242 ncRNA 0.042493 0.435028 130(TCGGTCGT,-,0.00) 134(TCGTGCCA,+,0.00) -155(CAAAACGG,+,0.00) 0(GAAAAATGAAGC,+,0.00) 561_WT_peak_5795 chr5 69345189 69345729 + 258 NA 5' UTR (NM_022877, exon 1 of 7) 5' UTR (NM_022877, exon 1 of 7) 109 NM_022874 6606 Hs.535788 NM_000344 HPRD:02646 SMN1 BCD541|GEMIN1|SMA|SMA1|SMA2|SMA3|SMA4|SMA@|SMN|SMNT|T-BCD541|TDRD16A survival of motor neuron 1, telomeric protein-coding 0.081481 0.580407 53(CGGTCCTCCCGG,+,0.00) -131(TCGCGCCG,+,0.00) 274(CGCTCTCAGCAC,+,0.00) 150(CGGGTTTG,-,0.00) 138(GCTGCGCA,+,0.00),224(GGCGCGGC,-,0.00) 356(GGTCCGCGTT,+,0.00) 561_WT_peak_429 chr1 144491182 144491803 + 258 NA intron (NM_001278267, intron 52 of 130) U1|snRNA|snRNA 121227 NR_003242 767846 Hs.657186 NR_003242 PFN1P2 C1orf152|COAS3 profilin 1 pseudogene 2 pseudo 0.038647 0.474277 378(CTCTCCGGTCCG,-,0.00) 415(CGGCACGG,-,0.00),431(TCGTGGCG,+,0.00) -153(TAGAGACG,-,0.00) 385(GTCCGACC,-,0.00) 158(CGGGGAAA,+,0.00),311(TTTACACG,-,0.00) 282(GCCCCGCCGC,-,0.00) 561_WT_peak_2568 chr15 79152794 79153093 + 258 NA Intergenic tRNA-Lys-AAG|tRNA|tRNA -12180 NM_001265603 10933 Hs.374503 NM_006791 HPRD:09532 MORF4L1 Eaf3|HsT17725|MEAF3|MORFRG15|MRG15|S863-6 mortality factor 4 like 1 protein-coding 0.036789 0.396667 -43(TCAGTCGG,-,0.00) 17(CGGGTTTG,-,0.00) 14(GGGCGGGTTT,+,0.00) 561_WT_peak_4431 chr2 201675789 201677128 + 258 NA promoter-TSS (NM_001207068) promoter-TSS (NM_001207068) 189 NM_001207067 9689 Hs.355983 NM_014670 HPRD:16570 BZW1 BZAP45|Nbla10236 basic leucine zipper and W2 domains 1 protein-coding 0.088872 0.661194 268(CCAGCCTCCGCC,+,0.00),329(GGAGGAGGGGGC,-,0.00),661(TCTCCCTCCTCC,+,0.00) 931(GGAGGCCGAG,+,0.00) 310(GGCTTCGA,-,0.00),342(GGCGGCGA,-,0.00),806(TGGACGCC,+,0.00) 1079(TGTACGCG,-,0.00) 601(AGGGCGGGGC,-,0.00) 298(CCCCCGCC,-,0.00),384(GGCGGGGG,+,0.00),646(GGCGGGGG,+,0.00) 281(CCGCACGA,-,0.00) 1151(CCGCTGCTTTCG,-,0.00) 944(TAGCGGCG,-,0.00) 775(CCCGCTCACCCC,+,0.00) 1051(CAAAGCCG,+,0.00) 54(AGCGCGCA,+,0.00) 390(GGCCGGCTCCGC,-,0.00),604(GCGGGGCAAGGG,+,0.00) 767(CGCGGCGCCCCG,+,0.00),767(CGCGGCGCCCCG,-,0.00) 195(AACTCCGCCC,-,0.00) 1012(CGAGGCGG,+,0.00) 210(GGCCAGGGCGGA,-,0.00),252(GCCCCCATGCCC,+,0.00),1055(GCCGCCGCGGCC,+,0.00) 995(GCTGCGAAGG,+,0.00) 835(GCGGGCTGGATG,+,0.00),846(GCGGCCCGGCTT,+,0.00),949(GCGGCCCGGGTG,+,0.00),1038(CCGGCCTGGCTA,+,0.00) 561_WT_peak_547 chr1 155214170 155214809 + 257 NA 5' UTR (NM_001171811, exon 1 of 10) 5' UTR (NM_001171811, exon 1 of 10) 164 NM_001005741 2629 Hs.282997 NM_000157 HPRD:06973 GBA GBA1|GCB|GLUC glucosidase, beta, acid protein-coding 0.070423 0.564063 423(CCCACCGA,+,0.00) 334(CGGCGCGA,-,0.00) 364(TTTTCCCG,-,0.00) 56(CCCGCGCA,+,0.00) 97(CCCGCAGCCGCG,+,0.00) 112(AAAGCAGCCC,-,0.00) 354(CGTGTCGG,+,0.00) 561_WT_peak_818 chr1 237766394 237766624 + 257 NA intron (NM_001035, intron 35 of 104) LSU-rRNA_Hsa|rRNA|rRNA -258966 NR_027247 100130331 Hs.661736 NR_027247 ENSG00000237250 LOC100130331 - POTE ankyrin domain family, member F pseudogene pseudo 0.039130 0.497835 -105(TAGTGACG,-,0.00) -11(CGGGGAAA,+,0.00) 561_WT_peak_1437 chr11 85195087 85195274 + 257 NA intron (NM_001142699, intron 3 of 27) LSU-rRNA_Hsa|rRNA|rRNA 143134 NM_001142699 1740 Hs.367656 NM_001364 HPRD:04663 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs, large homolog 2 (Drosophila) protein-coding 0.085561 0.579787 -162(CGGCACGA,-,0.00) -57(TCCGCGCA,+,0.00) 561_WT_peak_6293 chr6 33168079 33168404 + 257 NA promoter-TSS (NM_006979) promoter-TSS (NM_006979) 232 NM_021976 6257 Hs.388034 NM_021976 HPRD:01578 RXRB DAUDI6|H-2RIIBP|NR2B2|RCoR-1 retinoid X receptor, beta protein-coding 0.086154 0.644172 -12(GGCGGGCGAG,+,0.00) -31(ATGCCGCT,+,0.00) -106(TCGCCGCC,+,0.00) 138(CGTCGCTC,+,0.00) -145(CGCCGCCGCCGC,-,0.00),-142(CGCCGCCGCCGC,-,0.00),-139(CGCCGCCGCCGC,-,0.00) 561_WT_peak_3906 chr19 56652174 56652578 + 257 NA promoter-TSS (NM_018337) promoter-TSS (NM_018337) -159 NM_001253792 55311 Hs.24545 NM_018337 HPRD:08488 ZNF444 EZF-2|EZF2|ZSCAN17 zinc finger protein 444 protein-coding 0.079208 0.619753 -99(TCCTCCTCCTCC,+,0.00),-96(TCCTCCTCCTCC,+,0.00) 169(AGCCGCCT,-,0.00) -75(TCCCGGCACT,+,0.00) -78(TTTTCCCG,-,0.00) -110(GCCGCCATGGCT,+,0.00),-108(CGCCATGGCTCC,-,0.00) 20(CAGACAGCCCGC,-,0.00) 561_WT_peak_4516 chr2 238907245 238907526 + 257 NA intron (NR_037904, intron 4 of 18) L1ME2|LINE|L1 29950 NM_001278305 140739 Hs.471785 NM_080678 HPRD:14812 UBE2F NCE2 ubiquitin-conjugating enzyme E2F (putative) protein-coding 0.007117 0.343972 561_WT_peak_7442 chr9 131418870 131419560 + 257 NA promoter-TSS (NM_052844) promoter-TSS (NM_052844) -86 NM_052844 89891 Hs.495240 NM_052844 HPRD:15666 WDR34 DIC5|FAP133|SRTD11|bA216B9.3 WD repeat domain 34 protein-coding 0.081159 0.612156 411(TCGAAGCC,+,0.00) -10(TCGTGCGG,+,0.00) 155(CGGTTTTG,-,0.00) 384(ACCGCGCC,+,0.00) -127(CCCCGGCCCCGG,-,0.00) -51(CCCGGCTGCGCG,-,0.00) 128(CTTCTCGG,+,0.00) -140(GCGGCCCTGGCC,+,0.00),-138(GGCCCTGGCCGC,-,0.00),-131(GCCGCCCCGGCC,+,0.00),27(GCCGCCATGAGC,+,0.00),304(GCGGCCGTGGCC,+,0.00) 506(GCTGGGAGGC,+,0.00) -69(CCCGCCTGGCTG,+,0.00) 561_WT_peak_803 chr1 235098937 235099387 + 257 NA Intergenic Intergenic 192090 NR_002956 677802 Hs.744743 NR_002956 SNORA14B ACA14b small nucleolar RNA, H/ACA box 14B snoRNA 0.024444 0.447894 141(AGAGACTT,-,0.00) 224(CAAAACTG,+,0.00) 242(CCTTCCCCTCCC,-,0.00) 561_WT_peak_6213 chr6 27763553 27763851 + 256 NA Intergenic tRNA-Gln-CAA|tRNA|tRNA 12007 NM_003519 8340 Hs.137594 NM_003519 HPRD:11898 HIST1H2BL H2B/c|H2BFC|dJ97D16.4 histone cluster 1, H2bl protein-coding 0.010067 0.404682 -73(CCCACCGA,+,0.00) 91(CAAAACTG,+,0.00) 561_WT_peak_5008 chr3 12705034 12706024 + 256 NA 5' UTR (NM_002880, exon 1 of 17) 5' UTR (NM_002880, exon 1 of 17) 171 NM_002880 5894 Hs.159130 NM_002880 HPRD:01265 RAF1 CMD1NN|CRAF|NS5|Raf-1|c-Raf Raf-1 proto-oncogene, serine/threonine kinase protein-coding 0.095960 0.674067 -64(GACTCCGGGGCC,-,0.00) 429(GGCGGCCCAG,+,0.00) 346(AAGCCGTT,+,0.00),678(AACCGGCT,+,0.00),707(AGAGGCCT,-,0.00) 74(CCGGCTCCCCCG,+,0.00),171(CCTCCTCCCCGC,+,0.00),571(CCCCGCCCCCGG,+,0.00) 478(GCGACGCC,+,0.00) 22(CAGCGCCACCCA,+,0.00) 144(TCGTTCGG,-,0.00),426(TCGGGCGG,-,0.00) -54(CCCCCGCC,-,0.00),4(GCCGCGGG,+,0.00),71(CGCCCGGC,-,0.00),80(CCCCCGGC,-,0.00),178(CCCGCGGC,-,0.00) 192(GGGAGCGGGAGG,+,0.00),720(GGGAGAGGAAGG,+,0.00) 565(CTCAGGCCCCGC,-,0.00) 6(CGCGGGGCCGCT,+,0.00) -90(AACTCGGCTC,-,0.00),10(GGGCCGCTCC,+,0.00) 452(CGACTCGG,+,0.00) 4(GCCGCGGGGC,+,0.00),64(GCCCCGCCGC,-,0.00) 28(CACCCAGGCCCG,-,0.00),62(CAGCCCCGCCGC,-,0.00),120(GAGCCAGGCCGC,-,0.00) 561_WT_peak_5619 chr4 152020280 152021180 + 256 NA promoter-TSS (NM_001006) promoter-TSS (NM_001006) 5 NM_001267699 6189 Hs.356572 NM_001006 HPRD:01606 RPS3A FTE1|MFTL|S3A ribosomal protein S3A protein-coding 0.085556 0.588235 100(AGACGCCT,-,0.00) 646(CCGGCTTGCCGG,+,0.00) 121(CCGACGCC,+,0.00) 299(CCCGTACG,+,0.00),301(CGTACGCC,-,0.00) -142(CCGACCGT,+,0.00) 158(CCCGCGGC,-,0.00) 437(TCGTGGCG,+,0.00),655(CGGCGCGA,-,0.00) 577(CGGTGTTG,-,0.00) 286(GGCGCGCCCCGC,-,0.00) 560(AACGCGGCCT,-,0.00) 537(CGTGGCGG,+,0.00),660(CGACTCGG,+,0.00) 357(CACCATGGCGGT,-,0.00),534(GGCCGTGGCGGG,-,0.00) 563(GCGGCCTGGAGG,+,0.00) 561_WT_peak_6059 chr5 180633793 180634124 + 256 NA Intergenic Intergenic -1665 NM_203293 81786 Hs.487412 NM_033342 HPRD:11648 TRIM7 GNIP|RNF90 tripartite motif containing 7 protein-coding 0.039275 0.515060 -158(CCTTCCACTCCC,-,0.00) 561_WT_peak_388 chr1 113162064 113162937 + 255 NA promoter-TSS (NM_017744) promoter-TSS (NM_017744) 425 NM_006135 829 Hs.744974 NM_006135 HPRD:03347 CAPZA1 CAPPA1|CAPZ|CAZ1 capping protein (actin filament) muscle Z-line, alpha 1 protein-coding 0.061856 0.565217 331(CGGCCCGGCTGC,+,0.00) 303(CCTCCTCCCCCG,+,0.00) -74(TTGGTCGG,-,0.00),125(TTGGTCGG,-,0.00) 328(GCCCGGCCCG,+,0.00) 150(TTCCGACG,-,0.00) 98(CCCGCGCA,+,0.00) -160(GCTGCCGAGC,+,0.00) 192(CCGGCCTGCCTC,+,0.00),330(CCGGCCCGGCTG,+,0.00),512(GGGGCCTCCCTG,+,0.00) 561_WT_peak_6234 chr6 27870571 27870928 + 254 NA Intergenic tRNA-Gly-GGY|tRNA|tRNA 9425 NM_033057 81697 Hs.307111 NM_033057 HPRD:17695 OR2B2 OR2B2Q|OR2B9|OR6-1|dJ193B12.4|hs6M1-10 olfactory receptor, family 2, subfamily B, member 2 protein-coding 0.039216 0.435754 -32(GAACCCGGGCCT,-,0.00) 118(AGGTGGCT,+,0.00) 24(CGCGTACA,+,0.00) 45(CGTCTCTA,+,0.00) 561_WT_peak_3319 chr17 66015880 66016301 + 254 NA Intergenic Intergenic -15758 NM_002266 3838 Hs.594238 NM_002266 HPRD:02818 KPNA2 IPOA1|QIP2|RCH1|SRP1alpha karyopherin alpha 2 (RAG cohort 1, importin alpha 1) protein-coding 0.090261 0.609005 192(GTCGGCCGCC,-,0.00) 72(CTTACGCG,-,0.00) 118(TCGCGCCG,+,0.00) 102(CCCGCGCA,+,0.00) 155(GCGGCGGCGGCG,+,0.00) 218(TGCGCCATGGGC,+,0.00) 158(GCGGCGGCGC,+,0.00) 561_WT_peak_7075 chr8 96281748 96282068 + 254 NA promoter-TSS (NM_177965) promoter-TSS (NM_177965) -446 NM_177965 157657 Hs.548157 NM_177965 HPRD:14104 C8orf37 CORD16|RP64|smalltalk chromosome 8 open reading frame 37 protein-coding 0.046875 0.495327 -120(AGCCGTTT,-,0.00),100(AAGCGTCT,+,0.00) -21(CGGCAGGA,-,0.00) -5(TGCGCGGG,-,0.00) 561_WT_peak_3208 chr17 43661979 43662621 + 253 NA Intergenic CpG 17448 NR_026901 644172 Hs.448859 NR_026901 LOC644172 - mitogen-activated protein kinase 8 interacting protein 1 pseudogene pseudo 0.105919 0.738725 203(GGCGGAGGGAGA,-,0.00) -95(AGGTGGCT,+,0.00),318(AAGCGGTT,+,0.00) -83(CCGCCTCCCCCC,+,0.00),43(CCACCTGCCCGG,+,0.00),226(CCGGGAAGGGGC,-,0.00) 34(GGCGGCGA,-,0.00) 349(TGGCTGGGGCCC,-,0.00) 163(TTGGTCGG,-,0.00) 232(AGGGGCGGGC,-,0.00) -86(CCCCCGCC,-,0.00),-76(CCCCCGGC,-,0.00),151(GCCGCGGG,+,0.00) 228(GGGAAGGGGCGG,+,0.00) 147(GGGAGCCGCGGG,+,0.00) -91(GGCTGCCCCCGC,-,0.00),-50(GTGGGGCCGGCG,+,0.00),119(GCGGGGCCGGGG,+,0.00),178(CGCCGGCCCCTC,-,0.00) 63(CGCGTTGCCGCG,+,0.00) 219(AAAGCGGCCG,-,0.00) 200(CGAGGCGG,+,0.00) 239(GGCGCAATGGGC,+,0.00) 116(GCGGCGGGGC,+,0.00),137(GCTCCGCAGA,-,0.00) 28(CAGCCTGGCGGC,-,0.00) 561_WT_peak_2892 chr16 70473076 70473450 + 253 NA promoter-TSS (NM_006927) promoter-TSS (NM_006927) -272 NM_006927 6483 Hs.368611 NM_006927 HPRD:06220 ST3GAL2 Gal-NAc6S|SIAT4B|ST3GALII|ST3GalA.2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding 0.077540 0.682667 -89(CCTCCCTCCGCC,+,0.00) -74(CGCACGCG,-,0.00) -29(GGTCGCTA,+,0.00) 59(GGGCTCAGGGGG,-,0.00) 70(GTCCGCCG,-,0.00) 86(GGGAGACGGAGG,+,0.00) 561_WT_peak_4771 chr21 34143903 34144624 + 253 NA promoter-TSS (NM_016631) promoter-TSS (NM_016631) -94 NM_016631 94104 Hs.644004 NM_013329 HPRD:10761 PAXBP1 BM020|C21orf66|FSAP105|GCFC|GCFC1 PAX3 and PAX7 binding protein 1 protein-coding 0.080444 0.588643 455(GGAGGAGGAGGA,-,0.00),458(GGAGGAGGAGGG,-,0.00) 486(AAGCGGCT,+,0.00),487(AGCGGCTT,-,0.00) -158(TCGCGTTCCCGC,+,0.00) 1(GAGCTCCAGCCG,+,0.00) -16(CGCACGCG,-,0.00),408(CTTACGCG,-,0.00) 276(TCTGTCGG,-,0.00) -86(CCCGCGGC,-,0.00) -131(TCGTTCCG,+,0.00),-25(TCGTGACG,+,0.00) -113(TTCACCCG,-,0.00) 32(ACCGCGCA,+,0.00),47(AGCGCGCA,+,0.00) -49(ACCGCGGCCC,-,0.00) 561_WT_peak_490 chr1 149605788 149606444 + 253 NA TTS (NR_125392) TTS (NR_125392) 199 NR_125392 101954268 NR_125392 RNVU1-20 RNU1-110|vU1.20 RNA, variant U1 small nuclear 20 snRNA 0.028963 0.439878 370(CGTCTCTA,+,0.00) -94(CGTGTAAA,+,0.00),59(TTTCCCCG,-,0.00) -67(GCGGCGGGGC,+,0.00) 561_WT_peak_753 chr1 226187291 226187784 + 253 NA promoter-TSS (NM_152608) promoter-TSS (NM_152608) -471 NM_152608 163859 Hs.520192 NM_152608 HPRD:08180 SDE2 C1orf55|dJ671D7.1 SDE2 telomere maintenance homolog (S. pombe) protein-coding 0.040568 0.540486 26(AAGCGGTT,+,0.00) -161(AGGCTGGCGCTG,-,0.00) -126(CGTAAGCG,-,0.00) 29(CGGTTTTA,-,0.00) 39(GGGCCGCTTC,+,0.00) -25(CCGAGAAG,-,0.00) 561_WT_peak_1920 chr12 125412289 125412643 + 252 NA Intergenic Intergenic 12373 NR_049820 100847004 NR_049820 miRBase:MI0018167 MIR5188 - microRNA 5188 ncRNA 0.056497 0.529577 -120(AATCGGCT,+,0.00) 168(CCCGCCATGGCC,+,0.00) 561_WT_peak_1741 chr12 58138374 58138703 + 252 NA promoter-TSS (NM_005981) promoter-TSS (NM_005981) -246 NM_005981 6302 Hs.632708 NM_005981 HPRD:01626 TSPAN31 SAS tetraspanin 31 protein-coding 0.042553 0.557576 -34(CCGCCCCTCCCG,-,0.00) -76(GGGCGGAGCC,+,0.00),-49(AGAGCGGCCC,-,0.00) 561_WT_peak_817 chr1 236958642 236959204 + 252 NA 5' UTR (NM_000254, exon 1 of 33) 5' UTR (NM_000254, exon 1 of 33) 342 NM_000254 4548 Hs.498187 NM_000254 HPRD:01136 MTR HMAG|MS|cblG 5-methyltetrahydrofolate-homocysteine methyltransferase protein-coding 0.106762 0.671403 68(GGCGTCAA,-,0.00) 102(CGCCTGGCGCTG,-,0.00) 328(CGCCCGGC,-,0.00) -118(CCGTGCCG,+,0.00),277(TCGTGCTG,+,0.00) -140(CGGTTTTC,-,0.00) 340(TTTCCCCG,-,0.00) -14(GCCGCGCC,+,0.00),163(GCCGCGCC,+,0.00),352(TGGGCGGC,-,0.00) -96(CTCTGGCCGCGC,-,0.00) -107(CGCGACTCCGCC,-,0.00) 47(CCGCGACG,-,0.00) 561_WT_peak_1503 chr11 118661189 118662552 + 252 NA promoter-TSS (NM_001257191) promoter-TSS (NM_001257191) 102 NM_004397 1656 Hs.408461 NM_004397 DDX6 HLR2|P54|RCK DEAD (Asp-Glu-Ala-Asp) box helicase 6 protein-coding 0.089508 0.667155 92(CCGCCTTCCTCC,+,0.00) 688(GAAGTCGGGCCG,-,0.00),1004(GATGCCGGGCCT,-,0.00),1074(CGACCCGGAGAC,+,0.00),1130(GGGCCCGGAGGC,+,0.00) 628(CTCGGCCGCC,-,0.00) 427(CCGGCTCCCCCG,+,0.00),993(CCGGGGAGGCTG,-,0.00) 193(TCGACCCC,+,0.00),489(TCGCCGCC,+,0.00),587(GGCGGCGA,-,0.00) 1023(CGCGTCCG,+,0.00) 88(CCGACCGC,+,0.00),129(CCGCCCGA,+,0.00),415(CCGCCCGA,+,0.00),1124(CCGACCGG,+,0.00) 376(CCCCCGCC,-,0.00),382(CCCCCGCC,-,0.00),433(CCCCCGGC,-,0.00),1086(GCCGGGCG,+,0.00) 17(TCCTGCCG,+,0.00),472(TCGTGGCG,+,0.00),692(TCGGGCCG,+,0.00) 1071(TAGCGACC,-,0.00) 343(CCCACCCAGCCC,+,0.00) -142(CTAAACCG,+,0.00) 424(CCGCCGGCTCCC,-,0.00) 960(GGGACAGGAAGC,+,0.00) 30(GCTGCGCA,+,0.00),1173(TGCGCGGG,-,0.00),1187(TGCGCGGT,-,0.00) 103(CCCAGGCCCGGC,-,0.00),377(CCCCGCCCCCGC,-,0.00),382(CCCCCGCCCCGC,-,0.00),588(GCGGCGACCGCG,+,0.00),1085(CGCCGGGCGCGC,-,0.00) 596(CGCGGCTCCTCC,-,0.00) 507(AACTCGGCTC,-,0.00),1019(GGGCCGCGTC,+,0.00) -94(CCGCCTCG,-,0.00),222(CGACTCGG,+,0.00),812(CCGCGACG,-,0.00) 581(CCGCATGGCGGC,-,0.00) 491(GCCGCCTGGCTG,+,0.00) 561_WT_peak_5754 chr5 54603560 54604106 + 252 NA promoter-TSS (NM_019030) promoter-TSS (NM_019030) 257 NM_015360 23517 Hs.274531 NM_015360 HPRD:13777 SKIV2L2 Dob1|KIAA0052|Mtr4|fSAP118 superkiller viralicidic activity 2-like 2 (S. cerevisiae) protein-coding 0.058608 0.535649 -68(TAGGTCGG,-,0.00),64(TCGGTCGC,-,0.00),291(TCGGTGGG,-,0.00) 561_WT_peak_3305 chr17 62915353 62915852 + 251 NA promoter-TSS (NM_199340) promoter-TSS (NM_199340) -699 NM_199340 374819 Hs.551962 NM_199340 ENSG00000176809 LRRC37A3 LRRC37|LRRC37A leucine rich repeat containing 37, member A3 protein-coding 0.118236 0.736000 -129(GGCGGAGGGAGA,-,0.00) -73(GGCGGCCGGG,+,0.00) -14(AAGCGGTT,+,0.00),46(AGCCGCCA,-,0.00) -106(CCGGGAAGGGGC,-,0.00) -100(AGGGGCGGGC,-,0.00) 266(CCCGCGGC,-,0.00) -104(GGGAAGGGGCGG,+,0.00) 320(CAAAGCCG,+,0.00) 125(GGCGCGGC,-,0.00),205(GGCGCGGC,-,0.00),222(GGCGCGGT,-,0.00) -154(CGCCGGCCCCTC,-,0.00) -113(AAAGCGGCCG,-,0.00) -132(CGAGGCGG,+,0.00) -93(GGCGCAATGGGC,+,0.00) 264(GCCCCGCGGC,-,0.00) 203(GCGGCGCGGCTG,+,0.00) 561_WT_peak_6829 chr7 120590464 120591196 + 251 NA promoter-TSS (NM_019071) promoter-TSS (NM_019071) 13 NM_198267 54556 Hs.489811 NM_019071 HPRD:06321 ING3 Eaf4|ING2|MEAF4|p47ING3 inhibitor of growth family, member 3 protein-coding 0.086066 0.587995 22(AGCCGCCA,-,0.00),169(AAGTGGTT,+,0.00) 429(GCGGGAGGGAGG,-,0.00) 205(GGAGTCGA,-,0.00),504(TCGACCCC,+,0.00) 30(GCGCGCCAACCC,+,0.00) 517(CGCACGCG,-,0.00),533(CGTAAGCG,-,0.00) 445(GGCGGGGG,+,0.00) 356(TGCGCGGC,-,0.00) 257(CCGGCGACAGCG,+,0.00),363(CGCTGGCGGCGG,-,0.00),551(CGTTGGCCCCGC,-,0.00) 315(GGGCCGCGAT,+,0.00) 361(GGCGCTGGCGGC,-,0.00) 561_WT_peak_6826 chr7 117823435 117824589 + 251 NA promoter-TSS (NM_016200) promoter-TSS (NM_016200) -74 NM_016200 51691 Hs.655046 NM_016200 LSM8 NAA38 LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae) protein-coding 0.068458 0.530736 813(GGCGGGCGAG,+,0.00) 383(AAGCGTCT,+,0.00) 741(CCGGGGTCGCGG,-,0.00) 470(CGCACGCG,-,0.00) 760(GCGGTCGG,-,0.00),771(TCGGTGGG,-,0.00) 727(GCCGCGGG,+,0.00) 836(CGGAACGA,-,0.00) 412(CGCTTTTG,-,0.00),915(CAAAACCC,+,0.00) 304(TTTACTCG,-,0.00),651(GTTACCCG,-,0.00) 466(ACTGCGCA,+,0.00) 853(CGCCGGCGGCGC,-,0.00),884(GCGGGCCCAGGG,+,0.00) 437(AACACGGCCC,-,0.00) 546(GCTGCGGAGC,+,0.00) 561_WT_peak_1750 chr12 65563151 65563700 + 250 NA promoter-TSS (NM_001167614) promoter-TSS (NM_001167614) 74 NM_001167614 23592 Hs.744150 NM_014319 HPRD:09704 LEMD3 MAN1 LEM domain containing 3 protein-coding 0.107468 0.663636 313(GGCGGCCGCG,+,0.00) -95(AGGTGGCT,+,0.00),277(AGCCGCCA,-,0.00) 24(CCGGTAGCGCGG,-,0.00) 80(TCGGCGCC,+,0.00) 160(GAGCACCCGCCC,+,0.00) -39(CCCGCGGC,-,0.00),293(GCCGCGGG,+,0.00),317(GCCGCGGG,+,0.00) -33(GCGCTGGGAGGG,-,0.00) 296(GCGGGACCAGCG,+,0.00),305(GCGGCGGCGGCG,+,0.00) 279(CCGCCACG,-,0.00) 278(GCCGCCACGGTC,+,0.00) 561_WT_peak_4579 chr20 23330767 23331175 + 250 NA promoter-TSS (NM_013248) promoter-TSS (NM_013248) -402 NM_013248 29107 Hs.516933 NM_013248 HPRD:16159 NXT1 MTR2|P15 nuclear transport factor 2-like export factor 1 protein-coding 0.078431 0.601467 198(AGCGGCCT,-,0.00),227(AGACGCTA,-,0.00) 139(CGGGACGA,-,0.00) 176(CCTTCCCCTCCC,-,0.00) -26(GGCGCGGC,-,0.00) -25(GCGCGGCCGGCG,+,0.00),48(GCGGGGTCAGGC,+,0.00) -46(CCGCCACG,-,0.00) -8(CTCGCCGTGGCC,+,0.00) 561_WT_peak_5293 chr3 154041879 154042270 + 250 NA exon (NM_001114397, exon 1 of 25) exon (NM_001114397, exon 1 of 25) 212 NM_020865 170506 Hs.446270 NM_020865 HPRD:09918 DHX36 DDX36|G4R1|MLEL1|RHAU DEAH (Asp-Glu-Ala-His) box polypeptide 36 protein-coding 0.066496 0.619898 3(GATGCCGGCCCC,-,0.00),210(GCGTCCGGGCCC,-,0.00),216(GGGCCCGGAAGC,+,0.00) 33(CTCCGCCGCC,-,0.00) -1(CCGGGATGCCGG,-,0.00) -38(CGCGTACC,+,0.00) 44(CCGCCTCCTCCG,-,0.00) -162(CAAAACCA,+,0.00) -67(GCTTCCTTGTTC,-,0.00) 36(CGCCGCCGCCGC,-,0.00),82(TGCTGGCCCCCC,-,0.00) 17(CCGCCTCG,-,0.00) 561_WT_peak_7107 chr8 109260612 109261028 + 249 NA intron (NM_001568, intron 1 of 12) CpG 139 NM_001568 3646 Hs.405590 NM_001568 HPRD:03734 EIF3E EIF3-P48|EIF3S6|INT6|eIF3-p46 eukaryotic translation initiation factor 3, subunit E protein-coding 0.062500 0.525180 -138(CCTCCCTCCTCC,+,0.00) -163(AGAGACTT,-,0.00) -91(CGACGCTA,+,0.00),200(TAGCGCCG,-,0.00) 231(ACTGCGCA,+,0.00) -37(CCGCCTCG,-,0.00) 561_WT_peak_5178 chr3 101292999 101293478 + 249 NA intron (NM_020357, intron 1 of 4) CpG 196 NM_020357 57092 Hs.744968 NM_020357 HPRD:17826 PCNP - PEST proteolytic signal containing nuclear protein protein-coding 0.085595 0.687500 125(GGCTCCGGGCCT,-,0.00) 278(AGCCGCTA,-,0.00) -96(ACGGGAAGGCGG,-,0.00) -149(TCGTGACG,+,0.00) -111(CGGGGAAA,+,0.00) -157(GGGCGGGGTC,+,0.00),52(GGGCGGATCT,+,0.00) 561_WT_peak_3536 chr18 76829344 76829680 + 249 NA exon (NM_198531, exon 1 of 30) exon (NM_198531, exon 1 of 30) 115 NM_198531 374868 Hs.465475 NM_198531 HPRD:16528 ATP9B ATPASEP|ATPIIB|NEO1L|hMMR1 ATPase, class II, type 9B protein-coding 0.127976 0.732938 41(CCCCGTTCCCCG,+,0.00) -108(GCGGTCGG,-,0.00),6(CCGACCGG,+,0.00) -161(AGGGCGGGGA,-,0.00),-123(AGGGGCGGGA,-,0.00) -16(GCCGCGGG,+,0.00),95(GCCGGGCG,+,0.00) 110(GGTCGCTA,+,0.00) -157(CGGGGAAA,+,0.00),-78(TTTACCCG,-,0.00) 1(GGGAGCCGACCG,+,0.00) 89(CCCGGAGCCGGG,+,0.00) 98(GGGCGGGTCT,+,0.00) 27(CGAGGCGG,+,0.00) -16(GCCGCGGGGC,+,0.00) 561_WT_peak_351 chr1 109203477 109204260 + 249 NA promoter-TSS (NM_001102592) promoter-TSS (NM_001102592) -124 NM_001102592 113802 Hs.7962 NM_144584 HPRD:08086 HENMT1 C1orf59|HEN1 HEN1 methyltransferase homolog 1 (Arabidopsis) protein-coding 0.118774 0.665816 438(CGAGCCGGAAGG,+,0.00) 138(CTCGGCCTCC,-,0.00) 36(AGCCGCCA,-,0.00),447(AGGCGGCT,+,0.00) 140(CGGCCTCCCCGC,+,0.00),441(GCCGGAAGGCGG,-,0.00) 247(GGCGTCGG,-,0.00) 74(CGCGCACG,+,0.00),423(CGCGTCCG,+,0.00) 8(CCAACCGA,+,0.00),178(ACGGTCGG,-,0.00) 380(CGGCACGG,-,0.00),471(TCGTGGCG,+,0.00),527(CGGCAAGA,-,0.00) -26(CGTCGCTT,+,0.00) 252(CGGTTTTG,-,0.00) 72(CCCGCGCA,+,0.00),343(GCCGCGCC,+,0.00),455(TGGGCGGC,-,0.00) 350(CGTTGACCCCGC,-,0.00) 31(CGCGGAGCCGCC,+,0.00),109(CGCGGCTACGCC,-,0.00) 57(AGCGCCGCCC,-,0.00) 28(CGTCGCGG,+,0.00),375(CGACGCGG,+,0.00),554(CGAGGCGG,+,0.00) 86(GCCTCGCTGC,-,0.00),371(GCTGCGACGC,+,0.00) 83(ACGGCCTCGCTG,+,0.00) 561_WT_peak_1511 chr11 122619746 122619971 + 249 NA intron (NM_032873, intron 1 of 13) intron (NM_032873, intron 1 of 13) -89397 NM_019604 56253 Hs.159523 NM_019604 HPRD:16760 CRTAM CD355 cytotoxic and regulatory T cell molecule protein-coding 0.008889 0.495575 561_WT_peak_7166 chr8 134581085 134581417 + 249 NA intron (NM_173344, intron 1 of 9) intron (NM_173344, intron 1 of 9) 2932 NM_173344 6482 Hs.374257 NM_003033 HPRD:06219 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding 0.018072 0.570571 -54(CAGGGAAGGGGG,-,0.00) 80(TAGCAACG,-,0.00) 87(GCTTCCTGTTTT,-,0.00) 18(GCTGCAGAGC,+,0.00),127(GCCTCCCAGC,-,0.00) 561_WT_peak_6122 chr6 20534636 20534940 + 249 NA promoter-TSS (NM_017774) promoter-TSS (NM_017774) 100 NM_017774 54901 Hs.657604 NM_017774 HPRD:13022 CDKAL1 - CDK5 regulatory subunit associated protein 1-like 1 protein-coding 0.042763 0.501639 -129(CGTCGCTG,+,0.00) -105(CGTGGCGG,+,0.00) 561_WT_peak_3142 chr17 36452947 36453339 + 249 NA 5' UTR (NM_001278279, exon 1 of 7) 5' UTR (NM_001278279, exon 1 of 7) 154 NM_032351 84311 Hs.537279 NM_032351 HPRD:14764 MRPL45 L45mt|MRP-L45 mitochondrial ribosomal protein L45 protein-coding 0.071429 0.608142 -133(CCACCCTCCCCC,+,0.00),-81(GGCGGAGGGCGC,-,0.00) -30(ATGCGGCT,+,0.00) 8(CTCCCTTCCCGG,+,0.00) -108(CGTGCGCG,-,0.00) 110(TAGGGACG,-,0.00) -1(CACTCTCAGCTC,+,0.00) -103(GCGTCCTCGCTG,+,0.00) 561_WT_peak_1846 chr12 109915283 109915707 + 249 NA promoter-TSS (NM_183415) promoter-TSS (NM_183415) 67 NM_183415 89910 Hs.374067 NM_130466 HPRD:06993 UBE3B BPIDS ubiquitin protein ligase E3B protein-coding 0.068396 0.642353 62(GGGCTGAGACAG,-,0.00) 561_WT_peak_180 chr1 36614956 36615384 + 249 NA promoter-TSS (NR_073098) promoter-TSS (NR_073098) -55 NM_014408 27095 Hs.523131 NM_014408 HPRD:11644 TRAPPC3 BET3 trafficking protein particle complex 3 protein-coding 0.095794 0.687646 235(TCCCCCTCCCCC,+,0.00) -70(AAGCCGCT,+,0.00) -44(CCGACCGG,+,0.00),18(CCGGCCGA,+,0.00) 249(CGCCCGGC,-,0.00) -141(TGGTGCCG,+,0.00) -113(TAGCCACG,-,0.00) -62(GCCCCTCAGCCC,+,0.00) 20(GGCCGACG,-,0.00),50(CGTCAGAC,+,0.00) -49(CAAGACCG,+,0.00) -19(TGCGCGGC,-,0.00) 168(CATCCTGGCCGC,-,0.00) 561_WT_peak_1797 chr12 92987712 92988108 + 248 NA Intergenic L2c|LINE|L2 -108709 NM_001037671 338809 Hs.326303 NM_001037671 ENSG00000214215 C12orf74 - chromosome 12 open reading frame 74 protein-coding 0.007576 0.481108 561_WT_peak_3608 chr19 8766977 8767193 + 248 NA Intergenic Intergenic 42095 NM_178525 284382 Hs.209206 NM_178525 HPRD:14562 ACTL9 - actin-like 9 protein-coding 0.018519 0.516129 40(CGTCTCTA,+,0.00) 561_WT_peak_2693 chr16 10964788 10965276 + 248 NA Intergenic Intergenic -6023 NM_000246 4261 Hs.701991 NM_000246 HPRD:02475 CIITA C2TA|CIITAIV|MHC2TA|NLRA class II, major histocompatibility complex, transactivator protein-coding 0.014344 0.531697 -153(AGACACCT,-,0.00) 135(GCAAGAGGAAGC,+,0.00) 273(AAAGGGGCCC,-,0.00),277(GGGCCCATTT,+,0.00) 561_WT_peak_7211 chr9 7976292 7976696 + 248 NA Intergenic MIRb|SINE|MIR -176695 NM_033428 90871 Hs.7517 NM_033428 HPRD:12939 TMEM261 C9orf123 transmembrane protein 261 protein-coding 0.002475 0.446914 108(AAGCCTCT,+,0.00) 24(TTTACCCA,-,0.00) 561_WT_peak_5374 chr3 196695976 196696333 + 248 NA promoter-TSS (NM_025163) promoter-TSS (NM_025163) -412 NM_025163 80235 Hs.518403 NM_025163 HPRD:18076 PIGZ GPI-MT-IV|PIG-Z|SMP3 phosphatidylinositol glycan anchor biosynthesis, class Z protein-coding 0.117647 0.723464 -50(GGACCCGGAGTG,+,0.00) -104(CTCCGCCGCC,-,0.00) -76(GCGGGAGGTCGG,-,0.00),160(CCGCCACCCCCG,+,0.00) -62(AGGGCAGGGC,-,0.00),-57(AGGGCGGGGA,-,0.00) 100(GCCTGTCAGCCC,+,0.00) -116(CGTGGCGG,+,0.00) -61(GGGCAGGGCGGG,-,0.00) -105(GCTCCGCCGC,-,0.00),40(GCTGCTGAGC,+,0.00),48(GCCCCGCAGC,-,0.00) 561_WT_peak_7644 chrY 10035312 10035554 + 248 NA Intergenic SSU-rRNA_Hsa|rRNA|rRNA 287026 NR_001540 252955 Hs.522846 NR_001540 ENSG00000239225 TTTY23 NCRNA00148|TTTY23B testis-specific transcript, Y-linked 23 (non-protein coding) ncRNA 0.016529 0.444444 -69(TCGAGGCC,+,0.00) -114(CCGACCGG,+,0.00) 561_WT_peak_6233 chr6 27861245 27861902 + 247 NA promoter-TSS (NM_003514) promoter-TSS (NM_003514) 370 NM_003527 8348 Hs.484991 NM_003527 HPRD:11904 HIST1H2BO H2B.2|H2B/n|H2BFN|dJ193B12.2 histone cluster 1, H2bo protein-coding 0.056317 0.550152 -91(CGGCAAGA,-,0.00) 167(GTCCGAGG,-,0.00) 484(CGGTTTTC,-,0.00) -158(CGGCTAAA,+,0.00),342(CGGGAAAA,+,0.00) 561_WT_peak_2507 chr15 63796013 63796908 + 247 NA promoter-TSS (NR_046341) promoter-TSS (NR_046341) -250 NR_046341 9960 Hs.458499 NM_006537 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding 0.092737 0.654018 580(GGCGGGCGAG,+,0.00),650(GTCGGCCGAG,+,0.00) -3(AGGTGGCT,+,0.00) 114(CCGCCTCCCCCG,+,0.00),344(CACCCTTCCCGG,+,0.00),358(CCGGGGAAGCGG,-,0.00),465(CCGGGGGCGGGG,-,0.00) 335(TCGGCGCC,+,0.00) 311(CGCGGACG,+,0.00) 76(TCGGGCGG,-,0.00) 452(GGCGGGGG,+,0.00),660(CGCCCGGC,-,0.00) 446(GGGCTGGGCGGG,-,0.00),474(GGGCGGGGAGGG,-,0.00) -103(GTCCTACG,-,0.00),649(CGTCGGCC,+,0.00) 135(CCTTGGCCTCCC,-,0.00) 123(CCGGGGCCAGGC,+,0.00),352(CCGGGGCCGGGG,+,0.00) 257(CCGAGTAG,-,0.00) 561_WT_peak_6249 chr6 28949860 28950153 + 247 NA Intergenic tRNA-Glu-GAG_|tRNA|tRNA 23031 NM_001010877 282890 Hs.148218 NM_001010877 HPRD:18325 ZNF311 zf31 zinc finger protein 311 protein-coding 0.051195 0.442177 -5(CGGCCCGGGTTC,+,0.00) -130(CGTCGGAA,+,0.00) 561_WT_peak_5915 chr5 132387142 132387921 + 247 NA promoter-TSS (NM_002154) promoter-TSS (NM_002154) -131 NM_002154 3308 Hs.90093 NM_002154 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock 70kDa protein 4 protein-coding 0.082157 0.619231 544(AGAGGCCT,-,0.00) 198(TCGGTTGG,-,0.00) 572(GCCGGGGG,+,0.00) 380(CGTCGCAA,+,0.00) 562(CGCTAGCCCCGC,-,0.00) 366(TGCGGCTCCGCT,-,0.00) -96(AGGCCGCGTT,+,0.00) 12(CCGACACG,-,0.00) 561_WT_peak_2974 chr17 1945230 1945559 + 246 NA exon (NM_080822, exon 1 of 2) exon (NM_080822, exon 1 of 2) 117 NM_080822 124641 Hs.513856 NM_080822 HPRD:07437 OVCA2 - ovarian tumor suppressor candidate 2 protein-coding 0.130699 0.724242 -87(GCTTCCGGTGCT,-,0.00) 93(CCGACCCCCCGG,+,0.00) 52(TCGCGCCG,+,0.00) -73(CGTCGCTC,+,0.00) -99(CGGGGAAA,+,0.00) -49(GCCGCGCA,+,0.00) -49(GCCGCGCAGC,-,0.00) 561_WT_peak_6780 chr7 100472165 100472711 + 246 NA promoter-TSS (NM_015908) promoter-TSS (NM_015908) -263 NM_001128854 51593 Hs.111801 NM_015908 HPRD:10665 SRRT ARS2|ASR2|serrate serrate, RNA effector molecule protein-coding 0.084249 0.586837 346(TCCCCGCCCT,+,0.00) 273(TCGAGCCG,+,0.00) -69(CGGCGGAC,+,0.00) 561_WT_peak_2057 chr13 51483844 51484586 + 246 NA exon (NM_001142279, exon 1 of 10) exon (NM_001142279, exon 1 of 10) 401 NM_001142279 79621 Hs.306291 NM_024570 ENSG00000136104 RNASEH2B AGS2|DLEU8 ribonuclease H2, subunit B protein-coding 0.130728 0.721400 66(TGGGCCTCCTCC,+,0.00) 83(GCTGCCGGTCCC,-,0.00),183(CGCCCCGGAAGA,+,0.00),448(AAACCCGGAAGC,+,0.00) 70(CCTCCTCCCGGG,+,0.00),321(CCGCGACCCCGG,+,0.00),342(CCCCCACCCCGG,+,0.00) -114(TCGGCGCC,+,0.00),214(GGCGTGGA,-,0.00) 233(GGGTTGGCGCCC,-,0.00) 162(CCCGCGGC,-,0.00),240(CGCCCGGC,-,0.00) 188(CGGAAGAGGCGG,+,0.00) 440(CGGTTTTC,-,0.00),447(CAAACCCG,+,0.00) 266(CAGGTAAA,+,0.00) 176(CCTGCGGCGCCC,-,0.00) 102(GCCGCGCC,+,0.00) 224(GCGGGGACGGGG,+,0.00),290(GCGGGGTCGGCC,+,0.00),401(AGCTGGCCCCGC,-,0.00) -151(CGCGGGGCCCCG,+,0.00),-130(CCCCGCTCCGCG,-,0.00),-78(AGCGGAGCCGCG,+,0.00),548(CGCGGGTTCGCG,-,0.00) -137(GACCCCGCCC,-,0.00),313(GGAGCGGCCC,-,0.00) 199(GGCGGCATGGCC,+,0.00),201(CGGCATGGCCGC,-,0.00),280(CGCCCGGGCGGC,-,0.00) 561_WT_peak_5085 chr3 45430052 45430315 + 246 NA intron (NM_015340, intron 1 of 21) CpG 108 NM_015340 23395 Hs.526975 NM_015340 HPRD:05178 LARS2 LEURS|PRLTS4 leucyl-tRNA synthetase 2, mitochondrial protein-coding 0.068441 0.609848 40(AGGGCAGGAA,-,0.00) 5(CCTCTTCCTCCG,-,0.00),50(GGGAAGGTGCGG,+,0.00) -147(CTGTTTTG,-,0.00) -46(CAGGTAAA,+,0.00) -72(AGGAGCCGCAGG,+,0.00) -138(CAACATGGCGGC,-,0.00) 561_WT_peak_1063 chr10 76586350 76586658 + 246 NA 5' UTR (NM_001256468, exon 1 of 18) 5' UTR (NM_001256468, exon 1 of 18) 333 NM_012330 23522 Hs.35758 NM_012330 HPRD:07065 KAT6B GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding 0.097403 0.702265 127(AGGCCTCT,+,0.00) -11(CAGCGCCCCCGG,+,0.00),72(GCGGGAGGGGGG,-,0.00) 111(GCGACGCC,+,0.00) -6(CCCCCGGC,-,0.00) 109(TTGCGACG,-,0.00) 3(GGCGCGGT,-,0.00) -79(GCGGCGGCAGCG,+,0.00) -89(ACCCCTGGCGGC,-,0.00) 561_WT_peak_6917 chr7 156716115 156716480 + 246 NA Intergenic LTR62|LTR|ERVL -26120 NM_138400 64434 Hs.15825 NM_138400 HPRD:18485 NOM1 C7orf3|PPP1R113|SGD1 nucleolar protein with MIF4G domain 1 protein-coding 0.027397 0.502732 87(AGGGCCGGGC,-,0.00) 129(GGGAGGCCAAGG,+,0.00) 133(GGCCAAGGCGGG,-,0.00) 561_WT_peak_616 chr1 171454637 171455282 + 246 NA intron (NM_015172, intron 1 of 33) CpG 293 NM_015172 23215 Hs.494614 NM_015172 HPRD:16539 PRRC2C BAT2-iso|BAT2D1|BAT2L2|XTP2 proline-rich coiled-coil 2C protein-coding 0.069767 0.606811 -136(AGCCGCCA,-,0.00) 7(CCCCTTCTTTCG,-,0.00) 396(CGGGTAAG,+,0.00) 95(GGGCCGCGAT,+,0.00),186(GGGCCGCGTG,+,0.00),296(AGACCCGCCC,-,0.00) 561_WT_peak_7084 chr8 101513970 101514152 + 245 NA Intergenic LTR54|LTR|ERV1 57878 NM_001270378 157567 Hs.530199 NM_198401 HPRD:14103 ANKRD46 ANK-S|GENX-115279 ankyrin repeat domain 46 protein-coding 0.000000 0.437158 561_WT_peak_385 chr1 112298395 112298856 + 245 NA promoter-TSS (NM_198926) promoter-TSS (NM_198926) -206 NM_198926 55924 Hs.193406 NM_019099 HPRD:14246 FAM212B C1orf183 family with sequence similarity 212, member B protein-coding 0.097614 0.666667 228(GGCTTCGA,-,0.00) 168(CCGGCCGA,+,0.00) -149(TCCCGTCCCT,+,0.00),67(TCCCGGCCCC,+,0.00) -124(GCCGGGCG,+,0.00) -102(CGGGAAAA,+,0.00) -157(CCTCCGACTCCC,-,0.00) -24(GGCGCGGC,-,0.00) 162(GCGGAGCCGGCC,+,0.00) 133(CGCGGACCCGCA,+,0.00) -107(CTTCGCGG,+,0.00) -16(TACCATGGCGGC,-,0.00) 561_WT_peak_6574 chr7 2598457 2598749 + 245 NA promoter-TSS (NM_001287500) promoter-TSS (NM_001287500) -3 NM_001287502 23288 Hs.520627 NM_152558 HPRD:11050 IQCE 1700028P05Rik IQ motif containing E protein-coding 0.116438 0.726962 24(AGGTCGCT,+,0.00) -29(CGGCCGGCGCCC,-,0.00) -7(CGCACGCG,-,0.00) -34(TCGGCCGG,-,0.00),44(TAGGTCGG,-,0.00) -83(CCCTCTCAGCCC,+,0.00) -95(CGGTTTTT,-,0.00) 30(CTTACCCG,-,0.00) -146(CCTTAGGCTCCC,-,0.00) -26(CCGGCGCCCGCG,+,0.00),84(CCGGCGCCAGGG,+,0.00) -99(GGGCCGGTTT,+,0.00) 61(TGCCATGGCAGC,-,0.00),116(GGCCAGGGCTGC,-,0.00) 51(GCGGCCTGGTTG,+,0.00) 561_WT_peak_6883 chr7 148638106 148638720 + 244 NA Intergenic Intergenic -56972 NM_001203248 2146 Hs.444082 NM_004456 HPRD:03342 EZH2 ENX-1|ENX1|EZH1|EZH2b|KMT6|KMT6A|WVS|WVS2 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding 0.048860 0.460163 -51(GCCCAGCCCT,+,0.00) -57(CCCGCGGC,-,0.00) -151(GCCACTCAGCCC,+,0.00) 169(TGGTTTTG,-,0.00),364(CACAACCG,+,0.00),387(CTGTTTTG,-,0.00) -61(TTGACCCG,-,0.00) 382(GCTTGCTGTTTT,-,0.00) 23(CCGGAGCCCGCG,+,0.00) -14(CCGGCGAAGC,+,0.00),37(GCTGCGAACC,+,0.00) 561_WT_peak_3224 chr17 46124982 46125474 + 244 NA promoter-TSS (NM_003204) promoter-TSS (NM_003204) -458 NM_003204 4779 Hs.514284 NM_003204 HPRD:01223 NFE2L1 LCR-F1|NRF1|TCF11 nuclear factor, erythroid 2-like 1 protein-coding 0.081301 0.626775 287(CGCGGCCGAG,+,0.00) 278(CCGCGAAGGCGC,-,0.00) 161(GGCGGCGA,-,0.00) -99(CGTCCGCG,-,0.00) 203(CCCCCGCC,-,0.00) 40(CGGCACGA,-,0.00) 49(CGTCGCAA,+,0.00) 285(GGCGCGGC,-,0.00) 279(CGCGAAGGCGCG,+,0.00) 278(CCGCGAAG,-,0.00) 561_WT_peak_7382 chr9 108167740 108168111 + 244 NA Intergenic L1MB5|LINE|L1 -42390 NM_001287191 83856 Hs.136901 NM_031919 HPRD:14641 FSD1L CCDC10|CSDUFD1|FSD1CL|FSD1NL|MIR1 fibronectin type III and SPRY domain containing 1-like protein-coding 0.000000 0.413978 -27(ATGTGGCT,+,0.00) -66(GCTTAGCAGC,-,0.00) 561_WT_peak_2807 chr16 33965471 33965714 + 244 NA Intergenic CpG -3089 NR_038368 649159 Hs.532675 NM_001040069 ENSG00000256642 LINC00273 NCRNA00273|TOP long intergenic non-protein coding RNA 273 ncRNA 0.078189 0.651639 58(CCGCCCTCCTCT,+,0.00) 66(CTCTGCCGCC,-,0.00) -62(CGTCGCTT,+,0.00) 561_WT_peak_4064 chr2 48133938 48134597 + 244 NA Intergenic Intergenic -1335 NM_001190274 80204 Hs.352677 NM_012167 HPRD:06985 FBXO11 FBX11|PRMT9|UBR6|VIT1 F-box protein 11 protein-coding 0.034901 0.448485 -101(GGCGGGGG,+,0.00) 92(TCGTGCCC,+,0.00) -139(TAGCGACG,-,0.00) -24(TTCACCCG,-,0.00) -63(CCTTCGGTTCGC,-,0.00) 561_WT_peak_558 chr1 156186318 156186577 + 243 NA intron (NM_001199664, intron 1 of 4) CpG 3668 NM_001199663 100527963 Hs.530479 NM_001199661 ENSG00000260238 PMF1-BGLAP PMF1 PMF1-BGLAP readthrough protein-coding 0.142857 0.776923 17(GGCGGCCGCG,+,0.00) -143(AGCCGCCT,-,0.00) -40(CGGGGAAGGCGG,-,0.00) -33(GGCGGCGA,-,0.00) -105(CGCGTCCG,+,0.00) 47(CCGTGCCG,+,0.00) 87(GTCCGCCG,-,0.00) -50(CCGGGGGCGGCG,+,0.00) 561_WT_peak_4308 chr2 133039002 133039188 + 243 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA -23553 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo 0.032258 0.534759 -18(TCCACGCC,+,0.00) -89(TTAACCCG,-,0.00) 5(CAGCCAGGCTTC,-,0.00) 561_WT_peak_6692 chr7 66309858 66310378 + 242 NA promoter-TSS (NR_003934) promoter-TSS (NR_003934) -305 NR_003934 729156 Hs.709878 NR_003934 ENSG00000230583 GTF2IRD1P1 - GTF2I repeat domain containing 1 pseusogene 1 pseudo 0.069231 0.596929 106(GGAGAAGGGTGG,-,0.00) -129(CGACCCGGCAGC,+,0.00) 177(GGCGCCGA,-,0.00) -14(TAGCGCCAGGCC,+,0.00) 39(CTGTTTTG,-,0.00) -143(TGCGCGCT,-,0.00) 0(CCGCGTCG,-,0.00) 561_WT_peak_5299 chr3 156877168 156878517 + 242 NA exon (NM_020307, exon 1 of 11) exon (NM_020307, exon 1 of 11) 640 NM_020307 57018 Hs.4859 NM_020307 CCNL1 ANIA6A|PRO1073|ania-6a cyclin L1 protein-coding 0.097850 0.640741 72(CCTCCCTCCGCC,+,0.00) 537(AGGCCCGGACGC,+,0.00) 495(GGCGGCCGAT,+,0.00),1006(GGCGGCCGAC,+,0.00) 506(AGGCGGCT,+,0.00) 156(CCACCCTCCCGG,+,0.00) 215(GAGCGCCCGGCC,+,0.00) 666(CGCGTGCG,+,0.00) 92(CCCCCGCC,-,0.00),218(CGCCCGGC,-,0.00) 4(TTGTGCCG,+,0.00),101(CGGCACGC,-,0.00),464(TCGTCCCG,+,0.00),617(CGGCGCGA,-,0.00) 753(GGCCTGCGAGGG,-,0.00) -162(TTTACCCG,-,0.00) 253(GGCAGCCGGAGG,+,0.00) 728(GCCGCGCC,+,0.00),971(GGCGCGGC,-,0.00) 35(CGCCGCCGCCGC,-,0.00),38(CGCCGCCGCCGC,-,0.00),230(CCGGGGCCGGAG,+,0.00) 697(CGGGCAGCCGCG,+,0.00),730(CGCGCCTCCGCC,-,0.00) 652(GGGCCGCTTC,+,0.00),1106(GGGCTGCTTT,+,0.00) -10(GCGCCGCCGC,-,0.00),82(CCTCCGCAGC,-,0.00) 274(GCGGCCTGGATG,+,0.00),721(CCTCCAGGCCGC,-,0.00) 561_WT_peak_2312 chr14 81685769 81686495 + 242 NA intron (NM_201595, intron 1 of 8) intron (NM_201595, intron 1 of 8) 1164 NM_001278940 2957 Hs.592334 NM_015859 HPRD:02748 GTF2A1 TF2A1|TFIIA|TFIIA-42|TFIIAL general transcription factor IIA, 1, 19/37kDa protein-coding 0.052342 0.511692 -7(GGCGGCCGCG,+,0.00) 385(AGCCGCCA,-,0.00) 533(CGCGGACG,+,0.00) -10(TCGGGCGG,-,0.00) -3(GCCGCGGG,+,0.00) 549(GGGGGGAAGCGG,+,0.00) 26(CGGGCAAA,+,0.00),289(TTTACCCA,-,0.00) -109(GGCAGCCAAAGG,+,0.00) -32(CCGAGTCG,-,0.00) 561_WT_peak_1900 chr12 122240496 122240985 + 242 NA intron (NR_002809, intron 1 of 6) intron (NR_002809, intron 1 of 6) 650 NR_002809 338799 Hs.524804 NR_002809 ENSG00000212694 LINC01089 - long intergenic non-protein coding RNA 1089 ncRNA 0.022495 0.434694 267(CCGCCCTGCTCC,+,0.00) -105(CAAAACTG,+,0.00) 256(GCCGCGCC,+,0.00) 561_WT_peak_7282 chr9 69381632 69381901 + 242 NA promoter-TSS (NM_001098805) promoter-TSS (NM_001098805) -215 NM_001098805 728747 Hs.645502 NM_001098805 ENSG00000172014 ANKRD20A4 - ankyrin repeat domain 20 family, member A4 protein-coding 0.126394 0.737037 30(AACGGCTT,-,0.00) -62(CCGGGAGCCCGG,-,0.00) -107(GAGCTGCAGCCC,+,0.00) 50(TCGGTCTG,-,0.00) -81(CGCCGCTA,+,0.00) 52(GGTCTGAGAGGT,-,0.00) 32(CGGCTTTG,-,0.00) -29(GCGCCGCCAGGG,+,0.00) -157(GCCGCCCGGGCG,+,0.00),-27(GCCGCCAGGGAG,+,0.00) 561_WT_peak_4877 chr22 30752527 30752928 + 242 NA promoter-TSS (NM_001017437) promoter-TSS (NM_001017437) 100 NM_001017437 550631 Hs.505597 NM_001017437 HPRD:18686 CCDC157 - coiled-coil domain containing 157 protein-coding 0.107232 0.679104 193(GGCGGCCGAG,+,0.00) 66(CCGCCTGCACGG,+,0.00),151(CAGCCTCCCCGC,+,0.00) 163(TCGGTCAG,-,0.00),198(CCGAGCGA,+,0.00) 12(GGCGGGGG,+,0.00),56(GGCGGGGG,+,0.00) 85(CGGCATGA,-,0.00) -73(CCCTCCAAGCCC,+,0.00) 170(GTACGACG,-,0.00) -100(AGCGCGCA,+,0.00) 57(GCGGGGGCACCG,+,0.00) 116(CCGCCTCG,-,0.00),213(CCGCGAAG,-,0.00) 108(CTGCCAGTCCGC,-,0.00) 561_WT_peak_3719 chr19 34662747 34663318 + 242 NA promoter-TSS (NM_001114093) promoter-TSS (NM_001114093) -320 NM_015578 26065 Hs.744009 NM_015578 HPRD:12697 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A, SCD6 homolog A (S. cerevisiae) protein-coding 0.080560 0.631119 -3(GAGCCCCAGCTC,+,0.00) 54(TGGAGCCGTAGG,+,0.00) 151(CGAGGGCCCCGC,-,0.00) 291(CACGCGGCCC,-,0.00) 159(CCGCGTCG,-,0.00) 192(GCGGCCACGGCC,+,0.00) 561_WT_peak_4219 chr2 97151606 97152259 + 242 NA Intergenic Intergenic 19190 NM_001285486 93082 Hs.149219 NM_001080535 HPRD:14296 NEURL3 LINCR neuralized E3 ubiquitin protein ligase 3 protein-coding 0.042879 0.593272 375(CGCTTTTG,-,0.00) 455(GCCGCGCC,+,0.00) -124(GGCGCCAGGGGC,+,0.00) 11(GAGCCAGCCCGG,-,0.00) 561_WT_peak_561 chr1 156252330 156252855 + 241 NA promoter-TSS (NR_026678) promoter-TSS (NR_026678) 28 NM_015327 23381 Hs.516837 NM_015327 HPRD:16869 SMG5 EST1B|LPTS-RP1|LPTSRP1|SMG-5 SMG5 nonsense mediated mRNA decay factor protein-coding 0.078095 0.652091 87(CTCGGCCGCC,-,0.00) -91(AAGCCGCT,+,0.00),-90(AGCCGCTT,-,0.00),106(AGGCGGCT,+,0.00) -97(CCGGTAAA,+,0.00) -112(CCCTGGCCCCTC,-,0.00) -116(CACGCCCTGGCC,+,0.00),91(GCCGCCATCGCT,+,0.00) 561_WT_peak_6190 chr6 27099848 27100560 + 240 NA promoter-TSS (NM_021064) promoter-TSS (NM_021064) 371 NM_021058 8970 Hs.591807 NM_021058 HIST1H2BJ H2B/r|H2BFR|H2BJ histone cluster 1, H2bj protein-coding 0.050562 0.493689 433(TCTTGCCG,+,0.00) -158(GACCGACG,-,0.00),175(CCTCGGAC,+,0.00) 561_WT_peak_2045 chr13 49136415 49136886 + 240 NA Intergenic Intergenic 18387 NR_051983 100129597 Hs.175225 NR_051983 ENSG00000233610 LINC00462 - long intergenic non-protein coding RNA 462 ncRNA 0.008493 0.402542 -29(TAGTCGCT,+,0.00),-28(AGTCGCTT,-,0.00) 161(ACCTCTCTGCCC,+,0.00) 561_WT_peak_7127 chr8 123793912 123794762 + 240 NA intron (NM_014943, intron 1 of 3) CpG-25975 436 NM_014943 22882 Hs.377090 NM_014943 HPRD:16458 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding 0.080000 0.593420 408(GGAGGAGGAGGA,-,0.00),411(GGAGGAGGAGGA,-,0.00),414(GGAGGAGGAGGA,-,0.00),417(GGAGGAGGAGGA,-,0.00) 66(CCGCGTTCCCAG,+,0.00) 215(TCGCCGCC,+,0.00) 96(CAGCCCCAGCGC,+,0.00) -84(CGTACGGG,-,0.00) -12(GCCGGGCG,+,0.00),172(GCCGGGCG,+,0.00),641(GGCGGGGG,+,0.00) 53(CCGTGCCG,+,0.00) 259(CGGGTTTG,-,0.00) 142(AGCCGGCGCCGC,-,0.00),210(CGCCGTCGCCGC,-,0.00) 59(CGCGTCTCCGCG,-,0.00),129(CGCGGAGCCCCC,+,0.00),619(CCCGTCTCCGCG,-,0.00) 208(GCCGCCGTCGCC,+,0.00) 135(GCCCCCCAGC,-,0.00) 561_WT_peak_2478 chr15 50716119 50716736 + 240 NA promoter-TSS (NM_005154) promoter-TSS (NM_005154) -147 NM_005154 9101 Hs.443731 NM_005154 HPRD:04405 USP8 HumORF8|SPG59|UBPY ubiquitin specific peptidase 8 protein-coding 0.071313 0.566343 240(CGCACGCG,-,0.00) 185(CCCGCGGC,-,0.00),415(CGCCCGGC,-,0.00) 101(TTGACCCG,-,0.00),305(CGGGAAAA,+,0.00) 136(ACCGCCCA,+,0.00) 33(CCCAGGCGCCGC,-,0.00),178(CCCTCGCCCCGC,-,0.00),412(GCGCGCCCGGCG,+,0.00) 244(CGCGAAGCCCCG,+,0.00) 118(AACCCCGCCC,-,0.00),249(AGCCCCGCCC,-,0.00) 183(GCCCCGCGGC,-,0.00) 561_WT_peak_4587 chr20 25038744 25039344 + 240 NA promoter-TSS (NM_001252675) promoter-TSS (NM_001252675) -226 NM_001252677 84532 Hs.529353 NM_032501 HPRD:12413 ACSS1 ACAS2L|ACECS1|AceCS2L acyl-CoA synthetase short-chain family member 1 protein-coding 0.065000 0.692180 -47(GCCCCCTCCCGG,+,0.00),281(CCGGGAGGGAGC,-,0.00) 310(GGGCTGGTGCAC,-,0.00) 350(TAGGTCGG,-,0.00),354(TCGGTCAG,-,0.00) 293(CGGCACCA,-,0.00) -1(CGGGAGAGGGGG,+,0.00) 145(CTGTTTTG,-,0.00) -97(CGCGGGCCCCGC,-,0.00),-96(GCGGGCCCCGCC,+,0.00),82(CCCTGGCCCAGG,-,0.00) 10(GGGCCGCTTA,+,0.00) 136(CGAGTCGG,+,0.00) 561_WT_peak_608 chr1 167905413 167906246 + 240 NA promoter-TSS (NM_018442) promoter-TSS (NM_018442) 32 NM_018442 55827 Hs.435741 NM_018442 HPRD:17156 DCAF6 1200006M05Rik|ARCAP|IQWD1|MSTP055|NRIP|PC326 DDB1 and CUL4 associated factor 6 protein-coding 0.067227 0.624700 285(TCCGCCTCCGCC,+,0.00),291(TCCGCCTCCTCC,+,0.00),514(TCCCCCTCCTCC,+,0.00) 148(TGGCCCGAATGC,+,0.00) 124(AGCGACTT,-,0.00) -123(GGGGTCGA,-,0.00),-86(TCGAGGCC,+,0.00),655(GGAGTCGA,-,0.00) 381(GAGCTCCGGCCC,+,0.00) 475(TGGTGCCG,+,0.00) 123(TAGCGACT,-,0.00) 313(GGGCTGAGGGAG,-,0.00) 415(CCCAGGCGCCGC,-,0.00) -127(GGGCGGGGTC,+,0.00) 273(GTCGCCATCGCC,+,0.00) 386(CCGGCCCGGGTG,+,0.00),397(GCGGCCGGGCTT,+,0.00),642(CCGTCCCGGCTG,+,0.00) 561_WT_peak_4725 chr20 62339158 62339472 + 239 NA promoter-TSS (NM_001267546) promoter-TSS (NM_001267546) 50 NM_001267545 10139 Hs.389277 NM_003224 HPRD:05264 ARFRP1 ARL18|ARP|Arp1 ADP-ribosylation factor related protein 1 protein-coding 0.149682 0.768254 -152(CTGGGCCGCC,-,0.00) 24(AGCGGCCT,-,0.00) 74(CGGAAGCGGCGG,+,0.00) -99(GTCCGCCG,-,0.00) -95(GCCGCGCC,+,0.00) -53(CGCTGACCCCGC,-,0.00),48(GGCTGCCCCCGC,-,0.00) -87(CTCGGAGCCGCT,+,0.00) 134(GGGCCGCTCT,+,0.00) 17(GCGTCCCAGC,-,0.00),41(GCTTCCCGGC,-,0.00),79(GCGGCGGCGC,+,0.00) -112(GCGGCCTACCTG,+,0.00),129(GCGCCGGGCCGC,-,0.00) 561_WT_peak_219 chr1 45805568 45806276 + 238 NA promoter-TSS (NM_001048174) promoter-TSS (NM_001048174) -134 NM_001293196 4595 Hs.271353 NM_012222 HPRD:05380 MUTYH MYH mutY homolog protein-coding 0.094633 0.636107 -13(CGAGCCGGCAGC,+,0.00) 248(AGCGGCTT,-,0.00),273(AAGCCTCT,+,0.00) -121(CCGCGTTCCCGC,+,0.00),30(CTGCCTTCCCCG,+,0.00) -162(CCCGCGGC,-,0.00),-66(CGCCCGGC,-,0.00) 230(CCGCAGCTTCCG,-,0.00),344(CTGCTCCTTCCG,-,0.00) 363(TAGCCACG,-,0.00) 42(CGCCGGAC,+,0.00),237(TTCCGACG,-,0.00) 124(ACCGCGCC,+,0.00) -129(CGGAGGCCCCGC,-,0.00) 397(CGCGGCTCCGGC,-,0.00) 97(GACCCCGCCC,-,0.00) 447(AGGCATGGCGGG,-,0.00) -17(GCTGCGAGCC,+,0.00) 561_WT_peak_4280 chr2 120980440 120981194 + 238 NA 5' UTR (NM_024121, exon 1 of 1) 5' UTR (NM_024121, exon 1 of 1) 167 NM_024121 79134 Hs.376722 NM_024121 TMEM185B FAM11B transmembrane protein 185B protein-coding 0.131300 0.740397 28(CCGCCTCCCGGG,+,0.00),383(CCTCCCTGCCGG,+,0.00),478(TCGCCTCCCCGC,+,0.00),497(GCGGCTTCCCGG,+,0.00),505(CCGGGAACCCGC,-,0.00) 288(GGCCTGGCGCGC,-,0.00) -30(GCCCGGGCCT,+,0.00),431(AGGGCGGGGC,-,0.00) 73(CGGGACGA,-,0.00) -14(TCGCGACG,-,0.00) 423(GGGTGGAGAGGG,-,0.00) 276(GGGGCCCGAAGG,+,0.00) 188(GGCGCGGC,-,0.00) 34(CCCGGGCCCCGC,-,0.00),49(AGCCGGCTCCGC,-,0.00),400(GCGGGCCCTGCG,+,0.00),409(GCGGGGGCGGGG,+,0.00),415(GCGGGGCCGGGT,+,0.00),434(GCGGGGCCTGGG,+,0.00) 3(CGCGTCTCCGCG,-,0.00),50(GCCGGCTCCGCG,-,0.00),496(CGCGGCTTCCCG,-,0.00) 311(CAAGCGGCCC,-,0.00),509(GAACCCGCCC,-,0.00) -127(CCGAGAAG,-,0.00) 98(GCGGCGAAGC,+,0.00) 286(GGGGCCTGGCGC,+,0.00),436(GGGGCCTGGGCG,+,0.00) 561_WT_peak_3992 chr2 26407379 26407775 + 238 NA exon (NM_001191033, exon 3 of 6) exon (NM_001191033, exon 3 of 6) 3992 NM_001191033 150946 Hs.187912 NM_001168241 ENSG00000157833 GAREML FAM59B GRB2 associated, regulator of MAPK1-like protein-coding 0.123737 0.707809 180(CGCGTCGA,-,0.00) 78(GGGCTGGCGCTG,-,0.00) -112(CACTCGCAGCCC,+,0.00) -7(GCCGCGCA,+,0.00) 85(CGCTGCGCCGCG,+,0.00),85(CGCTGCGCCGCG,-,0.00),170(CGGGGACCCGCG,+,0.00) -124(GGGCCGCTTC,+,0.00) 91(GCCGCGAGGGCC,+,0.00) 86(GCTGCGCCGC,+,0.00),86(GCTGCGCCGC,-,0.00) 561_WT_peak_7544 chrX 48931695 48931988 + 238 NA promoter-TSS (NM_007213) promoter-TSS (NM_007213) -137 NM_007213 11230 Hs.29595 NM_007213 HPRD:06596 PRAF2 - PRA1 domain family, member 2 protein-coding 0.081911 0.622449 -71(GGCGGCGA,-,0.00) 61(GGGCGCCGCAGG,+,0.00) 84(GCGGTGCCAGCG,+,0.00) -110(GGGCAGCTTT,+,0.00) -70(GCGGCGATGC,+,0.00) 561_WT_peak_692 chr1 204485356 204485806 + 237 NA promoter-TSS (NM_001204172) promoter-TSS (NM_001204172) 74 NM_001278517 4194 Hs.497492 NM_002393 HPRD:04082 MDM4 HDMX|MDMX|MRP1 MDM4, p53 regulator protein-coding 0.080000 0.656319 229(TGGGTCGG,-,0.00),233(TCGGGCGG,-,0.00) 86(GGCGGGGG,+,0.00) -2(CGGAAGTTGCGG,+,0.00) 251(GCCGCGCC,+,0.00) 87(GCGGGGGAGC,+,0.00) 561_WT_peak_3850 chr19 49631086 49631361 + 237 NA non-coding (NR_103842, exon 2 of 29) non-coding (NR_103842, exon 2 of 29) 8577 NR_103842 8541 Hs.413748 NM_003660 HPRD:04393 PPFIA3 LPNA3 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 protein-coding 0.127273 0.728261 -8(GAGCGCGAGCGC,+,0.00),91(CAGCGCCAGCTC,+,0.00) -151(CCCTCCCCGCCC,+,0.00) -67(CGCTGGGCCCGG,-,0.00) -77(CGGGGCTCGGCG,-,0.00),53(TGCGGCTGCGCG,-,0.00) -54(CGAGGCGG,+,0.00) -125(GCCGCCATGATG,+,0.00) 561_WT_peak_2271 chr14 70826178 70826617 + 237 NA promoter-TSS (NM_016468) promoter-TSS (NM_016468) 51 NM_001204090 51241 Hs.709581 NM_016468 HPRD:16591 COX16 C14orf112 COX16 cytochrome c oxidase assembly homolog (S. cerevisiae) protein-coding 0.059226 0.520455 46(CGAGTACG,+,0.00) 179(CGTTTTTG,-,0.00) -5(GCGGGCCTAGCG,+,0.00) 561_WT_peak_1678 chr12 49075597 49076130 + 236 NA intron (NM_017822, intron 1 of 9) CpG 172 NM_017822 54934 Hs.505412 NM_017822 HPRD:07907 KANSL2 C12orf41|NSL2 KAT8 regulatory NSL complex subunit 2 protein-coding 0.080675 0.629213 -41(CCGCCTCCCCGC,+,0.00) -86(CAGCACGA,-,0.00) 46(GTCCTACG,-,0.00) 48(CCTACGGCTCCA,-,0.00) 236(GCCGCGCC,+,0.00) 259(GTGGCGCCAGCG,+,0.00) 221(GCTGCGCCGC,+,0.00),221(GCTGCGCCGC,-,0.00) -49(CGGCCACGCCGC,-,0.00),-15(CCGGCCTGCCTC,+,0.00) 561_WT_peak_5320 chr3 170587668 170588278 + 236 NA promoter-TSS (NM_001099645) promoter-TSS (NM_001099645) 72 NM_001099645 200916 Hs.380933 NM_001099645 ENSG00000163584 RPL22L1 - ribosomal protein L22-like 1 protein-coding 0.077049 0.569558 -109(AATTCCGGGCCC,-,0.00) 375(AGCCGATT,-,0.00),408(TAGTGGCT,+,0.00) 431(CGCACGCG,-,0.00) 202(GCGCTGAGAGCG,-,0.00) -130(CAAAACCA,+,0.00) 129(CGAGTCGG,+,0.00) 561_WT_peak_5043 chr3 28368045 28368379 + 236 NA intron (NM_001271650, intron 8 of 8) intron (NM_001271650, intron 8 of 8) 22406 NM_001134433 64343 Hs.706676 NM_022461 HPRD:10577 AZI2 AZ2|NAP1|TILP 5-azacytidine induced 2 protein-coding 0.005988 0.402985 95(CCGGTAAA,+,0.00) 561_WT_peak_5307 chr3 160167709 160168014 + 236 NA promoter-TSS (NM_173084) promoter-TSS (NM_173084) -235 NM_173084 286827 Hs.212957 NM_173084 HPRD:15568 TRIM59 MRF1|RNF104|TRIM57|TSBF1 tripartite motif containing 59 protein-coding 0.098361 0.669935 -91(AGGCTGGCGCCC,-,0.00),80(GGCCTGGCGCGG,-,0.00) -122(CGGCCCGA,-,0.00),89(CGGGACGA,-,0.00) 111(GGCCGACG,-,0.00) -126(GGCGCGGC,-,0.00) -126(GGCGCGGCCC,-,0.00) -31(GCCTCGCAGG,-,0.00) 561_WT_peak_6120 chr6 20402118 20402446 + 236 NA 5' UTR (NM_001949, exon 1 of 7) 5' UTR (NM_001949, exon 1 of 7) 145 NM_001949 1871 Hs.269408 NM_001949 HPRD:02693 E2F3 E2F-3 E2F transcription factor 3 protein-coding 0.079268 0.583587 -51(GGGCCCGATATC,+,0.00),56(GGGCTCGGAAGC,+,0.00) -84(ATCGGCCGCC,-,0.00) 93(AGAGACTT,-,0.00) -67(CCTCCATCCCCG,+,0.00) -73(CCGACGCC,+,0.00) -115(GGGCTGCCGCCG,-,0.00) 68(GCCGGGCG,+,0.00) -103(CCGCCTCG,-,0.00) 561_WT_peak_1937 chr12 133841602 133841950 + 236 NA Intergenic (TTAGGG)n|Simple_repeat|Simple_repeat -29354 NM_001191054 647589 Hs.703008 NM_001191054 ENSG00000227059 ANHX - anomalous homeobox protein-coding 0.000000 0.500000 561_WT_peak_238 chr1 52870183 52870670 + 236 NA promoter-TSS (NM_004153) promoter-TSS (NM_004153) 207 NM_032864 84950 Hs.5301 NM_032284 PRPF38A Prp38 pre-mRNA processing factor 38A protein-coding 0.061602 0.524590 -121(AGCCGCCA,-,0.00) 150(CGAACGCG,-,0.00) 44(CCGACGGA,+,0.00),256(CTGACCGA,+,0.00) 277(TAGCGACT,-,0.00) 226(GCCTCTCAGCCC,+,0.00) 42(ATCCGACG,-,0.00) -90(GGGAGCGGAAGC,+,0.00) -97(CGACGCGG,+,0.00) 226(GCCTCTCAGC,-,0.00) 561_WT_peak_5722 chr5 43040342 43040711 + 235 NA promoter-TSS (NM_001014279) promoter-TSS (NM_001014279) -79 NM_001014279 389289 Hs.529385 NM_001014279 ANXA2R AX2R|AXIIR|C5orf39 annexin A2 receptor protein-coding 0.065041 0.494595 -148(CCGACAGA,+,0.00) 114(CCGTTTTG,-,0.00) 147(GAAACAGCATGC,+,0.00) -54(AGCGCGCA,+,0.00) 561_WT_peak_4306 chr2 133038194 133038400 + 235 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA -22755 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo 0.033981 0.570048 25(GCCCTGCCCT,+,0.00) 22(GGCGCCCTGCCC,+,0.00) 561_WT_peak_6270 chr6 30875770 30876060 + 235 NA promoter-TSS (NM_001517).2 promoter-TSS (NM_001517).2 -62 NM_001517 2968 Hs.485070 NM_001517 HPRD:03456 GTF2H4 P52|TFB2|TFIIH general transcription factor IIH, polypeptide 4, 52kDa protein-coding 0.044828 0.546392 -59(GTCAGACG,-,0.00) -95(CTTTCGGCTTCC,-,0.00) -161(CTTCGCGG,+,0.00) 561_WT_peak_493 chr1 149804017 149805002 + 235 NA exon (NM_001034077, exon 1 of 1) exon (NM_001034077, exon 1 of 1) 288 NM_001034077 554313 Hs.55468 NM_001034077 ENSG00000182217 HIST2H4B H4/o histone cluster 2, H4b protein-coding 0.064975 0.530426 -107(GGAGGAGGAGGG,-,0.00),-104(GGAGGAGGGAGA,-,0.00) 376(CTAGGCCGCC,-,0.00) 200(AAGCGGAT,+,0.00),596(AAGCGGCT,+,0.00),597(AGCGGCTT,-,0.00) 174(GGCGTCTA,-,0.00) 330(TGTACGCG,-,0.00) -60(AGGGCGGGGA,-,0.00) -19(CGGTTTTC,-,0.00),304(CAAGACCG,+,0.00) -148(CGGTTAAA,+,0.00) 547(ACCGCGGCCC,-,0.00) 188(CGTGGCGG,+,0.00) 185(CGGCGTGGCGGC,-,0.00) 561_WT_peak_3686 chr19 19029869 19030220 + 234 NA promoter-TSS (NM_019070) promoter-TSS (NM_019070) 155 NM_199442 11316 Hs.10326 NM_007263 HPRD:06089 COPE epsilon-COP coatomer protein complex, subunit epsilon protein-coding 0.102564 0.630682 -45(TCCGCCTCCGCC,+,0.00) 108(GGGGCCGGAGGC,+,0.00) 104(GCCGGGGG,+,0.00) 61(CGTCGAAC,+,0.00) 0(TTCACCCG,-,0.00) 107(GGGGGCCGGAGG,+,0.00) -14(TGCGCGGC,-,0.00) 99(GCCGGGCCGGGG,+,0.00) 83(CCCGGAGCCGCC,+,0.00) -75(AACGCGGCTC,-,0.00) 561_WT_peak_4803 chr21 42733861 42734364 + 234 NA intron (NM_002463, intron 1 of 13) intron (NM_002463, intron 1 of 13) 162 NM_002463 4600 Hs.926 NM_002463 HPRD:01001 MX2 MXB MX dynamin-like GTPase 2 protein-coding 0.025845 0.531746 59(ATGTGGCT,+,0.00),181(AAGTGGCT,+,0.00) 184(TGGCTGGCCCTG,-,0.00) -125(AGGGGAGGGA,-,0.00) -36(GCGGGGCCGGTG,+,0.00) -18(GGGCTGCTTT,+,0.00) 325(CGTCTCGG,+,0.00) 70(GCTGGGAGGC,+,0.00) 561_WT_peak_1022 chr10 70090921 70092659 + 234 NA promoter-TSS (NM_012207) promoter-TSS (NM_012207) 22 NM_021644 3189 Hs.643472 NM_012207 HPRD:03818 HNRNPH3 2H9|HNRPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) protein-coding 0.075949 0.602070 195(AGAGCCGAAATC,+,0.00) 760(AAGCGGTT,+,0.00) 1055(CAGGGAGGGCGG,-,0.00) 334(GCCGTCGA,-,0.00),338(TCGATGCC,+,0.00),1106(ACGACGCC,+,0.00),1536(GGCGACGA,-,0.00) 351(AGGGCGGGGC,-,0.00) 1369(GCCGGGCG,+,0.00) 419(CGGCACGG,-,0.00),617(GCGTGCCG,+,0.00) 1535(TGGCGACG,-,0.00) 716(CCCTCCCATCCC,+,0.00) -29(CGTCGGCC,+,0.00) -109(CAAAACCA,+,0.00),636(CGAAACCG,+,0.00),1362(CGGGTTTG,-,0.00) 528(TGCGCGCT,-,0.00),586(GCTGCGCA,+,0.00),601(ACCGCGCA,+,0.00),745(GCTGCGCA,+,0.00),747(TGCGCAGC,-,0.00),1188(GGCGCGGC,-,0.00) 663(GTGGGGCCGGCC,+,0.00) 603(CGCGCAGGCGCG,+,0.00) 202(AAATCGGCCC,-,0.00),287(AAATCCGCCC,-,0.00) 228(CTTCGCGG,+,0.00),467(CGAGGCGG,+,0.00) 347(AGCCAGGGCGGG,-,0.00),621(GCCGCCAGCGCC,+,0.00) 745(GCTGCGCAGC,+,0.00),745(GCTGCGCAGC,-,0.00),1019(GCGGCGGGGC,+,0.00) 1019(GCGGCGGGGCTG,+,0.00) 561_WT_peak_6136 chr6 26021740 26022392 + 234 NA TTS (NM_003529) TTS (NM_003529) 159 NM_003538 8359 Hs.248178 NM_003538 HPRD:04157 HIST1H4A H4FA histone cluster 1, H4a protein-coding 0.055215 0.539051 135(AAGCGGAT,+,0.00) -109(TGCGCGCT,-,0.00),367(GCCGCCCA,+,0.00) 123(CGTGGCGG,+,0.00) 561_WT_peak_1730 chr12 56862268 56862581 + 233 NA exon (NM_207344, exon 1 of 2) exon (NM_207344, exon 1 of 2) 123 NM_207344 283377 Hs.128676 NM_207344 HPRD:11251 SPRYD4 - SPRY domain containing 4 protein-coding 0.063898 0.589172 -152(CGCGGCCGCC,-,0.00) -26(TTGTGCCG,+,0.00) -15(GGGAGCCAAACG,+,0.00) -154(TGCGCGGC,-,0.00) 96(CCGAGAAG,-,0.00) -19(GCTGGGGAGC,+,0.00) 561_WT_peak_287 chr1 70819780 70820434 + 233 NA promoter-TSS (NM_001036645) promoter-TSS (NM_001036645) 310 NM_030816 81573 Hs.744989 NM_030816 HPRD:13176 ANKRD13C dJ677H15.3 ankyrin repeat domain 13C protein-coding 0.082569 0.658015 -62(GGAGGAGGCCGG,-,0.00) 147(TCGCCGCC,+,0.00) 199(GAGCTGGCGCTG,-,0.00) -133(AGGGCCGGGG,-,0.00) -74(GCCGGGGG,+,0.00) -147(TGGTGCCG,+,0.00),214(CGGCACAA,-,0.00),326(AGGCACGA,-,0.00) 191(TGGCGACG,-,0.00),412(CGTCGCTG,+,0.00) 266(CCCACTGAGCCC,+,0.00) 29(CTGGTAAA,+,0.00) 152(GCCGCCAGGGGC,+,0.00) 2(GCTTTGCCGC,-,0.00),399(CCGTCGCAGC,-,0.00) 561_WT_peak_3002 chr17 5389825 5390282 + 233 NA promoter-TSS (NM_016041) promoter-TSS (NM_016041) -160 NM_024039 79003 Hs.267194 NM_024039 HPRD:12379 MIS12 2510025F08Rik|KNTC2AP|MTW1|hMis12 MIS12 kinetochore complex component protein-coding 0.102845 0.646288 75(AAGCGTCT,+,0.00) -102(TCAGTCGG,-,0.00),106(TGGGTCGG,-,0.00),167(CCGACGGA,+,0.00) 165(GCCCGACG,-,0.00) -79(ACCGCGCC,+,0.00) 160(GCGGGGCCCGAC,+,0.00) -116(CGCCGAGGCGCG,+,0.00) 22(GCTGCGGGGC,+,0.00) 561_WT_peak_5289 chr3 150920780 150921155 + 233 NA promoter-TSS (NM_013308) promoter-TSS (NM_013308) 21 NM_013308 29909 Hs.549152 NM_013308 HPRD:17071 GPR171 H963 G protein-coupled receptor 171 protein-coding 0.008000 0.348404 561_WT_peak_6811 chr7 106408098 106408377 + 233 NA Intergenic LTR62|LTR|ERVL -97486 NM_001282426 5294 Hs.32942 NM_002649 HPRD:03135 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma protein-coding 0.010753 0.378571 561_WT_peak_1941 chr13 20531566 20532583 + 233 NA promoter-TSS (NM_001190965) promoter-TSS (NM_001190965) -736 NM_003453 7750 Hs.507433 NM_003453 HPRD:03745 ZMYM2 FIM|MYM|RAMP|SCLL|ZNF198 zinc finger, MYM-type 2 protein-coding 0.094395 0.699411 -41(CCGCCCTCCTCG,+,0.00),488(GGAGGTGGGGGA,-,0.00) -33(CTCGGGCGCC,-,0.00) -164(AGCGACAT,-,0.00),112(AGAGGCCT,-,0.00) 606(GCGCCTCCCCGG,+,0.00) 667(GGCATCGA,-,0.00),671(TCGAGGCC,+,0.00) 310(CGCGGACG,+,0.00) 551(GCGGTCGG,-,0.00) 390(TCCCGGCCCC,+,0.00) 4(CCCCCGGC,-,0.00) 288(TCGTGCCC,+,0.00),438(TCGTTCCG,+,0.00) -2(CCGCTCCCCCCG,-,0.00) -110(GTCCGCCG,-,0.00) 567(TTCACCCG,-,0.00) 805(AGGAGCCGAAGC,+,0.00) 513(GGCGCGGC,-,0.00) -10(CCCTGACTCCGC,-,0.00),122(GCAGGGCCAGCG,+,0.00),301(CTGTGGCCCCGC,-,0.00),514(GCGCGGCGAGGG,+,0.00) 259(CGGGGAGCTGCG,+,0.00) 476(GCAGCCATGGCG,+,0.00),478(AGCCATGGCGGG,-,0.00) 140(GCTGCGGAGC,+,0.00) 669(CATCGAGGCCGC,-,0.00),717(GCGGCCTGGGCG,+,0.00) 561_WT_peak_1782 chr12 82751927 82752642 + 233 NA promoter-TSS (NM_032230) promoter-TSS (NM_032230) 8 NM_032230 84190 Hs.506222 NM_032230 HPRD:10979 METTL25 C12orf26 methyltransferase like 25 protein-coding 0.069930 0.600559 151(GAATCCGGCTCG,-,0.00) 255(TGGCGGCT,+,0.00) 47(CCGCCTCACCGG,+,0.00) -86(CGCGAACG,+,0.00) 464(GCCCTGCCCT,+,0.00) 97(CGACGGAC,+,0.00),450(CGTCGGAG,+,0.00) -17(TGTACCCG,-,0.00) 193(GGGCCGAGCT,+,0.00) 38(CTTCGCGG,+,0.00) -50(GCCGCCATGTCT,+,0.00),250(CGTCATGGCGGC,-,0.00) 24(CCACCAGGCCGC,-,0.00) 561_WT_peak_3762 chr19 39935736 39936248 + 233 NA promoter-TSS (NM_001130825) promoter-TSS (NM_001130825) -194 NM_001130824 6829 Hs.631604 NM_003169 HPRD:03655 SUPT5H SPT5|SPT5H|Tat-CT1 suppressor of Ty 5 homolog (S. cerevisiae) protein-coding 0.072266 0.559454 93(AAACGGCT,+,0.00) 40(TCGCCGCC,+,0.00),327(GGCGTCGT,-,0.00) -48(CAAAACGG,+,0.00) 143(CGGGTAGA,+,0.00) 133(GCCGAGCCGGCG,+,0.00) 123(CAGCCTGGTCGC,-,0.00) 561_WT_peak_4499 chr2 234176562 234176879 + 232 NA intron (NM_017974, intron 5 of 16) intron (NM_017974, intron 5 of 16) -7652 NR_003008 677775 Hs.663619 NR_003008 SCARNA5 U87 small Cajal body-specific RNA 5 ncRNA 0.009464 0.547170 92(AGGGCTGGGC,-,0.00) -3(CTGTTTTG,-,0.00) -27(TTTACCTG,-,0.00) 134(GGGAGGCCAAGG,+,0.00) -51(TCTTCCTGCTTC,-,0.00) 561_WT_peak_2115 chr14 21101021 21101468 + 232 NA Intergenic Intergenic 8606 NM_001001968 341799 Hs.513132 NM_001001968 HPRD:17779 OR6S1 OR14-37|OR6S1Q olfactory receptor, family 6, subfamily S, member 1 protein-coding 0.046980 0.466518 115(CGGCGCTA,+,0.00) -95(CAAAACTG,+,0.00) 224(GCTGCGAAGG,+,0.00) 561_WT_peak_165 chr1 33722539 33722967 + 232 NA intron (NM_152493, intron 1 of 8) intron (NM_152493, intron 1 of 8) 579 NM_152493 149076 Hs.743358 NM_152493 HPRD:13394 ZNF362 RN|lin-29 zinc finger protein 362 protein-coding 0.046729 0.491841 109(AGGCGGCT,+,0.00) 238(GCCGGGCG,+,0.00) -118(CCGGTAAA,+,0.00) 129(GGCACCCGAAGG,+,0.00) -68(GGCGCGGT,-,0.00) -48(CAGCCGGCCCGG,-,0.00),40(AAGCCAGGCTGC,-,0.00) 561_WT_peak_4495 chr2 232571468 232573258 + 232 NA promoter-TSS (NM_001099285) promoter-TSS (NM_001099285) -872 NM_002823 5757 Hs.459927 NM_002823 HPRD:01778 PTMA TMSA prothymosin, alpha protein-coding 0.093855 0.649358 1216(TCCCCCTCCTTC,+,0.00) 810(GGAGCCGGCATC,+,0.00) 993(GGCGGCCCAG,+,0.00) -129(CTGGGAACGCGG,-,0.00),-74(CCTCCTCCCCGC,+,0.00),230(CCGCCTTCCGTG,+,0.00),1238(CGGGGAGGGCGG,-,0.00) 805(GGGCTGGAGCCG,-,0.00),1507(GAGCGCCCGCTC,+,0.00) -111(CGCGTACT,+,0.00),1337(CGCGTCCG,+,0.00) 892(CCGACGGA,+,0.00) 952(GCCCTGCCCT,+,0.00) -90(CGCCCGGC,-,0.00),1234(GCCGCGGG,+,0.00) 141(CGGAAGAAACTG,+,0.00),1204(CCCCCTCTTCCC,-,0.00),1218(CCCCTCCTTCCG,-,0.00) 709(TCGCGACG,-,0.00) 890(GGCCGACG,-,0.00),893(CGACGGAC,+,0.00),900(CGCCGGAC,+,0.00) 353(CACAACCG,+,0.00),1318(CAAAACAG,+,0.00) 304(CAGGTAAA,+,0.00),596(TTTTCCCG,-,0.00) 1163(CCTTCCCCTCCC,-,0.00) 1430(ACTGCGCA,+,0.00),1432(TGCGCAGC,-,0.00),1560(GCCGCCCA,+,0.00) 778(GCGGGGCCCGCG,+,0.00),1136(CCGGGGCGAGCG,+,0.00),1237(GCGGGGAGGGCG,+,0.00) 511(CGGGGCTCCGCA,-,0.00),1228(CGAGCAGCCGCG,+,0.00) -124(AACGCGGGCC,-,0.00),1144(AGCGCGGCCC,-,0.00),1274(GGGCAGCTTT,+,0.00),1557(AGCGCCGCCC,-,0.00) 238(CGTGTCGG,+,0.00) 1077(GTCCAAGGCGCC,-,0.00) 1279(GCTTTGCCGC,-,0.00) 674(CCGGCAGGCCCC,-,0.00) 561_WT_peak_1184 chr11 1331034 1331542 + 232 NA promoter-TSS (NM_019009) promoter-TSS (NM_019009) 350 NR_029409 255512 Hs.588291 NR_029409 ENSG00000255153 TOLLIP-AS1 - TOLLIP antisense RNA 1 (head to head) ncRNA 0.098425 0.697446 36(AGGCCCGACATC,+,0.00) 209(CTCGGCCTCC,-,0.00) -45(AGCCACCT,-,0.00) 160(CGGGGATGGAGG,-,0.00),211(CGGCCTCCCCGC,+,0.00) 300(GGTCAGGCGCTC,-,0.00) 201(GCCCTGCCCT,+,0.00) -37(GGCGGGGG,+,0.00) -25(CTTCGGAC,+,0.00) 147(CGGGTGAA,+,0.00) 92(CCTTTCTGTTTC,-,0.00) 120(GGCGCGGT,-,0.00),221(GCCGCGCC,+,0.00) 225(CGCCGCTCCGCA,-,0.00) 286(ACCTCGGCCC,-,0.00) -115(CGTGGCGG,+,0.00) 198(CCCGCCCTGCCC,+,0.00) 229(GCTCCGCAGG,-,0.00) 561_WT_peak_540 chr1 154193441 154193953 + 231 NA promoter-TSS (NM_001297720) promoter-TSS (NM_001297720) 372 NM_001287816 9898 Hs.490551 NM_014847 HPRD:06665 UBAP2L NICE-4 ubiquitin associated protein 2-like protein-coding 0.091797 0.699805 199(ATGCGGCT,+,0.00) 139(GGCCTCGA,-,0.00) -6(TCGGTAGG,-,0.00) -26(CCCCCGCC,-,0.00) 209(AGCCTGAGAGGG,-,0.00) 88(AGGTTTTG,-,0.00) -51(TTTACCCT,-,0.00) 123(GCCGCGCC,+,0.00) -127(GCGGCGGCGGCG,+,0.00),-124(GCGGCGGCGGCG,+,0.00),-118(GCGGCGGCAGCG,+,0.00),-98(GCGGGGCCGGGT,+,0.00),-31(CCCTGCCCCCGC,-,0.00) 121(GGGCCGCGCC,+,0.00),163(GGGCGGGGCT,+,0.00) 73(CGAGTCGG,+,0.00) 53(AGCCCTGGCGCC,-,0.00) -101(GCGGCGGGGC,+,0.00) 561_WT_peak_6205 chr6 27447016 27447631 + 231 NA Intergenic Intergenic -6426 NM_007149 7738 Hs.158174 NM_007149 HPRD:03785 ZNF184 - zinc finger protein 184 protein-coding 0.048780 0.469156 -32(CCAACCGA,+,0.00) 101(GTCCGAGG,-,0.00) 378(CCGGTAAA,+,0.00) 561_WT_peak_3836 chr19 49122647 49123052 + 231 NA promoter-TSS (NM_001204159) promoter-TSS (NM_001204159) 59 NM_001204159 56848 Hs.528006 NM_020126 HPRD:06157 SPHK2 SK 2|SK-2|SPK 2|SPK-2 sphingosine kinase 2 protein-coding 0.081481 0.613300 -67(CCGACGCC,+,0.00) 99(CGTAGGCG,-,0.00) 215(CCCCCGGC,-,0.00) -135(CGGAAGAAAGGG,+,0.00) 1(GGGCTGGCAGGG,-,0.00) -69(GCCCGACG,-,0.00) -28(GCGGGCCCAGTG,+,0.00) 13(CTAGTCGG,+,0.00) 561_WT_peak_7318 chr9 86237750 86238709 + 230 NA intron (NR_046421, intron 1 of 3) CpG 265 NR_046421 414328 Hs.530261 NM_001001551 IDNK C9orf103|bA522I20.2 idnK, gluconokinase homolog (E. coli) protein-coding 0.096976 0.695833 272(GGCGGAGGCCGG,-,0.00),662(GCGGCCTCCTCC,+,0.00) 135(GGGCCCGGAAGG,+,0.00) 488(AAGCCGCT,+,0.00),503(AGGCGGCT,+,0.00),661(AGCGGCCT,-,0.00) 44(CGGGGAGGGCGC,-,0.00),138(CCCGGAAGGCGA,-,0.00),435(CCGGGTTCCCGC,+,0.00),581(GCGGGAGGGCGC,-,0.00) -95(GAGTGCCAGGCC,+,0.00) 281(CGGACGCG,-,0.00) 381(TCCCCGCCCT,+,0.00) -86(GCCGGGCG,+,0.00),181(GCCGGGCG,+,0.00),238(GGCGGGGG,+,0.00),361(CCCGCGGC,-,0.00) 151(GGGAAGGAGCCG,+,0.00) 50(GGGCGCAGAGGG,-,0.00),68(CCCTCACTGCCC,+,0.00) 36(CGGGAAAA,+,0.00) -125(TGGGCGGC,-,0.00),267(GGCGCGGC,-,0.00),370(GCCGCGCC,+,0.00),516(GCCGCGCA,+,0.00) 83(CCGGGGCGAGAG,+,0.00),123(CCGGGGCCGGCG,+,0.00),132(GCGGGGCCCGGA,+,0.00),180(CGCCGGGCGCGC,-,0.00),376(CCCTCTCCCCGC,-,0.00) 93(AGCGGCTCCGCC,-,0.00),510(TGCGGGGCCGCG,+,0.00) 96(GGCTCCGCCC,-,0.00) 567(CTTGTCGG,+,0.00) 508(GCTGCGGGGC,+,0.00) -93(GTGCCAGGCCGG,-,0.00),573(GGGGCCAGGCGG,+,0.00) 561_WT_peak_143 chr1 28655223 28655952 + 230 NA promoter-TSS (NM_017638) promoter-TSS (NM_017638) 74 NM_017638 54797 Hs.479911 NM_017638 HPRD:17476 MED18 p28b mediator complex subunit 18 protein-coding 0.056241 0.508219 -110(AGAGACTT,-,0.00) 77(CGGCCTTCTCGG,+,0.00),494(TCGCCTTCCGGG,+,0.00) 139(CCGACCGG,+,0.00) 229(CGTCGCTC,+,0.00) 202(CGGGTAAC,+,0.00) 250(TGCGCGGG,-,0.00) 81(CTTCTCGG,+,0.00) 561_WT_peak_1906 chr12 123237159 123237570 + 230 NA promoter-TSS (NM_003677) promoter-TSS (NM_003677) -7 NM_003677 8562 Hs.22393 NM_003677 HPRD:05182 DENR DRP|DRP1|SMAP-3 density-regulated protein protein-coding 0.119221 0.684466 94(CCGGGGAGACGA,-,0.00) 68(GCGGTCGG,-,0.00),80(TCGGGCGG,-,0.00) -149(CGGCACGC,-,0.00) -18(CCCCGTCTTCCG,-,0.00) 132(TAGCGGCG,-,0.00) -153(CCTTCGGCACGC,-,0.00) -43(CGCACGCTCCGC,-,0.00),143(GCGGAGCCGGCG,+,0.00),152(GCGGGGCCTGTG,+,0.00) 203(CCGAGAAG,-,0.00) 84(GCGGCCCTGGCC,+,0.00),86(GGCCCTGGCCGG,-,0.00) -92(GCGGCCCGCCTC,+,0.00) 561_WT_peak_2601 chr15 90808770 90809264 + 230 NA promoter-TSS (NR_102428) promoter-TSS (NR_102428) -26 NR_102428 10519 Hs.715556 NM_006384 CIB1 CIB|CIBP|KIP1|PRKDCIP|SIP2-28 calcium and integrin binding 1 (calmyrin) protein-coding 0.089069 0.670707 -79(GCCTCCGGCCCG,-,0.00) 2(TGCGTCGA,-,0.00) -72(GCCCGCCCCT,+,0.00) 215(TCGTGCCC,+,0.00),258(TCCTGCCG,+,0.00) -44(CGGCTACTTCCG,-,0.00),179(CGGCTTCTCCCC,-,0.00),263(CCGCTGCTTGCG,-,0.00) -50(CTTACCCG,-,0.00),293(CTTACCCG,-,0.00) 138(GGGAGCCGGAGG,+,0.00),153(GGGAGCTGCAGG,+,0.00) 234(GCCGCGCC,+,0.00),271(TGCGCAGC,-,0.00) 92(GCGGGCCCAGGC,+,0.00) 7(CGACATGGCGGT,-,0.00) 561_WT_peak_1324 chr11 62622846 62623393 + 230 NA promoter-TSS (NR_002563) promoter-TSS (NR_002563) -16 NR_002565 9303 NR_002565 ENSG00000255717 SNORD25 RNU25|U25 small nucleolar RNA, C/D box 25 snoRNA 0.045704 0.483577 9(AGAGGCTT,-,0.00),317(AGCCACTT,-,0.00) 359(CCGGGGAGACGA,-,0.00) 160(TCGAGGCC,+,0.00) -85(CGTGCGCG,-,0.00) -81(CGCGTAAA,+,0.00) 109(CCCGCCATCGCC,+,0.00),190(GTCGCCCTGGCC,+,0.00) 561_WT_peak_5716 chr5 42992426 42992802 + 229 NA non-coding (NR_104643, exon 1 of 2) non-coding (NR_104643, exon 1 of 2) 821 NR_104643 643977 Hs.535791 NR_104643 FLJ32255 - uncharacterized LOC643977 ncRNA 0.093085 0.620690 168(TGGCGTTCCCGG,+,0.00) 87(TCGATGCC,+,0.00) -122(CGGTTTTG,-,0.00) -132(GCGGAGCGGGCG,+,0.00),180(GCGGCGGCGGCG,+,0.00),183(GCGGCGGCGGCG,+,0.00) -125(GGGCGGTTTT,+,0.00) 186(GCGGCGGCGC,+,0.00) 561_WT_peak_1123 chr10 103113490 103113956 + 229 NA promoter-TSS (NM_001256856) promoter-TSS (NM_001256856) -67 NM_001256856 8945 Hs.643802 NM_003939 HPRD:04596 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding 0.079399 0.614561 152(TCAGCCTGCGCC,+,0.00) -134(AAGCCGCT,+,0.00),-133(AGCCGCTA,-,0.00),-44(AGCCGATT,-,0.00),132(AGCCGATT,-,0.00) -123(GGCGTCGC,-,0.00) -119(TCGCTCGG,-,0.00),290(CCGGCCGA,+,0.00) 179(GGCGGGGG,+,0.00) -121(CGTCGCTC,+,0.00) 244(GCGGCCCCGGCG,+,0.00) 295(CGAGGCGG,+,0.00) -139(CAGGCAAGCCGC,-,0.00),225(GCGGCCTGGCAC,+,0.00) 561_WT_peak_1886 chr12 120966700 120967058 + 229 NA promoter-TSS (NM_032314) promoter-TSS (NM_032314) 85 NM_032314 84274 Hs.17250 NM_032314 HPRD:17560 COQ5 - coenzyme Q5 homolog, methyltransferase (S. cerevisiae) protein-coding 0.086592 0.621170 -116(CCCCCCTTCTCC,+,0.00) 167(CGAACGCG,-,0.00) -139(CCCTCTCGCCCC,+,0.00) 561_WT_peak_1802 chr12 93861278 93861652 + 229 NA intron (NM_014050, intron 1 of 5) CpG 199 NM_014050 28977 Hs.199579 NM_014050 HPRD:14761 MRPL42 L31MT|L42MT|MRP-L31|MRP-L42|MRP-S32|MRPL31|MRPS32|PTD007|RPML31|S32MT mitochondrial ribosomal protein L42 protein-coding 0.053476 0.586667 -109(AACCGCTT,-,0.00),46(ATGTGGCT,+,0.00) -49(TTGGTCGG,-,0.00) -164(CGTGGGAC,+,0.00) 561_WT_peak_290 chr1 75198687 75199210 + 229 NA promoter-TSS (NR_027962) promoter-TSS (NR_027962) 86 NR_027962 127253 Hs.348411 NM_138467 HPRD:14036 TYW3 C1orf171 tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) protein-coding 0.053537 0.572519 126(AAAGCGGACC,-,0.00) 561_WT_peak_2018 chr13 43151658 43151894 + 229 NA intron (NM_003701, intron 1 of 4) intron (NM_003701, intron 1 of 4) 3485 NM_003701 8600 Hs.333791 NM_003701 HPRD:04031 TNFSF11 CD254|ODF|OPGL|OPTB2|RANKL|TRANCE|hRANKL2|sOdf tumor necrosis factor (ligand) superfamily, member 11 protein-coding 0.004237 0.400844 561_WT_peak_355 chr1 109289107 109289766 + 228 NA intron (NM_007269, intron 1 of 18) CpG 151 NM_007269 6814 Hs.530436 NM_007269 HPRD:10517 STXBP3 MUNC18-3|MUNC18C|PSP|UNC-18C syntaxin binding protein 3 protein-coding 0.100152 0.700000 375(CTCGGCCGCG,-,0.00),457(CTCGGCCGCG,-,0.00) 355(GGCGTCGG,-,0.00) 488(CGTCCGCG,-,0.00) 285(TTCCTGCCCT,+,0.00),417(GCCCGGCCCG,+,0.00) 416(CGCCCGGC,-,0.00) 185(CCGTGCCG,+,0.00) 102(TGGCAGAGAGGG,-,0.00),156(GGGTTGAGAGAG,-,0.00) 329(GTGCGACG,-,0.00),357(CGTCGGGC,+,0.00) 47(GGGAGTGGAAGG,+,0.00) -104(ACTGCGCA,+,0.00),-102(TGCGCAGC,-,0.00),-39(GGCGCGGT,-,0.00) 6(GCGGGGCCACCC,+,0.00) 192(GGGCCTCGTT,+,0.00),397(AGCTCCGCCC,-,0.00) 391(CCGCGAAG,-,0.00) 70(GCTCCGCAGT,-,0.00),390(GCCGCGAAGC,+,0.00) 419(CCGGCCCGGCTT,+,0.00) 561_WT_peak_562 chr1 156470772 156471204 + 228 NA promoter-TSS (NM_005920) promoter-TSS (NM_005920) -354 NM_005920 4209 Hs.314327 NM_005920 HPRD:02810 MEF2D - myocyte enhancer factor 2D protein-coding 0.081019 0.674365 -52(AGAGGCCT,-,0.00) -112(CCGCCTGCCGGG,+,0.00),-105(CCGGGAGGGAGG,-,0.00),2(CCGCCCGCCCGC,+,0.00),6(CCGCCCGCCCGC,+,0.00),56(CCGGGGAGGCCG,-,0.00) 15(CGCCTGGCGCTG,-,0.00) -35(TCGGTCCG,-,0.00) 115(CGCGGCCCCGGG,-,0.00) -140(GCTGCGGCGC,+,0.00) 561_WT_peak_467 chr1 147874641 147875193 + 228 NA intron (NR_111930, intron 1 of 8) U1|snRNA|snRNA 281 NR_111930 100132057 Hs.585189 NR_033189 LOC100132057 - phosphodiesterase 4D interacting protein pseudogene pseudo 0.041667 0.490054 -67(CGGACCGGAGAG,+,0.00) -100(CCGTGCCG,+,0.00) -70(GGTCGGAC,+,0.00) 4(CGTGTAAA,+,0.00) 31(GCGGCGGGGC,+,0.00) 561_WT_peak_2265 chr14 69259965 69260833 + 228 NA 5' UTR (NM_004926, exon 1 of 2) 5' UTR (NM_004926, exon 1 of 2) 232 NM_004926 677 Hs.85155 NM_004926 HPRD:03041 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein-like 1 protein-coding 0.078341 0.573072 219(AAGTGTCT,+,0.00) 280(CCGGGCAGGCCG,-,0.00) 464(CGCGTCGA,-,0.00) 191(GAGCTGGCGGTC,-,0.00) 460(CGCACGCG,-,0.00) 668(CCCACCGA,+,0.00) 428(GGCGGGGG,+,0.00) 442(CGGCACAA,-,0.00),547(CGGGACGA,-,0.00),577(GCGTGCCG,+,0.00) -164(AGGAAGAAGGGG,+,0.00),648(CCCCTTCCTCCC,-,0.00) 239(TTTTCCCG,-,0.00),563(TTTACCAG,-,0.00) 145(GGGAGCTGAAGC,+,0.00),259(CACTCGGCTCCC,-,0.00) -106(GCCGCGCA,+,0.00) 172(GGGCCGCGGT,+,0.00) 483(GCTTTGCAGC,-,0.00) 167(CGCCCGGGCCGC,-,0.00) 561_WT_peak_4722 chr20 62199228 62199784 + 228 NA promoter-TSS (NM_033405) promoter-TSS (NM_033405) -399 NM_033405 85441 Hs.517180 NM_033405 HPRD:11459 HELZ2 PDIP-1|PRIC285 helicase with zinc finger 2, transcriptional coactivator protein-coding 0.028777 0.617594 73(CAGCCTTCCCCG,+,0.00),252(CCGCCTGCCCGG,+,0.00) 250(GACCGCCTGCCC,+,0.00) 275(GCCGGGCG,+,0.00) -143(AAATCAGCCC,-,0.00) 99(GGCCAGGGCCCC,-,0.00),376(GAGGCCATGGCC,+,0.00),378(GGCCATGGCCAG,-,0.00) 561_WT_peak_6566 chr7 643953 644428 + 228 NA intron (NR_110055, intron 1 of 1) CpG 1155 NR_110055 101926963 Hs.521338 NR_110054 LOC101926963 - uncharacterized LOC101926963 ncRNA 0.050526 0.649160 12(GGTTCCGGCTCA,-,0.00) 64(CCGCCTGCGCGG,+,0.00) 299(TCGTGCTG,+,0.00) -162(TTGACCCG,-,0.00) 69(TGCGCGGG,-,0.00) 561_WT_peak_5914 chr5 132361833 132362260 + 228 NA intron (NM_001300818, intron 1 of 3) CpG 229 NM_001300818 54819 Hs.29700 NM_017665 HPRD:15699 ZCCHC10 - zinc finger, CCHC domain containing 10 protein-coding 0.096019 0.619159 172(CGAACCGGATCC,+,0.00) 152(TCCCAGCCCT,+,0.00) -20(CCGTGCCG,+,0.00) 149(CGCTCCCAGCCC,+,0.00) -155(TGTCGGAC,+,0.00),117(GTCCGACA,-,0.00) 244(CAAAGCCG,+,0.00) -7(TTTACGCG,-,0.00),143(TTTCCCCG,-,0.00) 252(GCCGCGCA,+,0.00) 247(AGCCGGCCGCGC,-,0.00) 561_WT_peak_7136 chr8 125384535 125385172 + 228 NA promoter-TSS (NM_194291) promoter-TSS (NM_194291) 87 NM_194291 157378 Hs.187646 NM_194291 TMEM65 - transmembrane protein 65 protein-coding 0.105181 0.705329 89(CCGCCCTCCTCC,+,0.00) 19(GCGGGCGGGCGG,-,0.00),276(GCGGGGGGGCGG,-,0.00) -30(GGGCGGGCGGTC,-,0.00) -24(GCGGTCGG,-,0.00) -92(TCCCGCCCCT,+,0.00) -103(CCCGCGGC,-,0.00) 331(TCGGGCCG,+,0.00) 216(CGCCGCTA,+,0.00) -138(GCCTCCTGTTCC,-,0.00) 305(GCTGCGCA,+,0.00) 14(GCGGCGCGGGCG,+,0.00),27(GCGGGGCGGGCT,+,0.00),207(CGCCGCCGCCGC,-,0.00),210(CGCCGCCGCCGC,-,0.00) -158(CGCGGGCCCGCG,+,0.00),-158(CGCGGGCCCGCG,-,0.00) 101(AGCGCCGCCC,-,0.00) 561_WT_peak_1144 chr10 112174340 112174692 + 228 NA Intergenic Intergenic -83109 NM_004419 1847 Hs.2128 NM_004419 HPRD:04349 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding 0.017045 0.555241 561_WT_peak_2136 chr14 23476387 23476779 + 228 NA intron (NM_001130706, intron 1 of 7) intron (NM_001130706, intron 1 of 7) 2827 NM_021944 60686 Hs.255874 NM_021944 HPRD:12662 C14orf93 - chromosome 14 open reading frame 93 protein-coding 0.035714 0.516539 -8(CGTCAGAC,+,0.00),-7(GTCAGACG,-,0.00) -120(GCTGGGGAGC,+,0.00) 561_WT_peak_5489 chr4 54930249 54930813 + 228 NA 5' UTR (NM_012110, exon 1 of 6) 5' UTR (NM_012110, exon 1 of 6) 284 NM_012110 26511 Hs.335393 NM_012110 HPRD:10373 CHIC2 BTL cysteine-rich hydrophobic domain 2 protein-coding 0.106383 0.695575 -85(TCGCCCTCCTCC,+,0.00),128(GGCGGAGGCTGA,-,0.00) -79(TCCTCCGGGCCT,-,0.00) 116(GGCGGGCGAG,+,0.00),125(GGCGGCGGAG,+,0.00) 230(TCGCCGCC,+,0.00) -45(CGCGGACG,+,0.00) -100(CCGCACCTCCCG,-,0.00) -29(GTCCGGCG,-,0.00) 323(CGCTGCCGCCGC,-,0.00) -53(ACCGGAGCCGCG,+,0.00) -118(AACGGGGCCC,-,0.00) 122(CGAGGCGG,+,0.00) 561_WT_peak_1862 chr12 112450602 112450898 + 227 NA promoter-TSS (NM_006817) promoter-TSS (NM_006817) 273 NM_001294314 89894 Hs.506815 NM_138341 HPRD:11275 TMEM116 - transmembrane protein 116 protein-coding 0.050676 0.619529 -126(GGGGAGGCGCTC,-,0.00) 35(CTGACCGA,+,0.00) -103(GGCCTAAGAGGG,-,0.00) -41(CGCGGAGCCACT,+,0.00) -156(GGGCGGATCC,+,0.00) -73(CCGCCAAG,-,0.00) -43(GCCGCGGAGC,+,0.00) 561_WT_peak_3257 chr17 55362318 55362830 + 227 NA intron (NM_138962, intron 5 of 13) intron (NM_138962, intron 5 of 13) 28200 NM_170721 124540 Hs.658922 NM_138962 HPRD:07438 MSI2 MSI2H musashi RNA-binding protein 2 protein-coding 0.017578 0.461988 -64(GGCGTCGG,-,0.00) 110(AGGGGAGGGA,-,0.00) 317(CGGTTTTC,-,0.00) 285(GGGGGCTGGCTG,+,0.00) 561_WT_peak_6585 chr7 6769022 6769641 + 227 NA Intergenic CpG -5605 NR_002217 441194 Hs.715590 NR_002217 ENSG00000187953 PMS2CL PMS2P13 PMS2 C-terminal like pseudogene pseudo 0.066236 0.624194 110(GAGTCCGGCCCT,-,0.00) -84(CCTTGGGCTCCA,-,0.00) 235(GCTTCCTGTGTG,-,0.00) 210(TGCGCGCT,-,0.00) 214(CGCTGCCGCCGC,-,0.00) 346(CTAGGCGG,+,0.00) 561_WT_peak_3953 chr2 8685431 8685706 + 227 NA Intergenic Intergenic 38354 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LOC101929567 - uncharacterized LOC101929567 ncRNA 0.043636 0.626812 -49(AGACGCCT,-,0.00) -30(TCGTGCCT,+,0.00) -75(GCGGCCAAGC,+,0.00) 561_WT_peak_5724 chr5 43042107 43043269 + 227 NA non-coding (NR_015447, exon 1 of 2) non-coding (NR_015447, exon 1 of 2) 452 NR_015447 153684 Hs.259625 NR_015447 HPRD:14101 LOC153684 - uncharacterized LOC153684 ncRNA 0.088640 0.610490 -57(CGAGCCGGAACC,+,0.00) -63(GGAGGCCGAG,+,0.00) 500(AAGTGTCT,+,0.00) 404(CCGCGAAGCCGG,-,0.00) 621(TCGACGAC,+,0.00) 32(GCCCAGCCCT,+,0.00) 27(CCCCCGCC,-,0.00) 359(TCGCGCCG,+,0.00),413(CGGCACTA,-,0.00),470(CAGCACGA,-,0.00) 29(CCCGCCCAGCCC,+,0.00) 17(CGTCGGGC,+,0.00) -121(CGAAACCG,+,0.00),345(CAAAACCG,+,0.00),536(CAAAACCA,+,0.00),833(CAAAAGCG,+,0.00) -15(CCTGCAGCTCCC,-,0.00) 655(TGCGCGGC,-,0.00),681(TCCGCGCA,+,0.00),933(GGCGCGGC,-,0.00) -94(CGCCGGCGGCGC,-,0.00),-91(CGGCGGCGCCGC,-,0.00),596(GTGGGGCCAGAG,+,0.00),845(GCGGTGCCAGTG,+,0.00) 404(CCGCGAAG,-,0.00),449(CCGAGACG,-,0.00),589(CGTGGCGG,+,0.00) -42(GCGGCGGCGC,+,0.00),909(GCTTCGCAGG,-,0.00) 561_WT_peak_215 chr1 45275032 45275455 + 227 NA intron (NM_001136537, intron 1 of 7) intron (NM_001136537, intron 1 of 7) 1089 NM_001136537 149478 Hs.632400 NM_001136537 ENSG00000222009 BTBD19 - BTB (POZ) domain containing 19 protein-coding 0.011820 0.582547 -87(GAGGCCGGGCTG,+,0.00) 561_WT_peak_6888 chr7 148788413 148788768 + 227 NA promoter-TSS (NM_152411) promoter-TSS (NM_152411) -721 NM_152411 136051 Hs.729572 NM_152411 HPRD:13232 ZNF786 - zinc finger protein 786 protein-coding 0.067606 0.665730 -116(CGGGCTCCCCGG,+,0.00) 2(GCGGTCGG,-,0.00) 23(CGGCAGGA,-,0.00) 14(CCCGGGCCCCGG,-,0.00) 561_WT_peak_6423 chr6 107077183 107077711 + 227 NA promoter-TSS (NM_032730) promoter-TSS (NM_032730) 6 NM_018292 55278 Hs.406917 NM_018292 HPRD:15199 QRSL1 GatA glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 protein-coding 0.068182 0.608696 -27(TGGCCCGGAATC,+,0.00) 261(CCGGGAGGGCGG,-,0.00) -124(TCCCTGCCCT,+,0.00) 197(GGGCACGA,-,0.00) 144(TAGCGACC,-,0.00) 90(CGGTGTTG,-,0.00) 227(CCGAGAAG,-,0.00) 561_WT_peak_5224 chr3 119813958 119814612 + 226 NA Intergenic CpG -1021 NM_002093 2932 Hs.445733 NM_002093 HPRD:05418 GSK3B - glycogen synthase kinase 3 beta protein-coding 0.094801 0.676336 336(GGCGGCCGCG,+,0.00) -112(AATCGGCT,+,0.00),291(AGACGCTA,-,0.00),375(AGAGGCTT,-,0.00) 84(GCGGTCGG,-,0.00) 355(GCCGCGGG,+,0.00) 483(CAAAACGG,+,0.00) -61(CCTTCGGCCCCG,-,0.00) 334(TGGGCGGC,-,0.00),340(GCCGCGCC,+,0.00),396(TGCGCGGC,-,0.00) 349(CGCCCAGCCGCG,+,0.00) 91(GCGGCCCTGGGC,+,0.00) 266(CCTTCCCAGC,-,0.00) 399(GCGGCCCGGCCG,+,0.00) 561_WT_peak_2628 chr15 98703575 98703952 + 226 NA Intergenic Intergenic -71781 NR_120325 101927332 NR_120325 LOC101927332 - uncharacterized LOC101927332 ncRNA 0.021220 0.433862 -44(CAAAACCG,+,0.00) 561_WT_peak_6143 chr6 26054996 26055391 + 226 NA TTS (NM_005319) TTS (NM_005319) 1506 NM_005319 3006 Hs.7644 NM_005319 HPRD:07514 HIST1H1C H1.2|H1C|H1F2|H1s-1 histone cluster 1, H1c protein-coding 0.032911 0.409091 53(CAAAATCG,+,0.00) 561_WT_peak_5009 chr3 12882666 12883049 + 226 NA promoter-TSS (NM_001007074) promoter-TSS (NM_001007074) 224 NM_000994 6161 Hs.265174 NM_000994 HPRD:17995 RPL32 L32 ribosomal protein L32 protein-coding 0.062663 0.609375 -125(GTCCCACG,-,0.00) -73(CCGCCAAG,-,0.00),162(CCGAGAAG,-,0.00) 561_WT_peak_6143-2 chr6 26055557 26056745 + 226 NA exon (NM_005319, exon 1 of 1) exon (NM_005319, exon 1 of 1) 548 NM_005319 3006 Hs.7644 NM_005319 HPRD:07514 HIST1H1C H1.2|H1C|H1F2|H1s-1 histone cluster 1, H1c protein-coding 0.053030 0.535744 -89(GGAGCAGGGCGG,-,0.00) 57(GCCTCCGGTCAG,-,0.00) 342(AGCGGCCT,-,0.00),423(AGCCACTT,-,0.00),510(AGCCGCCT,-,0.00),828(AGACGCCT,-,0.00) 914(CGGCAGGA,-,0.00) 33(CAAAACCA,+,0.00) 953(CGGGTACA,+,0.00) 909(GGGAGCGGCAGG,+,0.00) 898(GGCGCGGC,-,0.00) 502(GCGCCGCCAGCC,+,0.00) 995(GGGCCGCTGT,+,0.00) 343(GCGGCCTTGGGC,+,0.00) 353(GCTTCACAGC,-,0.00),392(GCTTCGCAAC,-,0.00) 561_WT_peak_2131 chr14 23298881 23299457 + 226 NA promoter-TSS (NM_181306) promoter-TSS (NM_181306) 77 NM_181305 122704 Hs.355935 NM_178336 HPRD:14770 MRPL52 - mitochondrial ribosomal protein L52 protein-coding 0.059028 0.603120 -163(AACGGCTT,-,0.00),241(TAGCCGCT,+,0.00),242(AGCCGCTT,-,0.00) 0(CCTGCTTCCCCG,+,0.00) 13(TAGCGTCG,-,0.00) -78(CAGTTTTG,-,0.00) -4(ACTTCCTGCTTC,-,0.00) 176(TGCGCGGC,-,0.00) -42(GGCGGAGCCGTG,+,0.00) 174(GCTGCGCGGC,+,0.00) 561_WT_peak_6964 chr8 29386910 29387321 + 226 NA Intergenic Intergenic -178848 NM_001394 1846 Hs.417962 NM_001394 HPRD:04123 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding 0.043796 0.560680 -7(TCGGCTTCCTCC,+,0.00) -160(AGACGCCT,-,0.00) -76(GGGTTTTG,-,0.00) -72(TTTGCCCG,-,0.00) 561_WT_peak_4235 chr2 101618437 101619027 + 226 NA promoter-TSS (NM_001099693) promoter-TSS (NM_001099693) 41 NM_001098577 6160 Hs.469473 NM_000993 HPRD:17994 RPL31 L31 ribosomal protein L31 protein-coding 0.067797 0.614213 -140(TGGCCCTGCTCC,+,0.00) 93(CGACCCGGAAGT,+,0.00),376(ATTTCCGGGTCG,-,0.00) -155(AAGTCTCT,+,0.00) 4(ACGACGCC,+,0.00) 263(CCGAGCCAGCCC,+,0.00) 0(CGCCACGA,-,0.00) -14(CAAAAGCG,+,0.00),282(CGGTTGTG,-,0.00) -101(TTTATCCG,-,0.00) 357(GGGAGCCGGAGC,+,0.00) -143(CCCTGGCCCTGC,-,0.00),16(AGCTGGCCCCAC,-,0.00) -8(CGCGGCCCCGCC,-,0.00) -10(AGCGCGGCCC,-,0.00) -67(CTTCGCGG,+,0.00),-1(CCGCCACG,-,0.00) 265(GAGCCAGCCCGG,-,0.00) 561_WT_peak_7398 chr9 116172579 116173308 + 226 NA promoter-TSS (NM_001278629) promoter-TSS (NM_001278629) 12 NR_027261 54107 Hs.108112 NM_017443 HPRD:06274 POLE3 CHARAC17|CHRAC17|YBL1|p17 polymerase (DNA directed), epsilon 3, accessory subunit protein-coding 0.080933 0.593151 -21(CCTCCCTCCTCC,+,0.00),0(CCCGCCTCCGCC,+,0.00) 373(AAGCGGTT,+,0.00) 226(GCCGGGCG,+,0.00) -102(CGTCGCTA,+,0.00) -10(CCCCCACAGCCC,+,0.00) 47(TGGTTTTG,-,0.00),376(CGGTTTGG,-,0.00),523(CGCTTTTG,-,0.00) -145(CCTTCGCCTCCG,-,0.00),242(GGGAGACGAAGG,+,0.00) 220(GGCGCGGC,-,0.00),327(ACCGCGCC,+,0.00) 299(CTCTGGGCCCGC,-,0.00) 270(GGGCGGATCC,+,0.00),340(GGGCCACGTT,+,0.00) -105(CCGCGTCG,-,0.00),57(CCGCCAAG,-,0.00),133(CCGCGTCG,-,0.00) 56(CCCGCCAAGGCT,+,0.00) 561_WT_peak_369 chr1 110882010 110882387 + 226 NA promoter-TSS (NR_036595) promoter-TSS (NR_036595) 253 NM_022768 64783 Hs.435947 NM_022768 HPRD:05832 RBM15 OTT|OTT1|SPEN RNA binding motif protein 15 protein-coding 0.103448 0.653439 120(TAGCGGCG,-,0.00) -32(CTCCGACG,-,0.00) -69(CGCGGGGCGGCG,+,0.00),-52(CTCAGCTCCGCG,-,0.00) 561_WT_peak_6081 chr6 2990054 2990793 + 226 NA non-coding (NR_026855, exon 2 of 2) non-coding (NR_026855, exon 2 of 2) 2222 NR_026856 401232 Hs.720158 NM_207495 HPRD:16819 LINC01011 DKFZP686I15217 long intergenic non-protein coding RNA 1011 ncRNA 0.025710 0.436486 224(CAAAACTG,+,0.00) 561_WT_peak_6201 chr6 27144905 27145198 + 226 NA Intergenic tRNA-Ile-ATT|tRNA|tRNA 29646 NR_036096 100422934 NR_036096 miRBase:MI0014167 MIR3143 - microRNA 3143 ncRNA 0.051195 0.380952 -72(CCCGTACG,+,0.00),-70(CGTACGGG,-,0.00) -160(TAAAACCG,+,0.00) 561_WT_peak_779 chr1 228768326 228768561 + 226 NA Intergenic CpG -11951 NR_037962 58480 Hs.647774 NM_021205 HPRD:06965 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding 0.076596 0.610169 41(GCCCGGCCCG,+,0.00) 40(AGCCCGGCCC,-,0.00) 16(GGCGCCTGGCTG,+,0.00),43(CCGGCCCGGCCG,+,0.00) 561_WT_peak_694 chr1 205091290 205091622 + 226 NA promoter-TSS (NM_001193273) promoter-TSS (NM_001193273) -306 NM_001193272 5929 Hs.519230 NM_005057 HPRD:02826 RBBP5 RBQ3|SWD1 retinoblastoma binding protein 5 protein-coding 0.054217 0.492492 71(CGCGTACT,+,0.00) 48(TAGCGCCG,-,0.00) 561_WT_peak_7018 chr8 49838123 49838386 + 226 NA Intergenic Intergenic -4255 NM_003068 6591 Hs.360174 NM_003068 HPRD:03689 SNAI2 SLUG|SLUGH1|SNAIL2|WS2D snail family zinc finger 2 protein-coding 0.007605 0.367424 561_WT_peak_243 chr1 53168850 53169242 + 225 NA Intergenic Intergenic -5008 NM_023077 65260 Hs.349905 NM_023077 COA7 C1orf163|RESA1|SELRC1 cytochrome c oxidase assembly factor 7 (putative) protein-coding 0.045918 0.590331 -96(GCCCTGCCCT,+,0.00) 561_WT_peak_2148 chr14 24684958 24685426 + 225 NA promoter-TSS (NM_138476) promoter-TSS (NM_138476) 84 NM_001199821 145553 Hs.220963 NM_138476 HPRD:14695 MDP1 FN6PASE|MDP-1 magnesium-dependent phosphatase 1 protein-coding 0.059829 0.605544 -10(TCCCGTCCCT,+,0.00) -82(CGGGAGATGCAG,+,0.00) 159(CGTCGCCA,+,0.00) 77(TTCACCCG,-,0.00) 30(GCCGCGCC,+,0.00) 32(CGCGCCATGACC,+,0.00) 561_WT_peak_4824 chr22 18121220 18121937 + 225 NA exon (NM_001270726, exon 1 of 6) exon (NM_001270726, exon 1 of 6) 228 NM_001270731 23786 Hs.631672 NM_015367 HPRD:09822 BCL2L13 BCL-RAMBO|Bcl2-L-13|MIL1 BCL2-like 13 (apoptosis facilitator) protein-coding 0.090656 0.655989 286(CCGGGAAGGCTG,-,0.00) -76(TCGACTCC,+,0.00),100(CCGACGCC,+,0.00),546(TCCACGCC,+,0.00) 42(TTGGTCGG,-,0.00) 171(GCCGCGGG,+,0.00) -38(CGTCGCAA,+,0.00) -18(GGGCTAGGAGGG,-,0.00) 374(TTCCGACG,-,0.00) 51(CCTTCCGCTCCG,-,0.00),514(GGGTGCCGGAGG,+,0.00) 469(ACCTGGCCGCGC,-,0.00),539(CCCTGGCTCCAC,-,0.00) 478(CGCGGCCCCGCC,-,0.00) 532(AGCTCGGCCC,-,0.00) 145(CAACATGGCGGC,-,0.00),255(GGGGCCAGGGCC,+,0.00) 482(GCCCCGCCGC,-,0.00) 561_WT_peak_1409 chr11 73498773 73499276 + 225 NA exon (NM_016055, exon 1 of 8) exon (NM_016055, exon 1 of 8) 107 NM_016055 51642 Hs.503239 NM_016055 MRPL48 HSPC290|L48MT|MRP-L48 mitochondrial ribosomal protein L48 protein-coding 0.069583 0.601190 249(ATGCGGCT,+,0.00) 15(CTGGGAACGCGG,-,0.00) 261(GGCGTTGA,-,0.00) 116(CGCACGCG,-,0.00) -44(TCGGTGGG,-,0.00) 146(GTGCAGAGAGGG,-,0.00) 221(GGGCGCCCAAGG,+,0.00) 62(GCCGCGCA,+,0.00) 121(GCGGGGCGCGGG,+,0.00) 62(GCCGCGCAGC,-,0.00),234(CCTTCCCAGC,-,0.00) 561_WT_peak_7219 chr9 19127618 19128306 + 225 NA promoter-TSS (NR_038064) promoter-TSS (NR_038064) -358 NM_001122 123 Hs.3416 NM_001122 HPRD:00057 PLIN2 ADFP|ADRP perilipin 2 protein-coding 0.066860 0.608128 510(GGAGGCCGAG,+,0.00) 465(TGGCGGCT,+,0.00) 81(GGGATGGCGCCC,-,0.00) -126(CCGGTCGG,-,0.00) -58(GCCGGGCG,+,0.00),-54(GGCGGGGG,+,0.00) 436(TAGCGAAG,-,0.00) -120(GGGTTGAGAGGG,-,0.00) 97(CGGCTTTG,-,0.00),105(GGGTTTTG,-,0.00) 474(GGCGCGGT,-,0.00) -86(CCGCCACG,-,0.00) 334(CCTGCGAGGC,+,0.00) 37(GGGTCCTGCCTG,+,0.00),88(CGCCCAGGCCGG,-,0.00) 561_WT_peak_4563 chr20 10414670 10415264 + 224 NA promoter-TSS (NR_072977) promoter-TSS (NR_072977) -80 NM_170784 8195 Hs.472119 NM_018848 HPRD:05356 MKKS BBS6|HMCS|KMS|MKS McKusick-Kaufman syndrome protein-coding 0.082492 0.561345 60(GACGCCGGGCCG,-,0.00) 58(TCGACGCC,+,0.00) -128(TCGGCCGG,-,0.00) -64(TCGCGCCG,+,0.00) -10(CCGCTGCTGCCG,-,0.00),80(CCGCTTCTCCGG,-,0.00) 45(CGCAGCTCTGCG,-,0.00) 61(ACGCCGGGCCGC,-,0.00) 561_WT_peak_4484 chr2 227700202 227701144 + 223 NA promoter-TSS (NM_001167608) promoter-TSS (NM_001167608) 2 NM_001167608 84236 Hs.471514 NM_032276 HPRD:13206 RHBDD1 RRP4 rhomboid domain containing 1 protein-coding 0.100849 0.668081 -109(CCACCCTCCGCC,+,0.00) -41(GGGCCCGGAAGG,+,0.00),50(GTCTTCGGGTCC,-,0.00) 17(GGCGGCCGCG,+,0.00),302(CGCGGCCGAG,+,0.00),521(GGCGGCCGGG,+,0.00) 71(AGGTCGCT,+,0.00),483(AGCGGCAT,-,0.00) 554(GCGCCTCCCGGG,+,0.00) 551(TCGGCGCC,+,0.00) 528(GGGCTGGGGCTG,-,0.00),734(GGGTTGGCGCTG,-,0.00) 86(CTTACGCG,-,0.00),250(CGCACGCG,-,0.00),395(CGTGCGCG,-,0.00) 36(CTGCTTCTCCCC,-,0.00),725(CGGAGGAAGGGG,+,0.00) 220(CCCTCGCGGCCC,+,0.00) 692(CGCCGGAC,+,0.00) 500(TTTCCCCG,-,0.00) 51(TCTTCGGGTCCC,-,0.00) 632(GCGGGGAGGGCG,+,0.00) 581(AGGCATGGCGGG,-,0.00) -65(GCTCCCCAGC,-,0.00),-24(GCTTCCCGGC,-,0.00) 522(GCGGCCGGGCTG,+,0.00) 561_WT_peak_6368 chr6 70506358 70506851 + 223 NA intron (NM_018368, intron 1 of 15) CpG 445 NM_018368 55788 Hs.271643 NM_018368 HPRD:12877 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding 0.064909 0.635628 91(GTCTCCGGGGCC,-,0.00),98(GGGCCCGGAGAG,+,0.00),256(GCTTCCGGTCCA,-,0.00) 0(TCGACACC,+,0.00) 14(CCCCCGCC,-,0.00) -73(CGGCAAGA,-,0.00) 80(GGGCGAAGAGGG,-,0.00) 232(GCCGCGCC,+,0.00) 9(CCCTGCCCCCGC,-,0.00) 561_WT_peak_2952 chr16 89307647 89307977 + 223 NA Intergenic LTR55|LTR|ERV 23701 NM_182531 197320 Hs.647385 NM_182531 HPRD:08111 ZNF778 - zinc finger protein 778 protein-coding 0.066667 0.622356 -148(GGAGGAGAGCGA,-,0.00) -36(GCGGTCGG,-,0.00) 21(CGGTTTTT,-,0.00) 561_WT_peak_2691 chr16 9186246 9186806 + 223 NA intron (NM_014117, intron 1 of 3) CpG-8843 989 NM_014117 29035 Hs.221497 NM_014117 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding 0.080357 0.648841 -33(CTCTCCGGGCCC,-,0.00),-2(CGGCCCGGAGAC,+,0.00) -139(CCCCCTCCCCGC,+,0.00),-116(GCGGGAGGGAGG,-,0.00),187(CTGCCCCCCCGG,+,0.00) 365(CAGACCGA,+,0.00) -119(GCCGCGGG,+,0.00) -8(CCCCCTCGGCCC,+,0.00) -48(GTCCGAGG,-,0.00) 168(TTTCCCCG,-,0.00) -161(CGGTGGCTCCGC,-,0.00),89(GCGGGGACTGCC,+,0.00) -160(GGTGGCTCCGCG,-,0.00) -156(GCTCCGCGGC,-,0.00) 561_WT_peak_1091 chr10 91461272 91461627 + 223 NA intron (NM_001284259, intron 1 of 32) CpG 102 NM_016195 9585 Hs.240 NM_016195 HPRD:09268 KIF20B CT90|KRMP1|MPHOSPH1|MPP-1|MPP1 kinesin family member 20B protein-coding 0.073239 0.609551 35(GGAGGTGGGTGA,-,0.00) 75(AAACGGCT,+,0.00),76(AACGGCTT,-,0.00) -116(TGGACGCC,+,0.00) -150(CAGCGCGAGCCG,+,0.00) 78(CGGCTTTG,-,0.00) 46(ACTGCGCA,+,0.00) 561_WT_peak_2898 chr16 71842373 71843016 + 223 NA 5' UTR (NM_001128, exon 1 of 23) 5' UTR (NM_001128, exon 1 of 23) 282 NM_001030007 164 Hs.461253 NM_001128 HPRD:04637 AP1G1 ADTG|CLAPG1 adaptor-related protein complex 1, gamma 1 subunit protein-coding 0.080871 0.619565 129(CGGCCCGAAACC,+,0.00) 205(TGGCGGCT,+,0.00) 69(CCCGCGGC,-,0.00) 129(CGGCCCGA,-,0.00),354(TCGTGCCT,+,0.00) 436(GAGCGACG,-,0.00) -79(GTCCGAGG,-,0.00) -37(CCTGGGGCTCCC,-,0.00) 160(CCGGGGGCGGCG,+,0.00) 382(AACTCGGACC,-,0.00) 78(GCGGCGGGGC,+,0.00) 561_WT_peak_5935 chr5 137090208 137091050 + 223 NA promoter-TSS (NM_006805) promoter-TSS (NM_006805) -590 NM_006805 10949 Hs.96996 NM_006805 HPRD:17112 HNRNPA0 HNRPA0 heterogeneous nuclear ribonucleoprotein A0 protein-coding 0.084323 0.647687 398(AGAGGCCT,-,0.00) 152(CGGCGCCCCCGG,+,0.00) 38(TCGCGCCAGCCC,+,0.00) 35(CGTTCGCG,-,0.00) -73(TCCCTGCCCT,+,0.00) -157(CCCGCGGC,-,0.00),157(CCCCCGGC,-,0.00) -76(CCCTCCCTGCCC,+,0.00) 441(GCCCGACG,-,0.00) 485(CAAAAGCG,+,0.00) 321(TCTACCCG,-,0.00),451(CGGTTAAA,+,0.00) -64(TCCGCGCA,+,0.00),139(TGCGCGCT,-,0.00) 143(CGCTTGCCCCGG,-,0.00) 497(CGAGGCGG,+,0.00) 561_WT_peak_786 chr1 230778129 230778554 + 223 NA 5' UTR (NM_001145036, exon 1 of 18) 5' UTR (NM_001145036, exon 1 of 18) 139 NM_001145036 22796 Hs.211800 NM_007357 HPRD:07372 COG2 LDLC component of oligomeric golgi complex 2 protein-coding 0.115294 0.704225 -120(GGCGCAGGCCGG,-,0.00) -19(CGCGGCCGCC,-,0.00),-16(GGCCGCCGAG,+,0.00) -6(TCGGTCTG,-,0.00),205(TCGGTCGG,-,0.00) 0(TGCGCAGC,-,0.00) -151(GCGGCCCCCGCG,+,0.00),-83(GCGGCGCGGGCG,+,0.00) 151(CCCGGAGCCGGG,+,0.00) -11(CCGAGTCG,-,0.00),-10(CGAGTCGG,+,0.00) 561_WT_peak_763 chr1 228270333 228270780 + 222 NA promoter-TSS (NM_001024228) promoter-TSS (NM_001024228) 195 NM_001024226 375 Hs.286221 NM_001658 HPRD:00054 ARF1 - ADP-ribosylation factor 1 protein-coding 0.134228 0.763393 -86(AGCCGCCA,-,0.00),212(AAGTCGCT,+,0.00) 71(TCGACCCC,+,0.00),88(GGCGGCGA,-,0.00) 135(AGGCTGGGGCCC,-,0.00) 97(AGGGCCGGGC,-,0.00),123(CGGGCCGGGC,-,0.00) 19(GGCGGGGG,+,0.00),77(CCCGCGGC,-,0.00),105(GCCGGGGG,+,0.00),252(CCCCCGCC,-,0.00) -67(CAAAACCA,+,0.00) -135(CTTACCCG,-,0.00) 80(GCGGCGGCGGCG,+,0.00),83(GCGGCGGCGGCG,+,0.00),89(GCGGCGACAGGG,+,0.00),100(GCCGGGCCGGGG,+,0.00),247(CCCTGCCCCCGC,-,0.00) -161(GGGCGGAGTT,+,0.00),124(GGGCCGGGCT,+,0.00) 140(GGGGCCCGGCCG,+,0.00) 561_WT_peak_1274 chr11 47447581 47447825 + 222 NA intron (NM_002804, intron 1 of 11) intron (NM_002804, intron 1 of 11) 321 NM_002804 5702 Hs.250758 NM_002804 HPRD:01733 PSMC3 TBP1 proteasome (prosome, macropain) 26S subunit, ATPase, 3 protein-coding 0.065574 0.644898 12(TCGGCCTCATCC,+,0.00) -67(AGCCACCT,-,0.00) -102(CCCCGTCCCCGG,+,0.00),-25(CCCGGTTCCCGG,+,0.00) -156(TCCACGCC,+,0.00) -14(GACCGCCAGCTC,+,0.00) 42(TCCTGCCG,+,0.00) 561_WT_peak_3010 chr17 7155064 7155373 + 222 NA promoter-TSS (NM_001143775) promoter-TSS (NM_001143775) 41 NM_015343 23399 Hs.513913 NM_015343 HPRD:16845 CTDNEP1 DULLARD|HSA011916|NET56 CTD nuclear envelope phosphatase 1 protein-coding 0.080906 0.687097 -90(GAAGGAGGGGGA,-,0.00),-84(GGGGGAGGGGGA,-,0.00),84(TCCCCCTCCTCT,+,0.00) -45(AGCGGCCT,-,0.00),-11(TAGCCGCT,+,0.00) -163(CGGGGAGGGCGG,-,0.00),-94(CAGGGAAGGAGG,-,0.00) -156(GGCGGGGG,+,0.00) -92(GGGAAGGAGGGG,+,0.00) -13(TTTAGCCG,-,0.00) -76(GGGAGCCGGAGG,+,0.00) -155(GCGGGGGCAGCG,+,0.00) 561_WT_peak_2845 chr16 53491395 53491870 + 221 NA intron (NM_005611, intron 8 of 21) intron (NM_005611, intron 8 of 21) 23281 NM_005611 5934 Hs.513609 NM_005611 HPRD:01576 RBL2 P130|Rb2 retinoblastoma-like 2 protein-coding 0.010526 0.449580 109(TGAACAGGAAGC,+,0.00) -143(CCGCCTCG,-,0.00) -104(GCCACCATGCCC,+,0.00) 561_WT_peak_3290 chr17 60562317 60562563 + 221 NA intron (NM_006852, intron 2 of 21) intron (NM_006852, intron 2 of 21) 3966 NM_001284363 11011 Hs.445078 NM_006852 TLK2 HsHPK|PKU-ALPHA tousled-like kinase 2 protein-coding 0.016260 0.485830 -142(CCCGGGAGGCGG,-,0.00),-141(CCGGGAGGCGGG,-,0.00) 561_WT_peak_6232 chr6 27860051 27861148 + 221 NA promoter-TSS (NM_003527) promoter-TSS (NM_003527) 364 NM_003514 8336 Hs.134999 NM_003514 HPRD:09106 HIST1H2AM H2A.1|H2A/n|H2AFN|dJ193B12.1 histone cluster 1, H2am protein-coding 0.045579 0.518215 -137(CTCGGCCTCC,-,0.00) 568(GCGCGCCGGCCC,+,0.00) 40(CGCCCGGC,-,0.00) 661(GGGTTTTG,-,0.00) 164(TTTACCCA,-,0.00),557(CAGGTAAA,+,0.00) -99(ACCGCGCC,+,0.00),36(ACCGCGCC,+,0.00) 571(CGCCGGCCCCGA,-,0.00) 199(AACTCGGCCA,-,0.00),389(AACACCGCCC,-,0.00),499(GGGCTGCGTT,+,0.00) 668(GGCCTTGGCGCG,-,0.00) 561_WT_peak_7207 chr9 6412509 6413298 + 220 NA promoter-TSS (NM_152896) promoter-TSS (NM_152896) -248 NR_046386 115426 Hs.493401 NM_152896 HPRD:18257 UHRF2 NIRF|RNF107|URF2 ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase protein-coding 0.089987 0.636709 354(AACGGCTT,-,0.00) 466(GGCGTGGA,-,0.00) 393(CCGCGCCTGCCC,+,0.00),513(GAGCTCCAGCTC,+,0.00) -116(CCCGCGGC,-,0.00) 236(CCCCCTCAGCTC,+,0.00),387(CCCTCTCCGCGC,+,0.00) 261(CAAAACGG,+,0.00) 443(GCTTCCTCTTTA,-,0.00) 283(GCCGCGCA,+,0.00),540(TGCGCGGC,-,0.00) -122(GCGGGACCCGCG,+,0.00) 367(AGCCCCGCCC,-,0.00),438(GGGCCGCTTC,+,0.00) 49(CGTGGCGG,+,0.00) -28(GCGGCCAGGCGG,+,0.00),38(CCGCCAGGCCGC,-,0.00) 561_WT_peak_2307 chr14 77923953 77924322 + 220 NA promoter-TSS (NM_022067) promoter-TSS (NM_022067) -154 NM_001193314 63894 Hs.16157 NM_022067 HPRD:10710 VIPAS39 C14orf133|SPE-39|SPE39|VIPAR|VPS16B|hSPE-39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog protein-coding 0.056911 0.537838 146(GGGACGCTTT,+,0.00) 561_WT_peak_7320 chr9 86535743 86536146 + 220 NA intron (NM_017576, intron 1 of 17) CpG 436 NM_001271927 55582 Hs.697514 NM_017576 HPRD:11179 KIF27 - kinesin family member 27 protein-coding 0.106700 0.660891 169(CTCGGACGCC,-,0.00) -57(AGACGCCT,-,0.00),132(TAGTCGCT,+,0.00) 62(TCGATCGG,-,0.00) 225(CCCGCGGC,-,0.00) 9(CGACACGA,-,0.00) -13(CGTCGCAC,+,0.00),168(CCTCGGAC,+,0.00) 203(ACCGCCCA,+,0.00) 561_WT_peak_4052 chr2 44223290 44223636 + 220 NA promoter-TSS (NM_133259) promoter-TSS (NM_133259) -319 NM_133259 10128 Hs.368084 NM_133259 HPRD:06343 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine-rich pentatricopeptide repeat containing protein-coding 0.063584 0.556196 -34(AGAGGCTT,-,0.00) 52(CCCCCGCC,-,0.00) 133(AACGCGGGCC,-,0.00) 95(GACGCCATGTCC,+,0.00) 561_WT_peak_1819 chr12 98897850 98898183 + 220 NA promoter-TSS (NR_038383) promoter-TSS (NR_038383) -383 NR_038383 643770 Hs.129589 NR_038383 ENSG00000245017 LOC643770 - uncharacterized LOC643770 ncRNA 0.054054 0.514970 -1(GAGCCACAGCCC,+,0.00) -98(CCGACAGA,+,0.00) 20(TCGTGGCG,+,0.00),146(TCCTGCCG,+,0.00) -100(GTCCGACA,-,0.00),39(CGTCTGAC,+,0.00) 561_WT_peak_6030 chr5 175816224 175816622 + 220 NA promoter-TSS (NM_001256539) promoter-TSS (NM_001256539) 639 NM_138820 192286 Hs.534575 NM_138820 HPRD:14483 HIGD2A RCF1b HIG1 hypoxia inducible domain family, member 2A protein-coding 0.052764 0.619048 37(TCGCCGCC,+,0.00) 9(CGCTCTCAGCTC,+,0.00) 180(CGTGGGAC,+,0.00) 150(CAAAACCC,+,0.00) 39(GCCGCCCA,+,0.00) -102(GCGGGGCCCGAC,+,0.00) -49(GGCCACGGCGGC,-,0.00) 132(GCTCCGCAGA,-,0.00) 561_WT_peak_5421 chr4 15657154 15657498 + 220 NA promoter-TSS (NM_001193534) promoter-TSS (NM_001193534) -291 NM_001193535 26234 Hs.643433 NM_012161 HPRD:05739 FBXL5 FBL4|FBL5|FLR1 F-box and leucine-rich repeat protein 5 protein-coding 0.066860 0.620290 165(CCCGGCCGCC,-,0.00) 50(CCGACGCC,+,0.00) -50(GCGCTTCTCCCG,-,0.00) 106(CCTTCGCCTCCC,-,0.00) 162(CACCCCGGCCGC,-,0.00) 561_WT_peak_3927 chr19 58513714 58514691 + 220 NA promoter-TSS (NR_036508) promoter-TSS (NR_036508) -60 NR_036508 100128398 Hs.655081 NR_036508 ENSG00000176593 LOC100128398 - uncharacterized LOC100128398 ncRNA 0.105425 0.676892 495(CCACCCTCCTCC,+,0.00) 285(TGGCGGCT,+,0.00),770(AAGTCTCT,+,0.00) 97(GCGGGAGGCCGG,-,0.00) 301(GGCGTCGA,-,0.00),362(GGCGTCGG,-,0.00),448(TGCGTCGA,-,0.00),452(TCGAAGCC,+,0.00),739(TCGACGGC,+,0.00) 65(CCGTCCGA,+,0.00) 318(GCCGCGGG,+,0.00) -129(TCGTCCCG,+,0.00),462(CGGCAGGA,-,0.00) -158(GACCGACG,-,0.00),66(CGTCCGAC,+,0.00),67(GTCCGACC,-,0.00),364(CGTCGGGC,+,0.00) -161(CAAGACCG,+,0.00),149(CAAAGCCG,+,0.00) 508(CCGTCGCCTCCC,-,0.00) 7(GGCGCGGC,-,0.00),399(GCCGCGCC,+,0.00) 184(CCCTGACGCCGC,-,0.00) 31(CGCGGAGCCGAC,+,0.00),543(CGCGGCCCCGCG,+,0.00),543(CGCGGCCCCGCG,-,0.00) 397(GGGCCGCGCC,+,0.00),421(GGGCGGGGTT,+,0.00) -155(CGACGCGG,+,0.00),-147(CCGCGACG,-,0.00),405(CCGCCTCG,-,0.00) 280(GACAATGGCGGC,-,0.00),378(GCCGCCATGACA,+,0.00) -148(GCCGCGACGC,+,0.00),-84(GCGGCGCAGC,+,0.00),-84(GCGGCGCAGC,-,0.00),226(GCCCCGCAGC,-,0.00) 56(CACCCAGGCCCG,-,0.00) 561_WT_peak_877 chr10 8374293 8374818 + 220 NA Intergenic Intergenic -64287 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA 0.062857 0.602662 -3(TGCGGCCGAG,+,0.00) 185(CAGCCCCGGCCC,+,0.00) -24(CGCGCACG,+,0.00) 100(CAAAACAG,+,0.00) -15(TAAGCAGGAAGC,+,0.00) -120(TGGGCGGC,-,0.00),-26(AGCGCGCA,+,0.00) 188(CCCCGGCCCCGC,-,0.00) 189(CCCGGCCCCGCG,-,0.00),255(CGCGGAGCTGCT,+,0.00) -52(GCGGCTGGGCTG,+,0.00),-2(GCGGCCGAGCTG,+,0.00) 561_WT_peak_2396 chr14 106765174 106765526 + 220 NA Intergenic Intergenic 21081 NR_033375 338004 Hs.569411 NR_033375 ENSG00000229084 LINC00226 C14orf97|NCRNA00226 long intergenic non-protein coding RNA 226 ncRNA 0.036932 0.623229 561_WT_peak_7182 chr8 144699644 144700122 + 220 NA promoter-TSS (NM_003313) promoter-TSS (NM_003313) -151 NM_003313 7264 Hs.404119 NM_003313 HPRD:00654 TSTA3 FX|P35B|SDR4E1 tissue specific transplantation antigen P35B protein-coding 0.135983 0.764092 35(CTCGTCCGCC,-,0.00) -133(AGCGGCTT,-,0.00),14(AAGCCGCT,+,0.00),15(AGCCGCTT,-,0.00) -39(CCGGGGGCGCGC,-,0.00) 185(GGCGTCGG,-,0.00) 150(GAGGGCCAGCCG,+,0.00) -81(GGGGCCGGGA,-,0.00) 180(CCCGCGGC,-,0.00) 291(TCGCGCCG,+,0.00) 38(GTCCGCCG,-,0.00),187(CGTCGGAA,+,0.00) 12(CAAAGCCG,+,0.00) -149(CCGCCGGCTCCC,-,0.00) -100(GCGGAGCCAGGT,+,0.00),-83(GCGGGGCCGGGA,+,0.00),41(CGCCGGCCGCGC,-,0.00) -101(CGCGGAGCCAGG,+,0.00) 293(GCGCCGCAGC,-,0.00) 212(GGGGCCAGGCGG,+,0.00) 561_WT_peak_4270 chr2 114361585 114362050 + 219 NA promoter-TSS (NR_024004) promoter-TSS (NR_024004) -523 NR_024004 84771 Hs.712940 NR_024004 ENSG00000236397 DDX11L2 - DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 like 2 pseudo 0.062366 0.641631 -149(CGTACCCG,-,0.00) 561_WT_peak_1918 chr12 125406128 125406499 + 219 NA Intergenic tRNA-Ala-GCG|tRNA|tRNA 6220 NR_049820 100847004 NR_049820 miRBase:MI0018167 MIR5188 - microRNA 5188 ncRNA 0.024259 0.419355 138(TTTTCCTGTTTC,-,0.00) 561_WT_peak_6750 chr7 92158010 92158383 + 219 NA promoter-TSS (NM_001282678) promoter-TSS (NM_001282678) 109 NM_032120 84060 Hs.21590 NM_032120 HPRD:13173 RBM48 C7orf64|DKFZP564O0523|HSPC304 RNA binding motif protein 48 protein-coding 0.069705 0.537433 86(TCGCTCTCCTCG,+,0.00) -44(GGCGTCGA,-,0.00) 52(TCGTGCTG,+,0.00),146(AGGCACGA,-,0.00) 561_WT_peak_6243 chr6 28863649 28864260 + 219 NA promoter-TSS (NR_104117) promoter-TSS (NR_104117) -353 NR_104117 414760 Hs.211005 NR_104117 HCG14 dJ111M5.4 HLA complex group 14 (non-protein coding) ncRNA 0.057283 0.516340 37(CTCGGCCTCC,-,0.00) 94(AGCCGATT,-,0.00),413(AGCCACTT,-,0.00) -126(CCGCCTCCCGGG,+,0.00) -28(TAGAGACG,-,0.00) 75(ACCGCGCC,+,0.00) -89(CCGAGTAG,-,0.00),34(CGTCTCGG,+,0.00) 561_WT_peak_2117 chr14 21152005 21152476 + 219 NA promoter-TSS (NM_001145) promoter-TSS (NM_001145) -96 NM_001145 283 Hs.283749 NM_001145 HPRD:00105 ANG ALS9|HEL168|RAA1|RNASE4|RNASE5 angiogenin, ribonuclease, RNase A family, 5 protein-coding 0.033970 0.487288 79(CGTGGCTA,+,0.00) 295(GGGAGCAGAAGC,+,0.00) 561_WT_peak_6452 chr6 117923786 117924033 + 219 NA promoter-TSS (NM_020399) promoter-TSS (NM_020399) -204 NM_020399 57120 Hs.191539 NM_020399 HPRD:06024 GOPC CAL|FIG|GOPC1|PIST|dJ94G16.2 golgi-associated PDZ and coiled-coil motif containing protein-coding 0.060729 0.572581 -157(AGCGGCCT,-,0.00) -156(GCGGCCTGTCAG,+,0.00) 561_WT_peak_3586 chr19 4724510 4724862 + 219 NA promoter-TSS (NM_139159) promoter-TSS (NM_139159) -831 NM_139159 91039 Hs.515081 NM_139159 HPRD:07001 DPP9 DP9|DPLP9|DPRP-2|DPRP2 dipeptidyl-peptidase 9 protein-coding 0.051136 0.433428 -119(GGAGGAAGGCGG,-,0.00) 561_WT_peak_6240 chr6 28806139 28806447 + 219 NA Intergenic Intergenic 25161 NR_033379 401242 Hs.448285 NR_033379 ENSG00000225595 LOC401242 - uncharacterized LOC401242 ncRNA 0.032468 0.420712 116(AGGTTTTG,-,0.00) 561_WT_peak_7625 chrX 153236797 153237817 + 219 NA promoter-TSS (NM_005334) promoter-TSS (NM_005334) -488 NM_005334 3054 Hs.83634 NM_005334 HPRD:02061 HCFC1 CFF|HCF-1|HCF1|HFC1|MRX3|PPP1R89|VCAF host cell factor C1 protein-coding 0.102941 0.672870 355(CGAGGAGGCGGA,-,0.00) -60(CGGGCCGGAGGC,+,0.00) -153(AGCCGCCA,-,0.00),72(AGCCGCCA,-,0.00),201(AGCCGCTT,-,0.00),293(AGCCGCCA,-,0.00),425(AAGCCTCT,+,0.00),587(AGCCGCCA,-,0.00),636(AGCGACTT,-,0.00) 568(TCCACGCC,+,0.00),627(GGCGTCAA,-,0.00) -12(GGGCTCGCGCCG,-,0.00) 619(CGTCCGCG,-,0.00) 346(GCGGTCGG,-,0.00) 457(GGCGGGGG,+,0.00),611(CGCCCGGC,-,0.00) -8(TCGCGCCG,+,0.00),803(CGGCACGC,-,0.00) 249(CAGAAGAAGCGG,+,0.00),381(CCGCTTCCCCCC,-,0.00) 635(TAGCGACT,-,0.00) 707(CTCCGACG,-,0.00) 842(GCCGCGCC,+,0.00) 337(GCGGCGCCGGCG,+,0.00),530(GGCGCGCCCCGC,-,0.00),607(CCCTCGCCCGGC,-,0.00) 361(GGCGGAGCCGGG,+,0.00) 61(GCCGCCGTGGGA,+,0.00) -130(GCTTCCCCGC,-,0.00),408(GCTTCGCCCC,-,0.00),450(GCCTCGCGGC,-,0.00) 561_WT_peak_4410 chr2 196428916 196429194 + 219 NA Intergenic Intergenic -92477 NM_001127257 57181 Hs.650158 NM_020342 HPRD:10572 SLC39A10 LZT-Hs2 solute carrier family 39 (zinc transporter), member 10 protein-coding 0.014388 0.362007 -159(TGGTTTTG,-,0.00) 561_WT_peak_2604 chr15 91191447 91191912 + 219 NA intron (NR_120372, intron 2 of 3) MER41B|LTR|ERV1 -11786 NR_120371 101929765 Hs.615348 NR_120371 ENSG00000245479 LOC101929765 - uncharacterized LOC101929765 ncRNA 0.010753 0.478541 233(CAAAACCA,+,0.00) 82(TGGGTAAA,+,0.00) 197(AAAACAGGATGC,+,0.00) 561_WT_peak_832 chr1 245133086 245133924 + 218 NA promoter-TSS (NR_026587) promoter-TSS (NR_026587) -126 NM_001290327 84288 Hs.134857 NM_032328 HPRD:14423 EFCAB2 CFAP200|DRC8 EF-hand calcium binding domain 2 protein-coding 0.097852 0.700834 -50(GGAGGAGGCCGG,-,0.00),650(TCGCCCTGCCCC,+,0.00) -100(GCAGCCGGGCCG,-,0.00) 419(CGCGGCCGAG,+,0.00),473(GGCGGACGAG,+,0.00) -128(CCGGGAGGGCAG,-,0.00),314(CCTCCTCCCCGC,+,0.00),510(CCGGGGAGCCGC,-,0.00),537(CCGCGACCCCGG,+,0.00) 527(TCGCCGCC,+,0.00) -122(GGGCAGGCGCGG,-,0.00),298(GGGCGCGCGCTC,-,0.00) 180(AGGCCCGGGA,-,0.00) -38(GCCGCGGG,+,0.00),226(GCCGGGGG,+,0.00),390(GCCGCGGG,+,0.00) 277(TCGTGGCG,+,0.00) 524(CCCTCGCCGCCC,+,0.00) 64(CGTCGCAC,+,0.00) -117(GGCGCGGC,-,0.00) 511(CGGGGAGCCGCT,+,0.00) -94(GGGCCGCTTC,+,0.00),362(AGAGCGGCCC,-,0.00) -89(GCTTCCCGGC,-,0.00),390(GCCGCGGGGC,+,0.00),458(GCTCCGCAGC,-,0.00) -99(CAGCCGGGCCGC,-,0.00),-45(AGGCCGGGCCGC,-,0.00) 561_WT_peak_2074 chr13 77600998 77601334 + 218 NA 5' UTR (NM_012158, exon 1 of 5) 5' UTR (NM_012158, exon 1 of 5) 165 NM_012158 26224 Hs.508284 NM_012158 HPRD:05737 FBXL3 FBL3|FBL3A|FBXL3A F-box and leucine-rich repeat protein 3 protein-coding 0.125000 0.724036 -158(CGGGGACGGCGG,-,0.00) 93(CGCGTAAG,+,0.00) -135(CCCGCGGC,-,0.00) 18(CCTTCTCAGTCC,+,0.00) -159(CCGGGGACGGCG,+,0.00),-112(CCCTGGCCCCCC,-,0.00),-50(CGCTGGTCCCGC,-,0.00),52(CCCCGGCGCCGC,-,0.00) -90(CCCGCAGCCGCG,+,0.00),-82(CGCGGCCCCCCG,-,0.00),-26(CGCGGCTCCACC,-,0.00),53(CCCGGCGCCGCG,+,0.00),53(CCCGGCGCCGCG,-,0.00),151(CGCGGCCGCGCG,-,0.00) -28(AACGCGGCTC,-,0.00) 561_WT_peak_689 chr1 204380570 204381044 + 218 NA 5' UTR (NM_032833, exon 1 of 2) 5' UTR (NM_032833, exon 1 of 2) 138 NM_032833 84919 Hs.304376 NM_032833 HPRD:17892 PPP1R15B CREP protein phosphatase 1, regulatory subunit 15B protein-coding 0.107595 0.663158 42(CGGGGAAGGAGG,-,0.00) -91(GGCGTCGC,-,0.00),13(GGCGGCGA,-,0.00),67(TCGACGCT,+,0.00),247(TAGACGCC,+,0.00),276(GGCGTCTA,-,0.00) 121(CCGACTGA,+,0.00) 63(CGGCTCGA,-,0.00),231(CGGCAGGA,-,0.00) -89(CGTCGCTG,+,0.00),284(CGTCCCTA,+,0.00),290(TAGCGCCG,-,0.00) 2(CCCGCGCA,+,0.00),294(GCCGCGCC,+,0.00),299(GCCGCCCA,+,0.00) 215(CGCAGGGCCCGC,-,0.00),216(GCAGGGCCCGCG,+,0.00) 58(CTAGTCGG,+,0.00) -90(GCGTCGCTGC,-,0.00) 561_WT_peak_2548 chr15 73075830 73076400 + 218 NA promoter-TSS (NM_031284) promoter-TSS (NM_031284) 11 NR_023318 83440 Hs.654636 NM_031284 HPRD:12429 ADPGK 2610017G09Rik|ADP-GK ADP-dependent glucokinase protein-coding 0.115789 0.695271 250(GGAGGAGGTGGG,-,0.00) -121(CGGGGGAGACGG,-,0.00),294(CCCCCTTCCCGG,+,0.00) 9(CGCGTACG,+,0.00),11(CGTACGCG,-,0.00) -162(CCGCACGA,-,0.00) 378(GTGAAGAAGCGG,+,0.00) 235(CGGTGTTG,-,0.00),269(CGGTTGTG,-,0.00) 21(GCCGCGCC,+,0.00) 44(CCCAGGCGCCGC,-,0.00),178(GCGGCGCCAGGA,+,0.00) 15(CGCGGAGCCGCG,+,0.00),15(CGCGGAGCCGCG,-,0.00) 176(GGGCGGCGCC,+,0.00) 31(AGCGCCATGGGG,+,0.00),33(CGCCATGGGGAC,-,0.00) -48(GCCTGGCAGC,-,0.00) 561_WT_peak_557 chr1 156182818 156183043 + 218 NA TTS (NR_104408) TTS (NR_104408) 151 NM_001199663 100527963 Hs.530479 NM_001199661 ENSG00000260238 PMF1-BGLAP PMF1 PMF1-BGLAP readthrough protein-coding 0.080000 0.592920 -63(TCGACACC,+,0.00),-27(TCGCCGCC,+,0.00) -92(CGGCACTA,-,0.00) -17(CAGGTAAA,+,0.00) 561_WT_peak_4079 chr2 55920772 55921177 + 218 NA promoter-TSS (NM_033109) promoter-TSS (NM_033109) 71 NM_033109 87178 Hs.388733 NM_033109 HPRD:18493 PNPT1 COXPD13|DFNB70|OLD35|PNPASE|old-35 polyribonucleotide nucleotidyltransferase 1 protein-coding 0.081481 0.593596 -17(GGAGCCGGAGGC,+,0.00) -9(AGGCACGA,-,0.00),29(CGGCACGC,-,0.00) -18(CGGAGCCGGAGG,+,0.00) 82(GGGCGGAGCC,+,0.00) -56(CCCGCCGTGGCA,+,0.00),15(GCCGCCATGACA,+,0.00) 561_WT_peak_6230 chr6 27840811 27841727 + 218 NA promoter-TSS (NM_003546) promoter-TSS (NM_003546) 20 NM_003546 8368 Hs.533295 NM_003546 HPRD:11922 HIST1H4L H4.k|H4/k|H4FK histone cluster 1, H4l protein-coding 0.053493 0.499455 1(CTCAGCCGCC,-,0.00) 4(AGCCGCCA,-,0.00) 188(TCCACGCC,+,0.00),202(GGCGTCGG,-,0.00) 412(CCGGTCGG,-,0.00) 204(CGTCGGAT,+,0.00) -121(CAAAACTG,+,0.00) 44(CGCGTAAA,+,0.00) 299(GCCGCGCC,+,0.00) 373(AAATCGGACC,-,0.00) 26(GCGGCCCTGGCG,+,0.00) 345(GCCTCGCAGC,-,0.00) 561_WT_peak_4430 chr2 201577862 201578239 + 218 NA non-coding (NR_037886, exon 3 of 3) non-coding (NR_037886, exon 3 of 3) 17604 NR_001557 344454 Hs.148269 NR_001557 AOX2P AOH2|AOX2 aldehyde oxidase 2 pseudogene pseudo 0.037135 0.515873 -148(CGTCCGCG,-,0.00) 197(TTTAACCG,-,0.00) -145(CCGCGTAG,-,0.00) 561_WT_peak_2535 chr15 69110165 69110801 + 217 NA intron (NM_006305, intron 1 of 6) CpG 2778 NM_006305 8125 Hs.458747 NM_006305 HPRD:09014 ANP32A C15orf1|HPPCn|I1PP2A|LANP|MAPM|PHAP1|PHAPI|PP32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding 0.097484 0.671900 -162(CCTGCCTCCTCC,+,0.00) -23(AGGCGGCT,+,0.00) 211(CCGGGGAGGAGG,-,0.00) 4(TCGGCGCC,+,0.00),274(GGCGTCGC,-,0.00) 234(CGGCGCGAGCCC,+,0.00) 126(CGCGTACT,+,0.00) -110(CCCCCGCC,-,0.00),-60(CGCCCGGC,-,0.00),137(CCCCCGCC,-,0.00) -50(TCGTGCCA,+,0.00),234(CGGCGCGA,-,0.00) -116(CCGCTCCCCCCG,-,0.00) 91(CAAAACCA,+,0.00) 317(AGGTGCCGAAGG,+,0.00) -115(CGCTCCCCCCGC,-,0.00),115(GGCCGGCCCCGC,-,0.00),224(GCGGGGCGTGCG,+,0.00),233(GCGGCGCGAGCC,+,0.00) 276(CGTCGCGG,+,0.00) -31(GGCCCTGGAGGC,-,0.00),279(CGCGGCATGGCC,+,0.00) 275(GCGTCGCGGC,-,0.00) 561_WT_peak_4291 chr2 128568262 128568788 + 217 NA intron (NM_001006623, intron 1 of 7) CpG 236 NM_001006622 55339 Hs.554831 NM_018383 HPRD:11680 WDR33 NET14|WDC146 WD repeat domain 33 protein-coding 0.081749 0.620493 260(TCCCGCTCCTCC,+,0.00) 280(AGCCGCCA,-,0.00) -97(TCGTCGCC,+,0.00),144(TCGCCGCC,+,0.00) -54(CCGCTTTTCCCG,-,0.00) -96(CGTCGCCA,+,0.00),343(CGGCGCTA,+,0.00) -50(TTTTCCCG,-,0.00) -57(TGGCCGCTTT,+,0.00) 561_WT_peak_6454-2 chr6 119214612 119215019 + 217 NA promoter-TSS (NM_014034) promoter-TSS (NM_014034) -426 NM_014034 25842 Hs.292316 NM_014034 HPRD:16459 ASF1A CGI-98|CIA|HSPC146 anti-silencing function 1A histone chaperone protein-coding 0.034398 0.424020 -22(TCGTGCCT,+,0.00) 169(CAGCAAGGCCGG,-,0.00) 561_WT_peak_1209 chr11 10829935 10830538 + 217 NA promoter-TSS (NR_120540) promoter-TSS (NR_120540) 346 NM_001418 1982 Hs.183684 NM_001418 HPRD:09084 EIF4G2 AAG1|DAP5|NAT1|P97 eukaryotic translation initiation factor 4 gamma, 2 protein-coding 0.082919 0.627483 321(AGCCGCCA,-,0.00) -101(GGCGTCGG,-,0.00) -149(CCGTCCGA,+,0.00),-128(TCGGTCCG,-,0.00) -99(CGTCGGCC,+,0.00) -32(GCAACAGGAAGA,+,0.00) 130(GCGGCGGCAGCG,+,0.00) 47(CCCGGCTCCGCC,-,0.00) -123(CCGCCACG,-,0.00) -124(TCCGCCACGGCC,+,0.00),-87(GGCCATGACCGC,-,0.00) -72(GCGGCCTGGCCA,+,0.00) 561_WT_peak_191 chr1 39662543 39662863 + 217 NA intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 112864 NM_012090 23499 Hs.472475 NM_012090 HPRD:09750 MACF1 ABP620|ACF7|MACF|OFC4 microtubule-actin crosslinking factor 1 protein-coding 0.003125 0.414330 73(AACCACTT,-,0.00) 561_WT_peak_205 chr1 43232890 43233357 + 217 NA promoter-TSS (NM_022356) promoter-TSS (NM_022356) 207 NR_040733 79078 Hs.148845 NM_024097 HPRD:14714 C1orf50 - chromosome 1 open reading frame 50 protein-coding 0.094218 0.688034 -47(CGGACCGA,+,0.00) -3(AGGCCAGGGA,-,0.00) 150(CCCCCGGC,-,0.00) 213(TCGTGGCG,+,0.00) 78(GGCCGACG,-,0.00) -59(GCCGCGCC,+,0.00),249(GGCGCGGC,-,0.00) 12(GCGGGGCGGGAG,+,0.00),250(GCGCGGCCGGGG,+,0.00),255(GCCGGGGCAGCG,+,0.00) 63(CGGGGCTCCGCG,-,0.00) -148(AGCTCCGCCC,-,0.00) 156(GCGGCCTGGCCC,+,0.00) 561_WT_peak_6454 chr6 119214365 119214560 + 217 NA promoter-TSS (NM_014034) promoter-TSS (NM_014034) -779 NM_014034 25842 Hs.292316 NM_014034 HPRD:16459 ASF1A CGI-98|CIA|HSPC146 anti-silencing function 1A histone chaperone protein-coding 0.010256 0.403061 -103(CGGTTTAG,-,0.00) 561_WT_peak_6181 chr6 26553578 26553875 + 217 NA Intergenic Intergenic 15154 NM_006353 10473 Hs.236774 NM_006353 HMGN4 HMG17L3|NHC high mobility group nucleosomal binding domain 4 protein-coding 0.040404 0.469799 561_WT_peak_4415 chr2 197040779 197041181 + 216 NA Intergenic Intergenic -4644 NM_004226 9262 Hs.88297 NM_004226 HPRD:05289 STK17B DRAK2 serine/threonine kinase 17b protein-coding 0.017413 0.449132 36(AGCCACCT,-,0.00),114(AGGTGTCT,+,0.00) 561_WT_peak_665 chr1 193090892 193091595 + 216 NA 5' UTR (NM_024529, exon 1 of 17) 5' UTR (NM_024529, exon 1 of 17) 155 NM_024529 79577 Hs.378996 NM_024529 HPRD:09581 CDC73 C1orf28|FIHP|HPTJT|HRPT1|HRPT2|HYX cell division cycle 73 protein-coding 0.096728 0.666193 179(GGAGGAGGAGGA,-,0.00),188(GGAAGAGGGCGA,-,0.00) 89(CTCGGCGGCC,-,0.00) 170(GGCGGCGA,-,0.00) -119(CCCGTACG,+,0.00),-117(CGTACGTG,-,0.00),-106(CGTACGTG,-,0.00),125(CGTAGGCG,-,0.00) -134(CGCCCGGC,-,0.00) 521(CGGGGAAA,+,0.00) 337(GGGAGACGAAGT,+,0.00) -98(GGCGCGGT,-,0.00),223(GGCGCGGC,-,0.00) 226(GCGGCGGCAGCG,+,0.00) -11(CGCGGCTCCCCC,-,0.00) 440(GGGCAGAGTT,+,0.00) 164(CGTCGCGG,+,0.00) -4(CCCCCTGGCGGC,-,0.00) 58(GCGGCGGGGC,+,0.00),171(GCGGCGAAGG,+,0.00),235(GCGGCGGCGC,+,0.00) 93(GCGGCCTGGGTG,+,0.00) 561_WT_peak_3922 chr19 58238750 58239167 + 216 NA promoter-TSS (NM_024833) promoter-TSS (NM_024833) 37 NM_024833 79891 Hs.180402 NM_024833 HPRD:08031 ZNF671 - zinc finger protein 671 protein-coding 0.074341 0.626794 -94(AGGCGTCT,+,0.00) -87(TCGATCGG,-,0.00) -103(GGGAGCGGCAGG,+,0.00) -42(CGTCTCGG,+,0.00) 561_WT_peak_6719 chr7 74508546 74508901 + 215 NA intron (NM_001003795, intron 1 of 15) CpG 376 NM_173537 84163 Hs.647017 NM_173537 HPRD:16402 GTF2IRD2 FP630|GTF2IRD2 alpha|GTF2IRD2A GTF2I repeat domain containing 2 protein-coding 0.123944 0.744382 -132(CCGACGCC,+,0.00),-123(CCGACGCC,+,0.00) 159(CGTACGTG,-,0.00) -141(CCCCCGCC,-,0.00),-54(CGCCCGGC,-,0.00),66(GCCGCGGG,+,0.00) 156(CGTCGTAC,+,0.00) -146(CCCCGCCCCCGC,-,0.00),-134(CGCCGACGCCGC,-,0.00),-125(CGCCGACGCCGC,-,0.00) 53(GCGGGGAAGC,+,0.00) -55(CCGCCCGGCCGC,-,0.00) 561_WT_peak_4884 chr22 31318164 31318486 + 215 NA promoter-TSS (NR_026920) promoter-TSS (NR_026920) 30 NR_026920 150291 Hs.592202 NM_153044 HPRD:08191 MORC2-AS1 C22orf27|NCRNA00325 MORC2 antisense RNA 1 ncRNA 0.090062 0.594427 -20(AGGCGTCT,+,0.00) -31(CAAAACCA,+,0.00),39(CATAACCG,+,0.00) -4(CCGCCTCG,-,0.00) 561_WT_peak_91 chr1 19933391 19933600 + 215 NA promoter-TSS (NR_077246) promoter-TSS (NR_077246) -806 NR_077246 644068 Hs.660760 NR_077246 RPS14P3 RPS14_1_16 ribosomal protein S14 pseudogene 3 pseudo 0.000000 0.342857 -135(GAAAAAGAAAGC,+,0.00) 561_WT_peak_3478 chr18 29671655 29672322 + 215 NA promoter-TSS (NM_001191324) promoter-TSS (NM_001191324) 170 NM_016271 51444 Hs.302408 NM_016271 HPRD:11508 RNF138 HSD-4|NARF|STRIN|hNARF ring finger protein 138, E3 ubiquitin protein ligase protein-coding 0.101949 0.664671 166(GGCGGCGGGCGA,-,0.00) -43(GCGGGGAGGCGC,-,0.00),412(CCGGGGTGCCGG,-,0.00),420(CCGGGAAGCGGG,-,0.00) 106(CGCGTTCG,+,0.00) -64(TCCCGGGCCT,+,0.00) -55(TAGCGAGG,-,0.00),276(TAGCGGCG,-,0.00) -40(GGGAGGCGCAGG,+,0.00) 312(GGGCCGGGTC,+,0.00) -52(CGAGGCGG,+,0.00) 266(GCTGCGAAGA,+,0.00),419(GCCGGGAAGC,+,0.00) 561_WT_peak_4690 chr20 52226105 52226518 + 215 NA Intergenic Intergenic -26675 NM_006526 7764 Hs.155040 NM_006526 HPRD:04272 ZNF217 ZABC1 zinc finger protein 217 protein-coding 0.019370 0.415459 78(CCCTCCGGGCCA,-,0.00) 91(GCTTCCCGGC,-,0.00) 561_WT_peak_1569 chr12 7079892 7080294 + 215 NA promoter-TSS (NM_001144831) promoter-TSS (NM_001144831) 149 NM_006331 10436 Hs.744040 NM_006331 HPRD:12803 EMG1 C2F|Grcc2f|NEP1 EMG1 N1-specific pseudouridine methyltransferase protein-coding 0.057214 0.560794 -149(CGCATACG,+,0.00) -137(TCCCGCCCCT,+,0.00) 16(CGGTATTG,-,0.00) 34(GCCGCGCC,+,0.00) 111(CAAGCGGCCC,-,0.00) 120(CCGACTAG,-,0.00) 561_WT_peak_4590 chr20 26188715 26189205 + 215 NA promoter-TSS (NR_030386) promoter-TSS (NR_030386) -46 NR_030386 724033 NR_030386 miRBase:MI0003672 MIR663A MIR663|MIRN663|hsa-mir-663|hsa-mir-663a microRNA 663a ncRNA 0.126531 0.747454 300(GGCGGAGGGGGG,-,0.00) -81(GGCGGCTGAG,+,0.00) -151(CGGGGAAGGGGG,-,0.00) 114(TCAACGCC,+,0.00) -127(AGGGCCGGGG,-,0.00) -31(GCCGCGGG,+,0.00),5(CCCGCGGC,-,0.00) 219(CGGCCCGA,-,0.00) 194(CGTGGGAC,+,0.00),317(CGCCGGAC,+,0.00) 36(CCCTCGGCACCC,-,0.00) -123(CCGGGGACCGCG,+,0.00),69(CCCTGGTCCCGC,-,0.00) 7(CGCGGCGCCCCG,+,0.00),7(CGCGGCGCCCCG,-,0.00) 197(GGGACGCTTT,+,0.00) 264(CGACTCGG,+,0.00) 561_WT_peak_2297 chr14 75716230 75716579 + 215 NA Intergenic Intergenic -29077 NM_005252 2353 Hs.25647 NM_005252 HPRD:01275 FOS AP-1|C-FOS|p55 FBJ murine osteosarcoma viral oncogene homolog protein-coding 0.022923 0.474286 561_WT_peak_2281 chr14 73957670 73958024 + 215 NA exon (NM_024644, exon 1 of 1) exon (NM_024644, exon 1 of 1) 208 NM_024644 79697 Hs.509916 NM_024644 C14orf169 MAPJD|NO66|ROX|hsNO66 chromosome 14 open reading frame 169 protein-coding 0.112994 0.709859 -71(GGCGGCCGAA,+,0.00) 127(CCGGTGGGGCGG,-,0.00) 92(GGAGTCGA,-,0.00),96(TCGACGGC,+,0.00) -21(GCCCTGCCCT,+,0.00) -152(CCCCCGGC,-,0.00),-142(GCCGGGCG,+,0.00) 101(GGCCGACG,-,0.00) -158(GCTTCGCCCC,-,0.00),14(GCTGCGAAGT,+,0.00) 561_WT_peak_4096 chr2 64083281 64083630 + 215 NA exon (NM_006759, exon 2 of 10) exon (NM_006759, exon 2 of 10) 14441 NM_006759 7360 Hs.516217 NM_006759 HPRD:08934 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding 0.005731 0.425714 150(CCCCCGCC,-,0.00) 48(CGGCAAGA,-,0.00) 561_WT_peak_6356 chr6 57038047 57038295 + 214 NA intron (NM_004282, intron 1 of 2) intron (NM_004282, intron 1 of 2) 1067 NM_004282 9532 Hs.745046 NM_004282 BAG2 BAG-2|dJ417I1.2 BCL2-associated athanogene 2 protein-coding 0.048387 0.485944 14(CGCGGACG,+,0.00) -29(TCGTGCAG,+,0.00) -104(CAAAACCA,+,0.00) 561_WT_peak_6221 chr6 27798893 27799536 + 214 NA promoter-TSS (NM_003541) promoter-TSS (NM_003541) 91 NM_003541 8362 Hs.528055 NM_003541 HPRD:11916 HIST1H4K H4/d|H4F2iii|H4FD|dJ160A22.1 histone cluster 1, H4k protein-coding 0.082426 0.574534 323(CGGACCGA,+,0.00) 200(TAGCGCCG,-,0.00) -55(CGAAACCG,+,0.00),395(CCAAACCG,+,0.00) 68(CCTTCAGCACCC,-,0.00) 426(GCTTCTTGTTTC,-,0.00) -39(GCGGCCCTGGCG,+,0.00) -123(GCTCCTCAGC,-,0.00) 561_WT_peak_4160 chr2 75937622 75938126 + 214 NA promoter-TSS (NM_001201334) promoter-TSS (NM_001201334) -142 NM_001201334 6936 Hs.303808 NM_003203 HPRD:01791 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding 0.123016 0.728713 43(GCGGCCTCCTCC,+,0.00) 289(GGCCGCCGAG,+,0.00) -47(AGCCGCTT,-,0.00) 99(TCGGCGCC,+,0.00),128(TCGGCGCC,+,0.00) -60(CGTCCGCG,-,0.00) -130(CCCGCGGC,-,0.00),210(CGCCCGGC,-,0.00) 96(CCCTCGGCGCCC,-,0.00),320(CCTTCTGCTCAC,-,0.00) 280(GCCGCGCC,+,0.00) -52(CGGGGAGCCGCT,+,0.00) -48(GAGCCGCTTT,+,0.00),-14(GACCCGGCCC,-,0.00),58(GGGCGGCTCT,+,0.00) -93(GCTTCCCCGC,-,0.00) 561_WT_peak_1732 chr12 57082351 57082773 + 213 NA promoter-TSS (NM_001282602) promoter-TSS (NM_001282602) -370 NM_001282605 10728 Hs.50425 NM_006601 HPRD:06138 PTGES3 P23|TEBP|cPGES prostaglandin E synthase 3 (cytosolic) protein-coding 0.035545 0.527187 104(CTTGGCGG,+,0.00) 561_WT_peak_4083-2 chr2 61244621 61244770 + 213 NA promoter-TSS (NM_002618) promoter-TSS (NM_002618) -117 NM_002618 5194 Hs.161377 NM_002618 HPRD:03475 PEX13 NALD|PBD11A|PBD11B|ZWS peroxisomal biogenesis factor 13 protein-coding 0.020134 0.466667 -141(TTTACCCT,-,0.00) 561_WT_peak_3061 chr17 18218527 18219061 + 213 NA promoter-TSS (NM_004618) promoter-TSS (NM_004618) 200 NM_144775 140775 Hs.592944 NM_144775 SMCR8 - Smith-Magenis syndrome chromosome region, candidate 8 protein-coding 0.086142 0.618692 -118(GCTTCCGGGTCA,-,0.00) 349(CGCGTCGA,-,0.00) -5(GGGCAGTGAGGG,-,0.00) 144(CGCCGGAC,+,0.00) 131(TGCTGGCCGCGC,-,0.00) -69(GGCGGCGCCGCG,+,0.00),-69(GGCGGCGCCGCG,-,0.00),-32(CTAGGAGCCGCG,+,0.00) -25(CCGCGACG,-,0.00) 177(GCGGCCTTGGCG,+,0.00) 561_WT_peak_4083 chr2 61244292 61244559 + 213 NA promoter-TSS (NM_002618) promoter-TSS (NM_002618) -387 NM_002618 5194 Hs.161377 NM_002618 HPRD:03475 PEX13 NALD|PBD11A|PBD11B|ZWS peroxisomal biogenesis factor 13 protein-coding 0.059925 0.544776 -129(CCTTCCGGCCCT,-,0.00) -127(TTCCGGCCCT,+,0.00) 561_WT_peak_2082 chr13 95201302 95202123 + 213 NA Intergenic CpG 46799 NM_014305 23483 Hs.12393 NM_014305 HPRD:15494 TGDS SDR2E1|TDPGD TDP-glucose 4,6-dehydratase protein-coding 0.065773 0.577859 177(GGCGCCGA,-,0.00) 163(CGTTCGCG,-,0.00),219(CGCGCACG,+,0.00),221(CGCACGCG,-,0.00) 507(CGGCACGT,-,0.00) 627(CGTCGGAA,+,0.00) -7(CAGTTTTG,-,0.00) 277(GGCGCGGC,-,0.00) 149(ACCGCGGCCC,-,0.00) 152(GCGGCCCGGGTC,+,0.00),280(GCGGCCTCGCTC,+,0.00) 561_WT_peak_1828 chr12 102270910 102271483 + 213 NA promoter-TSS (NM_018370) promoter-TSS (NM_018370) 91 NM_018370 55332 Hs.525634 NM_018370 HPRD:07743 DRAM1 DRAM DNA-damage regulated autophagy modulator 1 protein-coding 0.123909 0.728223 113(CCGGCCTCCGCC,+,0.00) 288(TGGCCCGGCAGC,+,0.00) -20(CCGGGAGGGAGG,-,0.00),338(CCTCCCTCCGGG,+,0.00) 301(TCGCCGCC,+,0.00) 348(GGGCTGGGCCTG,-,0.00) 99(CGTCCGCG,-,0.00),186(CGCGTCCG,+,0.00),400(TGTACGCG,-,0.00) 204(GCCGGGCG,+,0.00) 321(CCGCTCCTCGCG,-,0.00),336(CCCCTCCCTCCG,-,0.00) 137(CAAAAGCG,+,0.00) 285(CTCTGGCCCGGC,-,0.00) 370(CGCGGAGCCTCC,+,0.00) 226(GGGCCGCTTT,+,0.00) 367(CGTCGCGG,+,0.00) -154(CCCCCGCAGC,-,0.00),-93(GCTGCGAAGC,+,0.00),-49(GGTGCGAGGC,+,0.00),298(GCCTCGCCGC,-,0.00) 221(CTGCCGGGCCGC,-,0.00),263(CGGGCAGCCCGC,-,0.00),296(CAGCCTCGCCGC,-,0.00) 561_WT_peak_4311 chr2 135676405 135676807 + 213 NA promoter-TSS (NR_036549) promoter-TSS (NR_036549) 214 NM_001241 905 Hs.744115 NM_001241 HPRD:04839 CCNT2 CYCT2 cyclin T2 protein-coding 0.101990 0.660050 61(GTCGCCGGGCCT,-,0.00) -142(GGCGTCGG,-,0.00),28(TCGCCGCC,+,0.00),119(TCGGCGCC,+,0.00) -138(TCGGGCCG,+,0.00),-42(TCGTGCCG,+,0.00) -140(CGTCGGGC,+,0.00) -108(TTTACTCG,-,0.00),-56(CGGATAAA,+,0.00) -83(CGCCGAGCCGCC,+,0.00),118(CTCGGCGCCGCG,+,0.00),118(CTCGGCGCCGCG,-,0.00) 561_WT_peak_2722 chr16 21518328 21518822 + 212 NA Intergenic Intergenic -4973 NR_027155 100271836 Hs.552700 NR_027155 ENSG00000180747 SMG1P3 - SMG1 pseudogene 3 pseudo 0.032389 0.616162 279(TAGTGGCT,+,0.00) -127(GGGCTGGGGCAG,-,0.00),215(TGGCTGGGGCTC,-,0.00) -64(TTTACCCA,-,0.00) 154(GCGGAGCCAGCA,+,0.00) 561_WT_peak_220 chr1 45965745 45966174 + 212 NA promoter-TSS (NR_033298) promoter-TSS (NR_033298) 103 NM_015506 25974 Hs.13024 NM_015506 HPRD:18585 MMACHC cblC methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria protein-coding 0.055944 0.525581 13(GGAGTCGA,-,0.00),153(GGCTTCGA,-,0.00) 163(TTTACCCC,-,0.00) 97(TGGAGCCGAAAG,+,0.00) 561_WT_peak_6520 chr6 152492146 152492959 + 212 NA intron (NM_182961, intron 130 of 145) intron (NM_182961, intron 130 of 145) -209113 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA 0.012300 0.429975 157(TGCGTACG,+,0.00) 586(CTGTTTTG,-,0.00) 408(AAAACAGGAAGA,+,0.00) 561_WT_peak_1043 chr10 74056834 74057775 + 212 NA Intergenic MIRb|SINE|MIR 23627 NM_019058 54541 Hs.744875 NM_019058 HPRD:09662 DDIT4 Dig2|REDD-1|REDD1 DNA-damage-inducible transcript 4 protein-coding 0.062699 0.613588 628(TCCGCCTCCGCC,+,0.00) 147(CCTTCCGGGCCG,-,0.00) -70(CTCGGCCTCC,-,0.00) 683(AGCGGCCT,-,0.00) 429(CCTCCTTCCCGC,+,0.00),437(CCGCTCCCCCGG,+,0.00) 661(CAGCCGCAGCCC,+,0.00) 460(CGCGTGCG,+,0.00),462(CGTGCGCG,-,0.00) 738(CCGCCCGA,+,0.00),768(CCGACCCA,+,0.00) 669(GCCCGGCCCT,+,0.00) 703(CCCGCGGC,-,0.00) 133(TGGCACGA,-,0.00),398(CGGCACAA,-,0.00) -33(ACCGCGCC,+,0.00) 2(CCCTGGCCCAGG,-,0.00),747(GCGCGCCCAGCG,+,0.00) 668(AGCCCGGCCC,-,0.00),734(AGCCCCGCCC,-,0.00) 711(GCCCCCCAGC,-,0.00),719(GCTCCGCACC,-,0.00) 684(GCGGCCTGAGTG,+,0.00) 561_WT_peak_2346 chr14 94444721 94444989 + 212 NA Intergenic Intergenic -1779 NM_001202429 51676 Hs.510327 NM_016150 HPRD:05768 ASB2 ASB-2 ankyrin repeat and SOCS box containing 2 protein-coding 0.018657 0.412639 -92(TCGTGCCA,+,0.00) -5(GCTCCTCAGC,-,0.00) 561_WT_peak_4328 chr2 150443981 150444347 + 212 NA non-coding (NR_110240, exon 1 of 3) non-coding (NR_110240, exon 1 of 3) 166 NM_015702 27249 Hs.5324 NM_015702 HPRD:10781 MMADHC C2orf25|CL25022|cblD methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria protein-coding 0.071038 0.572207 62(AGAACCGGACTC,+,0.00) 93(GGCGGCGA,-,0.00),159(CGCGTCGA,-,0.00) 177(CGCACGCG,-,0.00) -37(CAATACCG,+,0.00),61(CAGAACCG,+,0.00) -11(CGGGCAAA,+,0.00) 561_WT_peak_3882 chr19 52551976 52552364 + 212 NA promoter-TSS (NM_014650) promoter-TSS (NM_014650) -97 NM_014650 9668 Hs.655934 NM_014650 HPRD:11716 ZNF432 - zinc finger protein 432 protein-coding 0.072165 0.580977 76(AGGCCTCT,+,0.00),101(AGACACCT,-,0.00),138(AGAGGCTT,-,0.00) -8(GGCGTCGC,-,0.00) -20(CGCGTCCG,+,0.00),-18(CGTCCGCG,-,0.00) 57(CGGGAGACGCGG,+,0.00) 172(GGGGTAAA,+,0.00) -2(GCCTCGCCGC,-,0.00) 561_WT_peak_1854 chr12 110939574 110940423 + 212 NA promoter-TSS (NM_016226) promoter-TSS (NM_016226) -7 NM_001286535 144715 Hs.97794 NM_152442 ENSG00000151164 RAD9B - RAD9 homolog B (S. pombe) protein-coding 0.065960 0.610588 32(TCGCCCTCGGCC,+,0.00),156(CCGCCCTCTTCC,+,0.00) 37(CTCGGCCTCC,-,0.00) 268(AAGCCGTT,+,0.00),269(AGCCGTTT,-,0.00),455(AGCGGCCT,-,0.00) 153(TCGCCGCC,+,0.00),360(GCCGTCGA,-,0.00) 78(GAGAGCCAGGCC,+,0.00) -101(GGGGCCGGGA,-,0.00) 509(CGTCCCTA,+,0.00) -130(TTTACCCC,-,0.00) 46(CCCACGGCTCCC,-,0.00) 566(CACGCCCTGGCC,+,0.00) 561_WT_peak_261 chr1 62190546 62190957 + 212 NA exon (NM_032027, exon 1 of 7) exon (NM_032027, exon 1 of 7) 344 NM_032027 83941 Hs.656790 NM_032027 HPRD:16540 TM2D1 BBP TM2 domain containing 1 protein-coding 0.075426 0.633495 116(TCCGCCTCCGCC,+,0.00) -55(AAGCGACT,+,0.00) -47(CCTCGCCCCCGG,+,0.00) -42(CCCCCGGC,-,0.00) -115(GCCTCCATGGGG,+,0.00) 65(CGGCCAGGCGGC,-,0.00) 561_WT_peak_4326 chr2 149402042 149402704 + 211 NA promoter-TSS (NM_015630) promoter-TSS (NM_015630) -187 NM_015630 26122 Hs.23270 NM_015630 HPRD:13274 EPC2 EPC-LIKE enhancer of polycomb homolog 2 (Drosophila) protein-coding 0.129909 0.746606 254(GGAGGAGGAGGA,-,0.00) -32(CGGGCCGGCAGC,+,0.00) 156(GGCGGGCGAG,+,0.00),186(GGCGGCCGCG,+,0.00) 423(AAGCCGCT,+,0.00) -71(CCCTCTCCCCGG,+,0.00),52(GCGCGTTCCCGC,+,0.00),321(CCCCCCTCCCCG,+,0.00),322(CCCCCTCCCCGC,+,0.00),330(CCGCCCGCCCCG,+,0.00) 101(TCGCCGCC,+,0.00),412(TGGACGCC,+,0.00) -57(CGGACCGA,+,0.00),153(TCGGGCGG,-,0.00),213(TCGGGCGG,-,0.00) -79(CCCCCGCC,-,0.00),190(GCCGCGGG,+,0.00),240(GCCGGGGG,+,0.00) 324(CCCTCCCCGCCC,+,0.00) 8(GGGAGGGGAAGG,+,0.00),18(GGGAGAGGAAGG,+,0.00) -84(CGCCGCCCCCGC,-,0.00),269(GGCCGGCCGCGC,-,0.00),331(CGCCCGCCCCGC,-,0.00),340(CGCCGCCGCCGC,-,0.00) -86(GGCGCCGCCC,-,0.00) 60(CCGCGACG,-,0.00),418(CCGCCAAG,-,0.00) 132(GGCCATGGCGCA,-,0.00),417(GCCGCCAAGCCG,+,0.00) 336(GCCCCGCCGC,-,0.00) -33(GCGGGCCGGCAG,+,0.00),83(GCGGGCTGCCGG,+,0.00),266(GCGGGCCGGCCG,+,0.00),418(CCGCCAAGCCGC,-,0.00) 561_WT_peak_7412 chr9 123605146 123605603 + 211 NA promoter-TSS (NM_005047) promoter-TSS (NM_005047) 54 NR_024408 253039 Hs.594170 NR_024408 ENSG00000226752 PSMD5-AS1 - PSMD5 antisense RNA 1 (head to head) ncRNA 0.080963 0.650655 67(AGGTCGCT,+,0.00) 115(CGCGTAGG,+,0.00) -164(CCTCGCTA,+,0.00) 212(CAAAACCA,+,0.00) -104(GGCTGGCCCAGC,-,0.00),-103(GCTGGCCCAGCG,+,0.00) 148(AGCGGAGCGGCG,+,0.00) -80(GGGGCGCTTT,+,0.00) 114(CCGCGTAG,-,0.00),224(CTAGGCGG,+,0.00) 254(GGCCACCGCGGC,-,0.00) -16(GCTGCCAAGC,+,0.00) 561_WT_peak_1786 chr12 89556574 89556863 + 211 NA Intergenic Intergenic -143249 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LOC728084 - uncharacterized LOC728084 ncRNA 0.000000 0.417241 -71(GGGTTTTG,-,0.00) -27(GTTTCCTTTTTC,-,0.00) -148(GGGCCTATTT,+,0.00) 561_WT_peak_2537 chr15 70051374 70051755 + 211 NA Intergenic Intergenic -76009 NR_026764 414926 Hs.569502 NR_026764 ENSG00000259703 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA 0.010499 0.518325 124(GCCTGGCCCCAC,-,0.00) 561_WT_peak_7138 chr8 125486731 125487763 + 211 NA promoter-TSS (NR_108048) promoter-TSS (NR_108048) 239 NM_007218 11236 Hs.744151 NM_007218 RNF139 HRCA1|RCA1|TRC8 ring finger protein 139 protein-coding 0.093023 0.664085 -34(GGAGGTGGGCGG,-,0.00) 97(GCCTCCGGGCCT,-,0.00),575(CTACCCGGATTC,+,0.00) 274(CTCCGCCGCC,-,0.00),458(GGCGGCCGTG,+,0.00) 594(AGCCGGTT,-,0.00) 252(CCGCCCTCTCGG,+,0.00),377(CCCCGCCCCCGG,+,0.00),692(CCGGGGAGCGGG,-,0.00) 556(TCGACGCC,+,0.00) 701(GGGCAGGCGCGC,-,0.00) 427(CCCACCGA,+,0.00) 164(GGCGGGGG,+,0.00),376(CCCCCGCC,-,0.00),382(CCCCCGGC,-,0.00) -58(TGGCACGA,-,0.00) 15(CGTCTCTA,+,0.00),836(TAGCGAGG,-,0.00) 255(CCCTCTCGGCCA,+,0.00),779(GGGTTGGGAGGG,-,0.00) 591(CAAAGCCG,+,0.00),597(CGGTTCTG,-,0.00) 510(TGGGCGGC,-,0.00) 244(CGCCGCCGCCGC,-,0.00),268(CGCTGCCTCCGC,-,0.00) 152(GGTGGCTCCGCG,-,0.00),390(CGCGGCCCCGGG,-,0.00) 355(GGGCGGAGTT,+,0.00),511(GGGCGGCGCT,+,0.00) -149(CCGACTCG,-,0.00),680(CCGAGACG,-,0.00) 262(GGCCATCGCTGC,-,0.00),452(GCTCATGGCGGC,-,0.00) 310(GCGGCGGGGC,+,0.00),471(CCCCCGCAGC,-,0.00) 310(GCGGCGGGGCTG,+,0.00) 561_WT_peak_1528 chr11 129872182 129872714 + 211 NA promoter-TSS (NR_024233) promoter-TSS (NR_024233) -71 NR_024233 440072 Hs.630600 NM_001007543 LINC00167 C11orf37|NCRNA00167 long intergenic non-protein coding RNA 167 ncRNA 0.082707 0.671670 -91(GGCGACGA,-,0.00) -76(AGGCCGGCGCTG,-,0.00) 57(TCGGGCGG,-,0.00),122(GCGGTCGG,-,0.00),126(TCGGTTGG,-,0.00) 347(CCCCCGCC,-,0.00) -158(GCGCGGCCGGCG,+,0.00),-149(GCGGAGCGTGCG,+,0.00),-61(GCGGCGCCAGGA,+,0.00) 113(CCCGGGTCCGCG,-,0.00) -64(AACGCGGCGC,-,0.00) -105(GCGGCGAAGG,+,0.00) 561_WT_peak_3604 chr19 8386041 8386534 + 211 NA promoter-TSS (NM_001031) promoter-TSS (NM_001031) -7 NM_005001 4701 Hs.333427 NM_005001 HPRD:11885 NDUFA7 B14.5a NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa protein-coding 0.091278 0.680162 42(CGTCCGCG,-,0.00) -162(GGGCTGAAGGGG,-,0.00),-32(CCCTGTCCGCCC,+,0.00) -22(CCCGCGCA,+,0.00),129(TGGGCGGT,-,0.00),196(GCCGCGCC,+,0.00) 302(GGGCCGGGTC,+,0.00) -1(GTTCCGCAGC,-,0.00) 183(CCGCCAGACCGC,-,0.00) 561_WT_peak_2577 chr15 83208774 83209491 + 210 NA promoter-TSS (NR_111943).2 promoter-TSS (NR_111943).2 76 NR_111943 6218 Hs.433427 NM_001021 HPRD:01600 RPS17 DBA4|RPS17L|RPS17L1|RPS17L2|S17 ribosomal protein S17 protein-coding 0.096234 0.662953 207(GGAGGATGGCGG,-,0.00) 309(AAGCCGCT,+,0.00),310(AGCCGCTT,-,0.00) 138(GCGCCTTCCCGG,+,0.00) 4(GGCGCCGA,-,0.00),217(GGCCTCGA,-,0.00) 10(GAGCCCCGGCCG,+,0.00) -65(CGAACGCG,-,0.00) 144(TCCCGGCCCA,+,0.00) 76(GCCGGGCG,+,0.00),319(CGCCCGGC,-,0.00) -76(CGGTTTTG,-,0.00) 64(CGGCTAAA,+,0.00) 446(CTTTCCGCTCCC,-,0.00) 266(GAAACAGGAAGC,+,0.00) 36(CGCCGGCTGCGC,-,0.00),381(GCGGGGGCGGCG,+,0.00) -61(CGCGGCCCTGCG,-,0.00),6(CGCCGAGCCCCG,+,0.00) -91(GGGCCGCCTT,+,0.00),-63(AACGCGGCCC,-,0.00) 343(CTACTCGG,+,0.00) -96(GACCCGGGCCGC,-,0.00) 561_WT_peak_1628 chr12 25204720 25205584 + 210 NA promoter-TSS (NM_006152) promoter-TSS (NM_006152) -29 NM_001204127 4033 Hs.124922 NM_006152 HPRD:03593 LRMP JAW1 lymphoid-restricted membrane protein protein-coding 0.008102 0.426590 536(AGCGACTA,-,0.00) 535(TAGCGACT,-,0.00) 245(CGGTTTGG,-,0.00) -122(TTTACCCC,-,0.00),650(TTTAACCG,-,0.00) 561_WT_peak_3253 chr17 53802823 53803052 + 210 NA intron (NM_001099640, intron 2 of 3) intron (NM_001099640, intron 2 of 3) -2712 NM_018286 55273 Hs.173233 NM_018286 HPRD:07719 TMEM100 - transmembrane protein 100 protein-coding 0.008734 0.456522 -56(GGGACCGTAAAC,+,0.00),-13(GGGACCGGAGAC,+,0.00) 561_WT_peak_3092 chr17 27046820 27047503 + 210 NA promoter-TSS (NR_000013) promoter-TSS (NR_000013) 161 NM_000984 6147 Hs.419463 NM_000984 RPL23A L23A|MDA20 ribosomal protein L23a protein-coding 0.062958 0.562865 42(GGCGCCGA,-,0.00) 479(CGTAGGAC,+,0.00) 309(CGGTTCTG,-,0.00),450(TGGTTTTG,-,0.00) 94(TTTACCGG,-,0.00),425(ATTACCCG,-,0.00) 107(GCCGCGCC,+,0.00) 212(GGGCCGCGTG,+,0.00),235(GGGCTGAGTT,+,0.00) 439(TCTCCGCAGC,-,0.00) 561_WT_peak_394 chr1 114471838 114472211 + 209 NA promoter-TSS (NM_198268) promoter-TSS (NM_198268) 28 NM_152696 204851 Hs.532363 NM_152696 HPRD:06418 HIPK1 Myak|Nbak2 homeodomain interacting protein kinase 1 protein-coding 0.067024 0.609626 186(CCGGCGAGGCGG,-,0.00) 75(TCGAGGCC,+,0.00) 81(CCCACCGA,+,0.00) -125(TCGTCCCG,+,0.00) 173(CGGGTGAA,+,0.00) 25(TCCAGGCCCCGC,-,0.00),194(GCGGGGCCGGCC,+,0.00) 190(CGAGGCGG,+,0.00) 561_WT_peak_6694 chr7 66460166 66460545 + 209 NA exon (NM_016038, exon 1 of 5) exon (NM_016038, exon 1 of 5) 233 NM_016038 51119 Hs.110445 NM_016038 HPRD:07393 SBDS SDS|SWDS Shwachman-Bodian-Diamond syndrome protein-coding 0.108179 0.671053 158(ACGACCGA,+,0.00) 5(CGGCACGC,-,0.00) 195(TGCGCGGC,-,0.00) -52(CGCCGCTCCGCC,-,0.00),197(CGCGGCGCCGCG,+,0.00),197(CGCGGCGCCGCG,-,0.00) -111(CCGCCTCG,-,0.00) -1(GCTTCCCGGC,-,0.00) -119(GAGACAGGCCGC,-,0.00) 561_WT_peak_1544 chr12 861080 861926 + 209 NA promoter-TSS (NM_014823) promoter-TSS (NM_014823) -586 NM_001184985 65125 Hs.744906 NM_014823 HPRD:05570 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding 0.053191 0.559622 -94(TTCCCCTCCTCC,+,0.00) 442(GGGGTGGGGCTG,-,0.00) 108(CCCCCGCC,-,0.00),462(GGCGGGGG,+,0.00) -35(CCCTCACAGCCC,+,0.00) 543(CGCGGCTCCTCT,-,0.00) 561_WT_peak_751 chr1 225965384 225965944 + 209 NA exon (NM_001130440, exon 1 of 4) exon (NM_001130440, exon 1 of 4) 149 NM_001130440 6726 Hs.511425 NM_003133 HPRD:02830 SRP9 ALURBP signal recognition particle 9kDa protein-coding 0.060714 0.620321 194(GGGCCCCAGCCC,+,0.00) 10(TCGGTTGG,-,0.00) 316(CCCCTTCTTCCC,-,0.00) 373(TCATCTCAGCCC,+,0.00) -112(GGCTCCGCCC,-,0.00),44(GGGCCGGGTT,+,0.00),225(CACTCGGCCC,-,0.00) 135(CCGAGAAG,-,0.00) 561_WT_peak_3322 chr17 66243479 66243813 + 209 NA promoter-TSS (NM_001033571) promoter-TSS (NM_001033571) -499 NM_001033570 51321 Hs.293560 NM_016627 HPRD:14237 AMZ2 - archaelysin family metallopeptidase 2 protein-coding 0.083832 0.611940 57(CCCGCGGC,-,0.00) 13(CGCCACGA,-,0.00) -62(TGCCGGCCCCGC,-,0.00) 561_WT_peak_6872 chr7 140624178 140624558 + 209 NA exon (NM_004333, exon 1 of 18) exon (NM_004333, exon 1 of 18) 196 NM_004333 673 Hs.550061 NM_004333 HPRD:01264 BRAF B-RAF1|BRAF1|NS7|RAFB1 B-Raf proto-oncogene, serine/threonine kinase protein-coding 0.115789 0.724409 -19(GAGCCCGGAGTC,+,0.00) -83(AGGTGGCT,+,0.00) 201(GCGGGGAGGGGG,-,0.00) 197(TCGGGCGG,-,0.00) -112(ACCTCCCAGCCC,+,0.00),199(GGGCGGGGAGGG,-,0.00) 61(GCGGCGCCGGCG,+,0.00),65(CGCCGGCGCCGG,-,0.00),67(CCGGCGCCGGCG,+,0.00),71(CGCCGGCGCCGG,-,0.00),112(GCCTGGCCCGGC,-,0.00),176(CCGGGGCCCGAG,+,0.00) 118(CCCGGCTCCGCG,-,0.00) -89(CCGAGAAG,-,0.00) 41(GGTCCGCAGC,-,0.00) 561_WT_peak_59 chr1 11333286 11333607 + 209 NA 5' UTR (NM_013319, exon 1 of 2) 5' UTR (NM_013319, exon 1 of 2) 191 NM_013319 29914 Hs.522933 NM_013319 HPRD:15487 UBIAD1 SCCD|TERE1 UbiA prenyltransferase domain containing 1 protein-coding 0.084112 0.677019 -96(GGGGCCGGAGAC,+,0.00) -135(GGCGGCCGCG,+,0.00) -159(TGGCGGCT,+,0.00) 72(CCTCCTTCCCGG,+,0.00) 28(CGGAACCGAAGG,+,0.00) -129(CGCGGCTCAGCC,-,0.00) -57(GGGCGGCGCC,+,0.00) 135(TTCCATGGCGGC,-,0.00) 561_WT_peak_4060 chr2 47403183 47403624 + 209 NA intron (NM_001743, intron 1 of 5) CpG 337 NM_001743 805 Hs.468442 NM_001743 HPRD:00242 CALM2 CAMII|PHKD|PHKD2 calmodulin 2 (phosphorylase kinase, delta) protein-coding 0.058957 0.615385 -43(CCATCCTCCTCC,+,0.00) -127(CCGACAGA,+,0.00) 92(TCCCTGGCCT,+,0.00) 75(CACAACCG,+,0.00) 245(GCTACCGGTTTC,-,0.00) 256(CCGAGACG,-,0.00) -32(CAGCCAAGCCCC,-,0.00) 561_WT_peak_7339 chr9 93893865 93894217 + 208 NA Intergenic Intergenic -56627 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA 0.017045 0.405099 53(AGAGGCCT,-,0.00) 561_WT_peak_592 chr1 161500072 161500340 + 208 NA Intergenic tRNA-Leu-CTG|tRNA|tRNA 6170 NM_002155 3310 Hs.654614 NM_002155 HPRD:00775 HSPA6 - heat shock 70kDa protein 6 (HSP70B') protein-coding 0.033582 0.434944 561_WT_peak_173 chr1 35965277 35965704 + 208 NA intron (NM_024874, intron 3 of 20) intron (NM_024874, intron 3 of 20) 57547 NM_024874 79932 Hs.456507 NM_024874 HPRD:11164 KIAA0319L - KIAA0319-like protein-coding 0.004684 0.406542 561_WT_peak_3131 chr17 34136062 34136766 + 208 NA promoter-TSS (NM_139215) promoter-TSS (NM_139215) -45 NM_003487 8148 Hs.402752 NM_003487 HPRD:09031 TAF15 Npl3|RBP56|TAF2N|TAFII68 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa protein-coding 0.075284 0.611348 447(GCCTCCGGCCCT,-,0.00) -137(AGCCGCCA,-,0.00) 175(TCCTGCCG,+,0.00) 382(CAGCGACG,-,0.00) 236(CCGCCTCAGCCC,+,0.00) 248(GCCGCGCC,+,0.00),277(GCCGCGCC,+,0.00) 486(CGCTGCCGCCGC,-,0.00) 493(GCCGCCATGTTG,+,0.00) 282(GCCGCCTGGCTT,+,0.00) 561_WT_peak_6246 chr6 28909215 28909537 + 208 NA Intergenic Intergenic -2185 NR_103538 729583 Hs.453549 NR_103538 C6orf100 dJ25J6.5 chromosome 6 open reading frame 100 ncRNA 0.024845 0.421053 561_WT_peak_2532 chr15 68132126 68132632 + 208 NA promoter-TSS (NR_125730).5 promoter-TSS (NR_125730).5 4 NR_125730 103625684 NR_125730 RNU6-2 U6-2 RNA, U6 small nuclear 2 snRNA 0.035573 0.357002 331(AAATAGGCCC,-,0.00) 561_WT_peak_4566 chr20 13765479 13765752 + 207 NA promoter-TSS (NM_001276380) promoter-TSS (NM_001276380) -36 NM_001276380 51575 Hs.369284 NM_016649 HPRD:10732 ESF1 ABTAP|C20orf6|bA526K24.1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) protein-coding 0.087912 0.605839 561_WT_peak_6409 chr6 99872825 99873295 + 207 NA intron (NM_032870, intron 1 of 11) CpG 147 NM_015491 25957 Hs.520287 NM_015491 HPRD:10787 PNISR C6orf111|HSPC306|SFRS18|SRrp130|bA98I9.2 PNN-interacting serine/arginine-rich protein protein-coding 0.065957 0.494692 127(TCGCCGCC,+,0.00) -1(AGCGTACG,+,0.00),1(CGTACGCA,-,0.00) 561_WT_peak_3203 chr17 43224527 43225434 + 207 NA 5' UTR (NM_006460, exon 1 of 1) 5' UTR (NM_006460, exon 1 of 1) 296 NM_006460 10614 Hs.586945 NM_006460 HPRD:09544 HEXIM1 CLP1|EDG1|HIS1|MAQ1 hexamethylene bis-acetamide inducible 1 protein-coding 0.062845 0.567181 324(AGGCTGGGGCTG,-,0.00),330(GGGCTGGGACTC,-,0.00) 115(TCGGTCGG,-,0.00) 215(CCCCCGCC,-,0.00),225(CCCCCGGC,-,0.00),301(GGCGGGGG,+,0.00) 438(CGGCGCTA,+,0.00) -123(CCCCCCCAGCCC,+,0.00) 629(GGCCGACG,-,0.00) 726(CCTTCGGAACCC,-,0.00) 226(CCCCGGCCCCGG,-,0.00) -130(GAATCGGCCC,-,0.00),136(AAATCGGCCC,-,0.00),245(ATCTCGGCCC,-,0.00),306(GGGCGGCTTT,+,0.00) 561_WT_peak_2865 chr16 66637481 66637798 + 207 NA promoter-TSS (NM_144601) promoter-TSS (NM_144601) -296 NR_037613 123920 Hs.298198 NM_144601 HPRD:16259 CMTM3 BNAS2|CKLFSF3 CKLF-like MARVEL transmembrane domain containing 3 protein-coding 0.018927 0.468553 -28(CCCCCGGC,-,0.00) -53(TGCGCAGT,-,0.00) 561_WT_peak_3099 chr17 27621097 27621621 + 207 NA promoter-TSS (NM_020772) promoter-TSS (NM_020772) -193 NM_020772 57532 Hs.462598 NM_020772 HPRD:11764 NUFIP2 182-FIP|82-FIP|FIP-82 nuclear fragile X mental retardation protein interacting protein 2 protein-coding 0.053435 0.556190 -66(CCGAGCGA,+,0.00) 78(AGGGCCGGGC,-,0.00) 187(TCGTGTCG,+,0.00) 311(CGGGTAAC,+,0.00) -9(CGCAAGCCCCGC,-,0.00) -5(AGCCCCGCCC,-,0.00) 29(CCTTCGCCGC,-,0.00) 561_WT_peak_2063 chr13 52733663 52734041 + 207 NA promoter-TSS (NM_152720) promoter-TSS (NM_152720) 144 NM_002498 4752 Hs.409989 NM_002498 HPRD:04954 NEK3 HSPK36 NIMA-related kinase 3 protein-coding 0.066138 0.580475 -15(GTAGCCGGGCCT,-,0.00) -51(AGCCGCCT,-,0.00) -149(CCGCTTCCCCGG,+,0.00) -62(CGGGTGAA,+,0.00) -96(GCGGGGCGGGCC,+,0.00),-91(GCGGGCCCGGCG,+,0.00) 561_WT_peak_7387 chr9 111882030 111882528 + 207 NA promoter-TSS (NM_032012) promoter-TSS (NM_032012) -54 NM_032012 23731 Hs.308074 NM_032012 HPRD:09866 TMEM245 C9orf5|CG-2|CG2 transmembrane protein 245 protein-coding 0.104418 0.649299 -132(CAGCGCCAGCGC,+,0.00),-63(CGGCGCCGGCCC,+,0.00) -83(CCGACCGC,+,0.00) -67(CCCGCGGC,-,0.00) -87(CGGCCCGA,-,0.00) -10(CGTCGGCC,+,0.00) -133(GCAGCGCCAGCG,+,0.00),-74(CGCGGGACCCGC,-,0.00),-73(GCGGGACCCGCG,+,0.00),-64(GCGGCGCCGGCC,+,0.00),-60(CGCCGGCCCGGG,-,0.00) -91(CACTCGGCCC,-,0.00) -45(GCTCCGCAGG,-,0.00) 561_WT_peak_296 chr1 78443999 78445352 + 206 NA exon (NM_003902, exon 1 of 20) exon (NM_003902, exon 1 of 20) 102 NM_003902 8880 Hs.567380 NM_003902 HPRD:10349 FUBP1 FBP|FUBP far upstream element (FUSE) binding protein 1 protein-coding 0.065041 0.533235 -60(AAGCGGTT,+,0.00),338(AGCGGCCT,-,0.00),558(AGAGACTT,-,0.00) 1044(CCCGGAGGGCGC,-,0.00) 603(GCCGTCGA,-,0.00) 637(TCGTGCCG,+,0.00) 438(CGTCGTTA,+,0.00),741(CGTCGCGA,+,0.00) 712(GGGCTGAGAAAG,-,0.00) -57(CGGTTTTA,-,0.00),229(CAAAACTG,+,0.00) 1070(CCGAGACG,-,0.00) 561_WT_peak_276 chr1 67519409 67520063 + 206 NA 5' UTR (NM_015139, exon 1 of 12) 5' UTR (NM_015139, exon 1 of 12) 344 NM_015139 23169 Hs.213642 NM_015139 HPRD:15372 SLC35D1 UGTREL7 solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1 protein-coding 0.097859 0.687023 -105(CTGGGCCGCC,-,0.00),256(CTTGGCCGCC,-,0.00) 159(TAGCGGCT,+,0.00) -118(CCTCCTCCGCGG,+,0.00) 24(CCGACGCC,+,0.00),237(TCGCCGCC,+,0.00),245(TCGACTCC,+,0.00) 473(GCCGGGCG,+,0.00) 22(GGCCGACG,-,0.00) 86(TTAACCCG,-,0.00) -142(GCCGCGCC,+,0.00),230(TGCGCGCT,-,0.00),355(GCCGCGCC,+,0.00) -149(AGCCGGCGCCGC,-,0.00),-138(CGCCGCCGCCGC,-,0.00),-135(CGCCGCCGCCGC,-,0.00),266(GCCTGTCCCCGC,-,0.00),337(GCGGGGTCAGAG,+,0.00) 353(GGGCCGCGCC,+,0.00) -94(CCGCCTCG,-,0.00),240(CCGCCTCG,-,0.00),425(CGAGGCGG,+,0.00) -95(GCCGCCTCGGCC,+,0.00),116(TCCGCCATGGCT,+,0.00),118(CGCCATGGCTGC,-,0.00) -139(GCGCCGCCGC,-,0.00),148(GCGGCGGGGC,+,0.00),255(GCTTGGCCGC,-,0.00) 140(GTGGCCTGGCGG,+,0.00) 561_WT_peak_3725 chr19 35224551 35225411 + 206 NA promoter-TSS (NM_001145665) promoter-TSS (NM_001145665) -499 NM_001029997 339318 Hs.720472 NM_001029997 HPRD:18783 ZNF181 HHZ181 zinc finger protein 181 protein-coding 0.074419 0.613240 567(GACTCCGGCCAG,-,0.00) 398(TCGATCGG,-,0.00) 282(CCCGCGGC,-,0.00) 469(CGGGACGA,-,0.00) 524(CAGCGACG,-,0.00) 82(CGGTTTTC,-,0.00),248(CGGTTTAG,-,0.00) 278(TTTGCCCG,-,0.00) 375(TGCGCGGA,-,0.00),409(TGGGCGGC,-,0.00) 587(CCGGGGGCGGCG,+,0.00) 527(CGACGCGG,+,0.00) 596(GCGGCGGGGC,+,0.00) 561_WT_peak_6509 chr6 149469495 149469899 + 206 NA Intergenic Intergenic -70062 NM_001292035 23118 Hs.269775 NM_015093 HPRD:05483 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding 0.012376 0.387654 561_WT_peak_1205 chr11 9482499 9483155 + 206 NA promoter-TSS (NR_036539) promoter-TSS (NR_036539) 315 NM_001282656 7702 Hs.523471 NM_003442 HPRD:04578 ZNF143 SBF|STAF|pHZ-1 zinc finger protein 143 protein-coding 0.096037 0.672755 69(TCAGCCTCCGCC,+,0.00) 376(GACGCCGGGCCC,-,0.00) 152(CGCGGCCGCC,-,0.00),168(GGCGGCGGAG,+,0.00) 257(AGGGGAGGGA,-,0.00) 150(CCCGCGGC,-,0.00) 125(GGGCAGAAGCGG,+,0.00) 114(TAGCGGCG,-,0.00) -76(GGTCGGAC,+,0.00),-75(GTCGGACG,-,0.00) -20(TTTACCCA,-,0.00) 52(GCTCCGGCTCCC,-,0.00) 324(TCCGCGCA,+,0.00) -122(GCGGGGCCTGGG,+,0.00),341(CCCAGGCGCCGC,-,0.00),417(CCGGGGACAGGG,+,0.00) 23(CGCGGCGGCGCG,+,0.00),23(CGCGGCGGCGCG,-,0.00) 301(TGGCCGCGTT,+,0.00) 165(CTAGGCGG,+,0.00),251(CCGCCAAG,-,0.00) 24(GCGGCGGCGC,+,0.00),169(GCGGCGGAGC,+,0.00) -120(GGGGCCTGGGGG,+,0.00),2(CCGCCTGGCCGC,-,0.00) 561_WT_peak_3398 chr17 80415851 80416462 + 205 NA promoter-TSS (NM_031968) promoter-TSS (NM_031968) 96 NM_001038618 26502 Hs.256526 NM_012336 HPRD:05637 NARF IOP2 nuclear prelamin A recognition factor protein-coding 0.101473 0.645425 -7(GCTTCCGGGTCC,-,0.00) 89(GGCGGACGAG,+,0.00),298(CTTGGCCGCC,-,0.00) 369(CGTACGTG,-,0.00) 221(CGGACCGA,+,0.00) 426(GCCCGCCCCT,+,0.00) 106(CCCCCGGC,-,0.00),359(CCCCCGGC,-,0.00) 428(CCGCCCCTTCCC,-,0.00) 88(CGGCGGAC,+,0.00),146(GTCCAACG,-,0.00) 28(GCCGCGCA,+,0.00),36(TGCGCGCT,-,0.00) 23(GGCAGGCCGCGC,-,0.00),188(GCGGGCCCAGGG,+,0.00),304(CGCCGCCGCCGC,-,0.00),307(CGCCGCCGCCGC,-,0.00) 80(GGCAATGGCGGC,-,0.00) 297(GCTTGGCCGC,-,0.00) 21(CAGGCAGGCCGC,-,0.00),169(GAGCCCGGCCGC,-,0.00),418(GGGGCCTGGCCC,+,0.00) 561_WT_peak_1308 chr11 61129413 61129854 + 205 NA non-coding (NR_028473, exon 1 of 6) non-coding (NR_028473, exon 1 of 6) 122 NM_001161454 220002 Hs.22546 NM_153611 HPRD:11316 CYB561A3 CYBASC3|LCYTB cytochrome b561 family, member A3 protein-coding 0.083900 0.658371 120(GGAGCAGGCCGG,-,0.00),227(CCCGCCTCCTCC,+,0.00) 97(TAGCGGCG,-,0.00) -18(GCCTCTCATCCC,+,0.00) -60(GTCCGAAG,-,0.00) 66(TGCGCAGT,-,0.00) 152(CAACATGGCGGC,-,0.00) -37(GCTGCGATGC,+,0.00),99(GCGGCGACGC,+,0.00) 159(GCGGCCAGACTG,+,0.00) 561_WT_peak_2398 chr14 107119894 107120403 + 205 NA Intergenic Intergenic 181703 NR_027457 338005 Hs.322826 NR_027457 ENSG00000187156 LINC00221 C14orf98|NCRNA00221 long intergenic non-protein coding RNA 221 ncRNA 0.037328 0.617647 299(CGGGTTTG,-,0.00) 561_WT_peak_3867 chr19 50529063 50529481 + 205 NA promoter-TSS (NM_016440) promoter-TSS (NM_016440) 60 NM_001006656 25888 Hs.440553 NM_015428 HPRD:11721 ZNF473 HZFP100|ZN473 zinc finger protein 473 protein-coding 0.071770 0.589499 57(AAGTCGCT,+,0.00) -69(CTGAAGAAGCAG,+,0.00) -30(CCCGCACAGCCC,+,0.00) 66(CGAGGAGGCGCG,+,0.00) 561_WT_peak_171 chr1 35658505 35658796 + 205 NA promoter-TSS (NM_005066) promoter-TSS (NM_005066) 93 NM_005066 6421 Hs.355934 NM_005066 HPRD:07284 SFPQ POMP100|PPP1R140|PSF splicing factor proline/glutamine-rich protein-coding 0.109966 0.660959 -125(GGCGGCGGAG,+,0.00),-94(CGCGGCCGCC,-,0.00),-4(GGCGGTCGAG,+,0.00) -78(TCCACGCC,+,0.00) -129(GCCGGGCG,+,0.00) -49(CGCCACGA,-,0.00) 7(CAAAAGCG,+,0.00) -155(GGGCCGCGAT,+,0.00) -50(CCGCCACG,-,0.00) -135(GCCCATGCCGGG,-,0.00),-99(GCCGCCGCGGCC,+,0.00) 561_WT_peak_3899 chr19 56110565 56110996 + 205 NA promoter-TSS (NM_153219) promoter-TSS (NM_153219) 113 NM_032836 84922 Hs.515617 NM_032836 HPRD:07870 FIZ1 ZNF798 FLT3-interacting zinc finger 1 protein-coding 0.071926 0.708333 -156(CCCGCCTCCTCC,+,0.00),250(CCGCCCTTCTCC,+,0.00) 64(CCCGGGAGGCCG,-,0.00),65(CCGGGAGGCCGG,-,0.00) 122(GGCGCCGA,-,0.00) 27(CTCGTACG,+,0.00) 82(TCCGTCGG,-,0.00) 247(TCCCCGCCCT,+,0.00) 198(CCCCCGCC,-,0.00) 81(GTCCGTCG,-,0.00) -5(GGCAGGCCCCGG,-,0.00),3(CCGGGGCCAGGC,+,0.00),141(GCGGGGGCAGCG,+,0.00) -7(CGGGCAGGCCCC,-,0.00) 561_WT_peak_1881 chr12 120730412 120731153 + 205 NA Intergenic Intergenic -9342 NM_012240 23409 Hs.50861 NM_012240 HPRD:06837 SIRT4 SIR2L4 sirtuin 4 protein-coding 0.037787 0.451482 205(AGACACTT,-,0.00),291(AAGCCTCT,+,0.00) -119(CAACACCG,+,0.00),87(CAACACCG,+,0.00),261(CAAAACCA,+,0.00) 167(CAGGTAAA,+,0.00) 504(GCTTCCTATTTC,-,0.00) 452(ACTGCGCA,+,0.00) -118(AACACCGCCC,-,0.00),88(AACACCGCCC,-,0.00) 561_WT_peak_4918 chr22 39715325 39715611 + 205 NA promoter-TSS (NR_002439) promoter-TSS (NR_002439) 202 NM_001033853 6122 Hs.119598 NM_000967 HPRD:16042 RPL3 ASC-1|L3|TARBP-B ribosomal protein L3 protein-coding 0.087413 0.616725 -57(AAGCCTCT,+,0.00) 39(GGCGGCGA,-,0.00),68(CCGACGCC,+,0.00) 14(CCCCCGGC,-,0.00) 63(CCGTGCCG,+,0.00) 49(CGTCGCGG,+,0.00) 40(GCGGCGATGC,+,0.00) 561_WT_peak_5063 chr3 39448246 39448604 + 205 NA promoter-TSS (NM_001012321) promoter-TSS (NM_001012321) 221 NM_002295 3921 Hs.449909 NM_002295 HPRD:01038 RPSA 37LRP|67LR|ICAS|LAMBR|LAMR1|LBP|LBP/p40|LRP|LRP/LR|NEM/1CHD4|SA|lamR|p40 ribosomal protein SA protein-coding 0.075419 0.649025 -39(CGCCCGGC,-,0.00),91(GCCGCGGG,+,0.00) -138(GTCCCTGGCGCC,-,0.00) 561_WT_peak_5665 chr5 1792928 1793216 + 205 NA Intergenic MER58A|DNA|hAT-Charlie 6884 NM_032479 64979 Hs.719465 NM_032479 HPRD:14756 MRPL36 BRIP1|L36mt|MRP-L36|PRPL36|RPMJ mitochondrial ribosomal protein L36 protein-coding 0.013889 0.498270 -41(CAAAACCT,+,0.00) 93(CCAGCCATGGAC,+,0.00) 561_WT_peak_5361 chr3 189042464 189042943 + 204 NA Intergenic Intergenic -84320 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA 0.006263 0.439583 184(AGGCCTCT,+,0.00) 64(TAGGGACG,-,0.00) 561_WT_peak_69 chr1 15575707 15575938 + 204 NA intron (NM_052929, intron 1 of 30) intron (NM_052929, intron 1 of 30) 2054 NM_052929 114827 Hs.659997 NM_052929 ENSG00000142621 FHAD1 - forkhead-associated (FHA) phosphopeptide binding domain 1 protein-coding 0.017316 0.452586 561_WT_peak_7491 chrX 1324748 1325067 + 204 NA intron (NM_001012288, intron 2 of 4) intron (NM_001012288, intron 2 of 4) 6709 NM_022148 64109 Hs.287729 NM_022148 HPRD:02288 CRLF2 CRL2|CRLF2Y|TSLPR cytokine receptor-like factor 2 protein-coding 0.040752 0.403125 7(AGCGACTA,-,0.00) 109(ATCCGACG,-,0.00) 561_WT_peak_4586 chr20 24975567 24975820 + 204 NA Intergenic MER20|DNA|hAT-Charlie -2268 NM_020531 57136 Hs.472330 NM_020531 HPRD:09840 APMAP BSCv|C20orf3 adipocyte plasma membrane associated protein protein-coding 0.019763 0.551181 -147(GGCGGAGGGGGG,-,0.00) -12(CAAAACAG,+,0.00),28(CAAAACCC,+,0.00) 561_WT_peak_4332 chr2 153573595 153573907 + 204 NA promoter-TSS (NR_024526) promoter-TSS (NR_024526) 224 NM_017892 55660 Hs.643580 NM_017892 ENSG00000196504 PRPF40A FBP-11|FBP11|FLAF1|FNBP3|HIP-10|HIP10|HYPA|NY-REN-6|Prp40 PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) protein-coding 0.051282 0.591054 35(AGAGGCTT,-,0.00) -46(CCGCCTTCCCCC,+,0.00) -51(TTGTGCCG,+,0.00) -78(GCTTCCTGTTTC,-,0.00) 561_WT_peak_3981 chr2 24149487 24150188 + 204 NA non-coding (NR_125717, exon 1 of 29) non-coding (NR_125717, exon 1 of 29) 147 NR_125717 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family, AAA domain containing 2B protein-coding 0.116976 0.729345 234(TCGCCCTCCTCA,+,0.00) 456(CTCGGCGGCC,-,0.00),459(GGCGGCCGGG,+,0.00) 261(AGCCGCCA,-,0.00) -48(CCGAGAAGGCGG,-,0.00),23(CCGGGAGAGCCG,-,0.00),431(CCCCGCCCCCGG,+,0.00) 11(TCCACGCC,+,0.00) 512(CCGACCGC,+,0.00) -73(AGGCCCGGGA,-,0.00) 436(CCCCCGGC,-,0.00) 469(GAGCGACG,-,0.00) 248(GGGAGCCGAGCG,+,0.00) 16(GCCGCGCC,+,0.00),441(GGCGCGGC,-,0.00) 62(TCAGGGCCAGCG,+,0.00),444(GCGGCGTCAGCG,+,0.00) 70(AGCGGAGCCGAG,+,0.00),256(AGCGGAGCCGCC,+,0.00) -48(CCGAGAAG,-,0.00) 358(AGCCACGGCGGG,-,0.00) 372(GCTGCGAAGC,+,0.00) 561_WT_peak_1476 chr11 108337906 108338169 + 204 NA intron (NM_152587, intron 1 of 8) intron (NM_152587, intron 1 of 8) 221 NM_152587 160140 Hs.653180 NM_152587 HPRD:14579 C11orf65 - chromosome 11 open reading frame 65 protein-coding 0.049430 0.560606 88(AGTACGCG,-,0.00) -131(GCCCGACG,-,0.00) -52(GAGGCCTCGCTG,+,0.00) 561_WT_peak_1211 chr11 11863185 11864142 + 204 NA 5' UTR (NM_017944, exon 1 of 27) 5' UTR (NM_017944, exon 1 of 27) 693 NM_017944 55031 Hs.577256 NM_017944 ENSG00000170242 USP47 TRFP ubiquitin specific peptidase 47 protein-coding 0.086729 0.662839 333(CCACCCTCCACC,+,0.00),340(CCACCCTCCCCC,+,0.00) -160(GCTTTCGGCTCG,-,0.00),98(CGGGCCGAATTC,+,0.00) 200(GGCGGCGGAG,+,0.00),278(GGCGGCGGAG,+,0.00) -25(AAGCGTTT,+,0.00),175(AGGCGGCT,+,0.00) 350(CCGGCAGGGCGG,-,0.00) 68(CCGACGCC,+,0.00) 213(TGGGTCGG,-,0.00) 478(AGGCCCGGGC,-,0.00) 347(CCCCCGGC,-,0.00) -155(CGGCTCGA,-,0.00) 46(TAGCGACA,-,0.00),187(TAGCGGCG,-,0.00) 356(GGGCGGAGAGGA,-,0.00) -125(GTCCGAAG,-,0.00),66(CTCCGACG,-,0.00),92(GCCCGACG,-,0.00),163(GGCCGACG,-,0.00) 225(TGCGCGCT,-,0.00) 189(GCGGCGGCGGCG,+,0.00),192(GCGGCGGCGGCG,+,0.00),195(GCGGCGGCGGCG,+,0.00),500(GCGGGCCCGGCC,+,0.00) 99(GGGCCGAATT,+,0.00) -114(CCGAGAAG,-,0.00),627(CCGCCTCG,-,0.00) 201(GCGGCGGAGC,+,0.00) 561_WT_peak_6215-2 chr6 27777619 27777719 + 203 NA promoter-TSS (NM_003536) promoter-TSS (NM_003536) -173 NM_003536 8357 Hs.591778 NM_003536 HPRD:11912 HIST1H3H H3/k|H3F1K|H3FK histone cluster 1, H3h protein-coding 0.020000 0.336634 561_WT_peak_7246 chr9 34379592 34379814 + 203 NA exon (NM_032596, exon 6 of 7) exon (NM_032596, exon 6 of 7) 1895 NM_147168 84688 Hs.50334 NM_032596 HPRD:12949 C9orf24 CBE1|NYD-SP22|SMRP1|bA573M23.4 chromosome 9 open reading frame 24 protein-coding 0.063063 0.582960 -59(CATTCCGGGCCG,-,0.00) -53(GGGCCGGTGCTC,-,0.00) -85(GGCGGGGG,+,0.00) -20(GAAGGAGGAAGC,+,0.00) 50(TGGGCGGC,-,0.00) 561_WT_peak_5144 chr3 67704471 67705064 + 203 NA promoter-TSS (NR_109992) promoter-TSS (NR_109992) 271 NM_003848 8801 Hs.644919 NM_003848 HPRD:06799 SUCLG2 GBETA succinate-CoA ligase, GDP-forming, beta subunit protein-coding 0.091062 0.663300 176(GGCGCCCGAG,+,0.00),298(CCCGGCCGCC,-,0.00) 239(CCGGGCAGGCCG,-,0.00) 89(GGGCTGCCGCCG,-,0.00),406(GGGCGGGCGCGG,-,0.00) 391(CGGCACGG,-,0.00) -153(GGGCTGAAACGG,-,0.00) -40(CAAAACCC,+,0.00) 378(TAAACAGGAAAC,+,0.00) 30(TGCGCGGG,-,0.00),97(GCCGCGCC,+,0.00),188(GCCGCGCA,+,0.00) 246(GGCCGGCGCCGC,-,0.00) 148(CCCGGCGCCGCG,+,0.00),148(CCCGGCGCCGCG,-,0.00),182(CGAGGGGCCGCG,+,0.00) 387(AACTCGGCAC,-,0.00) 342(GCTTCCCGGC,-,0.00) 240(CGGGCAGGCCGG,-,0.00) 561_WT_peak_1619 chr12 14538001 14538599 + 203 NA 5' UTR (NM_181352, exon 1 of 15) 5' UTR (NM_181352, exon 1 of 15) 302 NM_181352 55729 Hs.504856 NM_018179 HPRD:09811 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding 0.000000 0.390651 -142(CAAAACTG,+,0.00) 561_WT_peak_6215 chr6 27775990 27776805 + 203 NA promoter-TSS (NM_003519) promoter-TSS (NM_003519) 420 NM_003509 8329 Hs.534035 NM_003509 HPRD:04153 HIST1H2AI H2A/c|H2AFC histone cluster 1, H2ai protein-coding 0.052761 0.514706 283(AGCCACCT,-,0.00) -106(CGGGCCGGGC,-,0.00) -107(TCGGGCCG,+,0.00) -105(GGGCCGGGCT,+,0.00),38(AACGCGGCCC,-,0.00) -111(CTTCTCGG,+,0.00) -133(CGCGCCAAGGCC,+,0.00) 561_WT_peak_1972 chr13 28842943 28843202 + 202 NA intron (NM_175854, intron 12 of 18) intron (NM_175854, intron 12 of 18) -129761 NR_029383 100288730 Hs.123191 NR_029383 PAN3-AS1 - PAN3 antisense RNA 1 ncRNA 0.000000 0.330769 561_WT_peak_6839 chr7 128864467 128864738 + 202 NA promoter-TSS (NM_015328) promoter-TSS (NM_015328) -253 NM_001130720 23382 Hs.600789 NM_015328 HPRD:11113 AHCYL2 ADOHCYASE3 adenosylhomocysteinase-like 2 protein-coding 0.088561 0.647059 -101(GCTGCCGGCCCT,-,0.00) 47(CGCGTGCG,+,0.00) 13(TAGGTCGG,-,0.00) 29(GTCCCACG,-,0.00) -16(TGCGGGCCCCGC,-,0.00),-15(GCGGGCCCCGCC,+,0.00) 561_WT_peak_2182 chr14 39902282 39902581 + 202 NA promoter-TSS (NM_203301) promoter-TSS (NM_203301) -727 NM_203301 254170 Hs.146632 NM_203301 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding 0.010033 0.426667 561_WT_peak_4726 chr20 62495578 62496365 + 202 NA promoter-TSS (NM_199363) promoter-TSS (NM_199363) -610 NM_001243895 7165 Hs.473296 NM_003288 HPRD:11947 TPD52L2 D54 tumor protein D52-like 2 protein-coding 0.066074 0.588832 544(CGCCCCGGAAGA,+,0.00) 129(GGAGGCCGAG,+,0.00) -29(TCCACGCC,+,0.00) 509(GCGCGCGAGCCC,+,0.00),515(GAGCCCCAGCAC,+,0.00) 44(CGCGTACA,+,0.00) 199(CGTCTCTA,+,0.00) 502(CGCCGAGGCGCG,+,0.00) -16(CGAGGCGG,+,0.00),135(CGAGGCGG,+,0.00),258(CTACTCGG,+,0.00) 179(GGCCAAGGTGGC,-,0.00),325(CGCGCCATGGCA,+,0.00) 561_WT_peak_6096 chr6 10404835 10405121 + 202 NA intron (NM_001042425, intron 3 of 6) CpG-21699 -7573 NR_033910 100130275 Hs.661431 NR_033910 TFAP2A-AS1 - TFAP2A antisense RNA 1 ncRNA 0.076923 0.637631 4(GGCGTCGT,-,0.00) 36(CCCCGGCCCT,+,0.00) -33(ACGGGGCCTGCG,+,0.00) 50(CCGGCCAGGGCC,+,0.00),52(GGCCAGGGCCGG,-,0.00) -160(GCTGAGGAGC,+,0.00) 561_WT_peak_1013 chr10 64615876 64616136 + 202 NA Intergenic Intergenic -37079 NM_001136178 1959 Hs.1395 NM_000399 HPRD:00551 EGR2 AT591|CMT1D|CMT4E|KROX20 early growth response 2 protein-coding 0.007692 0.344828 561_WT_peak_7645 chrY 10035828 10036602 + 202 NA Intergenic SSU-rRNA_Hsa|rRNA|rRNA 287808 NR_001540 252955 Hs.522846 NR_001540 ENSG00000239225 TTTY23 NCRNA00148|TTTY23B testis-specific transcript, Y-linked 23 (non-protein coding) ncRNA 0.042636 0.508387 557(AGTCGCTA,+,0.00) 430(CGGGTAAC,+,0.00) 595(GGATCGGCCC,-,0.00) 561_WT_peak_5655 chr4 190861518 190861859 + 202 NA promoter-TSS (NM_004477) promoter-TSS (NM_004477) -286 NM_004477 2483 Hs.203772 NM_004477 HPRD:03176 FRG1 FRG1A|FSG1 FSHD region gene 1 protein-coding 0.102639 0.669591 70(AGCCGCTT,-,0.00) -85(CGTCCGCG,-,0.00) -91(TCGCGACG,-,0.00),95(CGTCGCCA,+,0.00) -118(CCACCTCAGCCC,+,0.00) 37(GCCGCGCC,+,0.00),163(ACCGCGCC,+,0.00) 40(GCGCCGCCGC,-,0.00) 35(CAGCCGCGCCGC,-,0.00) 561_WT_peak_2267 chr14 69262157 69262981 + 201 NA intron (NM_001244701, intron 1 of 2) CpG 391 NM_001244701 677 Hs.85155 NM_004926 HPRD:03041 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein-like 1 protein-coding 0.089806 0.671515 255(TGACCCGGCGTC,+,0.00),527(ACTTCCGGGCCC,-,0.00) 576(GGCGGCCCAG,+,0.00) 36(CCCTCTCCCCGG,+,0.00),44(CCGGGGGCGCGG,-,0.00),342(GCGGGAGGGCGG,-,0.00),420(CCGCCCTCCCGC,+,0.00),524(CCGACTTCCGGG,+,0.00) -112(TCGGGCGG,-,0.00),114(CCGACCAA,+,0.00),485(CCGACCGG,+,0.00) -159(TCCCGGCCCA,+,0.00) 396(CCCCCGCC,-,0.00) 623(CGGTTTTG,-,0.00) 101(TTTACCGG,-,0.00),434(CTTACCCG,-,0.00) 216(GGGAGCCGAGAG,+,0.00) 438(CCCGCGCA,+,0.00) -147(GCCTGTCCCCGC,-,0.00),51(CGCGGGCTCCGC,-,0.00),252(CGCTGACCCGGC,-,0.00) -110(GGGCGGCGCC,+,0.00),-105(GCGCCGCTTT,+,0.00) 406(CTTCGCGG,+,0.00) 451(CAGGCTGGCCGC,-,0.00) 561_WT_peak_3962 chr2 10588825 10589276 + 201 NA promoter-TSS (NM_002539) promoter-TSS (NM_002539) -370 NM_001287188 4953 Hs.467701 NM_002539 HPRD:01324 ODC1 ODC ornithine decarboxylase 1 protein-coding 0.082040 0.674779 248(GGACCCGGATCC,+,0.00) 120(AGCCGCCT,-,0.00) 127(TCCACGCC,+,0.00) -101(TCGTGCCC,+,0.00) -12(GCCGCCCA,+,0.00),271(GCCGCCCA,+,0.00) -46(CGTGGGCCCCGC,-,0.00) 561_WT_peak_5363 chr3 193310800 193311263 + 201 NA promoter-TSS (NM_130835) promoter-TSS (NM_130835) 98 NM_015560 4976 Hs.594504 NM_015560 HPRD:05596 OPA1 MGM1|NPG|NTG|largeG optic atrophy 1 (autosomal dominant) protein-coding 0.086393 0.646552 69(CTCGGCCGCG,-,0.00) -8(AAGTGGTT,+,0.00) 172(TCGGCGCC,+,0.00) 135(GGGCTGGGGCTC,-,0.00) -117(AGGGCGGGGC,-,0.00) -33(TCGTGCTG,+,0.00),217(TCGGGCCG,+,0.00) 215(CGTCGGGC,+,0.00) 75(CGCGGCTCTGTG,-,0.00) 219(GGGCCGCTGT,+,0.00) -24(CCGCCTAG,-,0.00),168(CGTCTCGG,+,0.00) 561_WT_peak_3496 chr18 45457616 45458092 + 201 NA promoter-TSS (NM_001135937) promoter-TSS (NM_001135937) -337 NM_001003652 4087 Hs.12253 NM_005901 HPRD:03221 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding 0.126050 0.714885 -160(CCGCCTCCCCAG,+,0.00) 0(CCGCCCGA,+,0.00) -122(GCCGGGCG,+,0.00) -54(GGGCGGAGAGGG,-,0.00) 61(GTCCGTCG,-,0.00) -100(CGGTTTCG,-,0.00) -128(GGCGCGGC,-,0.00),-27(GCCGCGCA,+,0.00),109(CCCGCGCA,+,0.00) 207(GCGGGGCCCTCG,+,0.00) 166(GACCCGGCCC,-,0.00),232(GGGCGGGTTC,+,0.00) -136(CGAGGCGG,+,0.00),47(CCGCCTCG,-,0.00) -125(GCGGCCGGGCGG,+,0.00) 561_WT_peak_6756 chr7 94139227 94139578 + 201 NA exon (NM_022900, exon 1 of 18) exon (NM_022900, exon 1 of 18) 232 NM_022900 64921 Hs.260041 NM_022900 HPRD:13004 CASD1 C7orf12|NBLA04196 CAS1 domain containing 1 protein-coding 0.108262 0.744318 7(TGGCGGCT,+,0.00) 161(CCGGGCAGGCCG,-,0.00) 180(GGCGGCGA,-,0.00) -72(CGGCGGCAGCCC,+,0.00),75(GTGCTGGCGCTG,-,0.00) -150(GCCGCGGG,+,0.00) 126(CGCCGCTA,+,0.00) -127(GGGAGGCGCAGG,+,0.00) -24(GCCGCGCA,+,0.00) -29(GCTCCGCCGC,-,0.00) 561_WT_peak_7200 chr9 3526062 3527120 + 201 NA promoter-TSS (NM_001282116) promoter-TSS (NM_001282116) -590 NM_134428 5991 Hs.136829 NM_002919 HPRD:03215 RFX3 - regulatory factor X, 3 (influences HLA class II expression) protein-coding 0.084121 0.635505 371(TCGCCCTCCTGC,+,0.00),428(GGAGGAGCGCGG,-,0.00) 659(CTGCCCGGAGGC,+,0.00) 463(CTCTGCCGCC,-,0.00) 104(CGGGGGAGGGGG,-,0.00) 706(GGCGTAGA,-,0.00) -67(TGGCTGGGGCTG,-,0.00) 188(CCCCCGCC,-,0.00) -119(GGGCACGA,-,0.00),415(GGGCACGA,-,0.00) -155(CAAACCCG,+,0.00) 219(GCGGGGCGGGCA,+,0.00),334(CCGCGGCCTGCG,+,0.00),443(GCGGGGCGTGAG,+,0.00) 74(CCCGGAGCCACG,+,0.00),327(CAGGGCTCCGCG,-,0.00),522(CGCGGTGCCGCC,+,0.00) 181(AGAGCGGCCC,-,0.00) 509(CGAGTCGG,+,0.00) 190(CCCGCCCTGCCC,+,0.00) 331(GCTCCGCGGC,-,0.00),440(GCGGCGGGGC,+,0.00) 561_WT_peak_7070 chr8 95565555 95566019 + 200 NA promoter-TSS (NM_015496) promoter-TSS (NM_015496) -41 NM_015496 25962 Hs.202238 NM_015496 HPRD:10889 KIAA1429 fSAP121 KIAA1429 protein-coding 0.081897 0.608602 139(GGCGGAGGGCGC,-,0.00) -39(GCCGCGGG,+,0.00) 67(TAGCGCCG,-,0.00) 279(GGGTTTTG,-,0.00) 115(TGCCGGCCCCGC,-,0.00) 561_WT_peak_5777 chr5 65440064 65440913 + 200 NA promoter-TSS (NM_139168) promoter-TSS (NM_139168) -175 NM_139168 140890 Hs.49367 NM_139168 HPRD:18043 SREK1 SFRS12|SRrp508|SRrp86 splicing regulatory glutamine/lysine-rich protein 1 protein-coding 0.097762 0.612941 -95(CCGCTTTCCCGG,+,0.00) 198(GGCGTGGA,-,0.00) 142(GTGCTGGAGCTC,-,0.00) 212(CGCGGACG,+,0.00),214(CGGACGCG,-,0.00) 245(TCGCGCCG,+,0.00) -80(CGTCGCTG,+,0.00) -3(CGGTTTGG,-,0.00),315(CGGATTTG,-,0.00),576(CCGTTTTG,-,0.00) 189(GGGAGCCGAGGC,+,0.00) -161(TGGGCGGC,-,0.00),531(ACCGCGCC,+,0.00) -111(CGCGGCCGCGCG,-,0.00),111(CGAGGAGCTGCG,+,0.00) 561_WT_peak_6559 chr6 170862039 170862454 + 200 NA exon (NM_002793, exon 1 of 6) exon (NM_002793, exon 1 of 6) 171 NM_002793 5689 Hs.352768 NM_002793 HPRD:03603 PSMB1 HC5|PMSB1|PSC5 proteasome (prosome, macropain) subunit, beta type, 1 protein-coding 0.074699 0.612981 84(AAGTCTCT,+,0.00) 57(CCCGCGGC,-,0.00) -114(CCCCCTCAGCTC,+,0.00) 10(TTTACCCT,-,0.00) 59(CGCGGCTCTGTG,-,0.00) 561_WT_peak_1330 chr11 63753811 63754251 + 200 NA intron (NR_003089, intron 1 of 5) CpG 706 NM_017670 55611 Hs.473788 NM_017670 OTUB1 OTB1|OTU1 OTU deubiquitinase, ubiquitin aldehyde binding 1 protein-coding 0.093182 0.714286 75(CGAGGAGGGAGG,-,0.00) -84(CAACCCGGAAGC,+,0.00),55(GATGCCGGGCCA,-,0.00) -44(GGCGGCGGAG,+,0.00) -103(CCGGGAGGACGG,-,0.00),197(CCGGGAGGGAGC,-,0.00) 108(GGGGTCGA,-,0.00) -74(GCGGTCGG,-,0.00) 190(CCCCCGGC,-,0.00),229(CCCGCGGC,-,0.00) 65(CAGCTGCTCCCG,-,0.00) -151(CGTTGCTA,+,0.00) 58(GCCGGGCCAGCT,+,0.00),261(GCGGGGCCTGGG,+,0.00) 214(CGAGGCGG,+,0.00) -136(TGCCAAGGCGGG,-,0.00) 263(GGGGCCTGGGTC,+,0.00) 561_WT_peak_170 chr1 35657741 35658302 + 200 NA exon (NM_005066, exon 1 of 10) exon (NM_005066, exon 1 of 10) 722 NM_005066 6421 Hs.355934 NM_005066 HPRD:07284 SFPQ POMP100|PPP1R140|PSF splicing factor proline/glutamine-rich protein-coding 0.112299 0.775801 -52(GCCGCCGGGCCC,-,0.00) 75(AGGCCCGGGC,-,0.00) -149(GGCGGGGG,+,0.00),-40(GCCGGGCG,+,0.00),-36(GGCGGGGG,+,0.00),177(GCCGCGGG,+,0.00) -104(CGTCGCTC,+,0.00) -115(GGGAGCCGACGC,+,0.00) -154(GCGGGGGCGGGG,+,0.00),-50(CGCCGGGCCCGC,-,0.00),11(GCGGCCCCCGCG,+,0.00),286(GCGGGGTCGGAG,+,0.00),319(GCGGGGCCCCCG,+,0.00) 21(CGGGGCTCCCCG,-,0.00) 265(GGGCCGAGGT,+,0.00),352(GGGCCGAGCT,+,0.00) 33(CCGCCTCG,-,0.00),234(CTTGGCGG,+,0.00) 561_WT_peak_535 chr1 153931060 153931347 + 200 NA promoter-TSS (NM_181715) promoter-TSS (NM_181715) -71 NM_181715 200186 Hs.406392 NM_181715 HPRD:12347 CRTC2 TORC-2|TORC2 CREB regulated transcription coactivator 2 protein-coding 0.062718 0.593750 -107(CGCGGGGGCCGC,-,0.00) -140(AACCCGGCCC,-,0.00) 561_WT_peak_6044 chr5 179105612 179106459 + 200 NA exon (NM_001164444, exon 2 of 2) exon (NM_001164444, exon 2 of 2) 1940 NM_001164444 646019 Hs.535767 NM_001164444 ENSG00000204659 CBY3 - chibby homolog 3 (Drosophila) protein-coding 0.095632 0.667453 322(AGGCGGCT,+,0.00) 366(GGCGTGGA,-,0.00) 176(CGTAGGCG,-,0.00) 425(TCGTGCTG,+,0.00) 554(CGGCGGAC,+,0.00) 298(CAAAACTG,+,0.00) -138(TGCGCGCT,-,0.00) 83(GCGGCGACCGCG,+,0.00),547(GCGAGGCCGGCG,+,0.00) -50(CGCGCCATGGTC,+,0.00),260(GCCGCCGTGGCG,+,0.00) -106(GCGCCGCAGC,-,0.00) 561_WT_peak_2442 chr15 41913317 41913747 + 200 NA Intergenic CpG -39078 NM_001164273 23269 Hs.187569 NM_001080541 ENSG00000174197 MGA MAD5|MXD5 MGA, MAX dimerization protein protein-coding 0.095349 0.633411 137(TCGGCGCC,+,0.00) -70(GGGCGCCAGGCG,+,0.00) 123(CGCGTGCG,+,0.00) 177(AGGGGCGGGC,-,0.00) 133(CGACTCGG,+,0.00) -88(GCTCTGCAGC,-,0.00) 561_WT_peak_607 chr1 167904652 167905318 + 199 NA promoter-TSS (NM_018442) promoter-TSS (NM_018442) 454 NR_026550 25874 Hs.517768 NM_015415 HPRD:08525 MPC2 BRP44 mitochondrial pyruvate carrier 2 protein-coding 0.067568 0.610195 491(GCCTCCGGCCCC,-,0.00) 252(GGCGGCCGAC,+,0.00) 263(TCGCCGCC,+,0.00) 472(GACTGCCAGCCC,+,0.00) 365(CGCGTCCG,+,0.00) 404(TCCCTGCCCG,+,0.00) 394(CCCGCGGC,-,0.00) 435(CCCGCGCCCCGC,-,0.00) 443(CCGCGAAG,-,0.00) 474(CTGCCAGCCCCC,-,0.00) 561_WT_peak_4264 chr2 113190511 113191306 + 199 NA intron (NM_005054, intron 1 of 22).2 CpG 199 NM_005054 84220 Hs.469630 NM_005054 HPRD:04128 RGPD5 BS-63|BS63|HEL161|RGP5 RANBP2-like and GRIP domain containing 5 protein-coding 0.127044 0.739950 -146(GCCGCCGGGCCG,-,0.00),-57(GCCCCCGGGCCG,-,0.00),32(GCCGCCGGGCCG,-,0.00),122(GCCGCCGGGCCG,-,0.00),212(GCCGCCGGGCCG,-,0.00) -154(TCGAGGCC,+,0.00),-132(TCGAGGCC,+,0.00),-65(TCGAGGCC,+,0.00),-43(TCGAGGCC,+,0.00),24(TCGAGGCC,+,0.00),46(TCGAGGCC,+,0.00),114(TCGAGGCC,+,0.00),204(TCGAGGCC,+,0.00),226(TCGAGGCC,+,0.00),251(TCGAGGCC,+,0.00) 381(CGCGTGCG,+,0.00) 579(TCGGCCGG,-,0.00) 239(CGCCCGGC,-,0.00) 355(TCGCGCCG,+,0.00) 392(ACCGCTCAGCCC,+,0.00) 495(GCCGCCCA,+,0.00) -140(GGGCCGGGTC,+,0.00),-51(GGGCCGGGTC,+,0.00),38(GGGCCGGGTC,+,0.00),218(GGGCCGGGTC,+,0.00),492(GGCGCCGCCC,-,0.00),593(GGCGCCGCCC,-,0.00) 375(CCGAGACG,-,0.00) 400(GCCCCGCAGC,-,0.00) -156(CATCGAGGCCGC,-,0.00),-145(CCGCCGGGCCGG,-,0.00),-67(CATCGAGGCCGC,-,0.00),22(CATCGAGGCCGC,-,0.00),33(CCGCCGGGCCGG,-,0.00),112(CATCGAGGCCGC,-,0.00),123(CCGCCGGGCCGG,-,0.00),202(CATCGAGGCCGC,-,0.00),213(CCGCCGGGCCGG,-,0.00),336(TCGGCCTTGCTG,+,0.00),579(TCGGCCGGGCTG,+,0.00) 561_WT_peak_4775 chr21 34863966 34864376 + 199 NA promoter-TSS (NM_017833) promoter-TSS (NM_017833) -141 NM_001040192 54943 Hs.458308 NM_017833 HPRD:10752 DNAJC28 C21orf55|C21orf78 DnaJ (Hsp40) homolog, subfamily C, member 28 protein-coding 0.070732 0.608273 9(GGCGTCGA,-,0.00) -122(CCGACCGG,+,0.00),-70(CCGGCCGA,+,0.00) -127(TCGTCCCG,+,0.00) 105(TTTCCCCG,-,0.00) -98(CTCCGTCCCCGC,-,0.00) 561_WT_peak_6896 chr7 150118319 150118480 + 199 NA Intergenic Intergenic -12343 NR_034033 285972 Hs.647110 NR_034033 ENSG00000242258 LINC00996 - long intergenic non-protein coding RNA 996 ncRNA 0.031056 0.469136 -43(GGCGTCCA,-,0.00) -83(GGGCCGCATT,+,0.00) 561_WT_peak_1970 chr13 28024141 28024829 + 199 NA promoter-TSS (NM_001166261) promoter-TSS (NM_001166261) -151 NM_001166261 219402 Hs.534582 NM_152912 HPRD:17609 MTIF3 IF3mt mitochondrial translational initiation factor 3 protein-coding 0.103198 0.644412 295(GATGCCGGTCCG,-,0.00) 137(AGCGGCCT,-,0.00) -41(GGCGGCGA,-,0.00),-37(GCGACGCC,+,0.00) -7(GAGCGCCAGGGC,+,0.00) 503(CCGACAGA,+,0.00) 131(TCGTGCAG,+,0.00) 5(TAGAGACG,-,0.00),18(TAGCGACG,-,0.00) 204(GCCTCTCCGCCC,+,0.00) 303(TCCGCGCA,+,0.00) 464(GGCGGAGCCACG,+,0.00) 423(GGGCGGGGCT,+,0.00),463(GGGCGGAGCC,+,0.00) -40(GCGGCGACGC,+,0.00),196(CCTGCGGAGC,+,0.00) 138(GCGGCCTCGCTG,+,0.00) 561_WT_peak_5096 chr3 48513953 48514572 + 199 NA intron (NM_001272065, intron 3 of 5) intron (NM_001272065, intron 3 of 5) 480 NM_001272082 51246 Hs.414579 NM_016479 HPRD:06290 SHISA5 SCOTIN shisa family member 5 protein-coding 0.021002 0.558065 147(AGGTGTCT,+,0.00),327(AGAGGCCT,-,0.00) 97(CAGCCCCAGGCC,+,0.00) 403(GAAAAAGAAAGC,+,0.00),437(GCCACAGGAAGC,+,0.00) 561_WT_peak_1751 chr12 66563132 66563983 + 199 NA intron (NM_001282606, intron 1 of 7) CpG 295 NM_001282610 51643 Hs.505934 NM_016056 ENSG00000155957 TMBIM4 GAAP|LFG4|S1R|ZPRO transmembrane BAX inhibitor motif containing 4 protein-coding 0.077556 0.605634 303(AAGCGGCT,+,0.00) 530(GGCGTCGG,-,0.00) 113(GGCCTGGCGCCC,-,0.00),174(GGGCGCCAGTCC,+,0.00) 548(CCGAGCGA,+,0.00) 204(AGGGCCGGGA,-,0.00) -148(TAGTGCCG,+,0.00) 589(CGGAGAAAGCGG,+,0.00) 61(GCGGCGCCCGCT,+,0.00),528(GCGGCGTCGGCG,+,0.00) 112(GGGCCTGGCGCC,-,0.00) 70(GCTGGGGAGC,+,0.00),308(GCTGGGAGGC,+,0.00) 561_WT_peak_673 chr1 199010741 199011114 + 199 NA Intergenic Intergenic -22834 NR_110525 102800316 Hs.568480 NR_110525 LINC01222 TCONS_00000112 long intergenic non-protein coding RNA 1222 ncRNA 0.008043 0.395722 561_WT_peak_2775 chr16 30103167 30103425 + 199 NA promoter-TSS (NM_004608) promoter-TSS (NM_004608) -91 NM_004608 6911 Hs.198301 NM_004608 HPRD:03888 TBX6 SCDO5 T-box 6 protein-coding 0.124031 0.710425 11(CCGACCGC,+,0.00) 23(GGGCTGCGAGGC,-,0.00) -136(GTCCGACA,-,0.00),9(GTCCGACC,-,0.00) 39(GGCGCGGT,-,0.00) -14(CGCGGGGGCCGC,-,0.00),28(GCGAGGCCGGCG,+,0.00) -48(CGCTGAGGCGCG,+,0.00) 68(CTAGGCGG,+,0.00) 25(GCTGCGAGGC,+,0.00) 561_WT_peak_5576 chr4 109541144 109541993 + 199 NA promoter-TSS (NR_026968) promoter-TSS (NR_026968) 45 NR_026968 285456 Hs.683863 NM_182591 HPRD:08228 RPL34-AS1 - RPL34 antisense RNA 1 (head to head) ncRNA 0.031802 0.483529 491(AATCGGCT,+,0.00) 90(GAGCTGGCGCCC,-,0.00) 265(CGGCACGT,-,0.00) 314(CGTCGGAG,+,0.00) 643(CAAAGCCG,+,0.00) 561_WT_peak_2187 chr14 50052642 50053832 + 199 NA promoter-TSS (NM_001032) promoter-TSS (NM_001032) -103 NM_001030001 6235 Hs.156367 NM_001032 HPRD:04698 RPS29 DBA13|S29 ribosomal protein S29 protein-coding 0.059664 0.517212 -148(AGACGCCT,-,0.00) 635(CCGGGAGCGGGG,-,0.00) -117(CGCGTACT,+,0.00),362(CGCGTGCG,+,0.00) 486(CCGACCGC,+,0.00) 492(GCCGGGCG,+,0.00) -62(CCGTGCCG,+,0.00),75(CGGCACCA,-,0.00),107(TCGTGCCG,+,0.00) 287(AGGAAGAAGCTG,+,0.00) -20(CGGTTTTG,-,0.00) 333(TTTACCCA,-,0.00) 366(TGCGCAGT,-,0.00),496(GGCGCGGT,-,0.00) 74(GCGGCACCAGCG,+,0.00) 498(CGCGGTGGCGCG,+,0.00) 673(GAACCGGCCC,-,0.00) 525(CTACTCGG,+,0.00) 561_WT_peak_1771 chr12 75905195 75905420 + 198 NA exon (NM_007043, exon 1 of 10) exon (NM_007043, exon 1 of 10) 111 NM_007043 11103 Hs.645517 NM_007043 HPRD:11027 KRR1 HRB2|RIP-1 KRR1, small subunit (SSU) processome component, homolog (yeast) protein-coding 0.062222 0.504425 -90(GCTTCGGTTCCC,-,0.00) 561_WT_peak_3117 chr17 31149450 31149842 + 198 NA intron (NM_015194, intron 1 of 21) CpG 54256 NM_015194 4642 Hs.602063 NM_015194 HPRD:07581 MYO1D PPP1R108|myr4 myosin ID protein-coding 0.160714 0.821883 -78(CCCGCCTCCTCC,+,0.00) 78(GGTTCCGGCCCT,-,0.00) -7(GGCGGCCGCG,+,0.00) -112(GCGCGTCCCCGG,+,0.00),-14(CCGCGGAGGCGG,-,0.00),28(CCCCCGTCCCGG,+,0.00),58(CCGGTGGGGCGG,-,0.00) 154(GGCGGCGA,-,0.00) -104(CCGGTCGG,-,0.00),182(CCGGCCGA,+,0.00),210(TCAGTCGG,-,0.00) 80(TTCCGGCCCT,+,0.00) -122(GGCGGGGG,+,0.00) -92(CCGCTTCTTCGG,-,0.00) -87(TCTTCGGTTCCC,-,0.00) -3(GCCGCGCC,+,0.00) 22(CGCCGGCCCCCG,-,0.00),50(CGCGGGCCCCGG,-,0.00) 1(CGCCGAGCCGGG,+,0.00) 155(GCGGCGAGGC,+,0.00) 561_WT_peak_1597 chr12 11323759 11324412 + 198 NA non-coding (NR_037918, exon 1 of 10) non-coding (NR_037918, exon 1 of 10) 137 NM_001291314 5554 Hs.656965 NM_006250 HPRD:01349 PRH1 PA proline-rich protein HaeIII subfamily 1 protein-coding 0.101072 0.662080 259(GCCTCCGGGGCC,-,0.00) 401(GGCGGCCGGG,+,0.00) -72(AGCCGCTT,-,0.00) 15(GGCGGCGA,-,0.00) -149(GAGCGCCAGCGG,+,0.00) 98(CTCGTACG,+,0.00) 39(CCCGCGGC,-,0.00) -55(TCCTGCCG,+,0.00) -39(CGTCGCTA,+,0.00),-6(CCTCGCTA,+,0.00) 164(GCTGCGCA,+,0.00),302(GGCGCGGC,-,0.00) -141(GCGGCGCCCGGG,+,0.00),-107(GCGGCGGCAGCG,+,0.00),-24(CGCGGGCCCTGC,-,0.00),-23(GCGGGCCCTGCG,+,0.00),263(CCGGGGCCAGCA,+,0.00) -133(CGGGGCTACGCG,-,0.00) -73(GAGCCGCTTT,+,0.00) 191(CGTCGCGG,+,0.00) 79(GCCCCGCCGC,-,0.00),156(GCCTGGCAGC,-,0.00),305(GCGGCGGAGC,+,0.00) 561_WT_peak_7125 chr8 122834977 122835293 + 198 NA Intergenic Intergenic -181505 NM_005328 3037 Hs.159226 NM_005328 HAS2 - hyaluronan synthase 2 protein-coding 0.012658 0.384858 561_WT_peak_5652 chr4 186317037 186317586 + 198 NA promoter-TSS (NM_181726) promoter-TSS (NM_181726) -529 NM_181726 353322 Hs.508154 NM_181726 HPRD:17461 ANKRD37 Lrp2bp ankyrin repeat domain 37 protein-coding 0.116576 0.680000 197(GGAGGCGGGCGA,-,0.00) -141(AGACGCTT,-,0.00),-26(AGCGGCTT,-,0.00),270(AGCGGCTT,-,0.00) 19(CCGCTCTCCCGG,+,0.00) 42(GGCGTGGA,-,0.00),241(GGCGCCGA,-,0.00),286(GGCGTCGA,-,0.00) 4(CGCACGCG,-,0.00),329(CGTGCGCG,-,0.00) 114(CGGGCCGGGC,-,0.00) 347(CAAAACCT,+,0.00) 179(CCTTCACCTCCC,-,0.00) 310(GCTCCCAGTTTC,-,0.00) 110(TGCGCGGG,-,0.00) -38(GCGGGGCCGGAC,+,0.00),168(CGCCGTCCCCGC,-,0.00) 294(CGGGGAGCTGCG,+,0.00) 115(GGGCCGGGCT,+,0.00) 246(CGAGGCGG,+,0.00) 561_WT_peak_4655 chr20 45986149 45986563 + 198 NA promoter-TSS (NM_001281779) promoter-TSS (NM_001281779) -723 NM_183048 23613 Hs.446240 NM_012408 HPRD:10166 ZMYND8 PRKCBP1|PRO2893|RACK7 zinc finger, MYND-type containing 8 protein-coding 0.050725 0.595181 40(CGCGGCCGAG,+,0.00) 19(CTTCCCTCCCGG,+,0.00) -152(AGGCCAGGGA,-,0.00),25(TCCCGGCCCC,+,0.00) 38(CCCGCGGC,-,0.00) -54(CCCTCTCGGTCC,+,0.00),22(CCCTCCCGGCCC,+,0.00) -146(GGGAGCCGTGGG,+,0.00),105(CCTTCGGCTTCC,-,0.00) 142(GGGGCCTGGCTG,+,0.00) 561_WT_peak_567 chr1 156786367 156786754 + 198 NA promoter-TSS (NM_001161441) promoter-TSS (NM_001161441) 80 NM_003975 9047 Hs.103527 NM_003975 HPRD:05152 SH2D2A F2771|SCAP|TSAD|VRAP SH2 domain containing 2A protein-coding 0.025840 0.582474 61(CCCTGGCCCCGG,-,0.00) 162(GCCACGCAGC,-,0.00) 561_WT_peak_1126 chr10 103453907 103454566 + 198 NA exon (NM_022039, exon 1 of 9) exon (NM_022039, exon 1 of 9) 507 NM_022039 6468 Hs.500822 NM_022039 HPRD:06994 FBXW4 DAC|FBW4|FBWD4|SHFM3|SHSF3 F-box and WD repeat domain containing 4 protein-coding 0.097117 0.725758 -113(GGAGGAGGGGCA,-,0.00),289(TCCTCCTCCTCC,+,0.00),292(TCCTCCTCCTCC,+,0.00),295(TCCTCCTCCTCC,+,0.00),298(TCCTCCTCCTCC,+,0.00) 46(GGCGGGCGAG,+,0.00),176(GGCGGCCGAG,+,0.00),309(CCCGGCCGCC,-,0.00) 282(AGCCGCCT,-,0.00) 12(CCCGGGACGCGG,-,0.00),302(CCTCCTCCCCGG,+,0.00),394(GCGCCCTCCCGC,+,0.00),458(CCTCCTTCCCGG,+,0.00) 484(TCGACTCC,+,0.00) 243(GAGCGCAGGCCC,+,0.00),388(GGCCTGGCGCCC,-,0.00) 0(GCCCCGCCCT,+,0.00),104(AGGCCCGGGC,-,0.00),464(TCCCGGCCCC,+,0.00) 253(CCCGCGGC,-,0.00),259(GCCGGGCG,+,0.00) -31(CGACACGA,-,0.00) 429(CTCCTTCTTCCC,-,0.00) 481(CCCTCGACTCCC,-,0.00) 20(GCGGGGCCGGCT,+,0.00),117(CCGGCGCCAGAG,+,0.00),150(CCGCAGCCAGCG,+,0.00),246(CGCAGGCCCCGC,-,0.00),333(CCCTGTCCCCGC,-,0.00) -6(CGCGGCGCCCCG,+,0.00),-6(CGCGGCGCCCCG,-,0.00),74(TGCCGAGCCGCG,+,0.00) 405(CCGCCTAG,-,0.00) 319(GCCGCCATGGCC,+,0.00),321(CGCCATGGCCAC,-,0.00) 147(GCGCCGCAGC,-,0.00),251(GCCCCGCGGC,-,0.00) -15(CGACCAGGCCGC,-,0.00),256(GCGGCCGGGCGG,+,0.00),386(CCGGCCTGGCGC,+,0.00) 561_WT_peak_6886 chr7 148684158 148684468 + 198 NA Intergenic HY1|scRNA|scRNA 41469 NM_004911 9601 Hs.93659 NM_004911 HPRD:06501 PDIA4 ERP70|ERP72|ERp-72 protein disulfide isomerase family A, member 4 protein-coding 0.012903 0.366559 6(CTTCGGAC,+,0.00) 561_WT_peak_6325 chr6 42713453 42713864 + 198 NA exon (NM_003192, exon 1 of 1) exon (NM_003192, exon 1 of 1) 226 NM_003192 6903 Hs.75064 NM_003192 HPRD:04276 TBCC CFC tubulin folding cofactor C protein-coding 0.085158 0.609223 150(GTCTCCGGTCCT,-,0.00) -127(AAGCGGCT,+,0.00),-126(AGCGGCTA,-,0.00),19(AAGTGGCT,+,0.00),108(AAGCCGCT,+,0.00) 9(GGCGACGA,-,0.00) -162(CCGCGCCAGCGC,+,0.00) -130(CGTAAGCG,-,0.00) -50(TCGACCGA,+,0.00) 8(TGGCGACG,-,0.00) 55(CGCTTTTG,-,0.00) 206(GCTTCCTCTCTC,-,0.00) -163(GCCGCGCC,+,0.00) -163(GCCGCGCCAGCG,+,0.00) 169(GCAGCGGAGC,+,0.00) 561_WT_peak_4575 chr20 18487968 18488530 + 198 NA promoter-TSS (NM_032986) promoter-TSS (NM_032986) 39 NM_001172746 10483 Hs.369373 NM_006363 HPRD:11543 SEC23B CDA-II|CDAII|CDAN2|HEMPAS Sec23 homolog B (S. cerevisiae) protein-coding 0.080071 0.580817 -47(CGTAAGCG,-,0.00) 333(TCCGTCGG,-,0.00) -18(CCGCCCCTTCCG,-,0.00) -139(AAGCGACG,-,0.00) 332(GTCCGTCG,-,0.00),335(CGTCGGAG,+,0.00) 42(GCTCCCTGTTCC,-,0.00) 160(CGCTGGCTGCGC,-,0.00) -42(GCGCCGCCGC,-,0.00) 561_WT_peak_6320 chr6 42018307 42018576 + 198 NA intron (NM_138572, intron 1 of 8) CpG 190 NM_138572 129685 Hs.520122 NM_138572 HPRD:18167 TAF8 43|II|TAF|TAFII-43|TAFII43|TBN TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa protein-coding 0.070632 0.618519 -11(CGTAGGCG,-,0.00) -143(AGGGCAGGAA,-,0.00) -126(CTCGGAGCCGAG,+,0.00) 561_WT_peak_2166 chr14 34512945 34513345 + 197 NA Intergenic Intergenic -92861 NM_022073 112399 Hs.135507 NM_022073 HPRD:06972 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia-inducible factor 3 protein-coding 0.005000 0.501247 121(AGCCACAT,-,0.00) 561_WT_peak_662 chr1 192544655 192544997 + 197 NA promoter-TSS (NM_002922) promoter-TSS (NM_002922) -31 NM_002922 5996 Hs.75256 NM_002922 HPRD:15968 RGS1 1R20|BL34|HEL-S-87|IER1|IR20 regulator of G-protein signaling 1 protein-coding 0.017544 0.413994 561_WT_peak_1388 chr11 67120702 67121017 + 197 NA exon (NM_021173, exon 1 of 4) exon (NM_021173, exon 1 of 4) 208 NM_001256870 57804 Hs.523829 NM_021173 POLD4 POLDS|p12 polymerase (DNA-directed), delta 4, accessory subunit protein-coding 0.050794 0.664557 -8(GCTTCCGGCCCA,-,0.00) -12(AGCCGCTT,-,0.00) -37(CACAACCG,+,0.00) -1(GCCCATGGCGGC,-,0.00) 561_WT_peak_5058 chr3 37034180 37034657 + 197 NA promoter-TSS (NM_000249) promoter-TSS (NM_000249) 377 NM_014805 9852 Hs.28020 NM_014805 HPRD:07445 EPM2AIP1 - EPM2A (laforin) interacting protein 1 protein-coding 0.085954 0.638075 7(TCGCCGTCCGCC,+,0.00) -94(GGCGGCAGAG,+,0.00) 92(GGCGGCGA,-,0.00) 68(CGCGTTCG,+,0.00),70(CGTTCGCG,-,0.00) -76(CTGCACGA,-,0.00),163(TCGGGCCG,+,0.00) 80(TAGCTACG,-,0.00) -130(CCCCCTCACCCC,+,0.00) 561_WT_peak_6137 chr6 26026756 26027647 + 197 NA TTS (NM_003544) TTS (NM_003544) 279 NM_003544 8366 Hs.143080 NM_003544 HPRD:11920 HIST1H4B H4/I|H4FI histone cluster 1, H4b protein-coding 0.057239 0.495516 449(GGCGCCGA,-,0.00) 587(GGTACGCG,-,0.00) 389(CGCCACGA,-,0.00) 629(CATCGGAC,+,0.00) 462(CGGTTTGG,-,0.00) 140(CGAGTAAA,+,0.00),291(CGCGTAAA,+,0.00) 204(TGGGCGGC,-,0.00) 561_WT_peak_7019 chr8 52811809 52812208 + 197 NA promoter-TSS (NM_052937) promoter-TSS (NM_052937) -262 NM_001286783 115294 Hs.671268 NM_052937 HPRD:08313 PCMTD1 - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding 0.067669 0.622500 79(AGAGGCTT,-,0.00) 208(GCCCCGCCCT,+,0.00) 134(GTGCCGCTTT,+,0.00) -39(CTTGTCGG,+,0.00) 199(GCCGCCTGGGCC,+,0.00) -30(GCCTCGCCGC,-,0.00) 561_WT_peak_5070 chr3 41240556 41241230 + 197 NA promoter-TSS (NM_001098210) promoter-TSS (NM_001098210) -49 NM_001904 1499 Hs.476018 NM_001904 HPRD:00286 CTNNB1 CTNNB|MRD19|armadillo catenin (cadherin-associated protein), beta 1, 88kDa protein-coding 0.115727 0.725926 466(CCTTCCGGGGCT,-,0.00) 45(AGCCGCCA,-,0.00),229(AGCGGCTT,-,0.00),276(AAGCCTCT,+,0.00),380(AGCCGCCA,-,0.00) -16(CCGGCCTCCCCG,+,0.00),54(CCGTCACCCCGG,+,0.00) -79(GGCGTCGG,-,0.00) 283(TCGGTCTG,-,0.00),401(ACGGTCGG,-,0.00) -143(GCCGCGGG,+,0.00),-85(GGCGGGGG,+,0.00),-27(GCCGCGGG,+,0.00),412(CCCGCGGC,-,0.00) 218(CGGCAGGA,-,0.00) -77(CGTCGGGC,+,0.00),403(GGTCGGAC,+,0.00) 31(GCCGCGCA,+,0.00),131(TGGGCGGC,-,0.00) -148(CGCAGGCCGCGG,-,0.00),-89(GCGGGGCGGGGG,+,0.00),300(CGTTGGCCCGGC,-,0.00) 375(CGCCGAGCCGCC,+,0.00) 31(GCCGCGCAGC,-,0.00) -34(AACCCAGGCCGC,-,0.00),374(CCGCCGAGCCGC,-,0.00) 561_WT_peak_5971 chr5 142984916 142985197 + 197 NA Intergenic Intergenic -74369 NR_049829 100846991 NR_049829 miRBase:MI0018176 MIR5197 - microRNA 5197 ncRNA 0.007117 0.411348 -23(AACCACTT,-,0.00) -62(CGGGTAAC,+,0.00) 561_WT_peak_4187 chr2 88315513 88316452 + 197 NA Intergenic U2|snRNA|snRNA -30673 NM_001024457 400966 Hs.728970 NM_001024457 ENSG00000187627 RGPD1 RGP1|RGPD2|RanBP2L2 RANBP2-like and GRIP domain containing 1 protein-coding 0.036209 0.472340 39(AGCCACCT,-,0.00) 282(CAAAACTG,+,0.00) 394(GTTACCCG,-,0.00),708(CGGGTAAA,+,0.00) 134(GAAATTGGAAGC,+,0.00) -128(GCTGAGAGGC,+,0.00) 561_WT_peak_7244 chr9 33289930 33290978 + 197 NA promoter-TSS (NM_147133) promoter-TSS (NM_147133) 36 NM_147133 4799 Hs.413074 NM_002504 HPRD:11936 NFX1 NFX2|TEG-42|Tex42 nuclear transcription factor, X-box binding 1 protein-coding 0.069656 0.572927 621(TAGTGGCT,+,0.00) 231(TCGCCGCC,+,0.00),812(GGCGTCGG,-,0.00) 322(CGAACGCG,-,0.00),654(TGCGTACG,+,0.00) 289(CCGCCCGA,+,0.00) 508(TCCCGGCCCG,+,0.00) -16(CGGCAGGA,-,0.00),317(CGTCACGA,-,0.00),468(CGGCACGG,-,0.00),511(CGGCCCGA,-,0.00) 43(CGTCTCTA,+,0.00) 814(CGTCGGCC,+,0.00) 488(GCCTCCTGTCTC,-,0.00) 60(GCTGCGCA,+,0.00),344(GCTGCGCA,+,0.00),643(CCCGCGCA,+,0.00) 527(GGGCCCCTTT,+,0.00) 561_WT_peak_499 chr1 149832150 149832941 + 197 NA exon (NM_001034077, exon 1 of 1).2 exon (NM_001034077, exon 1 of 1).2 180 NM_001034077 554313 Hs.55468 NM_001034077 ENSG00000182217 HIST2H4B H4/o histone cluster 2, H4b protein-coding 0.077118 0.560606 544(TCTCCCTCCTCC,+,0.00),547(CCCTCCTCCTCC,+,0.00) 66(GGCGGCCTAG,+,0.00) -153(AAGCCGCT,+,0.00),-152(AGCCGCTT,-,0.00),244(ATCCGCTT,-,0.00) 270(TAGACGCC,+,0.00) 114(CGCGTACA,+,0.00) 502(TCCCCGCCCT,+,0.00) 140(CGGTCTTG,-,0.00),463(GAAAACCG,+,0.00) 592(TTTAACCG,-,0.00) -105(GGGCCGCGGT,+,0.00) 256(CCGCCACG,-,0.00) 255(GCCGCCACGCCG,+,0.00) 561_WT_peak_5609 chr4 146019321 146019843 + 197 NA promoter-TSS (NM_001256706) promoter-TSS (NM_001256706) 111 NM_001256708 10393 Hs.480876 NM_014885 ANAPC10 APC10|DOC1 anaphase promoting complex subunit 10 protein-coding 0.090038 0.627151 -146(GGCGTTGA,-,0.00),251(GCGACGCC,+,0.00) -40(CGCGTGCG,+,0.00) 148(TAGGGACG,-,0.00) 300(GGCTGTCGCCGC,-,0.00) 561_WT_peak_3489 chr18 42305658 42305963 + 196 NA intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 44947 NM_015559 26040 Hs.435458 NM_015559 HPRD:10224 SETBP1 SEB SET binding protein 1 protein-coding 0.009836 0.513072 -136(CTCGGCCCCC,-,0.00) -140(CCCCCTCGGCCC,+,0.00) -138(CCCTCGGCCCCC,-,0.00) 561_WT_peak_7120 chr8 119102061 119102351 + 196 NA intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 21852 NM_000127 2131 Hs.492618 NM_000127 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding 0.010345 0.477663 -63(AGGAAGAAGCAG,+,0.00) 561_WT_peak_7430 chr9 129748134 129748449 + 196 NA intron (NM_014636, intron 4 of 18) intron (NM_014636, intron 4 of 18) 23787 NM_001190728 9649 Hs.432842 NM_014636 HPRD:11479 RALGPS1 RALGEF2|RALGPS1A Ral GEF with PH domain and SH3 binding motif 1 protein-coding 0.015873 0.468354 -6(AACCACTT,-,0.00) -120(GAAAGGGGAAGC,+,0.00) 561_WT_peak_2406 chr15 22833316 22833973 + 196 NA exon (NM_052903, exon 1 of 23) exon (NM_052903, exon 1 of 23) 249 NM_001102610 114791 Hs.533898 NM_052903 HPRD:12177 TUBGCP5 GCP5 tubulin, gamma complex associated protein 5 protein-coding 0.136986 0.731003 291(GGCGGAGGCGGG,-,0.00) 211(GCGGGTTCCCGG,+,0.00) -148(CAGCGCCAGGCA,+,0.00),449(CGGCCGGCGCGC,-,0.00) -97(GCGGTCGG,-,0.00),71(TCGGTTGG,-,0.00) -80(CGCCCGGC,-,0.00) -23(CGGCAGGA,-,0.00),51(CGGCACGG,-,0.00),443(TCTTGCCG,+,0.00) 249(CCCGCACAGCCC,+,0.00) 394(GTTACCCG,-,0.00),421(CGGGGAAA,+,0.00) 47(GGCGCGGC,-,0.00),301(GGCGCGGC,-,0.00),365(GGCGCGGT,-,0.00) 230(CCGGAGCCCGCG,+,0.00),322(CGCAGGCCCTGC,-,0.00) 209(GGGCGGGTTC,+,0.00) 561_WT_peak_3763 chr19 39993288 39993578 + 196 NA intron (NM_016941, intron 3 of 7) CpG 3876 NM_016941 10683 Hs.127792 NM_016941 HPRD:04140 DLL3 SCDO1 delta-like 3 (Drosophila) protein-coding 0.100000 0.714777 -42(TCGGCCGG,-,0.00) 110(TCGTACCG,+,0.00) 49(GGCAGCCGGAGG,+,0.00) 81(AGCGCGCA,+,0.00) -2(CGCAGGGCCCGC,-,0.00) 45(GCTTGGCAGC,-,0.00) 561_WT_peak_455 chr1 146555939 146556775 + 196 NA promoter-TSS (NR_121645) promoter-TSS (NR_121645) -54 NR_121645 101447996 NR_121645 RNVU1-8 RNU1-145|vU1.8 RNA, variant U1 small nuclear 8 snRNA 0.061005 0.537634 482(CCACCCTCCGCC,+,0.00) 629(TGAACCGGAGTC,+,0.00) 450(GCGCCTTCCCCG,+,0.00) 278(TCGAGGCC,+,0.00) 364(TCGTGGCG,+,0.00) 318(GTCCGACC,-,0.00) 594(GGGTTTTG,-,0.00) 246(TTTACACG,-,0.00) 267(CCCGCGCA,+,0.00) 561_WT_peak_5364 chr3 194304401 194305042 + 196 NA promoter-TSS (NR_047575) promoter-TSS (NR_047575) -276 NR_047574 100507297 Hs.586059 NR_047573 TMEM44-AS1 - TMEM44 antisense RNA 1 ncRNA 0.099844 0.651090 383(TGGACCGAAGTC,+,0.00) 443(AGGCCTCT,+,0.00) 107(CGCGGGAGGCGG,-,0.00),154(CGTTCTTCCCGG,+,0.00) 132(CGCACGCG,-,0.00) 87(GCCGCGGG,+,0.00) 316(TGGCACGA,-,0.00) -26(CAAAACTG,+,0.00) 50(CCTTCGGCTGCG,-,0.00),463(GGCAGCCGATGG,+,0.00) -82(ACCGCGCC,+,0.00) 82(GCGGGGCCGCGG,+,0.00) 81(GGCGGGGCCGCG,+,0.00),138(CGCGGAACCGCA,+,0.00) 18(GCGTCGCCGC,-,0.00),74(GCGGCGGGGC,+,0.00) 561_WT_peak_6662 chr7 44836320 44837005 + 196 NA intron (NM_021130, intron 1 of 4) CpG 427 NM_001300981 5478 Hs.356331 NM_021130 HPRD:00457 PPIA CYPA|CYPH|HEL-S-69p peptidylprolyl isomerase A (cyclophilin A) protein-coding 0.106569 0.683673 83(GGAGGAGGCCGG,-,0.00) 205(CTCGGCGGCC,-,0.00),208(GGCGGCCGCG,+,0.00) 79(GCGGGGAGGAGG,-,0.00),91(CCGGGACGGCGG,-,0.00),156(CCGCCCGCCCGC,+,0.00),312(CCGCCTTCCTGG,+,0.00) -130(GCCGTCGA,-,0.00),-126(TCGACGGC,+,0.00) 151(CGCGTCCG,+,0.00) -90(TCGGGCGG,-,0.00) -17(AGGCCCGGGC,-,0.00) 100(CGGCGGAC,+,0.00),191(GTCCGACG,-,0.00) 176(GCCGCGCC,+,0.00),405(GGCGCGGT,-,0.00) -110(GGGCCGCGTC,+,0.00),245(GGCTCCGCCC,-,0.00) 29(GCTGCGGCGC,+,0.00),124(GCTGCGAGGC,+,0.00),364(GCTGGGAAGC,+,0.00) 21(GCGGGCGGGCTG,+,0.00) 561_WT_peak_7352 chr9 95726373 95726926 + 196 NA intron (NM_001286993, intron 1 of 17) intron (NM_001286993, intron 1 of 17) 406 NM_001286993 89846 Hs.411081 NM_033086 HPRD:10957 FGD3 ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding 0.028933 0.505415 225(AAGTGGCT,+,0.00) 322(GGCCTCGA,-,0.00) -94(CCCCCGCC,-,0.00) -64(GAATCAGCAAGC,+,0.00) 561_WT_peak_4247 chr2 109335621 109336445 + 195 NA promoter-TSS (NM_006267) promoter-TSS (NM_006267) 96 NM_006267 5903 Hs.199561 NM_006267 HPRD:03111 RANBP2 ADANE|ANE1|IIAE3|NUP358|TRP1|TRP2 RAN binding protein 2 protein-coding 0.109223 0.653333 -18(GGCGGCCGAA,+,0.00) -85(AAACGCTT,-,0.00) -42(TCTACGCC,+,0.00),375(GGCCTCGA,-,0.00) 469(CGGCTGGCGCAG,-,0.00) 387(GCCGGGCG,+,0.00) 271(CGGCGCGA,-,0.00) 71(CGTCGCCA,+,0.00) 368(GACCGACG,-,0.00) -164(TTTACACG,-,0.00) 561(GCTTCCTCTTTC,-,0.00) 486(TGGGCGGC,-,0.00) 129(CGCCGGCTGCGC,-,0.00),523(GGGGGGACAGCG,+,0.00),624(CCCTGGCCCGGG,-,0.00) 620(GCCGCCCTGGCC,+,0.00) 134(GCTGCGCCGC,+,0.00),134(GCTGCGCCGC,-,0.00) 561_WT_peak_5348 chr3 186500723 186502024 + 195 NA promoter-TSS (NM_001967) promoter-TSS (NM_001967) 12 NM_001967 1974 Hs.518475 NM_001967 HPRD:03062 EIF4A2 BM-010|DDX2B|EIF4A|EIF4F|eIF-4A-II|eIF4A-II eukaryotic translation initiation factor 4A2 protein-coding 0.087625 0.582949 189(GGAGCAGGGCGG,-,0.00) 127(GCCTCCGGCTCC,-,0.00),697(GGGCCCGGATTG,+,0.00) 93(CCCGGCCGCC,-,0.00) 1020(AGGCCGCT,+,0.00) -123(CGGACTTCCCGG,+,0.00) -44(ACGGTCGG,-,0.00),98(CCGCCCGA,+,0.00),392(CTGACCGA,+,0.00),483(TCAGTCGG,-,0.00) 148(CCCCCGGC,-,0.00) 100(GCCCGACG,-,0.00) -132(CCGGTAAA,+,0.00),202(CGGGGAAA,+,0.00),353(TTTATCCG,-,0.00) 128(CCTCCGGCTCCG,-,0.00) 139(GGCGCGGC,-,0.00) 201(GCGGGGAAAGCG,+,0.00) 141(CGCGGCTCCCCC,-,0.00),519(GGTGGCTCCGCG,-,0.00) 1064(GGGCGGAGTT,+,0.00) 957(GGCCACGGCGCG,-,0.00) 1098(GCTCCGCAGT,-,0.00) 1015(TCGCCAGGCCGC,-,0.00) 561_WT_peak_3184 chr17 40831667 40832148 + 195 NA exon (NM_016602, exon 2 of 2) exon (NM_016602, exon 2 of 2) 1938 NM_016602 2826 Hs.744542 NM_016602 CCR10 GPR2 chemokine (C-C motif) receptor 10 protein-coding 0.101871 0.711618 24(GCAGCAGGGCGA,-,0.00) -64(AAGCCGCT,+,0.00) -104(GGCGTAGA,-,0.00) 112(CCCCCTGGCGGC,-,0.00) -69(GGGCCAAGCCGC,-,0.00) 561_WT_peak_2510 chr15 64388106 64388577 + 195 NA exon (NM_148955, exon 1 of 13) exon (NM_148955, exon 1 of 13) 258 NM_003099 6642 Hs.188634 NM_003099 HPRD:03171 SNX1 HsT17379|VPS5 sorting nexin 1 protein-coding 0.091295 0.669492 5(GGAGCCGGAGTC,+,0.00) 23(GGCGGCCGGG,+,0.00) 16(CCGAGGGGGCGG,-,0.00) -55(GGCGTCGG,-,0.00) 271(TCCCGGCCCC,+,0.00) -74(GCCGCGGG,+,0.00),27(GCCGGGGG,+,0.00) -112(CGGCGCTA,+,0.00) 181(GGGCAGAGTGGG,-,0.00) 14(GTCCGAGG,-,0.00) 268(GCTTCCCGGC,-,0.00) 561_WT_peak_6064 chr5 180670579 180671191 + 194 NA promoter-TSS (NR_002591) promoter-TSS (NR_002591) 21 NM_006098 10399 Hs.5662 NM_006098 HPRD:01503 GNB2L1 Gnb2-rs1|H12.3|HLC-7|PIG21|RACK1 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 protein-coding 0.070261 0.566069 61(GGCGGCGA,-,0.00) 174(CCCCCGCC,-,0.00) 135(TCCTGCCG,+,0.00) 84(CAGCGACG,-,0.00) 52(AGTCATGGCGGC,-,0.00) 561_WT_peak_7584 chrX 77154587 77155181 + 194 NA promoter-TSS (NM_001866) promoter-TSS (NM_001866) -77 NM_001866 1349 Hs.522699 NM_001866 COX7B APLCC cytochrome c oxidase subunit VIIb protein-coding 0.042088 0.428571 -6(CTCGGCTGCC,-,0.00) -24(TCGGTCGA,-,0.00) -80(CTAAACCG,+,0.00),314(CAAAAGCG,+,0.00) 125(CGGGAAAA,+,0.00) 561_WT_peak_3881 chr19 52531402 52532185 + 194 NA promoter-TSS (NM_025040) promoter-TSS (NM_025040) -113 NM_025040 80110 Hs.292336 NM_025040 HPRD:15874 ZNF614 - zinc finger protein 614 protein-coding 0.062580 0.567602 -12(AAACGCTT,-,0.00) 524(GGCGGGGG,+,0.00) 484(CAAAACCA,+,0.00) 14(TGCGCGGA,-,0.00) 561_WT_peak_4598 chr20 30945480 30946282 + 194 NA promoter-TSS (NM_001164603) promoter-TSS (NM_001164603) -266 NM_001164603 171023 Hs.374043 NM_015338 HPRD:16516 ASXL1 BOPS|MDS additional sex combs like transcriptional regulator 1 protein-coding 0.076060 0.615193 472(TCCCCCTCCTCA,+,0.00) -144(AGCGGCCT,-,0.00) 331(CCGGGCACGCCG,-,0.00),555(TCGCCCTCCCGC,+,0.00),601(GCGGGAAAGCGG,-,0.00) 532(GGCGCCGA,-,0.00) 149(GCCGGGGG,+,0.00) 167(CCGCCCCTTCCC,-,0.00) 572(CGTCGGTC,+,0.00) 313(GAGAGCGGAAGG,+,0.00),531(GGGCGCCGAAGG,+,0.00) 560(CTCCCGCCCCGC,-,0.00) 292(CTAGGCGG,+,0.00) 172(CCTTCCCAGC,-,0.00) 561_WT_peak_5061 chr3 39093437 39093885 + 194 NA intron (NM_020839, intron 1 of 18) CpG 154 NM_020839 57599 Hs.109778 NM_020839 HPRD:11146 WDR48 P80|SPG60|UAF1 WD repeat domain 48 protein-coding 0.091518 0.692650 -124(AGCCACCT,-,0.00),58(AGCGGCAT,-,0.00),118(AACGGCTT,-,0.00) -9(CGGACGCG,-,0.00) 167(AGGCCCGGGA,-,0.00) 134(GGCGGGGG,+,0.00) 39(CGCCACGA,-,0.00) 111(CGGCGCTA,+,0.00) -106(CGTCGGAG,+,0.00) 82(GGCGCGGC,-,0.00),183(TGGGCGGC,-,0.00) 83(GCGCGGCCGGCC,+,0.00) 561_WT_peak_5977 chr5 145826896 145827452 + 194 NA intron (NM_006706, intron 1 of 21) CpG 301 NM_006706 10915 Hs.443465 NM_006706 HPRD:10393 TCERG1 CA150|TAF2S|Urn1 transcription elongation regulator 1 protein-coding 0.093525 0.682226 235(CTCGGCCGAC,-,0.00) -36(AGACGCTA,-,0.00),65(AGGTGGCT,+,0.00) 150(TCGCCGCC,+,0.00),293(TCGACGTC,+,0.00),356(TCCACGCC,+,0.00) 25(CGGGCCGGGA,-,0.00) 14(GCCGGGCG,+,0.00),180(GCCGGGCG,+,0.00) 374(CTTTGGGCTCCC,-,0.00) 184(GGCGCGGT,-,0.00) -134(GCGGGGACGGGG,+,0.00),82(GCCGGGCCCGGG,+,0.00),93(GCTGGGCCAGGG,+,0.00),256(CCCAGGCCGCGC,-,0.00) 8(AGCGGAGCCGGG,+,0.00) -163(AACGCGGCCC,-,0.00),-82(AACGCTGCCC,-,0.00) -138(CGTGGCGG,+,0.00),232(CGTCTCGG,+,0.00) 147(GCCTCGCCGC,-,0.00),266(GCTCCGCTGC,-,0.00) 561_WT_peak_6007 chr5 159546112 159546526 + 194 NA exon (NM_001267035, exon 1 of 3) exon (NM_001267035, exon 1 of 3) 133 NM_001130864 114825 Hs.744960 NM_052927 ENSG00000170234 PWWP2A MST101 PWWP domain containing 2A protein-coding 0.108696 0.720482 133(TCTCCCTCCTCC,+,0.00) 108(CACGGCCGCC,-,0.00) -24(AGACGCTT,-,0.00) 64(CCCCCCTCCCCG,+,0.00),65(CCCCCTCCCCGG,+,0.00),199(CCTCCCTCCCGC,+,0.00) 163(GGCGGCGA,-,0.00) -109(CCCCCGGC,-,0.00) 219(TCGTCCCG,+,0.00) -73(CGTCGGCC,+,0.00) 193(CCTTCCCCTCCC,-,0.00) 56(CGCCGGCGCCCC,-,0.00),158(GCGGCGGCGGCG,+,0.00),164(GCGGCGACAGCG,+,0.00) 103(GCAGCCACGGCC,+,0.00) 561_WT_peak_4304 chr2 133036559 133036745 + 194 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA -21110 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo 0.016129 0.470588 -53(AGGGTAAA,+,0.00) 561_WT_peak_3168 chr17 38264375 38264748 + 194 NA Intergenic Intergenic -7583 NM_021724 9572 Hs.724 NM_021724 HPRD:03873 NR1D1 EAR1|THRA1|THRAL|ear-1|hRev nuclear receptor subfamily 1, group D, member 1 protein-coding 0.061662 0.639037 131(GGGAAGGCGCTC,-,0.00) -40(TTGTGCCG,+,0.00),-34(CGGCTCGA,-,0.00) -62(CGGAGGAAGGGG,+,0.00) -83(GCCTCCTGTTTC,-,0.00) -19(GCGGGCTGCCGG,+,0.00),54(CAGCCCGGCTGC,-,0.00) 561_WT_peak_6466 chr6 128293053 128293707 + 193 NA intron (NM_001291981, intron 32 of 32) intron (NM_001291981, intron 32 of 32) -53604 NM_001164687 387357 Hs.661756 NM_001010923 HPRD:16662 THEMIS C6orf190|C6orf207|GASP|SPOT|TSEPA|bA325O24.3|bA325O24.4 thymocyte selection associated protein-coding 0.009174 0.419847 -91(CAAAACCA,+,0.00) 561_WT_peak_6415 chr6 106094434 106094761 + 193 NA Intergenic Intergenic -243598 NM_002726 5550 Hs.436564 NM_002726 HPRD:02673 PREP PE|PEP prolyl endopeptidase protein-coding 0.003058 0.408537 561_WT_peak_4946 chr22 42335951 42336772 + 193 NA promoter-TSS (NM_001110215) promoter-TSS (NM_001110215) -138 NM_001110215 79019 Hs.208912 NM_024053 HPRD:12798 CENPM C22orf18|CENP-M|PANE1|bK250D10.2 centromere protein M protein-coding 0.017052 0.543796 524(CTCGGCCTCC,-,0.00) 236(TTTACCCC,-,0.00) 52(CACTCGGCCC,-,0.00) 424(GCCACCATGCCC,+,0.00) 98(GTGGCCTGCCTG,+,0.00) 561_WT_peak_3264 chr17 56409499 56409952 + 193 NA intron (NR_038413, intron 1 of 3) intron (NR_038413, intron 1 of 3) -1046 NR_029683 406934 NR_029683 miRBase:MI0000458 MIR142 MIRN142 microRNA 142 ncRNA 0.044150 0.645374 -62(CAGCCCTCCTCC,+,0.00) 64(TCGACACC,+,0.00) -136(AGGCTGGCGCCC,-,0.00) 235(AGGGCAGGGC,-,0.00) -145(CGGAGGAAGAGG,+,0.00) -39(TTTCCCCG,-,0.00) 122(GCTGAGGAGC,+,0.00) 561_WT_peak_4376 chr2 178076656 178077154 + 193 NA promoter-TSS (NM_194247) promoter-TSS (NM_194247) -517 NM_194247 220988 Hs.516539 NM_194247 ENSG00000170144 HNRNPA3 2610510D13Rik|D10S102|FBRNP|HNRPA3 heterogeneous nuclear ribonucleoprotein A3 protein-coding 0.034137 0.470942 301(AGAGGCCT,-,0.00) 195(GTCCGAGG,-,0.00) -162(CAAACAGGTAGC,+,0.00),180(GAAACAGGAAAG,+,0.00) 138(CAGGCAGGCGGC,-,0.00) 561_WT_peak_5399 chr4 2964749 2965364 + 193 NA promoter-TSS (NM_001004056) promoter-TSS (NM_001004056) 177 NM_001291978 8602 Hs.627133 NM_003703 HPRD:12827 NOP14 C4orf9|NOL14|RES425|UTP2 NOP14 nucleolar protein protein-coding 0.134959 0.704545 -92(CCTTCCGGCTCC,-,0.00),86(CGCCCCGGAGGC,+,0.00) -125(GCCGGCCGAG,+,0.00) 217(AACCGCTT,-,0.00),312(AGCGACTA,-,0.00),429(AAGCCGTT,+,0.00) 401(GGCGGCGA,-,0.00) -48(CGTGCGCG,-,0.00) -124(CCGGCCGA,+,0.00) -18(TCGTGGCG,+,0.00),201(ACGTGCCG,+,0.00) 436(TAGCGCCG,-,0.00) -26(GTCCCACG,-,0.00) -91(CTTCCGGCTCCC,-,0.00) 274(ACCGCGCC,+,0.00) 80(CGCCGGCGCCCC,-,0.00),136(CGCGCGCCCCGC,-,0.00) 212(CGCGGAACCGCT,+,0.00) -139(CCGAGAAG,-,0.00),254(CCGACTCG,-,0.00) 126(TTCGCCATGGCG,+,0.00),128(CGCCATGGCGCG,-,0.00),395(GGCCGCGGCGGC,-,0.00) 141(GCCCCGCTGC,-,0.00) 203(GTGCCGGGCCGC,-,0.00) 561_WT_peak_1031 chr10 70848518 70848925 + 193 NA intron (NR_036430, intron 1 of 1) intron (NR_036430, intron 1 of 1) 893 NR_036430 5552 Hs.1908 NM_002727 HPRD:01513 SRGN PPG|PRG|PRG1 serglycin protein-coding 0.014742 0.357843 209(AAGCGACT,+,0.00),210(AGCGACTT,-,0.00) 561_WT_peak_3307 chr17 62982079 62982547 + 193 NA Intergenic Intergenic -10610 NR_026903 201283 Hs.396447 NM_153032 HPRD:08720 AMZ2P1 - archaelysin family metallopeptidase 2 pseudogene 1 pseudo 0.019231 0.520256 -52(AAGTGTCT,+,0.00) -148(TCGGTCTG,-,0.00) -133(CGGTTTTT,-,0.00) -60(GAAAGAGGAAGT,+,0.00) 561_WT_peak_4730 chr20 62694289 62694518 + 192 NA 5' UTR (NM_003195, exon 1 of 10) 5' UTR (NM_003195, exon 1 of 10) 393 NM_003195 6919 Hs.505004 NM_003195 HPRD:16069 TCEA2 TFIIS transcription elongation factor A (SII), 2 protein-coding 0.144105 0.743478 -114(CCTCCCTCGCGG,+,0.00) -79(TGGCGACG,-,0.00) 1(GGCGCGGC,-,0.00),10(GGCGCGGC,-,0.00) 2(GCGCGGCGGGCG,+,0.00) 53(CGCGCGGCCGCG,+,0.00) 561_WT_peak_4642 chr20 42694487 42694768 + 192 NA exon (NM_001098797, exon 7 of 9) exon (NM_001098797, exon 7 of 9) 120091 NM_001098798 84969 Hs.26608 NM_032883 HPRD:12734 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding 0.039146 0.702128 -122(AAGTCTCT,+,0.00) -79(CCTCCTTCCCGC,+,0.00) -72(CCCGCTCAGCCC,+,0.00) -26(GCCCAGGGCGCC,-,0.00) -114(GCTGCCAGGC,+,0.00),16(GCCCCCCAGC,-,0.00) -113(CTGCCAGGCCTC,-,0.00) 561_WT_peak_1714 chr12 54069491 54070094 + 192 NA intron (NM_001002031, intron 1 of 4) CpG 317 NM_005176 517 Hs.524464 NM_005176 HPRD:04429 ATP5G2 ATP5A ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) protein-coding 0.067993 0.617550 139(CGCGTGCG,+,0.00) 15(CGGCACGC,-,0.00) 114(TCCGCGCA,+,0.00),143(TGCGCAGC,-,0.00) 211(GGCGGAGCAGCG,+,0.00) -14(GGCGCCAGGCCC,+,0.00) 561_WT_peak_7203 chr9 4678760 4679768 + 192 NA promoter-TSS (NM_017913) promoter-TSS (NM_017913) 216 NR_121597 101929351 Hs.745404 NR_121597 CDC37L1-AS1 - CDC37L1 antisense RNA 1 (head to head) ncRNA 0.056548 0.510406 290(CCTCCCTCCGCC,+,0.00) -148(AAGCGACT,+,0.00),-147(AGCGACTT,-,0.00) 695(GGCGTCGC,-,0.00) 736(CCCCCGGC,-,0.00) 169(CCGTGCCG,+,0.00) 653(GTCCGCCG,-,0.00) 108(CATACAGGAAGC,+,0.00),541(GAAACAGGAATA,+,0.00) 629(ACCGCGCC,+,0.00) 603(AGCCCCGCCC,-,0.00) 697(CGTCGCGG,+,0.00) 696(GCGTCGCGGC,-,0.00) 405(CGGCCAGGACCC,-,0.00) 561_WT_peak_6537 chr6 159074421 159074889 + 192 NA intron (NM_001242395, intron 2 of 15) intron (NM_001242395, intron 2 of 15) 3609 NM_001242394 94120 Hs.436977 NM_001009991 HPRD:15462 SYTL3 SLP3 synaptotagmin-like 3 protein-coding 0.038462 0.507463 1(CAGGTAAA,+,0.00) -122(GGGAGGCGGAGG,+,0.00) -160(CTACTCGG,+,0.00) 561_WT_peak_1135 chr10 104262546 104262954 + 192 NA promoter-TSS (NM_005736) promoter-TSS (NM_005736) -238 NM_005736 10121 Hs.153961 NM_005736 HPRD:05507 ACTR1A ARP1|CTRN1 ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) protein-coding 0.029412 0.459658 67(CGGTTTGG,-,0.00) -85(TGCGCAGT,-,0.00) -119(CCGCCTAG,-,0.00) 561_WT_peak_244 chr1 53308329 53308692 + 192 NA 5' UTR (NM_001004339, exon 1 of 14) 5' UTR (NM_001004339, exon 1 of 14) 327 NM_001004339 440590 Hs.658458 NM_001004339 HPRD:17399 ZYG11A ZYG11 zyg-11 family member A, cell cycle regulator protein-coding 0.137741 0.736264 11(GGCTCCGGCTCG,-,0.00) 20(TCGACGCC,+,0.00),38(TTGACGCC,+,0.00),170(GGCGGCGA,-,0.00),186(TCGGCGCC,+,0.00) -114(CGCGTGCG,+,0.00),-112(CGTGCGCG,-,0.00) 16(CGGCTCGA,-,0.00) -65(CGGCGCTA,+,0.00) -69(GGCGCGGC,-,0.00) 175(CGACGCGG,+,0.00) -48(GCCTCGCAGG,-,0.00),43(GCCCCGCCGC,-,0.00),171(GCGGCGACGC,+,0.00) -28(GCGTCCTGGCAG,+,0.00) 561_WT_peak_7597 chrX 102941335 102941644 + 192 NA promoter-TSS (NR_038978) promoter-TSS (NR_038978) 257 NM_001142429 9643 Hs.326387 NM_012286 HPRD:02326 MORF4L2 MORFL2|MRGX mortality factor 4 like 2 protein-coding 0.048544 0.493548 -31(CTGACCGA,+,0.00) 3(TATACCCG,-,0.00) 561_WT_peak_5997 chr5 156971580 156971869 + 192 NA intron (NM_033274, intron 3 of 22) intron (NM_033274, intron 3 of 22) 31107 NM_033274 8728 Hs.483944 NM_023038 HPRD:04704 ADAM19 MADDAM|MLTNB ADAM metallopeptidase domain 19 protein-coding 0.017301 0.413793 -9(CGGGGAAA,+,0.00) 561_WT_peak_1275 chr11 47574730 47575091 + 192 NA promoter-TSS (NM_006560) promoter-TSS (NM_006560) -118 NM_006560 10658 Hs.595333 NM_006560 HPRD:03046 CELF1 BRUNOL2|CUG-BP|CUGBP|CUGBP1|EDEN-BP|NAB50|NAPOR|hNab50 CUGBP, Elav-like family member 1 protein-coding 0.088643 0.671271 -161(GGAGGAGGGGGA,-,0.00) 95(TCGACTCC,+,0.00) -83(AGGGGCGGGC,-,0.00) -68(GCCGGGCG,+,0.00),-4(GCCGCGGG,+,0.00) 20(GGGAGCTGCAGG,+,0.00) -149(GCGCGGCGAGGG,+,0.00),-79(GCGGGCCGAGCG,+,0.00),-11(CCCTGGGGCCGC,-,0.00) -125(CGCGGCGCCGCC,+,0.00),-125(CGCGGCGCCGCC,-,0.00) -122(GGCGCCGCCC,-,0.00),1(GGGCGGAGCC,+,0.00),97(GACTCCGCCC,-,0.00) 561_WT_peak_6533 chr6 157956922 157957337 + 192 NA intron (NM_153746, intron 1 of 8) intron (NM_153746, intron 1 of 8) 6965 NR_037463 100500899 NR_037463 MIR3692 - microRNA 3692 ncRNA 0.007229 0.370192 150(CAGCAAGGCCAC,-,0.00) 561_WT_peak_7029 chr8 59714028 59714286 + 192 NA Intergenic Intergenic -141753 NM_003580 8439 Hs.372000 NM_003580 HPRD:09117 NSMAF FAN neutral sphingomyelinase (N-SMase) activation associated factor protein-coding 0.011628 0.463320 -47(CAAAACCA,+,0.00) 561_WT_peak_473 chr1 148247561 148248402 + 191 NA intron (NR_102404, intron 6 of 18).2 CpG -45445 NM_001164261 645142 Hs.730589 NM_001164261 ENSG00000256374 PPIAL4D - peptidylprolyl isomerase A (cyclophilin A)-like 4D protein-coding 0.060642 0.595012 4(AAGCGACT,+,0.00),113(AGGCGGCT,+,0.00),542(AGCCACTA,-,0.00) 570(AAGGGCCAGCCC,+,0.00) 413(CGCGTTCG,+,0.00) -70(TCCCTGCCCT,+,0.00) 304(GCCGGGCG,+,0.00) 120(TCGGGCCG,+,0.00),300(TCCTGCCG,+,0.00) 12(GGGCAGGGAGGG,-,0.00) 235(GTCCAACG,-,0.00) 1(CAAAAGCG,+,0.00) 172(GGGCAGGGCGGG,-,0.00) -14(GCTCCGCAGC,-,0.00) 561_WT_peak_1565 chr12 7052893 7053488 + 191 NA promoter-TSS (NM_138425) promoter-TSS (NM_138425) -13 NM_138425 113246 Hs.405913 NM_138425 HPRD:13609 C12orf57 C10|GRCC10|TEMTYS chromosome 12 open reading frame 57 protein-coding 0.050420 0.535235 111(TGCGCCGGATGC,+,0.00) 391(GTCCGCCG,-,0.00) -32(TTTACCGG,-,0.00),397(CGGGAAAA,+,0.00) 129(CTTTCCGCTCCC,-,0.00) 235(CCGCCTCG,-,0.00) 561_WT_peak_4631 chr20 37063510 37064123 + 191 NA non-coding (NR_027241, exon 1 of 7) non-coding (NR_027241, exon 1 of 7) 146 NR_015366 388796 Hs.400876 NR_015366 ENSG00000196756 SNHG17 - small nucleolar RNA host gene 17 (non-protein coding) ncRNA 0.101142 0.664495 186(GGCGGCGGAG,+,0.00) 93(CCGCCTTCCCCG,+,0.00) 176(GGCGTCGA,-,0.00),427(TCAACGCC,+,0.00) 329(TCGCGCCG,+,0.00) -60(GTCTGACG,-,0.00) -74(TGCGCGGA,-,0.00) -73(GCGCGGACAGGG,+,0.00) 168(GGCGCCCTGGCG,+,0.00),170(CGCCCTGGCGTC,-,0.00) 561_WT_peak_3589 chr19 5680449 5680814 + 191 NA promoter-TSS (NM_198533) promoter-TSS (NM_198533) -145 NM_198533 374875 Hs.631840 NM_198533 HPRD:18022 HSD11B1L 11-DH3|11-beta-HSD3|HSD3|SCDR10|SCDR10B|SDR26C2 hydroxysteroid (11-beta) dehydrogenase 1-like protein-coding 0.098630 0.672131 -83(CTCGCCCGCC,-,0.00) -53(AGAGGCCT,-,0.00),-51(AGGCCTCT,+,0.00) -113(TCGCTCGG,-,0.00) 80(AGGCCCGGGC,-,0.00),171(GCCCGGCCCT,+,0.00) -24(GCCCGACG,-,0.00) -164(CCTCCGGCGCCC,-,0.00) -73(GCTTCCTGTCGC,-,0.00) -64(CGCGGCGCCGCA,+,0.00),-64(CGCGGCGCCGCA,-,0.00),143(CGCGGAGCCTCC,+,0.00) -123(GCCACCATGGTC,+,0.00) 141(GCCGCGGAGC,+,0.00) 561_WT_peak_3636 chr19 12845264 12845663 + 191 NA promoter-TSS (NM_024038) promoter-TSS (NM_024038) 66 NM_024038 79002 Hs.515155 NM_024038 HPRD:14528 C19orf43 fSAP18 chromosome 19 open reading frame 43 protein-coding 0.132832 0.737500 -9(GGGCCCGGAGCC,+,0.00) 78(AGGCCGCT,+,0.00) 72(CCGGGAAGGCCG,-,0.00) -120(CCGCCCGA,+,0.00) 3(TCCCGGCCCT,+,0.00) 115(TCGTCCCG,+,0.00) -50(CCGACTCAGCCC,+,0.00) -40(CCAACGGCTCCC,-,0.00) 57(GCCGCGCA,+,0.00) -13(CGCGGGGCCCGG,-,0.00),-12(GCGGGGCCCGGA,+,0.00),84(CTCCGGCCCCGC,-,0.00),168(GCGGGGGCGGGG,+,0.00),205(GCGGGGCTAGGG,+,0.00) 15(GGCTCCGCCC,-,0.00),203(GGGCGGGGCT,+,0.00) 105(CCGACTCG,-,0.00) 561_WT_peak_7239 chr9 32552184 32552728 + 191 NA non-coding (NR_033992, exon 2 of 3) non-coding (NR_033992, exon 2 of 3) 170 NM_001195622 10210 Hs.589962 NM_005802 HPRD:11642 TOPORS LUN|P53BP3|RP31|TP53BPL topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase protein-coding 0.071691 0.576147 138(CGGGGATCGCGG,-,0.00) 257(TCGACTCC,+,0.00) -35(GGGCGGGCGCTC,-,0.00) -50(CTGCACGA,-,0.00),-25(TCGTGCCC,+,0.00) 263(CCGCCTCTTCCT,-,0.00),290(CCGCTTCTTACG,-,0.00) 100(CGTCGCAC,+,0.00) -18(CGGCTAAA,+,0.00),316(TGTACCCG,-,0.00) 168(CACTGGGCCCGC,-,0.00) 4(GCCTGGCAGC,-,0.00) 561_WT_peak_5888 chr5 122758949 122759810 + 191 NA promoter-TSS (NM_001166226) promoter-TSS (NM_001166226) -93 NM_153223 153241 Hs.483209 NM_153223 HPRD:08769 CEP120 CCDC100 centrosomal protein 120kDa protein-coding 0.056911 0.502320 -123(TAGCCGCT,+,0.00),-122(AGCCGCTT,-,0.00),171(AAACGCTT,-,0.00) 581(CAAAACCA,+,0.00) 30(GCTTCGCCTCCC,-,0.00) -83(GCCGCGCC,+,0.00),147(GCTGCGCA,+,0.00) -69(CCGCCTAG,-,0.00) -108(CGCCCGGGCGGC,-,0.00) 185(GCTGCGTAGC,+,0.00) 561_WT_peak_2912 chr16 75681312 75682510 + 191 NA promoter-TSS (NM_001130089) promoter-TSS (NM_001130089) 276 NM_018975 54386 Hs.301419 NM_018975 HPRD:05452 TERF2IP DRIP5|RAP1 telomeric repeat binding factor 2, interacting protein protein-coding 0.099332 0.670559 764(TCGCCCAGCTCC,+,0.00) 626(GACACCGGCTCG,-,0.00),631(CGGCTCGGAAGC,+,0.00),949(GGACCCGGAGGC,+,0.00) 38(CTCGGCCGCC,-,0.00),50(CACGGCCGCC,-,0.00) 215(AGGCGTCT,+,0.00) 43(CCGCCTGCACGG,+,0.00),58(CCATCTTCCCGG,+,0.00),504(CCGGGGAGGCGC,-,0.00),705(TCGCCTTCACGG,+,0.00) 431(TCGACGCT,+,0.00) 151(GGGCGGGCACTC,-,0.00) 75(CCGACCCA,+,0.00) 695(GCCGGGCG,+,0.00) -104(CGGCAAGA,-,0.00),689(CGGCACGC,-,0.00) 130(CCACCTCTTCCG,-,0.00) 297(CGTCAGAC,+,0.00),621(CGGCGGAC,+,0.00) 182(GCTGCGCA,+,0.00),1009(TGCGCGGG,-,0.00) 492(TGCTGGCCCAGC,-,0.00),671(GCGGAGCCGGAG,+,0.00),761(CGCTCGCCCAGC,-,0.00),868(GCGGGGCCAGGA,+,0.00) 670(CGCGGAGCCGGA,+,0.00),989(CGCGGGGCCTCG,+,0.00) 204(CTTCGCGG,+,0.00),612(CCGCCTCG,-,0.00) 650(GGGGCCCTGGCC,+,0.00) -58(GCTTCCCAGC,-,0.00),119(GGTGCGAAGC,+,0.00),203(GCTTCGCGGC,-,0.00),668(GCCGCGGAGC,+,0.00) 561_WT_peak_136 chr1 28099213 28099899 + 191 NA promoter-TSS (NM_177424) promoter-TSS (NM_177424) -138 NM_177424 23673 Hs.523855 NM_177424 HPRD:06059 STX12 STX13|STX14 syntaxin 12 protein-coding 0.053936 0.566230 -32(GGTTCCGGGTCT,-,0.00) -105(AAGTGGTT,+,0.00),385(TGGCGGCT,+,0.00) 330(GCTCCTTCCCCG,+,0.00) 284(CGCGTGCG,+,0.00),286(CGTGCGCG,-,0.00) 169(TCCCCGCCCT,+,0.00),301(AGGGCGGGGC,-,0.00),336(TCCCCGCCCT,+,0.00) 388(CGGCTGCTTCCG,-,0.00) 139(CAATCTCAGCCC,+,0.00) 370(CCTGCGGGTCCC,-,0.00) 248(GCGGCGCCTGCG,+,0.00) 302(GGGCGGGGCT,+,0.00) 375(GGGTCCCGGCTG,+,0.00) 561_WT_peak_3155 chr17 37607272 37608011 + 191 NA promoter-TSS (NM_004774) promoter-TSS (NM_004774) -114 NM_004774 5469 Hs.643754 NM_004774 HPRD:05055 MED1 CRSP1|CRSP200|DRIP205|DRIP230|PBP|PPARBP|PPARGBP|RB18A|TRAP220|TRIP2 mediator complex subunit 1 protein-coding 0.062246 0.533784 258(GCTTTCGGCTCC,-,0.00) -1(CCGGGAAGGATC,-,0.00),460(CCGCCTCCCGGG,+,0.00) 47(TCGAGGCC,+,0.00),132(GGCATCGA,-,0.00) 27(CGGCAAGA,-,0.00),224(TCGCGCCG,+,0.00),433(TGGCACGA,-,0.00) 549(TAGAGACG,-,0.00) 163(CGTCGGCC,+,0.00) 259(CTTTCGGCTCCC,-,0.00),457(CCTCCGCCTCCC,-,0.00) 499(CCGAGTAG,-,0.00) 561_WT_peak_1648 chr12 32049522 32049946 + 191 NA Intergenic Intergenic -62619 NM_018169 55196 Hs.445129 NM_018169 HPRD:07691 KIAA1551 C12orf35 KIAA1551 protein-coding 0.009434 0.411765 -98(AGGGCGGGGA,-,0.00),-47(AGGGCAGGAA,-,0.00) 40(TGGTTTTG,-,0.00) 561_WT_peak_33 chr1 6614356 6614739 + 191 NA promoter-TSS (NM_138697) promoter-TSS (NM_138697) 111 NM_024654 79707 Hs.59425 NM_024654 HPRD:08667 NOL9 Grc3|NET6 nucleolar protein 9 protein-coding 0.112272 0.723958 128(GCCTCCGAGCCG,-,0.00) -51(GGCGGCTGAG,+,0.00) -139(TCCACGCC,+,0.00) -103(CGTAGGCG,-,0.00) -92(CCGACCGC,+,0.00),88(TCGGTCCG,-,0.00) 2(CGGCAGGA,-,0.00) -135(CGCCGGAC,+,0.00),86(CGTCGGTC,+,0.00) -59(GCGGGGCCGGCG,+,0.00) -62(GCGGCGGGGC,+,0.00),95(GCCCCGCTGC,-,0.00) 561_WT_peak_5028 chr3 17193109 17193691 + 191 NA Intergenic Intergenic 218712 NR_037465 100500913 NR_037465 miRBase:MI0016135 MIR3714 - microRNA 3714 ncRNA 0.020619 0.584906 374(GCCCCCATGGGG,+,0.00) 561_WT_peak_7433 chr9 130213374 130214021 + 191 NA promoter-TSS (NM_001005373) promoter-TSS (NM_001005373) 14 NM_000976 6136 Hs.408054 NM_000976 HPRD:01603 RPL12 L12 ribosomal protein L12 protein-coding 0.085008 0.634259 118(TTGGCCTCCTCC,+,0.00) 82(GAACCCGGATTC,+,0.00),129(CGAGCCGAAAGC,+,0.00) -75(AGCGGCTT,-,0.00),64(AGGCGGCT,+,0.00) 38(GGGGTCGA,-,0.00) 97(ACGACCGA,+,0.00) 377(TCCCAGCCCT,+,0.00) 93(CGGGACGA,-,0.00) -101(CAACACCG,+,0.00) -54(CGGGGAAA,+,0.00) 447(AGCCCCGCCC,-,0.00) -114(GGCCGGGGCGGC,-,0.00) 561_WT_peak_889 chr10 13343960 13344551 + 191 NA Intergenic CpG -2125 NM_006214 5264 Hs.498732 NM_006214 HPRD:03609 PHYH LN1|LNAP1|PAHX|PHYH1|RD phytanoyl-CoA 2-hydroxylase protein-coding 0.052453 0.555743 160(GGACCCGGGATC,+,0.00) 364(CCGGCGAGGCGG,-,0.00) 48(CCTTCCTGTTTG,-,0.00) 368(CGAGGCGG,+,0.00) 561_WT_peak_103 chr1 24151543 24152073 + 191 NA intron (NM_001166059, intron 1 of 6) intron (NM_001166059, intron 1 of 6) 141 NM_000191 3155 Hs.533444 NM_000191 HPRD:02003 HMGCL HL 3-hydroxymethyl-3-methylglutaryl-CoA lyase protein-coding 0.067925 0.666667 214(CCCGCGGC,-,0.00),274(CCCCCGCC,-,0.00) 326(CCGTTTTG,-,0.00) 262(GGCGCGGC,-,0.00) 269(CCCCGCCCCCGC,-,0.00) 264(CGCGGCCCCGCC,-,0.00) 262(GGCGCGGCCC,-,0.00) 113(CCGCCTCG,-,0.00) 226(CAGCTGGGCCCC,-,0.00) 561_WT_peak_3553 chr19 893335 893658 + 191 NA promoter-TSS (NM_005481) promoter-TSS (NM_005481) 12 NR_125730 103625684 NR_125730 RNU6-2 U6-2 RNA, U6 small nuclear 2 snRNA 0.034056 0.422840 561_WT_peak_2323 chr14 90849078 90849601 + 191 NA Intergenic CpG -13988 NM_006888 801 Hs.282410 NM_006888 HPRD:00241 CALM1 CALML2|CAMI|CPVT4|DD132|PHKD|caM calmodulin 1 (phosphorylase kinase, delta) protein-coding 0.072658 0.582061 45(AAGCGGTT,+,0.00) -137(CAAAAACG,+,0.00) -112(ACCGCGCA,+,0.00) 295(GGCGGAGCCGCT,+,0.00) 234(CCGCCAAG,-,0.00) 233(GCCGCCAAGACC,+,0.00) 561_WT_peak_7342 chr9 93955946 93956645 + 191 NA Intergenic CpG -118881 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA 0.071531 0.564286 -26(AGCGGCTT,-,0.00) 178(GCGGTCGG,-,0.00),418(TCGGACGG,-,0.00) 444(CCGCTTCCTCCC,-,0.00) 416(CTTCGGAC,+,0.00) -72(GGGTTTTG,-,0.00) 66(GGGACCCGCAGG,+,0.00) 21(GCCGCGCA,+,0.00) -59(CGCGGTGGCGCG,+,0.00) 561_WT_peak_1262 chr11 43702350 43702679 + 191 NA exon (NM_016142, exon 1 of 11) exon (NM_016142, exon 1 of 11) 371 NM_016142 51144 Hs.132513 NM_016142 HPRD:09989 HSD17B12 KAR|SDR12C1 hydroxysteroid (17-beta) dehydrogenase 12 protein-coding 0.091185 0.696970 -39(CCCTCCGGGTCT,-,0.00) -42(CGGCCCTCCGGG,+,0.00) -57(CGTACTCG,-,0.00) -100(TGGGTCGG,-,0.00) -11(GGCGGGGG,+,0.00),54(CCCGCGGC,-,0.00) 113(CCTTCCCCTCCC,-,0.00) -128(CGCTCTCCCCGC,-,0.00) 561_WT_peak_1261 chr11 43665548 43665966 + 191 NA Intergenic Intergenic -36386 NM_016142 51144 Hs.132513 NM_016142 HPRD:09989 HSD17B12 KAR|SDR12C1 hydroxysteroid (17-beta) dehydrogenase 12 protein-coding 0.052632 0.570406 -140(AGGCGGCT,+,0.00) -26(GCTCGCCAGCCC,+,0.00) 40(GCCGCGGG,+,0.00) 78(TCTTGCCG,+,0.00) 7(GCGGCGGCGC,+,0.00) 561_WT_peak_2086 chr13 99852632 99852975 + 191 NA promoter-TSS (NM_177967) promoter-TSS (NM_177967) 124 NM_001144072 337867 Hs.508545 NM_177967 ENSG00000134882 UBAC2 PHGDHL1 UBA domain containing 2 protein-coding 0.087464 0.651163 -69(GGCGTCCA,-,0.00) 146(CCTACCGA,+,0.00) -73(GCCGGGCG,+,0.00) 169(CGGCAGGA,-,0.00) 148(TACCGACG,-,0.00) 102(CGGTTCTG,-,0.00) -1(GGCCATCGCGGA,-,0.00) 561_WT_peak_1156 chr10 121028304 121029207 + 191 NA intron (NM_005308, intron 1 of 15) LTR84b|LTR|ERVL 61558 NM_005308 2869 Hs.524625 NM_005308 HPRD:02926 GRK5 GPRK5 G protein-coupled receptor kinase 5 protein-coding 0.016611 0.525442 17(GGGCCCAGAGGG,-,0.00) 51(GCTTCCTGTCAC,-,0.00),160(GCTTTCTGTTTG,-,0.00) 561_WT_peak_2236 chr14 60558480 60558904 + 190 NA promoter-TSS (NM_022495) promoter-TSS (NM_022495) 63 NM_022495 64430 Hs.509499 NM_022495 HPRD:16604 PCNXL4 C14orf135|FBP2 pecanex-like 4 (Drosophila) protein-coding 0.099057 0.649412 236(GGCGCCGA,-,0.00) 133(CGCGAACG,+,0.00),253(CGAACGCG,-,0.00) -104(CTGGTAAA,+,0.00),39(TTTCCCCG,-,0.00) 185(GGCAGGGCCCGC,-,0.00),223(GCGAGGCCAGCC,+,0.00) 30(CGTCTCGG,+,0.00),193(CCGCCTCG,-,0.00) 220(GCAGCGAGGC,+,0.00) 230(CAGCCAGGCGCC,-,0.00) 561_WT_peak_1268 chr11 46639114 46639549 + 190 NA promoter-TSS (NM_173811) promoter-TSS (NM_173811) 505 NM_001142673 9776 Hs.127403 NM_014741 HPRD:13809 ATG13 KIAA0652|PARATARG8 autophagy related 13 protein-coding 0.085057 0.623853 -164(AAGCGGAT,+,0.00),25(AGGTGTCT,+,0.00) 198(CAGCGCCCCCGG,+,0.00) -63(GAGCGCCAGTCG,+,0.00) 41(CGTGTACG,+,0.00) 144(TTGTGCCG,+,0.00) 87(GGCGCGGC,-,0.00) -131(GCCGGGAAGC,+,0.00),58(GCTCCGGAGC,+,0.00),58(GCTCCGGAGC,-,0.00),154(GCTTCGCAGG,-,0.00) 1(GAGCCAGGACCC,-,0.00),78(CAGCCAGGAGGC,-,0.00) 561_WT_peak_6879 chr7 143532972 143533734 + 190 NA intron (NR_015421, intron 1 of 2) intron (NR_015421, intron 1 of 2) 457 NR_015421 154761 Hs.716689 NR_015421 ENSG00000253882 LOC154761 - family with sequence similarity 115, member C pseudogene pseudo 0.035433 0.505898 209(AAGCGACG,-,0.00) 561_WT_peak_57 chr1 11072707 11073070 + 190 NA intron (NM_007375, intron 1 of 5) CpG 209 NM_007375 23435 Hs.300624 NM_007375 TARDBP ALS10|TDP-43 TAR DNA binding protein protein-coding 0.123967 0.728022 -83(AGCGGCCT,-,0.00),6(AGCGGCTT,-,0.00) 25(CCGGGAAGTCAG,-,0.00),100(CGGGGAGGCCGG,-,0.00) 113(GGCGCCGA,-,0.00) 67(GGGCTCGCGCGG,-,0.00) -11(CGGCCCGA,-,0.00) -119(CGTCGCTG,+,0.00),82(CGTCGTTA,+,0.00) -122(GTCCGTCG,-,0.00),11(CTTCGGAC,+,0.00) 128(GGCCGGGCCCGC,-,0.00),129(GCCGGGCCCGCG,+,0.00) 137(CGCGGTGCCGCG,+,0.00),137(CGCGGTGCCGCG,-,0.00) 144(CCGCGTAG,-,0.00) -93(GCTTCCCAGC,-,0.00) -82(GCGGCCTAGCGG,+,0.00) 561_WT_peak_7604 chrX 118925249 118925678 + 190 NA intron (NM_001000, intron 1 of 2) CpG 159 NM_001000 6170 Hs.300141 NM_001000 HPRD:03546 RPL39 L39|RPL39P42|RPL39_23_1806 ribosomal protein L39 protein-coding 0.083916 0.618605 -154(GAAACCGGAATC,+,0.00) 68(AGCGGCCT,-,0.00) 248(CCGACCGC,+,0.00) -144(TCCCTGCCCG,+,0.00),26(TCCCGCCCCT,+,0.00) 77(GGGTTTTG,-,0.00) -121(CGGGCAAA,+,0.00) 106(GGGGGCCGATGG,+,0.00) -154(GAAACCGGAATC,+,0.00) 219(GGGCGGAGTT,+,0.00) -137(CCGACTCG,-,0.00),-136(CGACTCGG,+,0.00) 561_WT_peak_4570 chr20 17948916 17949478 + 189 NA promoter-TSS (NM_052865) promoter-TSS (NM_052865) 240 NM_014426 27131 Hs.316890 NM_014426 HPRD:10439 SNX5 - sorting nexin 5 protein-coding 0.110320 0.717584 90(CCCGCCTCCGCC,+,0.00) 41(CTGGGCCGCC,-,0.00) 106(TCCCTGCCCG,+,0.00) 120(CGGCAGGA,-,0.00) -12(TGGCGACG,-,0.00) 111(GCCCGACG,-,0.00) 236(CGGGCAAA,+,0.00) 30(GAAAGAAGAAGC,+,0.00) 47(CGCCGCCGCCGC,-,0.00),50(CGCCGCCGCCGC,-,0.00),206(CCCAGTCCCCGC,-,0.00) 294(CGCAGGGCCGCG,+,0.00) -9(CGACGCGG,+,0.00) -158(GCAGCCACGGCC,+,0.00),-19(GCGGCCATGGCG,+,0.00),-17(GGCCATGGCGAC,-,0.00),57(GCCGCCTGGGCG,+,0.00),79(GCGGCCACGGCC,+,0.00),81(GGCCACGGCCCC,-,0.00) 12(GCCGCCTGGCTG,+,0.00) 561_WT_peak_3605 chr19 8509874 8510468 + 189 NA intron (NM_001297418, intron 1 of 13) CpG 368 NM_031203 4670 Hs.465808 NM_005968 HPRD:01188 HNRNPM CEAR|HNRNPM4|HNRPM|HNRPM4|HTGR1|NAGR1|hnRNP M heterogeneous nuclear ribonucleoprotein M protein-coding 0.117845 0.727731 -60(GGCTCCGGGCCC,-,0.00),259(CGGACCGGAGAG,+,0.00) -135(GGCGGCGGAG,+,0.00),38(GGCGGCCTAG,+,0.00) 117(GCGGGGAGCCGG,-,0.00) -146(GGGGTCGA,-,0.00),-123(GGCGGCGA,-,0.00),100(GGCGTCTA,-,0.00),158(GGCCTCGA,-,0.00),210(TCGAGGCC,+,0.00) 285(CCGACCGC,+,0.00) -85(CGCCCGGC,-,0.00),124(GCCGGGGG,+,0.00) -79(GCGTGCCG,+,0.00) 338(CCTCTCCTCCCG,-,0.00) 96(TAGCGGCG,-,0.00) 337(CCCTCTCCTCCC,+,0.00) 4(GGCCGACG,-,0.00) -17(CGGGTAAG,+,0.00) 120(GGGAGCCGGGGG,+,0.00) 52(GGCGCGGC,-,0.00),230(GCTGCGCA,+,0.00) -88(GCGCGCCCGGCG,+,0.00) -63(CGGGGCTCCGGG,-,0.00),118(CGGGGAGCCGGG,+,0.00) 314(GGGCCGGGTT,+,0.00) 7(CGACGCGG,+,0.00) 561_WT_peak_6156 chr6 26216970 26217906 + 188 NA promoter-TSS (NM_003518) promoter-TSS (NM_003518) 290 NM_021052 3012 Hs.121017 NM_021052 HPRD:04152 HIST1H2AE H2A.1|H2A.2|H2A/a|H2AFA histone cluster 1, H2ae protein-coding 0.051282 0.472785 377(CGCGCAGGGCGG,-,0.00) 245(GACGGCCGAG,+,0.00) 62(AGCCACTA,-,0.00) 202(GGGCCGGCGCTC,-,0.00) 190(CCGAACGA,+,0.00) 164(CCGCCTCCTCCG,-,0.00) -130(TAGTGACG,-,0.00) 475(CAAATCCG,+,0.00) 102(CGGGCAAA,+,0.00) 199(TCGGGGCCGGCG,+,0.00) 130(GGGCCGGTCT,+,0.00),273(AACGCGGCTC,-,0.00) 195(CGAGTCGG,+,0.00) 91(GCGGCAAAGC,+,0.00) 561_WT_peak_4786 chr21 36398899 36399298 + 188 NA intron (NM_001754, intron 2 of 8) CpG 12625 NR_026812 80215 Hs.672131 NM_025143 RUNX1-IT1 C21orf96 RUNX1 intronic transcript 1 (non-protein coding) ncRNA 0.082707 0.582500 -7(GAGCGACG,-,0.00),88(CAGCGACG,-,0.00) 198(CAAACAGGATGC,+,0.00) 74(TGCGCAGC,-,0.00) 82(GCGCCGCAGC,-,0.00) 561_WT_peak_637 chr1 179851213 179851653 + 188 NA 5' UTR (NM_015602, exon 1 of 10) 5' UTR (NM_015602, exon 1 of 10) 256 NM_001267578 26092 Hs.496459 NM_015602 HPRD:13958 TOR1AIP1 LAP1|LAP1B torsin A interacting protein 1 protein-coding 0.063636 0.623583 -31(TCCCCCTTCTCC,+,0.00) -123(AGCGGCTA,-,0.00) 198(CGGCAGGA,-,0.00) 103(CAGCGACG,-,0.00) 50(CTCTCACAGCCC,+,0.00) 163(ACCGCCCA,+,0.00) 120(GCGGCCCCAGCG,+,0.00) 177(CCGAGAAG,-,0.00) -3(CAGCCAGGAGGC,-,0.00) 561_WT_peak_6053 chr5 180258059 180258592 + 188 NA non-coding (NR_045680, exon 1 of 1) non-coding (NR_045680, exon 1 of 1) 293 NR_045680 100859930 Hs.655606 NR_045680 HEIH HCCAT2|LINC-HEIH|LINC00848|lncRNA-HEIH hepatocellular carcinoma up-regulated EZH2-associated long non-coding RNA ncRNA 0.105066 0.677903 -102(AAGTCTCT,+,0.00) 273(CCGCCTCCCGGG,+,0.00) 58(GAGCTCCGGCCC,+,0.00) 70(CGGCACGT,-,0.00) 141(CGGGAGAAGAGG,+,0.00) 173(GCTTCCTGGTTT,-,0.00) -70(GCGCGCCCAGCG,+,0.00),-36(CGCCGCCGCCGC,-,0.00),-33(CGCCGCCGCCGC,-,0.00),41(GCGGCCCCAGGG,+,0.00),61(CTCCGGCCCCGG,-,0.00) 10(AGCGCCGCCC,-,0.00),38(AGAGCGGCCC,-,0.00) -25(CCGCCTCG,-,0.00),252(CGTCTCGG,+,0.00) 153(GGCCGTGGCGCC,-,0.00),159(GGCGCCATCGCG,+,0.00),241(GGCAATGGCGCC,-,0.00) 561_WT_peak_2278 chr14 73061095 73061480 + 188 NA Intergenic Intergenic 77759 NR_106994 102465832 NR_106994 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA 0.012987 0.440415 106(AACCACTT,-,0.00) 50(GTTACCCG,-,0.00) 561_WT_peak_4795 chr21 38739115 38739560 + 188 NA promoter-TSS (NM_101395) promoter-TSS (NM_101395) -522 NM_101395 1859 Hs.368240 NM_001396 HPRD:09018 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A protein-coding 0.132584 0.715247 -108(CGGGGGTGGCGG,-,0.00),-75(CCGGGGAGACTG,-,0.00) -146(CCGCCCGA,+,0.00) -110(GGCGGGGG,+,0.00),-86(GGCGGGGG,+,0.00) 53(TGGTGCCG,+,0.00) 257(GCTGCGCA,+,0.00) 8(CGCCGCCGCCGC,-,0.00),11(CGCCGCCGCCGC,-,0.00),59(CGCTGCCGCCGC,-,0.00),226(CGCCGCCGCCGC,-,0.00),237(CCCGGGCCCCGG,-,0.00) -45(ATCGCGGCCC,-,0.00) 233(GCCGCCCGGGCC,+,0.00) 7(GCGCCGCCGC,-,0.00) 561_WT_peak_4956 chr22 43045495 43045968 + 188 NA promoter-TSS (NM_000398) promoter-TSS (NM_000398) -326 NM_000398 1727 Hs.561064 NM_000398 HPRD:08942 CYB5R3 B5R|DIA1 cytochrome b5 reductase 3 protein-coding 0.078224 0.683544 156(CGGCCCGCCCGG,+,0.00),170(CCTCCTCGCCGG,+,0.00) -72(TCGCCGCC,+,0.00) -7(CCCCCGGC,-,0.00) 125(TCGGGCCG,+,0.00) 131(CGGGTTAA,+,0.00) 176(CGCCGGCGGCGC,-,0.00) -81(GGGCCTCGTT,+,0.00),62(AGCGCGGCCC,-,0.00),127(GGGCCGGGTT,+,0.00) 561_WT_peak_6819 chr7 108209713 108210013 + 188 NA promoter-TSS (NM_001287598) promoter-TSS (NM_001287598) 34 NM_182529 168451 Hs.707689 NM_182529 HPRD:15498 THAP5 - THAP domain containing 5 protein-coding 0.076667 0.594684 -59(CACGTACG,+,0.00) -75(GCCGCGGG,+,0.00) -79(TCTTGCCG,+,0.00) 56(CGGATAAA,+,0.00) 117(GCTGCGCA,+,0.00) 561_WT_peak_7377 chr9 102861199 102861669 + 188 NA promoter-TSS (NM_183245) promoter-TSS (NM_183245) -68 NM_014425 27130 Hs.558477 NM_014425 HPRD:08356 INVS INV|NPH2|NPHP2 inversin protein-coding 0.087234 0.666667 111(GGCGGAGGGCGG,-,0.00) -45(ACTTCCGGGTCC,-,0.00) -64(AGAGGCCT,-,0.00),-62(AGGCCTCT,+,0.00) 124(TGTACGCG,-,0.00) 185(TCGGGCGG,-,0.00) 260(CGGCAGGA,-,0.00) -155(GGGAGCCGACGG,+,0.00) 254(CCGGCCCGGCAG,+,0.00) 561_WT_peak_1092 chr10 93169465 93170017 + 188 NA promoter-TSS (NM_173497) promoter-TSS (NM_173497) -301 NM_001284274 143279 Hs.596096 NM_173497 HPRD:13643 HECTD2 - HECT domain containing E3 ubiquitin protein ligase 2 protein-coding 0.110507 0.707052 243(CTCTCCGGGCCC,-,0.00) 310(CCGGGCGGGCGG,-,0.00),319(CGGGGGAGGCGA,-,0.00),361(CCGCGTCCGCGG,+,0.00) 10(TCGGCGCC,+,0.00),223(GGCGTCGA,-,0.00) 372(GGGCTGGCGCGC,-,0.00) 362(CGCGTCCG,+,0.00),364(CGTCCGCG,-,0.00) 93(CCGTCCGA,+,0.00),216(GCGGTCGG,-,0.00) 317(GGCGGGGG,+,0.00) 94(CGTCCGAC,+,0.00),95(GTCCGACC,-,0.00) -138(GCTGCGCA,+,0.00),157(TGCGCGGC,-,0.00) 158(GCGCGGCCCGGG,+,0.00),369(GCGGGGCTGGCG,+,0.00) 354(TGGGGAGCCGCG,+,0.00) 294(CCGCGACG,-,0.00) 160(GCGGCCCGGGTG,+,0.00) 561_WT_peak_3670 chr19 16477969 16478429 + 188 NA intron (NR_047665, intron 21 of 22) intron (NR_047665, intron 21 of 22) 42548 NM_016270 10365 Hs.744182 NM_016270 HPRD:03602 KLF2 LKLF Kruppel-like factor 2 protein-coding 0.026087 0.446855 -117(TCGATGCC,+,0.00) 272(GCTGCGCA,+,0.00) 561_WT_peak_2221 chr14 55518211 55518660 + 187 NA promoter-TSS (NM_144578) promoter-TSS (NM_144578) 73 NM_144578 93487 Hs.594338 NM_144578 HPRD:12647 MAPK1IP1L C14orf32|MISS|c14_5346 mitogen-activated protein kinase 1 interacting protein 1-like protein-coding 0.120267 0.731111 -144(CGGCCCGGAGCC,+,0.00) -66(CGCACGCG,-,0.00) 274(TCGGGCCG,+,0.00) 95(CCTCGGAC,+,0.00) -10(GCTTCCTGTTCC,-,0.00) -59(GGCGCGGC,-,0.00),215(GGCGCGGC,-,0.00),236(GGCGCGGT,-,0.00) -140(CCGGAGCCGGCG,+,0.00),203(GCGGAGCCCGCG,+,0.00) 9(GGAGGAGCCGCG,+,0.00) -148(AAAGCGGCCC,-,0.00) 218(GCGGCCAAGC,+,0.00) -103(CTGGCGGGCCGC,-,0.00),60(CAGTCAGGCTGC,-,0.00) 561_WT_peak_6018 chr5 171540058 171540365 + 186 NA intron (NM_005990, intron 4 of 18) L1ME4a|LINE|L1 75135 NM_005990 6793 Hs.744005 NM_005990 HPRD:06796 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding 0.009772 0.422078 -86(TGGTTTTG,-,0.00),58(CAAAACCC,+,0.00) 35(GGGCATGCCGGC,-,0.00) 561_WT_peak_2128 chr14 23039096 23039482 + 186 NA intron (NM_001344, intron 2 of 2) intron (NM_001344, intron 2 of 2) 18854 NM_001344 1603 Hs.82890 NM_001344 HPRD:02589 DAD1 OST2 defender against cell death 1 protein-coding 0.012953 0.459948 170(TAGCCGCT,+,0.00) -28(GGGCCACTTT,+,0.00) 561_WT_peak_1507 chr11 119039425 119039841 + 186 NA 5' UTR (NM_001282144, exon 1 of 10) 5' UTR (NM_001282144, exon 1 of 10) 211 NM_024618 79671 Hs.524082 NM_024618 HPRD:17640 NLRX1 CLR11.3|DLNB26|NOD26|NOD5|NOD9 NLR family member X1 protein-coding 0.112981 0.769784 -147(CGGGGATGGAGG,-,0.00),24(CCGCGCAGGCGG,-,0.00),236(CGGGGGAGGAGG,-,0.00) 156(GCCGCGGG,+,0.00),234(GCCGGGGG,+,0.00) 211(GCGCTGAGCGGG,-,0.00) 131(GGCCGACG,-,0.00) 160(CGGGTAAA,+,0.00) 133(CCGACGGCTCCC,-,0.00) 23(GCCGCGCA,+,0.00) 62(CGAGGAGCCGGG,+,0.00) 223(GGGCAGGGCGGG,-,0.00) -80(GCTCCGGAGC,+,0.00),-80(GCTCCGGAGC,-,0.00),200(GCTGGGAGGC,+,0.00) 192(GCGCCCTGGCTG,+,0.00) 561_WT_peak_4962 chr22 46067757 46068133 + 186 NA exon (NM_001167621, exon 1 of 11) exon (NM_001167621, exon 1 of 11) 267 NM_013236 25814 Hs.475125 NM_013236 HPRD:04624 ATXN10 E46L|HUMEEP|SCA10 ataxin 10 protein-coding 0.114362 0.742706 -58(CCTCCCTCCTCG,+,0.00),-33(TCGTCCTCCTCG,+,0.00),-24(TCGCCTTCCTCC,+,0.00) 132(GGAACCGGTAAC,+,0.00) 178(GGCGGCCGGG,+,0.00) 151(GCCGGGGG,+,0.00),191(CCCGCGGC,-,0.00) 16(CGGCAAGA,-,0.00),66(TGGTGCCG,+,0.00) -120(GCGGCGGCGGCG,+,0.00),195(CGGCGGCCCCGG,-,0.00) -154(GCGGCGGCGC,+,0.00),-151(GCGGCGCAGC,+,0.00),-151(GCGGCGCAGC,-,0.00) 30(CGCCCAGGCCGC,-,0.00) 561_WT_peak_776 chr1 228761530 228761800 + 186 NA Intergenic CpG -18729 NR_037962 58480 Hs.647774 NM_021205 HPRD:06965 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding 0.070370 0.601476 -153(CCCGGGAGGCGG,-,0.00) 90(GGCGCCTGGCTG,+,0.00) 561_WT_peak_121 chr1 26798978 26799518 + 186 NA intron (NM_005517, intron 1 of 5) CpG 346 NM_005517 3151 Hs.181163 NM_005517 HMGN2 HMG17 high mobility group nucleosomal binding domain 2 protein-coding 0.127778 0.737523 141(CTCGGCTGCC,-,0.00),181(GGCGGCCGCG,+,0.00) 207(TGGCGGCT,+,0.00) 81(CAGCCTCCCCGC,+,0.00),323(GCGGGAAGGCGG,-,0.00) -52(TCGCCGCC,+,0.00),58(TCGGCGCC,+,0.00),60(GGCGCCGA,-,0.00),237(TCGCCGCC,+,0.00) -113(CGGACCGA,+,0.00),-109(CCGACCAA,+,0.00) 282(TCCCTCCCCT,+,0.00) 243(CCCCCGCC,-,0.00),350(GGCGGGGG,+,0.00) 310(CAAACCCG,+,0.00) 23(CGCCGCCGCCGC,-,0.00),238(CGCCGCCCCCGC,-,0.00) -44(GCCACCATGCCC,+,0.00) 137(GCGGCTCGGCTG,+,0.00) 561_WT_peak_5910 chr5 132023839 132024059 + 186 NA Intergenic Intergenic 14271 NM_000589 3565 Hs.73917 NM_000589 HPRD:00989 IL4 BCGF-1|BCGF1|BSF-1|BSF1|IL-4 interleukin 4 protein-coding 0.009091 0.502262 561_WT_peak_3356 chr17 74553658 74554043 + 186 NA promoter-TSS (NR_038111) promoter-TSS (NR_038111) 4 NR_038109 100507246 Hs.288215 NR_038108 ENSG00000163597 SNHG16 ncRAN small nucleolar RNA host gene 16 (non-protein coding) ncRNA 0.075325 0.598446 74(CGGTGTTG,-,0.00) -6(CCGAGAAG,-,0.00) -88(CGGCCAGCCCCC,-,0.00),42(GCCGCGTGGCTG,+,0.00),123(GCTGCCTGGGTG,+,0.00) 561_WT_peak_5906 chr5 131813087 131813703 + 186 NA Intergenic Intergenic 13070 NM_002198 3659 Hs.436061 NM_002198 HPRD:00961 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding 0.012987 0.596434 328(CTCGGCCCCC,-,0.00) -68(CAGCGCCCGCCT,+,0.00) -144(CACCCAGGCTGC,-,0.00) 561_WT_peak_3887 chr19 54023914 54024307 + 186 NA promoter-TSS (NM_018555) promoter-TSS (NM_018555) -67 NM_018555 55422 Hs.185674 NM_018555 HPRD:05827 ZNF331 RITA|ZNF361|ZNF463 zinc finger protein 331 protein-coding 0.055980 0.581218 29(AGCCGCTT,-,0.00),76(AGAGGCCT,-,0.00),78(AGGCCTCT,+,0.00) 153(TGCGTCGA,-,0.00) -164(CCGCGTAG,-,0.00) -133(GGGCATGGCTCC,-,0.00) 561_WT_peak_6841 chr7 129690836 129691353 + 185 NA exon (NM_016478, exon 1 of 10) exon (NM_016478, exon 1 of 10) 197 NM_001282190 51530 Hs.194157 NM_016478 ENSG00000091732 ZC3HC1 NIPA zinc finger, C3HC-type containing 1 protein-coding 0.061896 0.567568 177(AAACGCTT,-,0.00) 64(TCCACGCC,+,0.00) -32(CCGACCGA,+,0.00) -159(GTCCGATG,-,0.00),30(CGCCGGAC,+,0.00) -102(CAAAGCCG,+,0.00) 315(GCGGGGCCCACG,+,0.00) -40(CCGAGTCG,-,0.00) 290(GCAGCCTGGCTG,+,0.00) 561_WT_peak_3312 chr17 63519569 63519819 + 185 NA Intergenic Intergenic 38046 NM_004655 8313 Hs.156527 NM_004655 HPRD:04935 AXIN2 AXIL|ODCRCS axin 2 protein-coding 0.004000 0.326693 561_WT_peak_7266 chr9 43133611 43133951 + 185 NA promoter-TSS (NM_001012419).2 promoter-TSS (NM_001012419).2 -237 NM_001012421 441430 Hs.632663 NM_001012421 HPRD:18652 ANKRD20A2 - ankyrin repeat domain 20 family, member A2 protein-coding 0.120588 0.736070 -83(AAGCCGTT,+,0.00) 5(CCGGGCTCCCGG,+,0.00) 50(GGGCTGCAGCTC,-,0.00) -103(CAGACCGA,+,0.00) -109(ACCTCTCAGACC,+,0.00),140(GGCCTGAGAAGG,-,0.00) -85(CAAAGCCG,+,0.00) -28(CCCTGGCGGCGC,-,0.00),127(GCGCAGCCAGCC,+,0.00) -30(CTCCCTGGCGGC,-,0.00),100(CGCCCGGGCGGC,-,0.00) 164(GCCTTGCAGC,-,0.00) 130(CAGCCAGCCCGG,-,0.00) 561_WT_peak_3703 chr19 23869461 23869975 + 185 NA intron (NM_138330, intron 1 of 3) intron (NM_138330, intron 1 of 3) 299 NM_138330 171392 Hs.264345 NM_138330 HPRD:18193 ZNF675 TBZF|TIZ zinc finger protein 675 protein-coding 0.044747 0.613592 25(GGGCTGGCTGTC,-,0.00) -49(CGGGTACA,+,0.00) 134(CCCGCCATAGCC,+,0.00) 23(CGGGGCTGGCTG,+,0.00) 561_WT_peak_3531 chr18 72264379 72264887 + 185 NA non-coding (NR_024484, exon 1 of 2) non-coding (NR_024484, exon 1 of 2) 438 NR_024484 400657 Hs.61508 NM_001008234 HPRD:17385 LINC00909 - long intergenic non-protein coding RNA 909 ncRNA 0.070866 0.589391 99(GTTTCCGGCGCC,-,0.00) -138(TAGCGGCT,+,0.00),-137(AGCGGCTT,-,0.00),60(AGGCCTCT,+,0.00) 220(CAGCCCTCCCGG,+,0.00) 237(CAGCGCCTGCCT,+,0.00) 230(GGGCTGACAGCG,-,0.00) 253(GCCCGACG,-,0.00) 284(CCTTCGGCTCTC,-,0.00) -133(GCTTCCTGTGGC,-,0.00) 41(GGGCTGCGTT,+,0.00),105(GGCGCCGCCC,-,0.00) 561_WT_peak_6413 chr6 106038841 106039196 + 185 NA Intergenic Intergenic -188019 NM_002726 5550 Hs.436564 NM_002726 HPRD:02673 PREP PE|PEP prolyl endopeptidase protein-coding 0.002817 0.432584 134(AGCCACTT,-,0.00) 561_WT_peak_5990 chr5 154134210 154134606 + 185 NA intron (NM_015315, intron 1 of 18) CpG 41946 NM_015315 23367 Hs.292078 NM_015315 HPRD:11225 LARP1 LARP La ribonucleoprotein domain family, member 1 protein-coding 0.083333 0.685139 -135(AGGCCCGGAGTT,+,0.00) 181(AGGCCGCT,+,0.00) -103(TCGAGGCC,+,0.00),-86(GGCGGCGA,-,0.00) -20(GGGGACCGAAGG,+,0.00),59(CCTTCGGCCTCC,-,0.00) 19(GGGCGGCGTT,+,0.00) -85(GCGGCGAGGC,+,0.00) 142(CCGGCAGGCCGC,-,0.00) 561_WT_peak_5918 chr5 133561194 133561812 + 185 NA promoter-TSS (NR_037434) promoter-TSS (NR_037434) 55 NR_037434 100500905 NR_037434 miRBase:MI0016062 MIR3661 - microRNA 3661 ncRNA 0.122977 0.712439 -7(CGGACCGGCGGC,+,0.00) 27(CACGGCCGCC,-,0.00),344(CTCGGCCGTC,-,0.00) 297(TGGCGGCT,+,0.00) -137(GGAGTCGA,-,0.00) 213(CGGCTGCCGCTC,-,0.00),309(AGGCTGGCGCTG,-,0.00) 57(CCCGCGGC,-,0.00),417(GCCGGGCG,+,0.00),436(CGCCCGGC,-,0.00) 350(CGTCGGCC,+,0.00) -89(TGCGCGGG,-,0.00) 51(CTCGGCCCCGCG,-,0.00),217(TGCCGCTCCGCG,-,0.00) 49(GGCTCGGCCC,-,0.00) 55(GCCCCGCGGC,-,0.00),237(GCGCCGCCGC,-,0.00) 561_WT_peak_3402 chr17 80821866 80822151 + 184 NA intron (NM_005993, intron 13 of 38) intron (NM_005993, intron 13 of 38) -24077 NM_024702 79755 Hs.464391 NM_024702 HPRD:08588 ZNF750 ZFP750 zinc finger protein 750 protein-coding 0.010526 0.465035 79(AAGCGTCT,+,0.00) -126(CAGTTTTG,-,0.00) 14(TGGGTAAA,+,0.00) -32(CGGCATGGCTGC,-,0.00) -33(GCGGCATGGCTG,+,0.00) 561_WT_peak_45 chr1 8938886 8939390 + 184 NA promoter-TSS (NM_001428) promoter-TSS (NM_001428) 13 NM_001428 2023 Hs.517145 NM_001428 HPRD:01400 ENO1 ENO1L1|MPB1|NNE|PPH enolase 1, (alpha) protein-coding 0.126984 0.752475 153(CCTCCTGCCCCG,+,0.00) 203(GGCGTCGA,-,0.00) 135(GCCCGGGCCT,+,0.00) 176(TCGCGCCG,+,0.00) 83(CGTCGCTC,+,0.00) 308(TGCGCGCT,-,0.00),324(GCCGCGCC,+,0.00) -11(GCGGAGCCGGGG,+,0.00),255(CGCTGGCCCCGC,-,0.00),294(GCGCCGCCTGCG,+,0.00) -12(TGCGGAGCCGGG,+,0.00),-4(CGGGGCTCCGGG,-,0.00) 24(CGTGGCGG,+,0.00) 260(GCCCCGCCGC,-,0.00) 20(GCGGCGTGGCGG,+,0.00) 561_WT_peak_6822 chr7 112429931 112430468 + 184 NA intron (NM_001287497, intron 1 of 5) CpG 279 NM_022484 64418 Hs.606345 NM_022484 TMEM168 - transmembrane protein 168 protein-coding 0.091248 0.637546 307(GTTACCGGCCCG,-,0.00) 124(CTCGGCCGTC,-,0.00) 87(TCGCCGCC,+,0.00) 265(CATACGCG,-,0.00) 9(CCCCGGCCCT,+,0.00) 234(CGGCACGC,-,0.00) 130(CGTCGCCA,+,0.00) -155(GTCCGACA,-,0.00) 171(CAAAACCA,+,0.00) 55(CGCGGAGCCCTG,+,0.00) 31(GGGCGGAGCT,+,0.00) -153(CCGACAAG,-,0.00),350(CCGCGACG,-,0.00) 89(GCCGCCCTGCCG,+,0.00) 311(CCGGCCCGGCCG,+,0.00),312(CGGCCCGGCCGC,-,0.00) 561_WT_peak_1620 chr12 14923353 14924229 + 184 NA exon (NM_175054, exon 1 of 1) exon (NM_175054, exon 1 of 1) 274 NM_175054 121504 Hs.745457 NM_175054 HPRD:13662 HIST4H4 H4/p histone cluster 4, H4 protein-coding 0.062785 0.551881 368(TTGACGCC,+,0.00) 232(CGCGTACA,+,0.00) 35(TCGGGCCG,+,0.00) 433(CAGCACCTTCCG,-,0.00) 380(CGTCGGGC,+,0.00) 258(CGGTCTTG,-,0.00),403(CGGCTTTG,-,0.00) 91(TTTACCCG,-,0.00) -63(TGCGCGGC,-,0.00) 616(GGGCGGAGCT,+,0.00) 8(CCGCCAAG,-,0.00) 561_WT_peak_3796 chr19 45874071 45874289 + 184 NA promoter-TSS (NM_001130867) promoter-TSS (NM_001130867) -335 NM_001130867 2068 Hs.487294 NM_000400 HPRD:00530 ERCC2 COFS2|EM9|TFIIH|TTD|XPD excision repair cross-complementation group 2 protein-coding 0.050459 0.479452 -53(CCCCCGCC,-,0.00) 561_WT_peak_2772 chr16 30006768 30007534 + 184 NA promoter-TSS (NM_173618) promoter-TSS (NM_173618) 266 NM_003609 8479 Hs.567370 NM_003609 HPRD:04531 HIRIP3 - HIRA interacting protein 3 protein-coding 0.092689 0.612777 36(CTCGGCCTCC,-,0.00) 407(AAGTGTCT,+,0.00) 531(CCGGGAGGTCGG,-,0.00) 245(TCGGCGCC,+,0.00) -157(CGTAAGCG,-,0.00),68(CGCGCACG,+,0.00),70(CGCACGCG,-,0.00) -118(CCGACCCA,+,0.00) -52(CGGAAGAAGCTA,+,0.00),-23(CTCCTTCTCCCG,-,0.00) 474(CGTCGCTG,+,0.00) -40(CGGGTGAA,+,0.00) 33(CTTCTCGG,+,0.00),281(CCGCGACG,-,0.00),471(CCGCGTCG,-,0.00) 473(GCGTCGCTGC,-,0.00) 315(CAGCTAGGCTGC,-,0.00) 561_WT_peak_5980 chr5 148930466 148931427 + 184 NA 5' UTR (NM_001271741, exon 1 of 10) 5' UTR (NM_001271741, exon 1 of 10) 169 NM_001271741 1452 Hs.529862 NM_001892 HPRD:02739 CSNK1A1 CK1|CK1a|CKIa|HEL-S-77p|HLCDGP1|PRO2975 casein kinase 1, alpha 1 protein-coding 0.086368 0.638254 -11(GGAGGAGGGCGG,-,0.00) 419(GGAACCGGATCC,+,0.00) 151(CTCGGCGGCC,-,0.00) 341(AGCCGCTT,-,0.00) 536(CCCCCGTCCCGG,+,0.00) 219(GGCGGCGA,-,0.00),284(ACGACGCC,+,0.00) 279(CGCGGACG,+,0.00) 562(CCGGTCGG,-,0.00) 637(CCCCCGGC,-,0.00) -2(CGGCAGGA,-,0.00),515(GCGTGCCG,+,0.00) 343(CCGCTTCTTCAC,-,0.00) 601(CCTCGGAC,+,0.00) 737(CGGTTTTT,-,0.00) 23(TTTACCGG,-,0.00) 665(CCTTCATGTTTC,-,0.00) 175(TGCGCGGC,-,0.00),204(GGCGCGGT,-,0.00),469(ACCGCCCA,+,0.00),477(GCTGCGCA,+,0.00),506(ACTGCGCA,+,0.00) 245(CGCCGGCTCCGG,-,0.00) 117(CTTCTCGG,+,0.00),185(CGTCGCGG,+,0.00) 92(TTGCCAGGCCGC,-,0.00) 561_WT_peak_1326 chr11 62648443 62649037 + 184 NA promoter-TSS (NR_037193) promoter-TSS (NR_037193) 396 NM_001013251 6520 Hs.502769 NM_002394 HPRD:01148 SLC3A2 4F2|4F2HC|4T2HC|CD98|CD98HC|MDU1|NACAE solute carrier family 3 (amino acid transporter heavy chain), member 2 protein-coding 0.092593 0.660504 327(CCCCCGTCCCGG,+,0.00) -136(TCGTGTCG,+,0.00),179(TGGTGCCG,+,0.00) 31(CGGAAGACGAGG,+,0.00) 422(TACCGACG,-,0.00) -127(CGGTTCTG,-,0.00) 204(GCGCCGCGTT,+,0.00) -56(CCGAGAAG,-,0.00),-2(CCGAGAAG,-,0.00),38(CGAGGCGG,+,0.00) -24(GCGGCCATGTCC,+,0.00),-16(GTCCCTGGCGGG,-,0.00),288(GGCCACGGCGCG,-,0.00) 561_WT_peak_5992 chr5 154237480 154238017 + 184 NA promoter-TSS (NM_001301074) promoter-TSS (NM_001301074) -61 NM_001301083 9337 Hs.26703 NM_004779 HPRD:07225 CNOT8 CAF1|CALIF|Caf1b|POP2|hCAF1 CCR4-NOT transcription complex, subunit 8 protein-coding 0.078212 0.587361 21(GGAGGAGGGGGC,-,0.00) 157(TCGCTCGG,-,0.00) 107(GGCGGGGG,+,0.00) -13(TCGTGCCA,+,0.00) -158(CGGCTTTG,-,0.00) 96(GCCGCGCC,+,0.00),318(TGCGCGCT,-,0.00) 101(GCCCACGGCGGG,-,0.00) 561_WT_peak_7374 chr9 102581705 102582241 + 184 NA intron (NR_109802, intron 1 of 6) CpG 198 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA 0.121269 0.733706 149(TCGCCCTGCTCA,+,0.00) 189(AGCCGCCA,-,0.00) 244(GGCGCCGA,-,0.00),262(TCGTCGCC,+,0.00) -6(GCCGCGGG,+,0.00),239(CCCCCGGC,-,0.00),313(CCCCCGCC,-,0.00) 225(CCCACTCACCCC,+,0.00) 175(CGCCGGAC,+,0.00) 336(GCGGGGTCAGGG,+,0.00) 3(AGCTCCGCCC,-,0.00),251(AGCCCGGCCC,-,0.00),306(GACTCCGCCC,-,0.00) -64(CCGCCTCG,-,0.00),18(CGACTCGG,+,0.00) 190(GCCGCCAGCGCC,+,0.00) 561_WT_peak_606 chr1 167684628 167684906 + 184 NA Intergenic tRNA-Pro-CCY|tRNA|tRNA -6420 NM_024569 9019 Hs.493919 NM_003953 HPRD:05086 MPZL1 MPZL1b|PZR|PZR1b|PZRa|PZRb myelin protein zero-like 1 protein-coding 0.039568 0.448029 67(AAGTGGTT,+,0.00) -74(CAAAACAG,+,0.00) 561_WT_peak_5141 chr3 59436879 59437362 + 184 NA Intergenic Intergenic -401405 NM_198463 200844 Hs.368434 NM_198463 HPRD:13458 C3orf67 - chromosome 3 open reading frame 67 protein-coding 0.012422 0.450413 49(AGGCCTCT,+,0.00),239(AGCCACAT,-,0.00) 283(TCGACTCC,+,0.00) -46(CTGGTAAA,+,0.00) 561_WT_peak_4951 chr22 42486313 42486839 + 184 NA promoter-TSS (NR_034118) promoter-TSS (NR_034118) 312 NM_002490 4700 Hs.274416 NM_002490 HPRD:11884 NDUFA6 B14|CI-B14|LYRM6|NADHB14 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa protein-coding 0.087452 0.635674 98(GCCTCCGGGTCC,-,0.00) 116(AAGCCGCT,+,0.00),117(AGCCGCTA,-,0.00) -79(CACGTACG,+,0.00),316(CGCGTGCG,+,0.00) 203(CCGACTGA,+,0.00) 99(CCTCCGGGTCCC,-,0.00) -46(ACCGCGCC,+,0.00),158(GGCGCGGT,-,0.00) 256(CGCCGCTCCCCG,-,0.00) 247(CTTGGCGG,+,0.00) -38(GCCGCCAGGTCC,+,0.00) -43(GCGCCGCCGC,-,0.00) 68(CGGCCGGGCCGG,-,0.00) 561_WT_peak_5194 chr3 107843421 107843880 + 184 NA promoter-TSS (NR_110030) promoter-TSS (NR_110030) -261 NR_110030 101929623 Hs.570653 NR_110028 LINC01215 - long intergenic non-protein coding RNA 1215 ncRNA 0.017429 0.513043 90(AGGCCTCT,+,0.00) 43(CGGCAGGA,-,0.00) 65(GAGCTGCGAGGG,-,0.00) -55(CCTTCTGCTCCC,-,0.00) -49(GCTCCCTGTTTC,-,0.00) -16(AGGCCGAGTT,+,0.00) 67(GCTGCGAGGG,+,0.00) 561_WT_peak_1735 chr12 57881526 57881913 + 184 NA promoter-TSS (NM_004990) promoter-TSS (NM_004990) -17 NM_004990 4141 Hs.632707 NM_004990 HPRD:08864 MARS METRS|MRS|MTRNS|SPG70 methionyl-tRNA synthetase protein-coding 0.064599 0.556701 121(AGGCCGCT,+,0.00) 139(GCGGGAGGCCGG,-,0.00) -110(CAAGACCG,+,0.00) 66(GCGGTGCCAGGG,+,0.00) 561_WT_peak_3591 chr19 5790591 5791153 + 184 NA intron (NM_001161619, intron 1 of 11) CpG 377 NM_020175 56931 Hs.284297 NM_020175 HPRD:14252 DUS3L DUS3 dihydrouridine synthase 3-like (S. cerevisiae) protein-coding 0.081851 0.632327 199(TCGCCCTCAGCC,+,0.00) 171(CGGCCCGGAATG,+,0.00) 279(CCTCCTGCCCCG,+,0.00) -51(CCCGCGGC,-,0.00) 268(CCTTCAGCTTCC,-,0.00),333(GCTCCGGCTCCC,-,0.00) 343(CCGAGTCG,-,0.00) -53(GCCCCGCGGC,-,0.00) 561_WT_peak_7040 chr8 67025501 67026010 + 184 NA Intergenic Intergenic -13523 NM_184087 84675 Hs.85524 NM_033058 HPRD:05927 TRIM55 MURF-2|RNF29|muRF2 tripartite motif containing 55 protein-coding 0.070727 0.582353 13(GATTCCGGCTCG,-,0.00) 0(AGGTCGCT,+,0.00) -73(CGTACACG,-,0.00) 243(CCGAGCGA,+,0.00) 18(CGGCTCGA,-,0.00) -111(CGGTTTTT,-,0.00),38(CGGTTTTT,-,0.00) 278(TTAACCCG,-,0.00) 150(GCCTCCCAGC,-,0.00) 561_WT_peak_5852 chr5 90678898 90679276 + 184 NA promoter-TSS (NM_020801) promoter-TSS (NM_020801) 62 NM_020801 57561 Hs.24684 NM_020801 HPRD:09810 ARRDC3 TLIMP arrestin domain containing 3 protein-coding 0.068783 0.519789 34(CCGCGCTCCCGC,+,0.00),157(CCGCCCTCCCTG,+,0.00) 76(CGGCTAAA,+,0.00) 184(GCCGCGCC,+,0.00),189(GCCGCGCC,+,0.00) 138(CGCAGGCCGCGG,-,0.00) 27(TGCTGCTCCGCG,-,0.00),183(CGCCGCGCCGCG,+,0.00),183(CGCCGCGCCGCG,-,0.00),188(CGCCGCGCCGCG,+,0.00),188(CGCCGCGCCGCG,-,0.00) 561_WT_peak_4383 chr2 180871573 180871997 + 184 NA promoter-TSS (NM_020943) promoter-TSS (NM_020943) -5 NM_020943 57703 Hs.311363 NM_020943 HPRD:17220 CWC22 EIF4GL|NCM|fSAPb CWC22 spliceosome-associated protein protein-coding 0.073113 0.557647 -132(TAGCCGCT,+,0.00),-71(ATGCCGCT,+,0.00) 70(ACCGCGCC,+,0.00) 561_WT_peak_3112 chr17 30227991 30228309 + 184 NA intron (NM_018428, intron 1 of 18) L2c|LINE|L2 579 NM_018428 55813 Hs.589862 NM_018428 UTP6 C17orf40|HCA66 UTP6, small subunit (SSU) processome component, homolog (yeast) protein-coding 0.006289 0.426332 561_WT_peak_2313 chr14 81686877 81687307 + 184 NA 5' UTR (NM_015859, exon 1 of 9) 5' UTR (NM_015859, exon 1 of 9) 204 NM_001278940 2957 Hs.592334 NM_015859 HPRD:02748 GTF2A1 TF2A1|TFIIA|TFIIA-42|TFIIAL general transcription factor IIA, 1, 19/37kDa protein-coding 0.076744 0.582367 -11(GGAGGAGGAGGG,-,0.00),-8(GGAGGAGGGGGG,-,0.00) 166(CAGCTCCAGCCG,+,0.00) 188(CCGCTTCTCTCC,-,0.00) -125(CAAAACCA,+,0.00) 237(CGCCGCCGCCGC,-,0.00),240(CGCCGCCGCCGC,-,0.00),243(CGCCGCCGCCGC,-,0.00) 141(GCGCCGCCGC,-,0.00) 561_WT_peak_2546 chr15 72765973 72767081 + 184 NA promoter-TSS (NM_005744) promoter-TSS (NM_005744) -140 NM_005744 25820 Hs.268787 NM_005744 HPRD:05730 ARIH1 ARI|HARI|HHARI|UBCH7BP ariadne RBR E3 ubiquitin protein ligase 1 protein-coding 0.094765 0.636610 645(CCTCCCTCCTCC,+,0.00),918(GGAGGAGGAGGA,-,0.00),921(GGAGGAGGACGA,-,0.00) 657(GCGCCCTCCCCG,+,0.00),914(CCGAGGAGGAGG,-,0.00) 910(GGCGCCGA,-,0.00) 251(CGTAGGCG,-,0.00) 789(TCCCCGCCCT,+,0.00) 603(CGTCTGAC,+,0.00),817(GTCCGCCG,-,0.00),873(GTTCGACG,-,0.00) 380(CGCTCGGCTCCC,-,0.00),390(CCCTCGGGTCCC,-,0.00) 658(CGCCCTCCCCGC,-,0.00),722(GCGGGGCCGGAG,+,0.00),795(CCCTCTCCCCGC,-,0.00) 593(AGCGGAGCCGCG,+,0.00),706(GGAGGAGCCGCG,+,0.00) 623(CAAGCGGCCC,-,0.00) 502(CGACGCGG,+,0.00),803(CCGCCTCG,-,0.00) 838(CGCGCCATGGAC,+,0.00) 819(CCGCCGGGCCCC,-,0.00) 561_WT_peak_4840 chr22 20818444 20818779 + 183 NA intron (NR_033825, intron 3 of 5) intron (NR_033825, intron 3 of 5) -26465 NM_153334 91179 Hs.474251 NM_153334 HPRD:15299 SCARF2 NSR1|SREC-II|SREC2|SRECRP-1|VDEGS scavenger receptor class F, member 2 protein-coding 0.023881 0.550595 42(GCAGCAGGAAGC,+,0.00) 561_WT_peak_7579 chrX 71496826 71497142 + 183 NA intron (NM_001007, intron 1 of 6) CpG 157 NM_001007 6191 Hs.118076 NM_001007 RPS4X CCG2|DXS306|RPS4|S4|SCAR|SCR10 ribosomal protein S4, X-linked protein-coding 0.091772 0.652997 -108(TCGCCCTTCGCC,+,0.00) 42(AAACGGCT,+,0.00),43(AACGGCTT,-,0.00) -3(GCCGGGGG,+,0.00) 561_WT_peak_3413 chr18 2636591 2636885 + 183 NA Intergenic Intergenic 18656 NR_033754 645158 Hs.712861 NR_033754 ENSG00000266405 CBX3P2 - chromobox homolog 3 pseudogene 2 pseudo 0.017007 0.454237 -125(CTCGGCCGCT,-,0.00) -11(TAGGGACG,-,0.00) 561_WT_peak_7083 chr8 101505547 101505739 + 183 NA Intergenic Intergenic 66296 NM_001270378 157567 Hs.530199 NM_198401 HPRD:14103 ANKRD46 ANK-S|GENX-115279 ankyrin repeat domain 46 protein-coding 0.010417 0.523316 561_WT_peak_7649 chrY 15016787 15017362 + 183 NA intron (NM_004660, intron 1 of 16) CpG 375 NM_004660 8653 Hs.99120 NM_004660 HPRD:02452 DDX3Y DBY DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked protein-coding 0.055652 0.517361 198(TGGCGGCT,+,0.00) 112(CACGTACG,+,0.00) -43(CCTACCGA,+,0.00) 265(GGCGGGGG,+,0.00) 287(CAAAAGCG,+,0.00) 223(CGTGGAGACGCG,+,0.00) 289(AAAGCGGACC,-,0.00) 193(CGCAATGGCGGC,-,0.00) 561_WT_peak_501 chr1 149859861 149860273 + 183 NA promoter-TSS (NM_175065) promoter-TSS (NM_175065) -601 NM_175065 317772 Hs.664173 NM_175065 HPRD:13659 HIST2H2AB H2AB histone cluster 2, H2ab protein-coding 0.048544 0.530266 561_WT_peak_5044 chr3 28390081 28390650 + 183 NA 5' UTR (NM_001134432, exon 1 of 7) 5' UTR (NM_001134432, exon 1 of 7) 253 NM_001134433 64343 Hs.706676 NM_022461 HPRD:10577 AZI2 AZ2|NAP1|TILP 5-azacytidine induced 2 protein-coding 0.110721 0.673684 -87(CGGACCGAAAAC,+,0.00) -121(GGCCGCCGAG,+,0.00) 256(TCGGCGCC,+,0.00) 235(GGGCTGCCGCTG,-,0.00) -87(CGGACCGA,+,0.00),329(TCGGTCGT,-,0.00) 41(CGGCAGGA,-,0.00) 172(CGGAGGGAGGGG,+,0.00) 315(TAGCGAAG,-,0.00) 300(GAGCTGGGAGGG,-,0.00) 96(GGCCGACG,-,0.00) -48(GCTTCCGGTTTC,-,0.00),277(GAAACCGGAAGT,+,0.00) 10(CGTCGCGG,+,0.00) -129(GCCCCCAAGGCC,+,0.00),258(GGCGCCAGGGAC,+,0.00) 561_WT_peak_5891 chr5 127418515 127418851 + 183 NA promoter-TSS (NM_001046) promoter-TSS (NM_001046) 83 NR_015360 644873 Hs.340623 NR_015360 ENSG00000245937 LINC01184 - long intergenic non-protein coding RNA 1184 ncRNA 0.104167 0.670623 -107(CCTCCCTCCTCC,+,0.00) -89(AGGCCCGGAGTT,+,0.00),63(GGCTCCGGCCCG,-,0.00) 0(AAGCGGCT,+,0.00) 14(CCGACCGG,+,0.00) -13(CCCGCGGC,-,0.00) 58(CCTGCGGCTCCG,-,0.00) 65(CTCCGGCCCGGC,-,0.00) -11(CGCGGCTCCGGA,-,0.00) 561_WT_peak_2720 chr16 20956184 20956530 + 182 NA intron (NM_017539, intron 57 of 61) MER41B|LTR|ERV1 44282 NM_001128302 57149 Hs.745012 NM_020424 HPRD:14254 LYRM1 A211C6.1 LYR motif containing 1 protein-coding 0.008671 0.504323 -7(TGGGTAAA,+,0.00) 561_WT_peak_1494 chr11 117872290 117872874 + 182 NA TTS (NM_001558) TTS (NM_001558) 15476 NM_001558 3587 Hs.504035 NM_001558 HPRD:00911 IL10RA CD210|CD210a|CDW210A|HIL-10R|IL-10R1|IL10R interleukin 10 receptor, alpha protein-coding 0.008562 0.485470 561_WT_peak_4560 chr20 5730707 5730988 + 182 NA promoter-TSS (NM_152504) promoter-TSS (NM_152504) -196 NM_152504 149840 Hs.529340 NM_152504 HPRD:08681 C20orf196 - chromosome 20 open reading frame 196 protein-coding 0.032028 0.521277 19(AGCCACAT,-,0.00) -125(CCGTCTCAGCCT,+,0.00) 561_WT_peak_5936 chr5 137514008 137514538 + 182 NA promoter-TSS (NM_001164326) promoter-TSS (NM_001164326) 85 NM_001300966 10902 Hs.519337 NM_006696 HPRD:04166 BRD8 SMAP|SMAP2|p120 bromodomain containing 8 protein-coding 0.037736 0.517891 135(GGCCCCGAAGTC,+,0.00) 123(CGTCGCCA,+,0.00) 91(CAAAACCT,+,0.00) -144(TTAACCCG,-,0.00) 561_WT_peak_890 chr10 14227422 14227793 + 182 NA intron (NM_018027, intron 2 of 24) intron (NM_018027, intron 2 of 24) 111324 NR_120638 101928453 Hs.650212 NR_120638 LOC101928453 - uncharacterized LOC101928453 ncRNA 0.010782 0.411290 -46(GAAACATAAAGC,+,0.00),5(GAAACAGGTAGA,+,0.00) 561_WT_peak_5385 chr4 775229 775660 + 182 NA non-coding (NR_036511, exon 1 of 1) non-coding (NR_036511, exon 1 of 1) 192 NR_036512 100129917 Hs.731755 NR_036511 ENSG00000249592 LOC100129917 - uncharacterized LOC100129917 ncRNA 0.088167 0.701389 232(AGAGGCTT,-,0.00) -72(GGGGGAACGCGG,-,0.00) -150(CAGGGCCAGCCA,+,0.00),3(TGGCGCCAGCCC,+,0.00) 25(CGGGCAGGGA,-,0.00) 188(GCCGCGGG,+,0.00) 177(GGGAAGGTGCGG,+,0.00) 201(CGGCGGAC,+,0.00) 88(CACAACCG,+,0.00) 18(GCGGGGCCGGGC,+,0.00),101(GCGGGGCCAGGC,+,0.00),191(GCGGGGTGAGCG,+,0.00) 15(GCAGCGGGGC,+,0.00) 5(GCGCCAGCCCGC,-,0.00),137(CTGCCAGGCCCG,-,0.00) 561_WT_peak_2238 chr14 60715358 60715725 + 182 NA promoter-TSS (NM_177951) promoter-TSS (NM_177951) -425 NM_177951 5494 Hs.130036 NM_021003 HPRD:16199 PPM1A PP2C-ALPHA|PP2CA|PP2Calpha protein phosphatase, Mg2+/Mn2+ dependent, 1A protein-coding 0.089918 0.668478 1(GCTTCCGAGTCC,-,0.00) 155(GGCCTGGTGCTC,-,0.00) -18(CGCGGACG,+,0.00) 29(CGGCACGG,-,0.00) 144(CCTTCGGCTTCG,-,0.00) 86(CCCTGGCGCCGG,-,0.00) -138(CCGCGACG,-,0.00) 84(GTCCCTGGCGCC,-,0.00) -146(CGGCCAGACCGC,-,0.00),111(GGGTCCTGGCTG,+,0.00) 561_WT_peak_2881 chr16 69373043 69373622 + 181 NA promoter-TSS (NM_001199434) promoter-TSS (NM_001199434) -83 NM_016101 51388 Hs.585728 NM_016101 HPRD:16709 NIP7 HSPC031|KD93 NIP7, nucleolar pre-rRNA processing protein protein-coding 0.113990 0.658621 -91(GGCGGCCGAG,+,0.00) -82(GCGACGCC,+,0.00),-35(TCGGCGCC,+,0.00),161(GCGACGCC,+,0.00) 54(GGGCTCGCGCCG,-,0.00),69(CCGCTCCAGCCC,+,0.00) -86(CCGAGCGA,+,0.00) 58(TCGCGCCG,+,0.00),115(TCGGGCCG,+,0.00) 97(CGGAGGTAGCGG,+,0.00) -84(GAGCGACG,-,0.00),-70(CGTCGCCA,+,0.00),-7(TAGCGAAG,-,0.00),159(CAGCGACG,-,0.00),213(CGTGGCTA,+,0.00) -136(CGTCGCAC,+,0.00) 55(GGCTCGCGCCGC,-,0.00) -36(CTCGGCGCCGCG,+,0.00),-36(CTCGGCGCCGCG,-,0.00) 60(GCGCCGCAGC,-,0.00) 561_WT_peak_3198 chr17 42298426 42298718 + 181 NA promoter-TSS (NM_001076683) promoter-TSS (NM_001076683) -322 NM_001076683 7343 Hs.89781 NM_014233 HPRD:02814 UBTF NOR-90|UBF|UBF-1|UBF1|UBF2 upstream binding transcription factor, RNA polymerase I protein-coding 0.078767 0.587031 -10(CCGGGAGGGCTA,-,0.00) 18(GGGCTGGAGCCG,-,0.00) 78(CGTGTACG,+,0.00) -19(GCGGAGCCGCCG,+,0.00) -20(TGCGGAGCCGCC,+,0.00) -22(CCTGCGGAGC,+,0.00),56(GCTCTGCAGC,-,0.00) 561_WT_peak_1175 chr11 189706 190224 + 181 NA Intergenic TAR1|Satellite|telo -3115 NM_001097610 653486 Hs.127059 NM_001097610 LOC653486 - secretoglobin, family 1C, member 1-like protein-coding 0.054054 0.664740 -100(AGCGACTA,-,0.00) 244(CCCGTACG,+,0.00),246(CGTACGCC,-,0.00),307(CGTACGCC,-,0.00) 1(CGGCACGC,-,0.00),149(GGGCACGA,-,0.00),185(CAGCACGA,-,0.00) -101(TAGCGACT,-,0.00),23(TAGGGACG,-,0.00) 304(CGTCGTAC,+,0.00) 561_WT_peak_5593 chr4 129731166 129731558 + 181 NA 5' UTR (NM_001287439, exon 1 of 11) 5' UTR (NM_001287439, exon 1 of 11) 288 NM_001287440 79960 Hs.12420 NM_024900 HPRD:10151 JADE1 PHF17 jade family PHD finger 1 protein-coding 0.045918 0.458015 -15(CGAGGAGGGAGG,-,0.00),62(GGAGGAGGAGGA,-,0.00) -88(AGGTCGCT,+,0.00) 52(GGCGGGGG,+,0.00) -18(TAGCGAGG,-,0.00) -136(TGGTTTTG,-,0.00),202(CGGTTTTC,-,0.00) 55(GGGGGCCGGAGG,+,0.00) 561_WT_peak_4031 chr2 38977818 38978570 + 181 NA intron (NM_001031684, intron 1 of 7) CpG 442 NM_001031684 6432 Hs.309090 NM_006276 HPRD:08991 SRSF7 9G8|AAG3|SFRS7 serine/arginine-rich splicing factor 7 protein-coding 0.094415 0.596282 87(GGGGGAGGGGGG,-,0.00) -135(AGCCGCCA,-,0.00),276(AGCCGCCA,-,0.00) 287(CGCACGCG,-,0.00) 81(GGCGGGGG,+,0.00) 513(CGGCACTA,-,0.00) 243(CCGCTGCCTCCG,-,0.00) 128(GAAAACCG,+,0.00) -94(TTTAACCG,-,0.00),492(TTCACCCG,-,0.00) 226(CCTTCAGCACCC,-,0.00) 93(GGGGGGCCGGCG,+,0.00) 497(CCGCCAAG,-,0.00) 561_WT_peak_6066 chr5 180688367 180688817 + 181 NA promoter-TSS (NM_032765) promoter-TSS (NM_032765) 379 NR_102759 100507602 Hs.126768 NR_102759 ENSG00000248275 TRIM52-AS1 - TRIM52 antisense RNA 1 (head to head) ncRNA 0.086667 0.713969 183(GGATCCGGGGCG,-,0.00) 110(CGTCCGCG,-,0.00) -140(CGGCGGAC,+,0.00),224(CGTCGGGC,+,0.00) 107(CGCCGTCCGCGC,-,0.00),274(GCGGGGCCGCGG,+,0.00) 273(TGCGGGGCCGCG,+,0.00) 28(AGCCCCGCCC,-,0.00),44(GGGCCGAGTT,+,0.00) 561_WT_peak_5433 chr4 26199105 26199335 + 181 NA Intergenic Intergenic -122112 NM_203283 3516 Hs.479396 NM_005349 HPRD:00920 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding 0.021739 0.502165 0(CGGCAAGA,-,0.00) 561_WT_peak_7268 chr9 44401978 44402468 + 181 NA Intergenic Intergenic 17638 NR_121564 101927827 Hs.738704 NR_121564 ENSG00000229311 LOC101927827 - uncharacterized LOC101927827 ncRNA 0.075510 0.639511 -62(CGCGTGCG,+,0.00) -130(CGCCCGGC,-,0.00),318(GCCGGGCG,+,0.00) -126(CGGCACGC,-,0.00) -3(TGGTTTTG,-,0.00) -54(CAGGTAAA,+,0.00) -81(TGCGCGGA,-,0.00) 309(GCAGCCCTGGCC,+,0.00) -69(GCTGCGACGC,+,0.00) 561_WT_peak_1 chr1 10044 10433 + 181 NA Intergenic (CCCTAA)n|Simple_repeat|Simple_repeat -1636 NR_046018 100287102 Hs.618434 NR_046018 DDX11L1 - DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 like 1 pseudo 0.000000 0.517949 561_WT_peak_2223 chr14 55658407 55658660 + 180 NA promoter-TSS (NM_014750) promoter-TSS (NM_014750) -137 NM_014750 9787 Hs.77695 NM_014750 HPRD:06490 DLGAP5 DLG7|HURP discs, large (Drosophila) homolog-associated protein 5 protein-coding 0.051383 0.551181 -90(GGGATGAGAAGG,-,0.00) -36(TGGGCGGT,-,0.00) -99(CCGCGACG,-,0.00),-96(CGACGCGG,+,0.00) 561_WT_peak_2295 chr14 75642693 75643368 + 180 NA intron (NM_006827, intron 1 of 4) CpG 319 NM_006827 10972 Hs.74137 NM_006827 HPRD:12013 TMED10 P24(DELTA)|S31I125|S31III125|TMP21|Tmp-21-I|p23 transmembrane emp24-like trafficking protein 10 (yeast) protein-coding 0.074074 0.618343 205(AGGTGGCT,+,0.00) 166(CTTCCCTCCCGG,+,0.00) 249(CTCGTACG,+,0.00),251(CGTACGCG,-,0.00) 172(TCCCGGCCCC,+,0.00) 118(CGGCCCGA,-,0.00) -21(GCCTCGCAGCCC,+,0.00),46(GGGGTGAGGGGG,-,0.00),169(CCCTCCCGGCCC,+,0.00) -80(CAAAACTG,+,0.00) 210(GCTGCGCA,+,0.00),390(GCCGCGCC,+,0.00),460(ACCGCGCC,+,0.00) 388(GGGCCGCGCC,+,0.00) 219(GCCGCCAGCGCC,+,0.00) -21(GCCTCGCAGC,-,0.00) 561_WT_peak_3656 chr19 14550774 14551093 + 180 NA promoter-TSS (NM_213560) promoter-TSS (NM_213560) -153 NM_213560 5585 Hs.466044 NM_002741 HPRD:03019 PKN1 DBK|PAK-1|PAK1|PKN|PKN-ALPHA|PRK1|PRKCL1 protein kinase N1 protein-coding 0.021944 0.565625 132(GGAAGAGGGCGG,-,0.00) 98(GGCAGCCGAG,+,0.00) 137(AGGGCGGGGC,-,0.00) 86(GAAAGAGGAAGT,+,0.00) 50(AGTTGGCCCCGC,-,0.00) 561_WT_peak_1574 chr12 8234383 8235082 + 180 NA promoter-TSS (NR_024260) promoter-TSS (NR_024260) -75 NR_024260 25977 Hs.555927 NM_015509 HPRD:14819 NECAP1 EIEE21 NECAP endocytosis associated 1 protein-coding 0.074392 0.551429 340(GGCGACCGAG,+,0.00) 460(CGCGTACT,+,0.00) 341(GCGACCGA,+,0.00) 309(CCCCCGGC,-,0.00) -6(CGTCACGA,-,0.00) 22(CGTAGGAC,+,0.00) 561_WT_peak_513 chr1 150336088 150336440 + 180 NA promoter-TSS (NM_015203) promoter-TSS (NM_015203) -323 NM_015203 23248 Hs.213666 NM_015203 ENSG00000163125 RPRD2 KIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding 0.045455 0.558074 86(AGGGCGGGGC,-,0.00) -80(TGGTGCCG,+,0.00) -143(CGGTTTGG,-,0.00) 89(GCGGGGCAGGGG,+,0.00) -21(GGCGATGGCTGC,-,0.00) 561_WT_peak_2732 chr16 22206937 22207239 + 180 NA Intergenic tRNA-Leu-CTA|tRNA|tRNA -10504 NM_013302 29904 Hs.498892 NM_013302 EEF2K HSU93850|eEF-2K eukaryotic elongation factor-2 kinase protein-coding 0.056291 0.514851 63(GCCCCGCCCT,+,0.00) 561_WT_peak_1427 chr11 81580707 81581067 + 179 NA Intergenic LTR43B|LTR|ERV1 20991 NR_036186 100422823 NR_036186 miRBase:MI0015831 MIR4300 - microRNA 4300 ncRNA 0.000000 0.393352 561_WT_peak_224-2 chr1 46153610 46153892 + 179 NA promoter-TSS (NM_016486) promoter-TSS (NM_016486) -96 NM_016486 51249 Hs.699548 NM_016486 TMEM69 C1orf154 transmembrane protein 69 protein-coding 0.021277 0.505300 -124(CTTACCCG,-,0.00) -21(CAAACAGAAAGC,+,0.00) 561_WT_peak_224 chr1 46152505 46153386 + 179 NA promoter-TSS (NM_021639) promoter-TSS (NM_021639) -643 NM_021639 60313 Hs.238432 NM_021639 HPRD:15418 GPBP1L1 SP192 GC-rich promoter binding protein 1-like 1 protein-coding 0.060159 0.569161 120(GGCCCCGGAGGC,+,0.00),219(GATTCCGGCGAG,-,0.00) -100(CGCGTATG,+,0.00) -39(GCCCGCCCCT,+,0.00),38(TTCCGGCCCT,+,0.00) 197(CCCCCGCC,-,0.00) 392(CGGCACGG,-,0.00) 142(CGTCGGCC,+,0.00) 16(CGGTTTCG,-,0.00),404(CTAAACCG,+,0.00) 54(CCTTCCGCTCCT,-,0.00) 424(CAACCAGGAAGC,+,0.00) 132(TGCGCGGC,-,0.00) 116(GCCTGGCCCCGG,-,0.00) 297(GGGCGGCGCT,+,0.00) 130(GCTGCGCGGC,+,0.00) 114(CGGCCTGGCCCC,-,0.00) 561_WT_peak_5951 chr5 138940317 138940695 + 178 NA promoter-TSS (NM_003339) promoter-TSS (NM_003339) -245 NM_003339 7322 Hs.108332 NM_003339 HPRD:04268 UBE2D2 E2(17)KB2|PUBC1|UBC4|UBC4/5|UBCH4|UBCH5B ubiquitin-conjugating enzyme E2D 2 protein-coding 0.050265 0.554090 -57(AGCGGCTA,-,0.00) 96(CCTCCTCCCGGG,+,0.00) -15(TAGCCACG,-,0.00) 561_WT_peak_3339 chr17 73257305 73257704 + 178 NA promoter-TSS (NM_015971) promoter-TSS (NM_015971) 238 NM_014001 23163 Hs.87726 NM_014001 HPRD:10443 GGA3 - golgi-associated, gamma adaptin ear containing, ARF binding protein 3 protein-coding 0.115288 0.712500 186(TCCGCCTCCGCC,+,0.00) 82(CCGGGGAGGGGA,-,0.00) 67(GCGACGCC,+,0.00) 208(CGCCCGGC,-,0.00),216(CCCGCGGC,-,0.00) 122(CGGCTCGA,-,0.00) -113(TTTCCCCG,-,0.00) 209(GCCCGGCCCCGC,-,0.00) 210(CCCGGCCCCGCG,-,0.00) -46(GCGCCGCAGC,-,0.00),214(GCCCCGCGGC,-,0.00) 561_WT_peak_4483 chr2 227655875 227656354 + 178 NA intron (NM_005544, intron 1 of 1) CpG 7392 NM_005544 3667 Hs.471508 NM_005544 HPRD:00943 IRS1 HIRS-1 insulin receptor substrate 1 protein-coding 0.073069 0.612500 -159(TCCCCCTCCCCC,+,0.00) 124(GTTTCCGGCCCC,-,0.00) 214(TCAGTCGG,-,0.00) 4(GGAAGACGAAGG,+,0.00) 224(GGCGCGGT,-,0.00) 297(AAAGCGGCCC,-,0.00) 561_WT_peak_3545 chr19 506624 506990 + 178 NA promoter-TSS (NM_033513) promoter-TSS (NM_033513) -690 NM_033513 91978 Hs.369613 NM_033513 HPRD:12701 TPGS1 C19orf20|GTRGEO22|PGs1 tubulin polyglutamylase complex subunit 1 protein-coding 0.060109 0.662125 -101(AGGCGGCT,+,0.00),-68(AGGTGGCT,+,0.00) -36(CCGGGAGGGCGG,-,0.00) -40(AGGGCCGGGA,-,0.00) -48(GGGTTGGGAGGG,-,0.00),-39(GGGCCGGGAGGG,-,0.00) -56(GCTGCGGAGG,+,0.00),151(GCAGCGGAGC,+,0.00) 561_WT_peak_6494 chr6 139695422 139696108 + 178 NA promoter-TSS (NM_001168389) promoter-TSS (NM_001168389) 22 NM_006079 10370 Hs.82071 NM_006079 HPRD:04245 CITED2 ASD8|MRG-1|MRG1|P35SRJ|VSD2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding 0.102041 0.668122 326(CCGCGTCCCCGC,+,0.00) 82(TCGGCGCC,+,0.00),84(GGCGCCGA,-,0.00) -68(GAGCCCCAGCCA,+,0.00) 484(CCGCCCGA,+,0.00) 416(TCCCGGCCCA,+,0.00) 172(CGCCCGGC,-,0.00),340(CCCGCGGC,-,0.00) 163(CGGCAGGA,-,0.00),344(CGGCACGT,-,0.00) 510(TAGCCACG,-,0.00) 152(CCCTCACAGCTC,+,0.00) -32(CGTTTTTG,-,0.00) -104(CGGGCAAA,+,0.00) 377(GCCGCCCA,+,0.00) 245(GCGGAGCGAGAG,+,0.00),364(GCGGGGCCCGGG,+,0.00) 319(CCCGGAGCCGCG,+,0.00) 267(GGGCGGCGCC,+,0.00) 24(GCTCAGCAGC,-,0.00),361(GCTGCGGGGC,+,0.00) 561_WT_peak_1052 chr10 75503122 75503388 + 178 NA promoter-TSS (NM_198597) promoter-TSS (NM_198597) -876 NM_198597 9632 Hs.81964 NM_004922 HPRD:06217 SEC24C - SEC24 family member C protein-coding 0.011278 0.400749 561_WT_peak_3621 chr19 10765019 10765369 + 178 NA promoter-TSS (NR_024333) promoter-TSS (NR_024333) 257 NM_004516 3609 Hs.465885 NM_004516 HPRD:04420 ILF3 CBTF|DRBF|DRBP76|MMP4|MPHOSPH4|MPP4|NF-AT-90|NF110|NF110b|NF90|NF90a|NF90b|NFAR|NFAR-1|NFAR2|TCP110|TCP80 interleukin enhancer binding factor 3, 90kDa protein-coding 0.117143 0.726496 -159(TCCTCCTCCTCC,+,0.00),-69(GCAGGAGGGCGG,-,0.00) -2(GGCGGCCGGG,+,0.00) 97(TCGCCGCC,+,0.00) 30(CCCCCGCC,-,0.00) -61(GCGGCGGCGGCG,+,0.00),1(GGCCGGGCCCGC,-,0.00) -27(CCGACAAG,-,0.00) 561_WT_peak_3562 chr19 1848463 1848878 + 178 NA promoter-TSS (NM_020695) promoter-TSS (NM_020695) -218 NM_020695 57455 Hs.192477 NM_020695 HPRD:15478 REXO1 ELOABP1|EloA-BP1|REX1|TCEB3BP1 REX1, RNA exonuclease 1 homolog (S. cerevisiae) protein-coding 0.098795 0.692308 -3(GGGCAGGGGCTG,-,0.00),81(GAGCCCCAGGCC,+,0.00) 45(CCGCCCGA,+,0.00) -39(TGGGCCGGGA,-,0.00) -23(GCCGCGGG,+,0.00) 66(TAGCGGCG,-,0.00) 96(GCGGCGCCAGGG,+,0.00),139(CGCGGGGCCCGC,-,0.00),140(GCGGGGCCCGCT,+,0.00) 98(GGCGCCAGGGCT,+,0.00) 39(GCGCCGCCGC,-,0.00) 561_WT_peak_3479 chr18 32610060 32610234 + 178 NA intron (NM_001143827, intron 2 of 7) intron (NM_001143827, intron 2 of 7) -11177 NM_014268 10982 Hs.532824 NM_014268 HPRD:16157 MAPRE2 EB1|EB2|RP1 microtubule-associated protein, RP/EB family, member 2 protein-coding 0.000000 0.462857 -138(CCTCCTTCCCCC,+,0.00) -8(GTCTCTCAGCCC,+,0.00) 561_WT_peak_1052-2 chr10 75503532 75504057 + 178 NA promoter-TSS (NM_198597) promoter-TSS (NM_198597) -337 NM_198597 9632 Hs.81964 NM_004922 HPRD:06217 SEC24C - SEC24 family member C protein-coding 0.034286 0.477186 339(GCATCCGGGTCC,-,0.00) -94(AGCGGCCT,-,0.00) 333(TGCGCGGC,-,0.00) 561_WT_peak_6918 chr7 157094935 157095451 + 178 NA Intergenic Intergenic -34517 NM_005494 10049 Hs.490745 NM_005494 HPRD:07107 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|MRJ|MSJ-1 DnaJ (Hsp40) homolog, subfamily B, member 6 protein-coding 0.029070 0.522244 -109(GGCGTCTA,-,0.00) -42(GGGGCCTGTCTG,+,0.00) 561_WT_peak_2470 chr15 45929873 45930077 + 178 NA intron (NM_021199, intron 1 of 9) intron (NM_021199, intron 1 of 9) 3037 NM_021199 58472 Hs.511251 NM_021199 HPRD:18102 SQRDL PRO1975 sulfide quinone reductase-like (yeast) protein-coding 0.019608 0.414634 561_WT_peak_3078 chr17 21191185 21191622 + 178 NA promoter-TSS (NM_002756) promoter-TSS (NM_002756) 55 NM_002756 5606 Hs.514012 NM_002756 HPRD:03816 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding 0.034325 0.666667 246(GGGCAGGCCCTC,-,0.00) 253(CCCTCTGTGCCC,+,0.00) 222(CCTCGGAC,+,0.00) 30(GCCGGGGCAGCG,+,0.00) 561_WT_peak_4973 chr22 50714659 50714891 + 178 NA intron (NM_012401, intron 35 of 36) intron (NM_012401, intron 35 of 36) -5953 NM_002751 5600 Hs.57732 NM_002751 HPRD:04208 MAPK11 P38B|P38BETA2|PRKM11|SAPK2|SAPK2B|p38-2|p38Beta mitogen-activated protein kinase 11 protein-coding 0.077586 0.763948 -159(TGGAGCCGCAGG,+,0.00),-79(TGGAGCCGCAGG,+,0.00) 561_WT_peak_7490 chr9 141021071 141021444 + 178 NA Intergenic TAR1|Satellite|telo -23308 NR_027156 643224 Hs.551805 NR_027156 TUBBP5 - tubulin, beta pseudogene 5 pseudo 0.067024 0.727273 -137(CCCGGCCGCC,-,0.00),-77(CCCGGCCGCC,-,0.00),-17(CCCGGCCGCC,-,0.00),43(CCCGGCCGCC,-,0.00),104(CCCGGCCGCC,-,0.00),164(CCCGGCCGCC,-,0.00) -139(CCCCCGGC,-,0.00),102(CCCCCGGC,-,0.00) 561_WT_peak_507 chr1 150208198 150208558 + 178 NA 5' UTR (NM_001136478, exon 1 of 6) 5' UTR (NM_001136478, exon 1 of 6) 126 NM_030920 81611 Hs.656466 NM_030920 HPRD:16493 ANP32E LANP-L|LANPL acidic (leucine-rich) nuclear phosphoprotein 32 family, member E protein-coding 0.041667 0.518006 19(CGCACGCG,-,0.00) 561_WT_peak_2052 chr13 50571175 50571718 + 178 NA promoter-TSS (NR_037407) promoter-TSS (NR_037407) 303 NM_052811 10206 Hs.436922 NM_005798 HPRD:10414 TRIM13 CAR|DLEU5|LEU5|RFP2|RNF77 tripartite motif containing 13 protein-coding 0.084715 0.656250 119(AGCGGCCT,-,0.00) 70(CCGGCAGCGCGG,-,0.00) -136(CGCGTACC,+,0.00) -52(CGCCCGGC,-,0.00),282(GCCGGGGG,+,0.00) 112(GGGGAGGAGCGG,+,0.00) 185(TCCTGGCCCCGC,-,0.00),256(GCGCCGCCAGCG,+,0.00) 302(CCGAGAAG,-,0.00) 561_WT_peak_3546 chr19 507257 508070 + 177 NA exon (NM_033513, exon 1 of 2) exon (NM_033513, exon 1 of 2) 166 NM_033513 91978 Hs.369613 NM_033513 HPRD:12701 TPGS1 C19orf20|GTRGEO22|PGs1 tubulin polyglutamylase complex subunit 1 protein-coding 0.093481 0.668305 -16(GATACCGGTGCC,-,0.00),58(GCTTCCGGTCCC,-,0.00) 175(GGCGGCCGAG,+,0.00) 307(GGGCCTGCGCTC,-,0.00) 602(TCGGTCCG,-,0.00) 169(GGCGGGGG,+,0.00) 260(CGGCCCGA,-,0.00),632(CGGCGCGA,-,0.00) 608(CGGCGCTA,+,0.00) 605(GTCCGGCG,-,0.00) 256(GGCGCGGC,-,0.00),425(TGCGCAGT,-,0.00) 170(GCGGGGGCGGCC,+,0.00),330(GCGGCGCCGGGG,+,0.00),502(GCAGCGCCGGCG,+,0.00) 256(GGCGCGGCCC,-,0.00) 16(GCCGCCTTGGGG,+,0.00) 233(GCGGCCCTGCTG,+,0.00) 561_WT_peak_1253 chr11 35684294 35684918 + 177 NA 5' UTR (NM_017583, exon 1 of 5) 5' UTR (NM_017583, exon 1 of 5) 253 NM_017583 54765 Hs.192103 NM_017583 TRIM44 DIPB|HSA249128|MC7 tripartite motif containing 44 protein-coding 0.123397 0.734400 -8(GGAGCAGGCCGA,-,0.00) 282(GGGGGCCGAG,+,0.00) 306(ATGCGGCT,+,0.00) 153(GGCGGCGA,-,0.00) 35(GGGCAGGGGCTG,-,0.00),41(GGGCTGCCGCGG,-,0.00) -91(CGGCGCGA,-,0.00),246(CGGCACGT,-,0.00) 434(AGGAAGAAGCGG,+,0.00) -103(AGGCTGAGCGGG,-,0.00) -77(GGCCGACG,-,0.00),267(GCCCGACG,-,0.00) -80(GGGGGCCGACGG,+,0.00) -56(GCCGCGCC,+,0.00),-38(TGCGCGGC,-,0.00),76(GGCGCGGT,-,0.00),217(GGCGCGGC,-,0.00) -143(CGGGGGCCGGCG,+,0.00),-1(GCCGAGCCGGCG,+,0.00) 273(CGAGGCTCCGGG,-,0.00) -86(CGACGCGG,+,0.00) 176(GGCCTTGGCCGC,-,0.00),326(GCCGCCATGCCG,+,0.00) 561_WT_peak_1007 chr10 64143843 64144197 + 177 NA intron (NM_199450, intron 2 of 4) intron (NM_199450, intron 2 of 4) -9134 NR_104162 283045 NR_104162 LOC283045 - uncharacterized LOC283045 ncRNA 0.014124 0.388732 -95(AAGTGGCT,+,0.00) 561_WT_peak_2147 chr14 24682071 24682694 + 177 NA TTS (NM_138476) TTS (NM_138476) 654 NM_014169 29082 Hs.279761 NM_014169 HPRD:16597 CHMP4A C14orf123|CHMP4|CHMP4B|HSPC134|SHAX2|SNF7|SNF7-1|VPS32-1|VPS32A charged multivesicular body protein 4A protein-coding 0.062600 0.597756 162(GGAGGACGGCGG,-,0.00),426(CCCGCCTCCGCC,+,0.00) 236(ATCGGCCGCC,-,0.00) 301(CCGGCCGA,+,0.00) 94(CAGCACGA,-,0.00) -145(TAGAGACG,-,0.00) -34(GGGCTAAGAAGG,-,0.00) -81(CGTCGGCC,+,0.00),168(CGGCGGAC,+,0.00) 34(AGGTTTTG,-,0.00) 347(GCCTCCTGGCTG,+,0.00) 561_WT_peak_5279 chr3 141271942 141272302 + 177 NA intron (NM_006506, intron 5 of 23) intron (NM_006506, intron 5 of 23) 66196 NM_006506 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding 0.002778 0.354571 40(CAGTTTTG,-,0.00),141(CTGTTTTG,-,0.00) 561_WT_peak_1060 chr10 75935978 75936690 + 177 NA promoter-TSS (NM_001202449) promoter-TSS (NM_001202449) 87 NM_001202449 132 Hs.656586 NM_001123 HPRD:00039 ADK AK adenosine kinase protein-coding 0.087079 0.633941 473(GCAGGAGGGCGA,-,0.00) 301(CCGCCTTCCCTC,+,0.00) 295(GAGCGCCCGCCT,+,0.00) 449(CGGACGCG,-,0.00) -115(TCGTGCTG,+,0.00),232(TGGCACGA,-,0.00) 446(CATCGGAC,+,0.00) 84(CTAAACCG,+,0.00) 101(GGCGCGGC,-,0.00),189(ACCGCGCC,+,0.00) 322(CGCCGGGCCGGC,-,0.00) 251(GCCCACGGCGTC,-,0.00),457(GGCGCCGTGGCG,+,0.00) 396(GCCGGGAAGC,+,0.00) 561_WT_peak_106 chr1 24718596 24719011 + 177 NA intron (NM_001199014, intron 2 of 9) intron (NM_001199014, intron 2 of 9) 21459 NM_001199013 90529 Hs.403187 NM_178122 HPRD:14273 STPG1 C1orf201|MAPO2 sperm-tail PG-rich repeat containing 1 protein-coding 0.007229 0.475962 207(AAGCGGAT,+,0.00) -140(GGGCTGGCTCTC,-,0.00) -86(CTGTTTTG,-,0.00) 561_WT_peak_3200 chr17 42580297 42580802 + 177 NA intron (NM_001002909, intron 1 of 7) CpG 408 NM_001002909 23131 Hs.463129 NM_001002909 GPATCH8 GPATC8|KIAA0553 G patch domain containing 8 protein-coding 0.075248 0.636364 308(CTCTCCGGTTCG,-,0.00) 82(AGGCCTCT,+,0.00) 196(GCGCCTTCCCCG,+,0.00) 216(GCGACGCC,+,0.00) -97(GGGAGCCAGCCC,+,0.00) 154(AGGGCTGGGA,-,0.00) 15(CCCGCGGC,-,0.00) 258(CGGGAGAAGCGG,+,0.00) -134(CCCTCTCAGCCC,+,0.00) 137(CAAAACTG,+,0.00) 228(TTTACCTG,-,0.00) 160(GGGAGCCGGAGA,+,0.00) 8(CGCAAGCCCCGC,-,0.00) 13(GCCCCGCGGC,-,0.00) 561_WT_peak_4469 chr2 219134995 219135314 + 177 NA promoter-TSS (NM_015488) promoter-TSS (NM_015488) 39 NM_001077399 25953 Hs.98475 NM_015488 HPRD:11369 PNKD BRP17|DYT8|FPD1|KIPP1184|MR-1|MR1|PDC|PKND1|TAHCCP2 paroxysmal nonkinesigenic dyskinesia protein-coding 0.090909 0.665625 -164(AGCGGCAT,-,0.00) 65(CGGGGAGCGCGG,-,0.00) 131(AGGGCCGGGG,-,0.00) 134(GCCGGGGG,+,0.00) 21(CGGAAGGAGCGG,+,0.00) -68(CGCGCCTCCGGG,-,0.00) -120(AACTCCGCCC,-,0.00),-105(GACTCCGCCC,-,0.00) -138(CGTGGCGG,+,0.00) 96(GAACATGGCGGC,-,0.00) 561_WT_peak_1459 chr11 94884224 94884884 + 177 NA non-coding (NR_110303, exon 1 of 3) non-coding (NR_110303, exon 1 of 3) 851 NR_110303 101929295 Hs.735838 NR_110303 ENSG00000245552 LOC101929295 - uncharacterized LOC101929295 ncRNA 0.074242 0.639939 421(CCGCCCTCCTCC,+,0.00) 343(CTCGGGCGCC,-,0.00) 15(AGCGGCCT,-,0.00) 216(GGCGTCGG,-,0.00) -107(TCGGTGGG,-,0.00) -6(GCCGGGCG,+,0.00) -40(CCTCGGAC,+,0.00),218(CGTCGGAG,+,0.00),261(CGGCGGAC,+,0.00) 453(TTCACCCG,-,0.00) -29(TGCGCGGG,-,0.00),50(TGGGCGGT,-,0.00) 561_WT_peak_3084 chr17 25621005 25621531 + 177 NA promoter-TSS (NR_039748) promoter-TSS (NR_039748) 162 NM_134265 26118 Hs.446017 NM_015626 HPRD:15680 WSB1 SWIP1|WSB-1 WD repeat and SOCS box containing 1 protein-coding 0.095057 0.666034 -111(GGCGGGGG,+,0.00),124(CCCCCGCC,-,0.00) -81(GCCGCGCC,+,0.00),-70(GCCGCCCA,+,0.00) -146(GCCGGGCCGGGG,+,0.00),-57(CTCCGGCGCCGC,-,0.00),119(GGCCGCCCCCGC,-,0.00),144(CCCTGGGCCCGG,-,0.00) -53(GGCGCCGCCC,-,0.00) 561_WT_peak_281 chr1 67769832 67770088 + 177 NA Intergenic Intergenic -3087 NR_047584 3595 Hs.479347 NM_001559 HPRD:03383 IL12RB2 - interleukin 12 receptor, beta 2 protein-coding 0.003906 0.322957 561_WT_peak_1682 chr12 49454177 49454596 + 177 NA Intergenic CpG -5279 NM_003482 8085 Hs.731384 NM_003482 HPRD:03664 KMT2D AAD10|ALR|CAGL114|KABUK1|KMS|MLL2|MLL4|TNRC21 lysine (K)-specific methyltransferase 2D protein-coding 0.085919 0.688095 39(CCCCCCTCCGCC,+,0.00) -94(GGCGGCCTAG,+,0.00) -161(CCCCGCCCCCGG,+,0.00),32(CCGCCTCCCCCC,+,0.00) -120(TCGACCCC,+,0.00) 57(TCGGCCGG,-,0.00) -156(CCCCCGGC,-,0.00),-116(CCCCCGGC,-,0.00) 139(CGGCGCTA,+,0.00) 162(TTTGCCCG,-,0.00) 20(CGCGGCGCCGCT,+,0.00),20(CGCGGCGCCGCT,-,0.00),25(CGCCGCTCCGCC,-,0.00),226(AGCGGAGCGGCG,+,0.00) -153(CCGGCCTGGCCG,+,0.00) 561_WT_peak_6599 chr7 17274034 17274307 + 177 NA Intergenic Intergenic -64106 NM_001621 196 Hs.171189 NM_001621 HPRD:02596 AHR bHLHe76 aryl hydrocarbon receptor protein-coding 0.029304 0.397810 561_WT_peak_5861 chr5 98264897 98265422 + 177 NA non-coding (NR_036530, exon 1 of 1) non-coding (NR_036530, exon 1 of 1) 321 NR_036530 100289230 Hs.552095 NR_036530 LOC100289230 - uncharacterized LOC100289230 ncRNA 0.095238 0.657795 349(ATGCCGCT,+,0.00) -80(CCGGGAAGTGGG,-,0.00),66(CCGGGAAGGGCC,-,0.00) -91(GGCGTTGA,-,0.00) 144(GAGCGCCAGGCC,+,0.00),165(GGGCGGGGGCTG,-,0.00) 137(TCAGTCGG,-,0.00) 166(GGCGGGGG,+,0.00) -1(CGGCGGAC,+,0.00) 299(GGGCGCCGGAGG,+,0.00) 73(GGGCCGCGCT,+,0.00),96(GGGCCGGGTC,+,0.00) -98(GCGGCCCGGCGT,+,0.00) 561_WT_peak_2519 chr15 66111284 66111588 + 177 NA Intergenic Intergenic -26805 NM_001144823 10260 Hs.654567 NM_005848 HPRD:02662 DENND4A IRLB|MYCPBP DENN/MADD domain containing 4A protein-coding 0.006579 0.347541 561_WT_peak_4665 chr20 47662863 47663256 + 177 NA promoter-TSS (NR_110624) promoter-TSS (NR_110624) 276 NR_045796 1434 Hs.90073 NM_001316 HPRD:03217 CSE1L CAS|CSE1|XPO2 CSE1 chromosome segregation 1-like (yeast) protein-coding 0.099237 0.692893 -137(CGGCAGGA,-,0.00) -137(CGGCAGGAGCGG,+,0.00) 171(GGCCTGTGAGGG,-,0.00) 96(TCTTCGGCTTCC,-,0.00) 34(ACCGCGCC,+,0.00),121(GCCGCGCC,+,0.00),197(GGCGCGGC,-,0.00) 116(CGCTTGCCGCGC,-,0.00) -147(GGCGGAGCGGCG,+,0.00) 126(GCCTCGCGGC,-,0.00) -26(GGGGCCCAGCTG,+,0.00) 561_WT_peak_3617 chr19 10443987 10444223 + 177 NA TTS (NM_002162) TTS (NM_002162) 209 NM_133452 125950 Hs.744952 NM_133452 HPRD:11484 RAVER1 - ribonucleoprotein, PTB-binding 1 protein-coding 0.122881 0.675105 -30(GACTTCGGCCCC,-,0.00) -36(GGCTTCGA,-,0.00) -60(CGCCCGGC,-,0.00) -11(GGGCTCAGCGGG,-,0.00) 21(GTCCGCCG,-,0.00) -56(CGGCGCTCCGCG,-,0.00) -52(GCTCCGCGGC,-,0.00) 561_WT_peak_2006 chr13 41593150 41593485 + 177 NA intron (NM_172373, intron 1 of 8) intron (NM_172373, intron 1 of 8) 191 NM_172373 1997 Hs.135646 NM_172373 HPRD:01808 ELF1 - E74-like factor 1 (ets domain transcription factor) protein-coding 0.005970 0.380952 101(CCGACAAG,-,0.00) 561_WT_peak_5341 chr3 183853025 183853423 + 177 NA exon (NM_003907, exon 1 of 16) exon (NM_003907, exon 1 of 16) 414 NM_003907 8893 Hs.283551 NM_003907 HPRD:04898 EIF2B5 CACH|CLE|EIF-2B|EIF2Bepsilon|LVWM eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa protein-coding 0.087940 0.656642 -154(AGACGCAT,-,0.00) 188(CGCGCACG,+,0.00),190(CGCACGCG,-,0.00) 50(GGGGCCGGGA,-,0.00),207(AGGGCAGGAA,-,0.00) 69(GGCGGGGG,+,0.00) 146(CCGCTTCTTCCC,-,0.00) 74(GGGAGCCAGAGG,+,0.00) 186(GCCGCGCA,+,0.00) 48(GCGGGGCCGGGA,+,0.00) 47(CGCGGGGCCGGG,+,0.00) 70(GCGGGGGAGC,+,0.00) 561_WT_peak_5920 chr5 133860442 133861469 + 177 NA promoter-TSS (NM_015288) promoter-TSS (NM_015288) -385 NM_001289985 23338 Hs.732155 NM_015288 HPRD:15124 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding 0.064265 0.597276 -85(GGAGGAGGGCCG,-,0.00) 467(GAGTCCGGGCCC,-,0.00) 642(AAGTGGCT,+,0.00) -89(GCGGGGAGGAGG,-,0.00),89(CCCGGGGGGCGG,-,0.00),667(CCTCCTGCCCGC,+,0.00) 595(GGCGGCGA,-,0.00) -55(CGCGTTCG,+,0.00),295(CGCGTAGG,+,0.00) 785(CCGACCGC,+,0.00) 418(GCCCGGCCCT,+,0.00) -127(CCCCCGCC,-,0.00),579(GGCGGGGG,+,0.00) 780(TGGTGCCG,+,0.00) 503(GGGCTGCGAGGG,-,0.00) -77(GCCGCGCC,+,0.00) 471(CCGGGCCCAGGG,+,0.00) -79(GGGCCGCGCC,+,0.00),275(GGCGCCGCCC,-,0.00) 505(GCTGCGAGGG,+,0.00) 561_WT_peak_2112 chr14 20811295 20811762 + 177 NA promoter-TSS (NM_005484) promoter-TSS (NM_005484) 42 NR_002312 85495 Hs.613102 NR_002312 ENSG00000259001 RPPH1 H1RNA|RPPH1-1 ribonuclease P RNA component H1 ncRNA 0.057816 0.600427 195(AGCGACAT,-,0.00) 258(CGCACGCG,-,0.00) 194(TAGCGACA,-,0.00) 232(CCCTCACAGCCA,+,0.00) 289(CACTGGGCCCGC,-,0.00) -50(CGCGGAGCCCCG,+,0.00) -89(GGGCGGGGTC,+,0.00) 278(CCGCCTAG,-,0.00) -109(CCGCCGGGCCCC,-,0.00),249(CTGCCAGGGCGC,-,0.00) 561_WT_peak_194 chr1 40562565 40562909 + 177 NA intron (NM_000310, intron 1 of 8) CpG 405 NM_001142604 5538 Hs.3873 NM_000310 HPRD:07203 PPT1 CLN1|INCL|PPT palmitoyl-protein thioesterase 1 protein-coding 0.063953 0.594203 172(GCGACGCC,+,0.00) 167(GCCGGGCG,+,0.00) -115(CGGCTCCTTCCC,-,0.00) -163(TGCGCGGC,-,0.00) 85(GCGGCGCCGGCG,+,0.00) 116(CCGAGAAG,-,0.00) 561_WT_peak_7502 chrX 12992999 12993611 + 177 NA promoter-TSS (NM_021109) promoter-TSS (NM_021109) 79 NM_021109 7114 Hs.437277 NM_021109 HPRD:02153 TMSB4X FX|PTMB4|TB4X|TMSB4 thymosin beta 4, X-linked protein-coding 0.073529 0.592170 239(CCGGGAAGGCTA,-,0.00) -82(GGGGTGGGGCTC,-,0.00) 103(CGTACTCG,-,0.00) 57(CCGCCCGA,+,0.00) 172(TCCCCGCCCT,+,0.00) -25(CGGCGCGA,-,0.00),153(TCCTGCCG,+,0.00),348(CCGTGCCG,+,0.00) 324(CAAAACCG,+,0.00) 387(TTTGCCCG,-,0.00) 81(ACTGCGCA,+,0.00) 167(CTCCGTCCCCGC,-,0.00) -33(CCGAGACG,-,0.00) -8(GCGGGCCGGCGG,+,0.00) 561_WT_peak_3694 chr19 19774483 19774879 + 176 NA promoter-TSS (NM_020410) promoter-TSS (NM_020410) -178 NM_020410 57130 Hs.501794 NM_020410 HPRD:12501 ATP13A1 ATP13A ATPase type 13A1 protein-coding 0.073232 0.644836 100(CCGGCAAGGCGG,-,0.00) 15(GGCGTCGC,-,0.00) 0(CGGAAGAAGAGG,+,0.00) 17(CGTCGCCA,+,0.00) 72(CGCCGGAC,+,0.00) -50(GGCTGGCCCCGG,-,0.00) -95(GCCGCCATGGCA,+,0.00),-93(CGCCATGGCAGC,-,0.00),-21(GCCGCCATGACA,+,0.00) 190(GGGGCGAAGC,+,0.00) -52(CAGGCTGGCCCC,-,0.00) 561_WT_peak_3677 chr19 17622499 17623085 + 176 NA intron (NM_012088, intron 1 of 4) CpG 360 NM_012088 25796 Hs.466165 NM_012088 HPRD:12001 PGLS 6PGL 6-phosphogluconolactonase protein-coding 0.112628 0.724020 88(CACGTACG,+,0.00) -46(TCGGGCGG,-,0.00) 182(GCCGGGGG,+,0.00) 63(TCGTGCCC,+,0.00),360(TCATGCCG,+,0.00) -123(CGGCGCTA,+,0.00) -99(AGCGCGCA,+,0.00),203(GCCGCGCC,+,0.00),317(GCCGCGCC,+,0.00) -124(GCGGCGCTAGCG,+,0.00),11(GCCGGGCCAGCT,+,0.00) 201(GGGCCGCGCC,+,0.00),315(GGGCCGCGCC,+,0.00) -4(GCCGCCGTCGCC,+,0.00),186(GGGGCCATGCCG,+,0.00) -87(GCTGCCTGGCAG,+,0.00) 561_WT_peak_5982 chr5 149792590 149792949 + 176 NA promoter-TSS (NM_004355) promoter-TSS (NM_004355) -270 NM_001025159 972 Hs.436568 NM_004355 HPRD:00825 CD74 DHLAG|HLADG|II|Ia-GAMMA CD74 molecule, major histocompatibility complex, class II invariant chain protein-coding 0.016713 0.455556 -109(AGACACCT,-,0.00),168(AGAGGCCT,-,0.00) 561_WT_peak_3420 chr18 3593979 3594300 + 176 NA promoter-TSS (NR_024101) promoter-TSS (NR_024101) 27 NR_024101 649446 Hs.19872 NM_001039796 DLGAP1-AS1 HsT914 DLGAP1 antisense RNA 1 ncRNA 0.021807 0.506211 -10(CAGCGCCAGCCC,+,0.00) -89(GTCAGACG,-,0.00) 561_WT_peak_4139 chr2 71357053 71357358 + 176 NA promoter-TSS (NM_005791) promoter-TSS (NM_005791) 189 NM_032601 84693 Hs.94949 NM_032601 HPRD:12229 MCEE GLOD2 methylmalonyl CoA epimerase protein-coding 0.078689 0.633987 33(CCGACCGC,+,0.00) 114(CCTTCAGCACCC,-,0.00) -31(AACGCGCCCC,-,0.00) 561_WT_peak_7017 chr8 48872644 48873150 + 176 NA promoter-TSS (NM_006904) promoter-TSS (NM_006904) 134 NM_005914 4173 Hs.460184 NM_005914 HPRD:09094 MCM4 CDC21|CDC54|NKCD|NKGCD|P1-CDC21|hCdc21 minichromosome maintenance complex component 4 protein-coding 0.084980 0.595661 -101(CGCGTGCG,+,0.00),-66(CCTACGCG,-,0.00) 191(GCGGTCGG,-,0.00) 243(GGCGGGGG,+,0.00) -34(CGGCAGGA,-,0.00) -93(CCCGCTCGGCCC,+,0.00) 57(CGTCTGAC,+,0.00) -41(GGCGCGGC,-,0.00) -91(CGCTCGGCCCGG,-,0.00) -60(CGCGGAGGCGGG,+,0.00) -129(CCCGCCATGCCG,+,0.00),-127(CGCCATGCCGCC,-,0.00) -138(GCTCCGGAGC,+,0.00),-138(GCTCCGGAGC,-,0.00),-48(GCTGCGGGGC,+,0.00) 561_WT_peak_2196 chr14 50329199 50329765 + 176 NA Intergenic 7SLRNA|srpRNA|srpRNA -9943 NM_004713 9147 Hs.655964 NM_004713 HPRD:08494 NEMF NY-CO-1|SDCCAG1 nuclear export mediator factor protein-coding 0.072438 0.606702 50(CCCCGCTCCCGG,+,0.00) 203(GCGGTCGG,-,0.00) 197(CGCCCGGC,-,0.00),275(GCCGGGCG,+,0.00) 193(ACCGCGCC,+,0.00),307(TGGGCGGT,-,0.00),394(GGCGCGGT,-,0.00) 187(CGCGCCACCGCG,-,0.00) 14(GGGCCGGTTC,+,0.00) 164(CCGAGTAG,-,0.00) 561_WT_peak_3437 chr18 12376763 12377110 + 175 NA intron (NM_006796, intron 1 of 16) CpG 339 NM_006796 10939 Hs.726355 NM_006796 HPRD:05205 AFG3L2 SCA28|SPAX5 AFG3-like AAA ATPase 2 protein-coding 0.121037 0.767241 -128(CGGCGCTCCCGG,+,0.00),-58(GCCGGAGGGCGG,-,0.00) -66(CGCGTGCG,+,0.00) -51(GGCGGGGG,+,0.00),17(GCCGGGCG,+,0.00),101(GCCGCGGG,+,0.00) 80(AGGCACGA,-,0.00) -143(GGGCTGAGCGCG,-,0.00),169(CCCTCTCGGCCC,+,0.00) -120(CCGGGGCCGGCT,+,0.00),104(GCGGGGCCAGCA,+,0.00),120(CCCCGGCCCCAC,-,0.00) 116(GCCGCCCCGGCC,+,0.00),147(TGCGCCATGGCC,+,0.00),149(CGCCATGGCCGC,-,0.00),159(GCCGCCGTGGCC,+,0.00) 101(GCCGCGGGGC,+,0.00) 561_WT_peak_766 chr1 228353396 228353822 + 175 NA promoter-TSS (NR_103540) promoter-TSS (NR_103540) 180 NM_001010867 200205 Hs.237017 NM_001010867 HPRD:17318 IBA57 C1orf69|MMDS3 IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae) protein-coding 0.129108 0.763466 -13(CACTCCGGGGCG,-,0.00),194(GCTTCCGAGTCC,-,0.00) 18(TGGCGGCT,+,0.00),92(AGCGGCCT,-,0.00) 8(GGTCTGGCGCTG,-,0.00) 135(CGCGTGCG,+,0.00) -147(GCCCGCCCCT,+,0.00) 210(GCCGCGGG,+,0.00) -145(CCGCCCCTTCCC,-,0.00),-93(CCGCCCCTCCCG,-,0.00) -5(GGCGCGGC,-,0.00) 214(CGGGGGCCCCGC,-,0.00) 19(GGCGGCTGCGCG,-,0.00) -108(GGGCCGCTGT,+,0.00) 149(CGACGCGG,+,0.00) 13(GGCGCTGGCGGC,-,0.00) 561_WT_peak_6283 chr6 32577944 32578142 + 175 NA Intergenic Intergenic -20430 NM_002124 3123 Hs.534322 NM_002124 HPRD:08349 HLA-DRB1 DRB1|DRw10|HLA-DR1B|HLA-DRB|SS1 major histocompatibility complex, class II, DR beta 1 protein-coding 0.010101 0.462312 -120(GGGGAGAAGAGG,+,0.00) 561_WT_peak_7049 chr8 68255685 68255996 + 175 NA promoter-TSS (NM_006421) promoter-TSS (NM_006421) 72 NM_006421 10565 Hs.656902 NM_006421 HPRD:09163 ARFGEF1 ARFGEP1|BIG1|P200 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) protein-coding 0.131833 0.759615 -52(CCCGGCCGCC,-,0.00) -140(GGCGTCGA,-,0.00),-127(TCGCCGCC,+,0.00) -72(TCCCGGCCCG,+,0.00),-3(GCCCGGCCCG,+,0.00) -79(CCGCTTCTCCCG,-,0.00) -89(CGTCGGGC,+,0.00) -97(GCCGCGCC,+,0.00) -99(GGGCCGCGCC,+,0.00),-4(AGCCCGGCCC,-,0.00) -24(GGCCCTGGTGGC,-,0.00),1(GGCCCGGGCGGC,-,0.00) 561_WT_peak_3412 chr18 712071 712671 + 175 NA exon (NM_202758, exon 1 of 15) exon (NM_202758, exon 1 of 15) 146 NM_202758 55556 Hs.658550 NM_017512 ENSG00000132199 ENOSF1 HSRTSBETA|RTS|TYMSAS enolase superfamily member 1 protein-coding 0.111667 0.630616 417(GCGGGAGGGCGG,-,0.00),425(GCGGGAGGGCGG,-,0.00) 118(CGCGTACC,+,0.00),130(CGTCCGCG,-,0.00),148(CGTCCGCG,-,0.00),166(CGTCCGCG,-,0.00),184(CGTCCGCG,-,0.00),202(CGTCCGCG,-,0.00),220(CGTCCGCG,-,0.00),238(CGTCCGCG,-,0.00),256(CGTCCGCG,-,0.00),274(CGTCCGCG,-,0.00) 318(CGGACCGA,+,0.00) 325(AGAGCCGGGA,-,0.00) 337(TCCTGCCG,+,0.00) 293(AAGCGACG,-,0.00) 341(GCCGCGCA,+,0.00) 62(CCCGGGGCCCGC,-,0.00),87(GCGGGGCGGGAG,+,0.00) 278(CGCGCCGTGGCC,+,0.00),345(CGCACCATGGCC,+,0.00) 100(GACCCGGGCCGC,-,0.00) 561_WT_peak_933 chr10 30725920 30726237 + 175 NA intron (NM_001244134, intron 1 of 7) intron (NM_001244134, intron 1 of 7) 3128 NM_005204 1326 Hs.432453 NM_005204 HPRD:01863 MAP3K8 COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding 0.015773 0.440252 60(AGCCACAT,-,0.00) 35(CCGCGAAG,-,0.00) 561_WT_peak_5993 chr5 154320601 154320880 + 175 NA intron (NM_001014990, intron 1 of 5) intron (NM_001014990, intron 1 of 5) 107 NM_014180 29093 Hs.483924 NM_014180 HPRD:14748 MRPL22 L22mt|MRP-L22|MRP-L25|RPML25 mitochondrial ribosomal protein L22 protein-coding 0.064516 0.553571 -109(GCGGGAGGGCGA,-,0.00) -34(GGAGTCGA,-,0.00) 39(GCCGGGGG,+,0.00) 41(CGGGGGAAGCTG,+,0.00) 561_WT_peak_571 chr1 159046689 159047242 + 175 NA promoter-TSS (NM_004833) promoter-TSS (NM_004833) -318 NM_004833 9447 Hs.733411 NM_004833 HPRD:05202 AIM2 PYHIN4 absent in melanoma 2 protein-coding 0.016275 0.436823 111(CAAAACCA,+,0.00) -116(GAAACAGAAAGT,+,0.00) 561_WT_peak_5259 chr3 131221513 131221977 + 175 NA 5' UTR (NM_007208, exon 1 of 10) 5' UTR (NM_007208, exon 1 of 10) 115 NM_007208 11222 Hs.205163 NM_007208 HPRD:06175 MRPL3 COXPD9|MRL3|RPML3 mitochondrial ribosomal protein L3 protein-coding 0.084052 0.636559 205(CTCCCCGGAAAC,+,0.00) -47(GGCGCCGA,-,0.00) 121(CCGGCCGA,+,0.00) 153(CGCCGGAC,+,0.00) -96(CCGGGCCCAGGG,+,0.00) -67(CCGAGTCG,-,0.00),63(CCGCCACG,-,0.00) -81(CACCCAGGCCGT,-,0.00) 561_WT_peak_6933 chr8 17780382 17780928 + 175 NA 5' UTR (NM_006197, exon 1 of 39) 5' UTR (NM_006197, exon 1 of 39) 289 NM_006197 5108 Hs.491148 NM_006197 HPRD:02624 PCM1 PTC4 pericentriolar material 1 protein-coding 0.108059 0.703839 275(GTTCCCGGGTCT,-,0.00) -17(CGGTTGGCGCTG,-,0.00) 76(CCGACCGC,+,0.00) -71(CCCCCGCC,-,0.00) 370(TCGCGACG,-,0.00) 228(CACTCGGCCC,-,0.00) 310(CTAGGCGG,+,0.00) -9(GCTGCGTAGC,+,0.00) 561_WT_peak_6217 chr6 27781876 27782217 + 175 NA promoter-TSS (NM_003521) promoter-TSS (NM_003521) 472 NM_021066 8331 Hs.406691 NM_021066 HIST1H2AJ H2A/E|H2AFE|dJ160A22.4 histone cluster 1, H2aj protein-coding 0.029326 0.423977 42(AAGTGGCT,+,0.00) 561_WT_peak_4637 chr20 40321853 40322307 + 175 NA Intergenic Intergenic -74947 NM_032221 84181 Hs.740645 NM_032221 HPRD:13049 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding 0.044053 0.505495 -129(CGAAAGAGGCGG,+,0.00) 124(CATCGGAC,+,0.00) 182(TTTACCCA,-,0.00) -114(TGCGCGGA,-,0.00),-71(GCTGCGCA,+,0.00),160(GCTGCGCA,+,0.00) -120(CGGGGCTGCGCG,-,0.00) 151(GACCATGGCGCT,-,0.00) 561_WT_peak_6460 chr6 122792460 122792985 + 174 NA promoter-TSS (NM_001270393) promoter-TSS (NM_001270393) 230 NM_020755 57515 Hs.146668 NM_020755 HPRD:15480 SERINC1 TDE1L|TDE2|TMS-2|TMS2 serine incorporator 1 protein-coding 0.049524 0.557034 343(AGACACTT,-,0.00) -164(CCCACCGA,+,0.00) 93(GGACAGAGAGGG,-,0.00) -109(CAAAACCA,+,0.00) 561_WT_peak_3255 chr17 54991125 54991535 + 174 NA promoter-TSS (NM_005082) promoter-TSS (NM_005082) 79 NM_005082 7706 Hs.528952 NM_005082 HPRD:02711 TRIM25 EFP|RNF147|Z147|ZNF147 tripartite motif containing 25 protein-coding 0.095122 0.690998 106(GGCCGCCGAG,+,0.00) 175(GCGGGGGGGCGG,-,0.00) 186(GGCGGCGA,-,0.00) -49(AGGCACGA,-,0.00) -104(GGCGCGGC,-,0.00) -102(CGCGGCACTGCG,-,0.00) 53(TCTGCCATGGCG,+,0.00),55(TGCCATGGCGCT,-,0.00) 561_WT_peak_3400 chr17 80454828 80455204 + 174 NA Intergenic CpG -22578 NM_004514 3607 Hs.591140 NM_004514 HPRD:00982 FOXK2 ILF|ILF-1|ILF1 forkhead box K2 protein-coding 0.127660 0.716180 -54(CGCGCCGGAAGC,+,0.00) -46(AAGCGTTT,+,0.00),177(AGACGCCT,-,0.00) -68(CAGCGCCAGCCG,+,0.00),192(CAGCCCCGGCCC,+,0.00) -78(TCAGTCGG,-,0.00) 195(CCCCGGCCCT,+,0.00) -145(CGGCACCA,-,0.00),-36(TCGTGCAG,+,0.00) 35(CCGCTTCCCCCC,-,0.00) 46(CGGGTTTG,-,0.00) -99(TCTACCCG,-,0.00) 122(GGGAGCCGCCGG,+,0.00) -75(GTCGGGCCAGCG,+,0.00),10(CGCAGGCGCCGC,-,0.00),85(CGAGGGCCCCGC,-,0.00) 188(CGCGCAGCCCCG,+,0.00) 561_WT_peak_7403 chr9 117453235 117453683 + 174 NA Intergenic Intergenic -9090 NM_001199233 100505478 Hs.200101 NM_001199233 LOC100505478 - uncharacterized LOC100505478 protein-coding 0.015625 0.449889 201(GCTGTGGAGC,+,0.00) 561_WT_peak_774 chr1 228754835 228755134 + 174 NA Intergenic CpG -25410 NR_037962 58480 Hs.647774 NM_021205 HPRD:06965 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding 0.066890 0.620000 -135(CCCGGGAGGCGG,-,0.00) 108(GGCGCCTGGCTG,+,0.00) 561_WT_peak_5221 chr3 119395937 119396169 + 174 NA exon (NM_005694, exon 1 of 3) exon (NM_005694, exon 1 of 3) 190 NM_005694 10063 Hs.534383 NM_005694 COX17 - COX17 cytochrome c oxidase copper chaperone protein-coding 0.094828 0.695279 -29(GTCTCCGGGCAA,-,0.00),46(AGACCCGGCATC,+,0.00) -2(AGCGGCTT,-,0.00) -83(CGTCGGCC,+,0.00) -78(GCCGCGCC,+,0.00),-63(GCTGCGCA,+,0.00) 561_WT_peak_4860 chr22 25464174 25464502 + 174 NA intron (NM_001145206, intron 4 of 10) intron (NM_001145206, intron 4 of 10) 40397 NM_001145206 85379 Hs.419171 NM_001145206 ENSG00000197077 KIAA1671 - KIAA1671 protein-coding 0.027439 0.577508 123(TGGCACGA,-,0.00) 561_WT_peak_3283 chr17 57918062 57918580 + 174 NA promoter-TSS (NR_029493) promoter-TSS (NR_029493) -306 NR_029493 406991 Hs.444569 NR_029493 miRBase:MI0000077 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA 0.005792 0.368015 -151(AGCCACTA,-,0.00) 108(TCTTGCCG,+,0.00) 561_WT_peak_5160 chr3 75834484 75834763 + 174 NA promoter-TSS (NM_001128223) promoter-TSS (NM_001128223) 111 NM_001290208 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 X17|ZNF838 zinc finger protein 717 protein-coding 0.096774 0.728571 -45(CCGGCCCCCCGG,+,0.00) -139(CCCCCGCC,-,0.00) -148(TCCTCCCAGCCC,+,0.00) 49(CAAGACCG,+,0.00) 35(GGCTGGCCCAGC,-,0.00) 561_WT_peak_5270 chr3 136471426 136472001 + 174 NA promoter-TSS (NM_005862) promoter-TSS (NM_005862) -468 NM_005862 10274 Hs.412586 NM_005862 HPRD:05076 STAG1 SA1|SCC3A stromal antigen 1 protein-coding 0.088696 0.618056 66(GGGCCGGCGCTT,-,0.00),308(CACCGCCGGCCC,+,0.00) -39(CGCGTCCG,+,0.00) -76(CCCGCGGC,-,0.00),89(CGCCCGGC,-,0.00) 371(CGGCTTTG,-,0.00) 152(GCCGCGCA,+,0.00) 21(GAACCCGCCC,-,0.00) -56(GGCCACGGTGGC,-,0.00) 561_WT_peak_3283-2 chr17 57916354 57917875 + 174 NA intron (NM_030938, intron 11 of 11) intron (NM_030938, intron 11 of 11) -1513 NR_029493 406991 Hs.444569 NR_029493 miRBase:MI0000077 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA 0.013807 0.406702 -78(CCGCCTCCCGGG,+,0.00) 125(CGCCCGGC,-,0.00) 508(AGGTTTTG,-,0.00) -81(CCTCCGCCTCCC,-,0.00),82(CCTTGGCCTCCC,-,0.00),1237(CCTTCCTCTCCC,-,0.00) 121(ACCGCGCC,+,0.00) 78(CCCGCCTTGGCC,+,0.00) 561_WT_peak_3559 chr19 1383220 1384064 + 173 NA promoter-TSS (NM_024407) promoter-TSS (NM_024407) -241 NM_024407 374291 Hs.211914 NM_024407 NDUFS7 CI-20|CI-20KD|MY017|PSST NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase) protein-coding 0.110190 0.648521 52(GGCGGCAGAG,+,0.00) 461(AGCCGCTT,-,0.00) 91(GCGCCTTCCCTG,+,0.00),481(CCGGGAACCCGG,-,0.00) 629(GGCGTCGG,-,0.00),648(GGCGTCGT,-,0.00) 201(CGCGTTCG,+,0.00) 309(TCGGTCCG,-,0.00) 324(CCCGCGGC,-,0.00) 312(GTCCGCCG,-,0.00) 436(GGTTCCGGTTTC,-,0.00) 50(TGGGCGGC,-,0.00),469(TGGGCGGC,-,0.00) 473(CGGCGGCCCCGG,-,0.00) 318(CGCAGACCCGCG,+,0.00) 460(GAGCCGCTTT,+,0.00) 359(CCGCCTCG,-,0.00) -89(GCTGCGAGGC,+,0.00) 561_WT_peak_7541 chrX 48768749 48769247 + 173 NA 5' UTR (NM_001282651, exon 1 of 5) 5' UTR (NM_001282651, exon 1 of 5) 237 NM_001032289 7355 Hs.21899 NM_005660 HPRD:02441 SLC35A2 CDG2M|CDGX|UDP-Gal-Tr|UGALT|UGAT|UGT|UGT1|UGT2|UGTL solute carrier family 35 (UDP-galactose transporter), member A2 protein-coding 0.090361 0.635271 64(GCTGCCGGGCCA,-,0.00),95(AGAGCCGGGATC,+,0.00) 39(AACCACTT,-,0.00) 193(CCGGGGACACGG,-,0.00) 48(CGCGTTCG,+,0.00) 176(TCCGTCGG,-,0.00) 11(GCCCGGCCCG,+,0.00),95(AGAGCCGGGA,-,0.00) 202(CGGCCCGA,-,0.00),272(TCCTGCCG,+,0.00) 178(CGTCGGAT,+,0.00) -130(CCTCCGCCTCCC,-,0.00) -47(CCCTGGCCCGGG,-,0.00),-41(CCCGGGCGCCGC,-,0.00) 561_WT_peak_5097 chr3 48646851 48647077 + 173 NA intron (NM_003365, intron 1 of 12) CpG 134 NM_003365 7384 Hs.119251 NM_003365 HPRD:01875 UQCRC1 D3S3191|QCR1|UQCR1 ubiquinol-cytochrome c reductase core protein I protein-coding 0.115044 0.713656 -164(CCGCCCTCCGCC,+,0.00) -26(CGGCGGGCGCGC,-,0.00) 15(CCGACAGA,+,0.00) 11(CGGCCCGA,-,0.00) -137(CCCTGACCCCGC,-,0.00) 561_WT_peak_5502 chr4 74124602 74125169 + 173 NA promoter-TSS (NM_198889) promoter-TSS (NM_198889) -383 NM_198889 26057 Hs.601206 NM_032217 HPRD:10648 ANKRD17 GTAR|NY-BR-16 ankyrin repeat domain 17 protein-coding 0.084656 0.646127 -142(GAAGGAGGGTGA,-,0.00) 295(AGACACTT,-,0.00) 330(CCGGGAGGTGGG,-,0.00) -82(GGAAAGAAGCGG,+,0.00) 32(CCTCGCTA,+,0.00) 256(AGCCGGCCCCGG,-,0.00) 187(GGGCCGGGTC,+,0.00),340(GGGCCTCGTT,+,0.00) 561_WT_peak_1317 chr11 62369401 62369666 + 173 NA promoter-TSS (NM_004739) promoter-TSS (NM_004739) -221 NM_004739 9219 Hs.173043 NM_004739 HPRD:07233 MTA2 MTA1L1|PID metastasis associated 1 family, member 2 protein-coding 0.094340 0.635338 82(AGCCCCGGAGGC,+,0.00) -4(AAGCGGCT,+,0.00),-3(AGCGGCTT,-,0.00) 93(CGCCCGGC,-,0.00) -1(CGGCTTTG,-,0.00) -133(AGCTCGGCCC,-,0.00) -140(CCGTCGCAGC,-,0.00) 561_WT_peak_4458 chr2 208393917 208394448 + 172 NA promoter-TSS (NM_134442) promoter-TSS (NM_134442) -434 NM_134442 1385 Hs.516646 NM_004379 HPRD:00442 CREB1 CREB cAMP responsive element binding protein 1 protein-coding 0.103578 0.710526 210(AGCCGCCT,-,0.00) -120(GCCGTCGA,-,0.00),-116(TCGACGTC,+,0.00),28(ACGACGCC,+,0.00),154(GGCGTCGG,-,0.00) 172(GGGCTGGCGGCG,-,0.00) 140(CCCCGTCTCCCG,-,0.00),319(CCGCTTCCTCCT,-,0.00) 248(GGCCTGAGCGGG,-,0.00) 23(GTCCCACG,-,0.00),156(CGTCGGAA,+,0.00) 321(GCTTCCTCCTTC,-,0.00) -69(TCGGGGCCAGCG,+,0.00),43(CCCAGGCCCCGG,-,0.00) -14(CGCGGAGTCTCG,+,0.00) 116(GCGTCCCAGC,-,0.00) 561_WT_peak_7208 chr9 6680856 6681446 + 172 NA Intergenic CpG -35459 NM_000170 2731 Hs.584238 NM_000170 HPRD:01996 GLDC GCE|GCSP|HYGN1 glycine dehydrogenase (decarboxylating) protein-coding 0.093220 0.639594 91(GGCTCCGGGCCC,-,0.00) 339(CTGGGCCGCC,-,0.00) 333(AAGCCTCT,+,0.00) -98(CCGGCAAGGCCG,-,0.00) 19(GGCGTCGG,-,0.00) 188(GGGCGGCAGCCC,+,0.00) -84(TCGTGACG,+,0.00),-31(CCGCACGA,-,0.00) -72(CGTCTGAC,+,0.00) 132(ACCGCGCC,+,0.00) -142(CTAGGCGG,+,0.00),-89(CCGCCTCG,-,0.00),300(CCGCGTAG,-,0.00) -97(CGGCAAGGCCGC,-,0.00),377(CCGCCTGGCCGC,-,0.00) 561_WT_peak_7437 chr9 130793331 130793570 + 172 NA Intergenic L1ME1|LINE|L1 36149 NM_197956 203245 Hs.373606 NM_197956 HPRD:12987 NAIF1 C9orf90|bA379C10.2 nuclear apoptosis inducing factor 1 protein-coding 0.020921 0.475000 24(TTTACCCT,-,0.00) 55(CCGAGTCG,-,0.00) 561_WT_peak_7209 chr9 6681500 6682045 + 172 NA Intergenic Intergenic -36080 NM_000170 2731 Hs.584238 NM_000170 HPRD:01996 GLDC GCE|GCSP|HYGN1 glycine dehydrogenase (decarboxylating) protein-coding 0.071560 0.600733 142(GTCTTCGGTCCT,-,0.00) 266(CCGCCTCCCGGG,+,0.00) 60(GCGTGCCG,+,0.00),239(CGGCGCGA,-,0.00) 355(TAGAGACG,-,0.00) -27(GGGTGCCGCAGG,+,0.00) 246(ATCTCGGCCC,-,0.00) 561_WT_peak_2234 chr14 58894073 58894479 + 172 NA promoter-TSS (NM_014749) promoter-TSS (NM_014749) -44 NM_012460 26520 Hs.440525 NM_012460 HPRD:09574 TIMM9 TIM9|TIM9A translocase of inner mitochondrial membrane 9 homolog (yeast) protein-coding 0.056650 0.503686 -118(CGTCCCTA,+,0.00) -14(CGGTCTTG,-,0.00),158(CGGGTTTG,-,0.00) -76(CTGGTAAA,+,0.00) 155(GGGCGGGTTT,+,0.00) 561_WT_peak_2724 chr16 21531247 21532101 + 172 NA promoter-TSS (NR_002594) promoter-TSS (NR_002594) 91 NR_002594 387254 Hs.448808 NR_002594 SLC7A5P2 IMAA|MMAA solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2 pseudo 0.131148 0.735673 225(CTCGGCCACC,-,0.00) 622(CCGTCCTCCCGG,+,0.00) -71(TCGCCGCC,+,0.00),342(TCGCCGCC,+,0.00) 18(CAGCGCCAGCCC,+,0.00) -1(CGCACGCG,-,0.00),176(CGTCCGCG,-,0.00),421(CGTCCGCG,-,0.00) -68(CCGCCCGA,+,0.00),318(CCGAGCGA,+,0.00) 597(CCCCCGGC,-,0.00) 63(CGTCACGA,-,0.00) 198(CATCTTCTCCCG,-,0.00) 307(GGGAGCCGCAGC,+,0.00) 169(GCCGCGCC,+,0.00) 162(TGCCGGCGCCGC,-,0.00),173(CGCCGTCCGCGC,-,0.00),289(GCCGGGCCTGGG,+,0.00),377(CGCCCGCGCCGC,-,0.00),405(CACTGGCCCCGC,-,0.00),600(CCGGCGCCCGCG,+,0.00),644(GCGGGGCCTGGC,+,0.00) -44(CCCAGCTCCGCG,-,0.00),425(CGCGGCTCCTCC,-,0.00) 1(CACGCGGCCC,-,0.00),372(AACCCCGCCC,-,0.00),464(AGCCCCGCCC,-,0.00) -37(CCGCGTAG,-,0.00),186(CTTGGCGG,+,0.00) 268(CCCGCCATGCTC,+,0.00) 646(GGGGCCTGGCAG,+,0.00) 561_WT_peak_1542 chr12 562432 562738 + 172 NA Intergenic CpG -6958 NM_173593 283358 Hs.504416 NM_173593 HPRD:12514 B4GALNT3 - beta-1,4-N-acetyl-galactosaminyl transferase 3 protein-coding 0.117647 0.742671 -163(GGGCCGAGCGGG,-,0.00),-92(GGGCCGAGCGGG,-,0.00),-21(GGGCCGAGCGGG,-,0.00),50(GGGCCGAGCGGG,-,0.00) 121(GGGCCGAGTT,+,0.00) -129(GCTGCGGTGC,+,0.00),-58(GCTGCGGTGC,+,0.00),13(GCTGCGGTGC,+,0.00),84(GCTGCGGTGC,+,0.00) 561_WT_peak_3470 chr18 22006600 22007156 + 172 NA intron (NM_018439, intron 1 of 10) CpG 269 NM_018439 55364 Hs.515317 NM_018439 HPRD:13739 IMPACT RWDD5 impact RWD domain protein protein-coding 0.102518 0.698384 -153(GGTTCCGGGTCG,-,0.00),28(GGCTCCGGCTCG,-,0.00) 155(GTCGGCCGAG,+,0.00),185(CTCGGCGGCC,-,0.00),188(GGCGGCCGCG,+,0.00) 211(TCGGACGG,-,0.00) -144(TCGGGCCG,+,0.00) -42(TGGCTGAGGGGG,-,0.00) 154(CGTCGGCC,+,0.00) 268(AAAAACCG,+,0.00) 138(TTTTCCCG,-,0.00) -140(GCCGCGCC,+,0.00) -102(CCCCGCCCCCGC,-,0.00),291(CCCTGCCGCCGC,-,0.00) 177(GGCGGCTCCTCG,-,0.00) -142(GGGCCGCGCC,+,0.00) -137(GCGCCGCAGC,-,0.00),-119(GGCTCGCAGC,-,0.00) 561_WT_peak_6980 chr8 37963039 37963350 + 172 NA promoter-TSS (NM_001105214) promoter-TSS (NM_001105214) -117 NM_001105214 9070 Hs.521530 NM_004674 HPRD:05309 ASH2L ASH2|ASH2L1|ASH2L2|Bre2 ash2 (absent, small, or homeotic)-like (Drosophila) protein-coding 0.086817 0.708333 -139(CCGTGATGGCGG,-,0.00),35(CCGGGGAGGCTG,-,0.00),82(GCGGGAGGGAGG,-,0.00) 67(CCGCCCGA,+,0.00) 93(GCCCGCCCCT,+,0.00) 110(CCCGCGGC,-,0.00) -127(CGGCAGGA,-,0.00),62(TCCTGCCG,+,0.00) 74(AGGAAGACGCGG,+,0.00) 51(CGGGTAAG,+,0.00) 112(CGCGGCTCCTGG,-,0.00) 561_WT_peak_1379 chr11 66206029 66206278 + 172 NA exon (NM_170739, exon 1 of 6) exon (NM_170739, exon 1 of 6) 166 NR_120589 65003 Hs.418450 NM_016050 HPRD:14739 MRPL11 L11MT|MRP-L11 mitochondrial ribosomal protein L11 protein-coding 0.088353 0.700000 15(CCGGCCGA,+,0.00) -42(CCGCACGA,-,0.00) -105(CCGCCACG,-,0.00) -106(CCCGCCACGGCC,+,0.00),-104(CGCCACGGCCGC,-,0.00) 10(GCGGCCCGGCCG,+,0.00) 561_WT_peak_2932 chr16 85089045 85089491 + 172 NA intron (NM_001286566, intron 1 of 11) L3|LINE|CR1 -7550 NM_001286565 9764 Hs.301658 NM_014732 HPRD:17192 KIAA0513 - KIAA0513 protein-coding 0.017937 0.478747 53(AGACACCT,-,0.00) 561_WT_peak_3924 chr19 58280874 58281461 + 172 NA 5' UTR (NM_017652, exon 1 of 3) 5' UTR (NM_017652, exon 1 of 3) 147 NM_001077426 54807 Hs.625133 NM_017652 HPRD:15863 ZNF586 - zinc finger protein 586 protein-coding 0.083475 0.658163 387(GGCGGAGGGCAA,-,0.00) -159(AGCCACCT,-,0.00),303(AGGCCTCT,+,0.00) 148(CCGCGTTCCCCC,+,0.00) 94(GCGACGCC,+,0.00) 367(GCGGTCGG,-,0.00) 158(CCCCCGCC,-,0.00) 340(GATCCCTGTTTC,-,0.00) -116(GAATCCGCCC,-,0.00) 169(AGTCATGGCGGC,-,0.00) 561_WT_peak_4286 chr2 128145095 128145499 + 172 NA Intergenic CpG -30699 NM_000312 5624 Hs.224698 NM_000312 HPRD:01466 PROC APC|PC|PROC1|THPH3|THPH4 protein C (inactivator of coagulation factors Va and VIIIa) protein-coding 0.141089 0.762963 39(TAGCCGCT,+,0.00) -25(GCGGGGTGGCGG,-,0.00) 149(GGCGCCGA,-,0.00),175(TCGTCGCC,+,0.00),178(TCGCCGCC,+,0.00) -33(CGGGCCGGGC,-,0.00) -30(GCCGGGCG,+,0.00),88(GCCGCGGG,+,0.00),183(GCCGCGGG,+,0.00) 100(CGTCGCTA,+,0.00) 90(CGCGGGCCCGCG,+,0.00),90(CGCGGGCCCGCG,-,0.00) -143(ACCGCGGCCC,-,0.00) 97(CCGCGTCG,-,0.00) 561_WT_peak_2800 chr16 31885138 31885815 + 172 NA intron (NR_049749, intron 1 of 4) CpG 397 NM_001265588 10308 Hs.460645 NM_003414 HPRD:06883 ZNF267 HZF2 zinc finger protein 267 protein-coding 0.070901 0.631268 -119(AGGCGGCT,+,0.00),209(AGCGACCT,-,0.00) 36(CGGAAGCGGCGG,+,0.00),261(CCGCGTCTCCCC,-,0.00) -51(CGTAGCTA,+,0.00) -3(GCGGGGTCGGGG,+,0.00) -118(GGCGGCTTCGCG,-,0.00),241(GGCAGCTCCGCG,-,0.00),254(CGCAGCCCCGCG,-,0.00) 121(AGCTCGGCCC,-,0.00) 248(CCGCGTCG,-,0.00) -124(GGCCCAGGCGGC,-,0.00),156(GGCCAGGCCGGC,-,0.00) 250(GCGTCGCAGC,-,0.00) 154(GCGGCCAGGCCG,+,0.00),155(CGGCCAGGCCGG,-,0.00),167(CAGCCGGGACCC,-,0.00) 561_WT_peak_58 chr1 11159645 11159869 + 172 NA intron (NM_001001998, intron 1 of 24) CpG 181 NM_001001998 5394 Hs.632368 NM_002685 HPRD:16180 EXOSC10 PM-Scl|PM/Scl-100|PMSCL|PMSCL2|RRP6|Rrp6p|p2|p3|p4 exosome component 10 protein-coding 0.116071 0.724444 -78(GGCGGCCGCG,+,0.00) -11(CCGGGAAGCCTG,-,0.00) -138(TCGCTCGG,-,0.00),14(TCCGTCGG,-,0.00) -74(GCCGCGGG,+,0.00) 16(CGTCGGAT,+,0.00) 19(CGGATTTG,-,0.00) 49(CCCTGGGCTCCC,-,0.00) -162(GCGCGGACAGGG,+,0.00),-51(CCGAGGCCCCGC,-,0.00) -50(CGAGGCCCCGCG,-,0.00) -4(GCCTGGCAGC,-,0.00) 561_WT_peak_1026 chr10 70660497 70661551 + 172 NA promoter-TSS (NM_024045) promoter-TSS (NM_024045) -10 NM_024045 79009 Hs.522984 NM_024045 HPRD:09910 DDX50 GU2|GUB|RH-II/GuB|mcdrh DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 protein-coding 0.073055 0.633175 530(GGAGGAGTCCGA,-,0.00) -57(GCGGGATGGAGG,-,0.00),453(CCCGGAGGGAGG,-,0.00) -118(CCGACGCC,+,0.00) 76(TCCCAGCCCT,+,0.00) 384(GCCGGGCG,+,0.00) 685(TCGCGCCG,+,0.00) 612(GGGCGGGGAGGG,-,0.00),789(GCCCCTCAGCCC,+,0.00) 44(CGCCGGAC,+,0.00) 652(CAGAACCG,+,0.00) 338(TTTCCCCG,-,0.00) 582(GCCGCGCC,+,0.00) 580(GGGCCGCGCC,+,0.00) -21(CGAGGCGG,+,0.00) -67(CCCGCAATGGGC,+,0.00),377(GGCCAAGGCCGG,-,0.00),392(GCCGCCTTGCCC,+,0.00) 73(GCTTCCCAGC,-,0.00) 561_WT_peak_3760 chr19 39902792 39903075 + 172 NA promoter-TSS (NM_022835) promoter-TSS (NM_022835) -817 NM_022835 64857 Hs.631574 NM_022835 HPRD:15148 PLEKHG2 ARHGEF42|CLG pleckstrin homology domain containing, family G (with RhoGef domain) member 2 protein-coding 0.070671 0.549296 -14(TAGCCACG,-,0.00) 92(GCCTCGCGGC,-,0.00) 561_WT_peak_5197 chr3 108525133 108525460 + 171 NA Intergenic Intergenic -16335 NM_016388 50852 Hs.138701 NM_016388 HPRD:05392 TRAT1 TCRIM|TRIM T cell receptor associated transmembrane adaptor 1 protein-coding 0.009174 0.426829 -144(CCCTCTCAGCAG,+,0.00) 561_WT_peak_4953 chr22 42598769 42598991 + 171 NA intron (NM_181492, intron 1 of 3) intron (NM_181492, intron 1 of 3) 12467 NM_181492 6942 Hs.475018 NM_005650 HPRD:04378 TCF20 AR1|SPBP|TCF-20 transcription factor 20 (AR1) protein-coding 0.009009 0.475336 561_WT_peak_6153 chr6 26204668 26205370 + 171 NA exon (NM_003545, exon 1 of 1) exon (NM_003545, exon 1 of 1) 146 NM_003545 8367 Hs.662174 NM_003545 HIST1H4E H4/j|H4FJ histone cluster 1, H4e protein-coding 0.072650 0.513514 510(AGCCGTTT,-,0.00) -67(CGTATGCG,-,0.00) -9(CGTCGCTT,+,0.00) 72(TGGGTAAA,+,0.00) 410(GCCGCCCA,+,0.00) 158(CGTCGCGG,+,0.00) 561_WT_peak_2985 chr17 3614437 3614741 + 171 NA Intergenic Intergenic -12608 NM_031965 83903 Hs.534059 NM_031965 HPRD:17083 GSG2 HASPIN germ cell associated 2 (haspin) protein-coding 0.026316 0.442623 561_WT_peak_127 chr1 27021865 27022358 + 171 NA promoter-TSS (NM_139135) promoter-TSS (NM_139135) -411 NM_006015 8289 Hs.468972 NM_006015 HPRD:04319 ARID1A B120|BAF250|BAF250a|BM029|C1orf4|ELD|MRD14|OSA1|P270|SMARCF1|hELD|hOSA1 AT rich interactive domain 1A (SWI-like) protein-coding 0.117647 0.716599 -15(GGCTCCGGGCCG,-,0.00) -156(GGCGGCCGCG,+,0.00),156(GGCGGCCGCG,+,0.00),266(CTCGCCCGCC,-,0.00) 37(AAGCGGCT,+,0.00),239(TAGCCGCT,+,0.00) -51(CCGGGAGGGAGG,-,0.00) 251(CCGGCCGA,+,0.00),255(CCGACCGC,+,0.00) -121(GCCGCGGG,+,0.00) 197(TCGTGTCG,+,0.00) -59(TAGGGACG,-,0.00) 145(CGGGTTTG,-,0.00) -117(CGGGTAAA,+,0.00),173(TGGGTAAA,+,0.00) -21(TGCGCGGG,-,0.00),280(GCCGCGCA,+,0.00) -19(CGCGGGCTCCGG,-,0.00),124(CGCCCGCTCCGC,-,0.00) -9(GGGCCGGGTT,+,0.00) -159(CGAGGCGG,+,0.00),161(CCGCGACG,-,0.00),198(CGTGTCGG,+,0.00) -162(GGCCGAGGCGGC,-,0.00) 17(GCGGCGGCGC,+,0.00),280(GCCGCGCAGC,-,0.00) 561_WT_peak_1525 chr11 128172457 128172919 + 171 NA Intergenic (T)n|Simple_repeat|Simple_repeat 219517 NM_005238 2113 Hs.369438 NM_005238 HPRD:01260 ETS1 ETS-1|EWSR2|p54 v-ets avian erythroblastosis virus E26 oncogene homolog 1 protein-coding 0.008658 0.382289 -98(TCTTCCTATTTC,-,0.00) 561_WT_peak_4545 chr20 2644707 2645257 + 171 NA promoter-TSS (NM_001258384) promoter-TSS (NM_001258384) -117 NM_006899 3420 Hs.436405 NM_006899 HPRD:05163 IDH3B H-IDHB|RP46 isocitrate dehydrogenase 3 (NAD+) beta protein-coding 0.054545 0.517241 -106(GCCCGCCCCT,+,0.00) 5(GGCGCGGC,-,0.00) 5(GGCGCGGCCC,-,0.00) 561_WT_peak_3561 chr19 1653038 1653355 + 171 NA promoter-TSS (NM_003200) promoter-TSS (NM_003200) -868 NM_003200 6929 Hs.371282 NM_003200 HPRD:00918 TCF3 E2A|E47|ITF1|TCF-3|VDIR|bHLHb21 transcription factor 3 protein-coding 0.100946 0.660377 -123(GGCGGCCGGG,+,0.00) -37(TCGGGCCG,+,0.00) 21(CGTCAGAC,+,0.00) 44(GAAAACCG,+,0.00) 32(TTTTCCCG,-,0.00),41(CGGGAAAA,+,0.00) -34(GGCCGGCCCCGC,-,0.00),53(CTCTGGCTCCGG,-,0.00) 123(CGTCTCGG,+,0.00) -122(GCGGCCGGGGTG,+,0.00) 561_WT_peak_2910 chr16 75467735 75468217 + 171 NA promoter-TSS (NM_006324) promoter-TSS (NM_006324) -589 NM_006324 10428 Hs.461361 NM_006324 HPRD:16282 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding 0.043568 0.467909 171(AGGCCGCT,+,0.00),245(AAGCGGCT,+,0.00),246(AGCGGCTA,-,0.00) -51(TGGTTTTG,-,0.00) 248(CGGCTAAA,+,0.00) 561_WT_peak_594 chr1 161509729 161510354 + 171 NA Intergenic tRNA-Asn-AAC|tRNA|tRNA 9777 NM_001127592 2214 Hs.372679 NM_000569 HPRD:00903 FCGR3A CD16|CD16A|FCG3|FCGR3|FCGRIII|FCR-10|FCRIII|FCRIIIA|IGFR3|IMD20 Fc fragment of IgG, low affinity IIIa, receptor (CD16a) protein-coding 0.054400 0.520767 161(CGCGTTCG,+,0.00) 121(CAAAATCG,+,0.00),305(CAAAACCA,+,0.00) 397(CGGGTAAT,+,0.00) 9(GCCGCGCC,+,0.00) 424(CCGACTAG,-,0.00) 561_WT_peak_3407 chr18 96874 97552 + 171 NA Intergenic TAR1|Satellite|telo -11852 NR_033770 727758 Hs.585843 NR_033770 ROCK1P1 - Rho-associated, coiled-coil containing protein kinase 1 pseudogene 1 pseudo 0.057522 0.721649 -126(GGCGGCCGGG,+,0.00),55(GGCGGCCGGG,+,0.00),176(GGCGGCCGGG,+,0.00),237(GGCGGCCGGG,+,0.00),298(GGCGGCCGGG,+,0.00),359(GGCGGCCGGG,+,0.00) 479(TGGCGGCT,+,0.00) -122(GCCGGGGG,+,0.00),59(GCCGGGGG,+,0.00),180(GCCGGGGG,+,0.00),241(GCCGGGGG,+,0.00),302(GCCGGGGG,+,0.00),363(GCCGGGGG,+,0.00) 464(CGGCACGC,-,0.00) 561_WT_peak_6855 chr7 135194541 135194835 + 171 NA 5' UTR (NM_013316, exon 1 of 11) 5' UTR (NM_013316, exon 1 of 11) 187 NM_001190850 4850 Hs.490224 NM_013316 HPRD:05369 CNOT4 CLONE243|NOT4|NOT4H CCR4-NOT transcription complex, subunit 4 protein-coding 0.078231 0.616949 -2(CCGAACGA,+,0.00),90(TCGGTGGG,-,0.00) 65(CGGCTGAGAGAG,-,0.00) 53(GTCCGACC,-,0.00) 26(CAGAACCG,+,0.00) 10(CGGGGAAA,+,0.00) 561_WT_peak_6844-2 chr7 130645686 130646341 + 171 NA intron (NR_109852, intron 4 of 5) intron (NR_109852, intron 4 of 5) 47790 NR_109780 100506860 Hs.635013 NR_109780 LOC100506860 - uncharacterized LOC100506860 ncRNA 0.015267 0.417683 260(AGGCGTCT,+,0.00) -19(CAAAACCA,+,0.00) 27(CTTACCCG,-,0.00) 561_WT_peak_2955 chr16 89626543 89627008 + 171 NA promoter-TSS (NM_000977) promoter-TSS (NM_000977) -290 NM_001243131 6137 Hs.410817 NM_000977 HPRD:06428 RPL13 BBC1|D16S444E|D16S44E|L13 ribosomal protein L13 protein-coding 0.111828 0.596567 115(CTCGGCCGCG,-,0.00),207(CACGGCCGCC,-,0.00) 266(CCGGGAGAGCCG,-,0.00) 52(GGCGTCGC,-,0.00) 68(CGTCGGCC,+,0.00),158(CGGCGGAC,+,0.00) 126(CCCGCGCA,+,0.00) 120(CCGCGGCCCGCG,+,0.00) 214(GCCCCGCCGC,-,0.00) 561_WT_peak_5462 chr4 48833125 48833671 + 171 NA promoter-TSS (NM_001168254) promoter-TSS (NM_001168254) 75 NM_001168254 54940 Hs.518750 NM_017830 HPRD:17654 OCIAD1 ASRIJ|OCIA|TPA018 OCIA domain containing 1 protein-coding 0.065934 0.599634 -26(GGAGGTGGGTGA,-,0.00) -88(CCCTCCGGGCCT,-,0.00) 108(CTCGGCCTCC,-,0.00) 275(AGGCCGCT,+,0.00) -143(CCCCCTCCCCGC,+,0.00) -113(CCCTCCCTGCCC,+,0.00),341(CCGTGTCAGCCC,+,0.00) 135(GGGAGGCGACGG,+,0.00) 561_WT_peak_319 chr1 92021583 92022085 + 171 NA Intergenic Intergenic 55169 NM_001134420 8317 Hs.533573 NM_003503 HPRD:10345 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding 0.011952 0.403579 80(TCGTGCCT,+,0.00) -36(CAAAACTG,+,0.00),163(CAAAACCA,+,0.00) 314(GCTACCTGTTTC,-,0.00) 66(AAATAGGCCC,-,0.00) 561_WT_peak_6284 chr6 32590557 32591078 + 171 NA Intergenic Intergenic -14366 NM_002122 3117 Hs.387679 NM_002122 HPRD:06765 HLA-DQA1 CD|CELIAC1|DQ-A1|GSE|HLA-DQA major histocompatibility complex, class II, DQ alpha 1 protein-coding 0.001919 0.373563 561_WT_peak_151 chr1 31769340 31769619 + 171 NA promoter-TSS (NM_001282569) promoter-TSS (NM_001282569) 165 NM_004814 9410 Hs.33962 NM_004814 HPRD:08481 SNRNP40 40K|HPRP8BP|PRP8BP|PRPF8BP|SPF38|WDR57 small nuclear ribonucleoprotein 40kDa (U5) protein-coding 0.064516 0.625000 29(ATGCCGCT,+,0.00) -27(GGCGTCGC,-,0.00) 27(TCATGCCG,+,0.00) 561_WT_peak_1025 chr10 70480413 70480909 + 171 NA promoter-TSS (NM_018237) promoter-TSS (NM_018237) -240 NM_001282960 55749 Hs.49853 NM_018237 HPRD:10811 CCAR1 - cell division cycle and apoptosis regulator 1 protein-coding 0.052419 0.490946 -103(GGGGGAGGGGGG,-,0.00) 315(CGCGCACG,+,0.00) 313(AGCGCGCA,+,0.00) 561_WT_peak_6844 chr7 130645181 130645542 + 171 NA intron (NR_109852, intron 4 of 5) intron (NR_109852, intron 4 of 5) 47138 NR_109780 100506860 Hs.635013 NR_109780 LOC100506860 - uncharacterized LOC100506860 ncRNA 0.013850 0.406077 148(AAATCCGCCC,-,0.00) 561_WT_peak_5050 chr3 32338313 32338652 + 171 NA intron (NM_178868, intron 1 of 3) intron (NM_178868, intron 1 of 3) 58311 NM_178868 152189 Hs.154986 NM_178868 HPRD:06989 CMTM8 CKLFSF8|CKLFSF8-V2 CKLF-like MARVEL transmembrane domain containing 8 protein-coding 0.011799 0.450000 561_WT_peak_4911 chr22 38245424 38245662 + 170 NA intron (NM_016091, intron 1 of 12) CpG 164 NM_001242923 51386 Hs.446852 NM_016091 HPRD:10932 EIF3L EIF3EIP|EIF3S11|EIF3S6IP|HSPC021|HSPC025|MSTP005 eukaryotic translation initiation factor 3, subunit L protein-coding 0.088235 0.673640 -17(GCTTCCGGGTCG,-,0.00) 8(CCGACCTCCCGC,+,0.00),12(CCTCCCGCCCGG,+,0.00) 4(CCGGCCGA,+,0.00) 18(GCCCGGCCCT,+,0.00) 17(CGCCCGGC,-,0.00) -29(CGGCGCGA,-,0.00) -82(GGCGCGGT,-,0.00) 561_WT_peak_2571 chr15 80189098 80189802 + 170 NA promoter-TSS (NM_006441) promoter-TSS (NM_006441) -59 NM_006441 10588 Hs.194294 NM_006441 MTHFS HsT19268 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase) protein-coding 0.112216 0.717730 292(TCGCCCTCCCCG,+,0.00) -21(TAGCCGCT,+,0.00),522(AGTCGCTT,-,0.00) 292(TCGCCCTCCCCG,+,0.00),293(CGCCCTCCCCGG,+,0.00),371(CCGGGACCGCGG,-,0.00),377(CCGCGGAGGCGG,-,0.00) 99(TCGGCGCC,+,0.00) -145(CAGCGCCAGCAC,+,0.00) -38(AGTACGCG,-,0.00) 218(CCCGCGGC,-,0.00) 269(TCGTGCGG,+,0.00),515(CGTCACGA,-,0.00) -78(CCGCGGCTTCCG,-,0.00) 328(CGTCGCTG,+,0.00) -83(GTCCGCCG,-,0.00) 96(CCCTCGGCGCCC,-,0.00) 28(CGCAGGCTCCGC,-,0.00),54(CGCTGCCGCCGC,-,0.00) 212(CGCGGGCCCGCG,+,0.00),212(CGCGGGCCCGCG,-,0.00) 101(GGCGCCCTGGGC,+,0.00),132(GCCCCTGGCCGC,-,0.00) -57(GCCTCGCACC,-,0.00) 561_WT_peak_6014 chr5 170814237 170814611 + 170 NA promoter-TSS (NM_199185) promoter-TSS (NM_199185) -284 NM_002520 4869 Hs.557550 NM_002520 HPRD:01246 NPM1 B23|NPM nucleophosmin (nucleolar phosphoprotein B23, numatrin) protein-coding 0.066845 0.560000 127(GCGGGAGGCCGG,-,0.00) 89(CCGACGCC,+,0.00) 111(GCTGCGCA,+,0.00) 123(CTTGGCGG,+,0.00) 561_WT_peak_1312 chr11 61735554 61736134 + 170 NA promoter-TSS (NM_002032) promoter-TSS (NM_002032) -712 NM_002032 2495 Hs.524910 NM_002032 HPRD:00615 FTH1 FHC|FTH|FTHL6|HFE5|PIG15|PLIF ferritin, heavy polypeptide 1 protein-coding 0.062069 0.611015 -35(GGTTTCGGGTCC,-,0.00) 93(CCGCCTCCCCGG,+,0.00) 67(GGGCCGGGTT,+,0.00) 154(GCTTCGCACC,-,0.00) 561_WT_peak_722 chr1 212459111 212459726 + 170 NA 5' UTR (NM_006243, exon 1 of 13) 5' UTR (NM_006243, exon 1 of 13) 539 NM_006243 5525 Hs.744012 NM_006243 HPRD:03384 PPP2R5A B56A|PR61A protein phosphatase 2, regulatory subunit B', alpha protein-coding 0.110569 0.719156 -92(TCACCCCCCTCC,+,0.00),-89(CCCCCCTCCGCC,+,0.00),95(TCCCCCGCCTCC,+,0.00),98(CCCGCCTCCTCC,+,0.00) 215(CCGCCATCTCGG,+,0.00) 13(GGCGGCGA,-,0.00),187(TCGTCGCC,+,0.00),190(TCGCCGCC,+,0.00) 259(TCGGTCCG,-,0.00) -162(CCCCCGCC,-,0.00),-79(CCCCCGCC,-,0.00),96(CCCCCGCC,-,0.00),198(GGCGGGGG,+,0.00) 107(TCCTGCCG,+,0.00) -88(CCCCCTCCGCCC,+,0.00) 247(TTCACCCG,-,0.00) 40(CCGGGGCCGGAG,+,0.00),56(GTGGGGCCGGGG,+,0.00),341(CGCTGCCCCAGC,-,0.00) 256(AAATCGGTCC,-,0.00) 153(GCTGCCAAGC,+,0.00),306(GTTTCGCAGC,-,0.00) 321(CAGCCAGGCAGA,-,0.00) 561_WT_peak_5240 chr3 127317247 127317601 + 170 NA intron (NR_073375, intron 1 of 15) CpG 224 NR_073375 4171 Hs.477481 NM_004526 HPRD:00303 MCM2 BM28|CCNL1|CDCL1|D3S3194|MITOTIN|cdc19 minichromosome maintenance complex component 2 protein-coding 0.090395 0.664789 -162(AACCACTT,-,0.00) -74(GGGCGGGCGCCG,-,0.00) 91(CCCTGGGCTCCC,-,0.00) -43(TGCGCGCT,-,0.00) -28(CTCTGGCCCCGG,-,0.00) -12(GGGCGGCGCT,+,0.00),110(AGCTCGGCCC,-,0.00) -80(CGTGGCGG,+,0.00) -17(GCCCAGGGCGGC,-,0.00) 561_WT_peak_1229 chr11 18547752 18548764 + 170 NA intron (NM_006292, intron 1 of 9) CpG 245 NM_006292 7251 Hs.523512 NM_006292 HPRD:03229 TSG101 TSG10|VPS23 tumor susceptibility 101 protein-coding 0.060277 0.583416 136(AGAGGAGGGCGG,-,0.00) 298(GCTTCCGGCCCG,-,0.00),597(ACTTCCGGGCCG,-,0.00) 275(AGGTCGCT,+,0.00) 177(TCCACGCC,+,0.00) 220(CCCGTACG,+,0.00),222(CGTACGGG,-,0.00) 329(TGGGCCGGGA,-,0.00) 562(CGGCACCA,-,0.00),807(TAGTGCCG,+,0.00) 276(GGTCGCTA,+,0.00) 209(CCCTCCCAGCTC,+,0.00),640(GGATTGAGAGGG,-,0.00) -49(CAAAACTG,+,0.00) 350(GGGCGCGGAAGG,+,0.00) 149(TGGGCGGC,-,0.00) 259(GGGCGGGGTT,+,0.00) 440(ACCGCCATGACG,+,0.00),442(CGCCATGACGGC,-,0.00) 391(GCGTCGCAGC,-,0.00) 561_WT_peak_580 chr1 160807252 160807683 + 170 NA intron (NM_001166664, intron 4 of 7) intron (NM_001166664, intron 4 of 7) 25225 NM_001166664 51744 Hs.157872 NM_016382 HPRD:16121 CD244 2B4|NAIL|NKR2B4|Nmrk|SLAMF4 CD244 molecule, natural killer cell receptor 2B4 protein-coding 0.016241 0.562500 561_WT_peak_3985 chr2 25194784 25195478 + 170 NA promoter-TSS (NM_016544) promoter-TSS (NM_016544) 150 NR_034113 729723 Hs.436366 NR_034113 ENSG00000224165 DNAJC27-AS1 - DNAJC27 antisense RNA 1 ncRNA 0.076369 0.604317 111(ACGGGAAGGCGG,-,0.00) 317(GGGCTGCTGCTC,-,0.00) 0(GCCGGGGG,+,0.00) 141(TTTACCCT,-,0.00) -4(GGGAGCCGGGGG,+,0.00) -94(GGCGGAGCCGCT,+,0.00) 241(GGGCGGGTCT,+,0.00),312(GGGCCGGGCT,+,0.00) -151(CCGCCTCG,-,0.00),-72(CCGCCTCG,-,0.00) -37(GCCTGGCAGC,-,0.00) -40(GCTGCCTGGCAG,+,0.00) 561_WT_peak_597 chr1 162467622 162467988 + 170 NA exon (NM_144624, exon 1 of 7) exon (NM_144624, exon 1 of 7) 210 NM_144624 127933 Hs.127310 NM_144624 HPRD:12318 UHMK1 KIS|KIST|P-CIP2 U2AF homology motif (UHM) kinase 1 protein-coding 0.114754 0.724796 -118(AGGCGGCT,+,0.00),94(TAGCGGCT,+,0.00) -38(GGCGTCGC,-,0.00) 60(TCGGGCGG,-,0.00) 150(CCCCCGGC,-,0.00) 171(TCTTGCCG,+,0.00) -159(GCTTCCGGTGTC,-,0.00) -62(CGCGGGCCCGGC,-,0.00),-61(GCGGGCCCGGCC,+,0.00),32(GCGGAGCCGCCG,+,0.00) -97(TGCGGAGCCGCT,+,0.00),31(CGCGGAGCCGCC,+,0.00) 105(CCGCCTCG,-,0.00) -99(CCTGCGGAGC,+,0.00) -51(CCGGCCTGCCTC,+,0.00) 561_WT_peak_649 chr1 183441609 183441871 + 170 NA promoter-TSS (NR_040063) promoter-TSS (NR_040063) 234 NM_173156 9887 Hs.591463 NM_014837 HPRD:10723 SMG7 C1orf16|EST1C|SGA56M SMG7 nonsense mediated mRNA decay factor protein-coding 0.118321 0.737643 -28(GGCGGCGGAG,+,0.00) -148(CCGAGCGA,+,0.00) -91(GCCGCGGG,+,0.00) -44(GGGAAGACGCGG,+,0.00) -138(AGGAGCCGGAGG,+,0.00) -5(AGCGCGCA,+,0.00) -36(GCGGCGGCGGCG,+,0.00),-33(GCGGCGGCGGCG,+,0.00) -97(CGCGGTGCCGCG,+,0.00),-97(CGCGGTGCCGCG,-,0.00),-89(CGCGGGGCCGCT,+,0.00) -85(GGGCCGCTCC,+,0.00) -50(CTTCGCGG,+,0.00) -91(GCCGCGGGGC,+,0.00) 21(GAGGCCGGGCTG,+,0.00) 561_WT_peak_3029 chr17 8022940 8023248 + 170 NA promoter-TSS (NM_001165960) promoter-TSS (NM_001165960) -860 NM_001165960 59344 Hs.232770 NM_021628 HPRD:06231 ALOXE3 ARCI3|E-LOX|eLOX-3|eLOX3 arachidonate lipoxygenase 3 protein-coding 0.032468 0.398058 561_WT_peak_2366 chr14 102188286 102188606 + 170 NA Intergenic L1M5|LINE|L1 -8328 NR_026774 145200 Hs.150840 NR_026774 ENSG00000258512 LINC00239 C14orf72|NCRNA00239 long intergenic non-protein coding RNA 239 ncRNA 0.021875 0.414330 561_WT_peak_1795 chr12 92602435 92602705 + 170 NA Intergenic MIR|SINE|MIR -62897 NM_001731 694 Hs.255935 NM_001731 BTG1 - B-cell translocation gene 1, anti-proliferative protein-coding 0.007407 0.405904 561_WT_peak_2688 chr16 9172706 9173144 + 170 NA Intergenic MLT1J|LTR|ERVL-MaLR -12612 NM_014117 29035 Hs.221497 NM_014117 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding 0.011416 0.421412 87(GCGGGAAGAAGG,-,0.00) 561_WT_peak_1269 chr11 46692548 46692911 + 170 NA intron (NM_001142673, intron 17 of 17) intron (NM_001142673, intron 17 of 17) 29486 NM_004308 392 Hs.138860 NM_004308 HPRD:04108 ARHGAP1 CDC42GAP|RHOGAP|RHOGAP1|p50rhoGAP Rho GTPase activating protein 1 protein-coding 0.011019 0.461538 155(AGACGCAT,-,0.00) 152(TAGAGACG,-,0.00) 561_WT_peak_5318 chr3 169898677 169899497 + 170 NA intron (NM_024947, intron 1 of 14) CpG 450 NM_024947 80012 Hs.529592 NM_024947 HPRD:10149 PHC3 EDR3|HPH3 polyhomeotic homolog 3 (Drosophila) protein-coding 0.070732 0.632156 -65(AGAGGCCT,-,0.00) -155(TCGAGGCC,+,0.00) 192(GGGGTGGCGCCG,-,0.00) 246(GCCCTGCCCT,+,0.00) 102(CCCCCGCC,-,0.00) 137(CGGCACGA,-,0.00) 109(CGCTCTCAGGCC,+,0.00) -51(GAAACAGTAAGT,+,0.00) 407(GCCGCGCA,+,0.00) 401(CGCAGGGCCGCG,+,0.00) 602(AACTCGCCCC,-,0.00) 163(CGTGTCGG,+,0.00) 243(CCCGCCCTGCCC,+,0.00) 229(GAGGCCTGGCAG,+,0.00) 561_WT_peak_2448 chr15 42783363 42783668 + 170 NA promoter-TSS (NM_001284307) promoter-TSS (NM_001284307) -120 NM_001284307 64397 Hs.511143 NM_022473 HPRD:10317 ZNF106 SH3BP3|ZFP106|ZNF474 zinc finger protein 106 protein-coding 0.036066 0.486928 -21(CGTTGGAC,+,0.00) 561_WT_peak_3368 chr17 76744684 76745065 + 170 NA intron (NM_004762, intron 1 of 12) intron (NM_004762, intron 1 of 12) -25042 NM_001292018 9267 Hs.191215 NM_004762 HPRD:01630 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding 0.013123 0.426702 93(CAAAACCA,+,0.00) 38(CCTTCCTGTTTC,-,0.00) 561_WT_peak_4050 chr2 43823228 43823576 + 170 NA promoter-TSS (NM_001271644) promoter-TSS (NM_001271644) -217 NR_073394 63892 Hs.369592 NM_022065 HPRD:18177 THADA GITA thyroid adenoma associated protein-coding 0.063218 0.561605 -106(CCGGGGTGGCCG,-,0.00) 51(TGGACGCC,+,0.00) -117(TCGTGACG,+,0.00) -85(CGGTTTAG,-,0.00) 561_WT_peak_55 chr1 10532341 10532802 + 170 NA promoter-TSS (NM_004401) promoter-TSS (NM_004401) 42 NM_213566 1676 Hs.484782 NM_004401 DFFA DFF-45|DFF1|ICAD DNA fragmentation factor, 45kDa, alpha polypeptide protein-coding 0.095445 0.612554 225(AAGCCGCT,+,0.00),226(AGCCGCTT,-,0.00) -11(CGGCGTCCCCGG,+,0.00),48(GCGGGAGGCCGG,-,0.00) 77(TCGACCCC,+,0.00),186(GGCGTCGA,-,0.00) 112(TCGTTCCG,+,0.00) -64(GCGGCGCAGC,+,0.00),-64(GCGGCGCAGC,-,0.00),114(GTTCCGCAGC,-,0.00) 561_WT_peak_7028 chr8 59571682 59572651 + 170 NA promoter-TSS (NM_001144772) promoter-TSS (NM_001144772) -200 NM_001144772 8439 Hs.372000 NM_003580 HPRD:09117 NSMAF FAN neutral sphingomyelinase (N-SMase) activation associated factor protein-coding 0.105263 0.702062 49(TGGCCCGTCATC,+,0.00),572(AGGCCCGGAGGA,+,0.00) -17(CGCGGCCGCC,-,0.00),491(GGCGGCCGAG,+,0.00) -38(CGGCCTTCCGGG,+,0.00),418(CCGGGGAGGGCG,-,0.00),419(CGGGGAGGGCGG,-,0.00) -162(GGCGCCGA,-,0.00),-57(TCCACGCC,+,0.00) 159(CGCGTCCG,+,0.00) 200(TCCCGTCCCT,+,0.00) -19(CCCGCGGC,-,0.00),98(CCCCCGGC,-,0.00),251(CCCCCGGC,-,0.00) -68(GCGTGCCG,+,0.00) 321(CTGCTTCTTCCG,-,0.00) 104(GCCTCTCACCCC,+,0.00) 502(GCCCGACG,-,0.00) 331(CGGATAAA,+,0.00) 489(TGGGCGGC,-,0.00) -51(CCCGGACCCCGC,-,0.00),378(GGCAGGCCCCGC,-,0.00),636(CCAGGGCCAGCG,+,0.00) 24(CTCGGCTCCGCG,-,0.00) 242(CCGACTAG,-,0.00),505(CGACGCGG,+,0.00) 339(CGCCATGGAGGG,-,0.00) 383(GCCCCGCCGC,-,0.00),443(GCTGGGGAGC,+,0.00) 376(CAGGCAGGCCCC,-,0.00),462(CCGGCCTGGCTT,+,0.00) 561_WT_peak_7420 chr9 127623878 127624205 + 170 NA intron (NM_007209, intron 1 of 3) CpG-27016 199 NM_007209 11224 Hs.182825 NM_007209 HPRD:10200 RPL35 L35 ribosomal protein L35 protein-coding 0.110092 0.704268 -37(AGGCCCGGGC,-,0.00) 30(TGCGCGGC,-,0.00) -150(GCGTGGCCAGCC,+,0.00),-34(CCCGGGCCGCGC,-,0.00) 561_WT_peak_3877 chr19 52097676 52097902 + 170 NA promoter-TSS (NR_034159) promoter-TSS (NR_034159) -156 NR_034159 729975 Hs.716785 NR_034159 ENSG00000167765 LINC01530 - long intergenic non-protein coding RNA 1530 ncRNA 0.084071 0.634361 -38(CGTAGGCG,-,0.00) -70(CGGGACGA,-,0.00) -44(GGGAGTCGTAGG,+,0.00) -137(TGCGCAGC,-,0.00) 561_WT_peak_7057 chr8 75262685 75263077 + 170 NA intron (NM_018972, intron 1 of 5) CpG 263 NR_046346 54332 Hs.168950 NM_018972 HPRD:05963 GDAP1 CMT4|CMT4A|CMTRIA ganglioside induced differentiation associated protein 1 protein-coding 0.073980 0.623410 -18(GGCGGAGGGTGG,-,0.00) 44(GAAGCCGGTCCA,-,0.00) -21(GGCGGCGGAG,+,0.00) 157(ATGTGGCT,+,0.00) 40(CAGGGAAGCCGG,-,0.00),85(CCGGGCAGGCGC,-,0.00) 87(GGGCAGGCGCTC,-,0.00) 139(TCGATCGG,-,0.00) -151(TGGCTGAGAGGC,-,0.00),-134(GAGCAGAGAGGG,-,0.00) -96(GGCCGACG,-,0.00) 169(CCCAGGCTCCGC,-,0.00) -93(CGACGCGG,+,0.00),-24(CTTGGCGG,+,0.00) -27(GGCCTTGGCGGC,-,0.00) -149(GCTGAGAGGC,+,0.00) 561_WT_peak_438 chr1 145208935 145209288 + 170 NA promoter-TSS (NM_203458) promoter-TSS (NM_203458) -2 NM_203458 388677 Hs.655156 NM_203458 HPRD:14833 NOTCH2NL N2N notch 2 N-terminal like protein-coding 0.110482 0.709040 -15(GGCGGCTGAG,+,0.00),57(GGCGGCTGAG,+,0.00),69(GGCGGCCGAG,+,0.00) -16(AGGCGGCT,+,0.00) 101(GGAGTCGA,-,0.00) -109(GGGCCGGCGCTT,-,0.00) 51(TCGGGCGG,-,0.00) -111(TCGGGCCG,+,0.00) 82(CGGCGGAC,+,0.00) -78(GGGTGCCCAAGG,+,0.00) -64(GCGGGGCCGAGG,+,0.00),-36(GCGGGGCTTGCG,+,0.00) 75(CGAGGAGCGGCG,+,0.00) -38(GGGCGGGGCT,+,0.00) -74(GCCCAAGGCGGC,-,0.00) -67(GCGGCGGGGC,+,0.00),15(GCTTCGCTGC,-,0.00),123(GCTTCGGAGC,-,0.00) 561_WT_peak_1899 chr12 122238770 122239291 + 170 NA intron (NR_002809, intron 4 of 6) CpG 2360 NR_002809 338799 Hs.524804 NR_002809 ENSG00000212694 LINC01089 - long intergenic non-protein coding RNA 1089 ncRNA 0.086372 0.666667 120(CGCCCCGGAGCC,+,0.00) 297(AGGCGGCT,+,0.00) -141(CCGGGGGGACGG,-,0.00),132(CCGAGAAGCCGG,-,0.00) -28(TCGAAGCC,+,0.00),76(TGGACGCC,+,0.00) -73(GGCTGGGCCCGC,-,0.00) 123(CCCGGAGCCCCG,+,0.00) -88(AAAGCAGCCC,-,0.00),-51(AGCCCGGCCC,-,0.00) -39(CCGCGACG,-,0.00),132(CCGAGAAG,-,0.00) 324(GCTGCGAAGC,+,0.00) 561_WT_peak_2162 chr14 31677050 31677865 + 170 NA promoter-TSS (NM_015382) promoter-TSS (NM_015382) -728 NM_015382 25831 Hs.708017 NM_015382 HPRD:17098 HECTD1 EULIR HECT domain containing E3 ubiquitin protein ligase 1 protein-coding 0.084663 0.589461 193(AGGCGTCT,+,0.00) 69(GGCGTCGC,-,0.00) -126(CGGGTACG,+,0.00),166(CGCGCACG,+,0.00),183(CGCGTAAG,+,0.00) -152(CCGACCGC,+,0.00),219(CCGACCGC,+,0.00),356(CCGGTCGG,-,0.00) -87(CCCCCGCC,-,0.00) 38(CGTGGCTA,+,0.00) -12(CCCTGTCAGTCC,+,0.00) 71(CGTCGCAC,+,0.00) -132(CCAAACCG,+,0.00) -146(GCCGCGCA,+,0.00),52(TGCGCGCT,-,0.00) 106(ACCTGTCCCCGC,-,0.00),338(GCAGGCCCAGCG,+,0.00) -118(CCGCGTCG,-,0.00),-81(CCGCCTCG,-,0.00) -36(TGCGCCCTGGCC,+,0.00),33(GGCGCCGTGGCT,+,0.00) 561_WT_peak_1947 chr13 21714745 21715017 + 170 NA intron (NM_005870, intron 1 of 3) CpG 228 NM_005870 10284 Hs.524899 NM_005870 HPRD:04256 SAP18 2HOR0202|SAP18P Sin3A-associated protein, 18kDa protein-coding 0.077206 0.604396 -106(CCGATCGA,+,0.00) -25(GGCGCGGC,-,0.00) 63(GGTTCGCAGC,-,0.00) -22(GCGGCCTGTGTG,+,0.00) 561_WT_peak_3234 chr17 47269750 47270074 + 170 NA Intergenic CpG 16831 NM_031498 2793 Hs.181781 NM_031498 HPRD:06792 GNGT2 G-GAMMA-8|G-GAMMA-C|GNG8|GNG9|GNGT8 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 protein-coding 0.061728 0.624615 -48(CGCGGCCGCC,-,0.00) 100(AGCCACCT,-,0.00),143(AGCGGCTT,-,0.00) 36(TCGGTGGG,-,0.00) 109(GGGCTGTGTGGG,-,0.00) 74(CTGTTTTG,-,0.00) -80(GCCGCCCA,+,0.00) 561_WT_peak_4244 chr2 105654538 105654811 + 169 NA exon (NM_182640, exon 1 of 11) exon (NM_182640, exon 1 of 11) 191 NM_182640 64965 Hs.590900 NM_182640 HPRD:17602 MRPS9 MRP-S9|RPMS9|S9mt mitochondrial ribosomal protein S9 protein-coding 0.069597 0.609489 -68(AGGCCTCT,+,0.00),4(AAGCGGCT,+,0.00),5(AGCGGCTT,-,0.00) -115(TCGTACCG,+,0.00) -134(GTCCTACG,-,0.00) -59(GAAAACCG,+,0.00) 32(GTGGAGCCAGCG,+,0.00) -55(ACCGCGGCCC,-,0.00) 561_WT_peak_5446 chr4 38312010 38312448 + 169 NA Intergenic Intergenic 190654 NM_001253915 23216 Hs.176503 NM_015173 HPRD:18161 TBC1D1 TBC|TBC1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 protein-coding 0.009132 0.478360 561_WT_peak_6949 chr8 23145452 23145683 + 169 NA promoter-TSS (NM_001136108) promoter-TSS (NM_001136108) -45 NM_001136108 203069 Hs.458644 NM_001136108 ENSG00000104679 R3HCC1 - R3H domain and coiled-coil containing 1 protein-coding 0.112554 0.693966 -140(AAGCGGTT,+,0.00) -59(CCCAGGCCGCGC,-,0.00),4(CGCTGGCCCCTG,-,0.00) 31(GCTGCGACGC,+,0.00) -61(CCCCCAGGCCGC,-,0.00),-27(GCGGCCCGGGTC,+,0.00) 561_WT_peak_2103 chr13 113242241 113242720 + 169 NA promoter-TSS (NM_001286278) promoter-TSS (NM_001286278) 19 NM_006322 10426 Hs.224152 NM_006322 HPRD:10289 TUBGCP3 104p|GCP3|Grip104|SPBC98|Spc98|Spc98p tubulin, gamma complex associated protein 3 protein-coding 0.123173 0.710417 -117(TCGCCATCCTCG,+,0.00) 228(GGCCCCGGAGTC,+,0.00) 167(GTCGGCCGAG,+,0.00) -76(AGCCGCCA,-,0.00) -61(CGCACGCG,-,0.00),107(CGCGTGCG,+,0.00) 164(CCGGTCGG,-,0.00) 128(TCCCGGCCCT,+,0.00) 82(CCGCTTCTTCCC,-,0.00) 214(TGCGCGGA,-,0.00) -47(CCGCGGCCCGCG,+,0.00),9(CGCGGGCGCCGC,-,0.00) -105(CCCGGAGCCGTG,+,0.00),99(CGCGGCCGCGCG,-,0.00),231(CCCGGAGTCGCG,+,0.00) -48(ACCGCGGCCC,-,0.00),223(AGAGCGGCCC,-,0.00) 561_WT_peak_5984 chr5 150080158 150080632 + 169 NA intron (NM_018047, intron 1 of 10) CpG 274 NM_018047 55696 Hs.713564 NM_018047 HPRD:10186 RBM22 Cwc2|ZC3H16|fSAP47 RNA binding motif protein 22 protein-coding 0.078059 0.658947 20(TCGCCCTCCGCC,+,0.00),27(CCGCCCTCCTGC,+,0.00),145(CCATCCTCCTCC,+,0.00) 49(CTAGGCCGCC,-,0.00) 65(GCTCCTCCCCGG,+,0.00) -155(CGGCAGGA,-,0.00) 302(TAGCGCCG,-,0.00) 87(GCCGCGCC,+,0.00),123(TGCGCGGC,-,0.00) 60(CGCTGGCTCCTC,-,0.00) 125(CGCGGCTTCGCC,-,0.00) 46(AAGCTAGGCCGC,-,0.00) 561_WT_peak_5272 chr3 138327604 138327982 + 169 NA promoter-TSS (NM_018147) promoter-TSS (NM_018147) -126 NM_018147 55179 Hs.173438 NM_018147 HPRD:16874 FAIM FAIM1 Fas apoptotic inhibitory molecule protein-coding 0.132275 0.728232 49(GCGCCCGCCCGG,+,0.00) 187(GCGGTCGG,-,0.00) -9(CCCGCGGC,-,0.00),109(CCCCCGGC,-,0.00) 124(CGCTCTCGGCCC,+,0.00) 160(TGGGCGGC,-,0.00),184(TGCGCGGT,-,0.00) -110(CGCCGGCTGCGC,-,0.00),73(CGCCCGCTCCGC,-,0.00),137(GCTGCGCCGGCG,+,0.00),163(GCGGCGGCGGCG,+,0.00) 174(GGGCGGTGTT,+,0.00) -56(CCGAGTCG,-,0.00),-55(CGAGTCGG,+,0.00) 78(GCTCCGCACC,-,0.00) 561_WT_peak_5306 chr3 160167084 160167351 + 168 NA intron (NM_173084, intron 1 of 2) CpG 409 NM_173084 286827 Hs.212957 NM_173084 HPRD:15568 TRIM59 MRF1|RNF104|TRIM57|TSBF1 tripartite motif containing 59 protein-coding 0.059925 0.641791 74(AAGTGGCT,+,0.00) -20(CTGACCGA,+,0.00) 64(AGGGACGGGA,-,0.00) -16(CCGACTCG,-,0.00),-15(CGACTCGG,+,0.00) 561_WT_peak_37 chr1 6673459 6673722 + 168 NA promoter-TSS (NM_153812) promoter-TSS (NM_153812) -166 NM_153812 148479 Hs.516079 NM_153812 HPRD:10150 PHF13 PHF5|SPOC1 PHD finger protein 13 protein-coding 0.133080 0.757576 -96(CGCGGCCGAG,+,0.00) 85(CCGCCTCCCGCG,+,0.00) -52(GGCCTCGA,-,0.00) -98(CCCGCGGC,-,0.00) 35(TGCGCAGT,-,0.00),78(ACCGCGCC,+,0.00) -92(GCCGAGCCGGCG,+,0.00),-20(CCGGGGCCGCCG,+,0.00) -7(CGCGGAGCCTCA,+,0.00) -9(GCCGCGGAGC,+,0.00) 561_WT_peak_5448 chr4 39033955 39034109 + 168 NA promoter-TSS (NM_024943) promoter-TSS (NM_024943) 9 NM_024943 80008 Hs.374147 NM_024943 HPRD:08022 TMEM156 - transmembrane protein 156 protein-coding 0.000000 0.374194 -133(GCTTCCTGCTTT,-,0.00) 561_WT_peak_1236 chr11 27528092 27528593 + 168 NA promoter-TSS (NR_002832) promoter-TSS (NR_002832) -16 NM_018362 55327 Hs.91393 NM_018362 HPRD:17279 LIN7C LIN-7-C|LIN-7C|MALS-3|MALS3|VELI3 lin-7 homolog C (C. elegans) protein-coding 0.073852 0.647410 -27(CCGCCCACCTCC,+,0.00) 159(GGTGGCCGAG,+,0.00) -163(CGTAAGCG,-,0.00) 217(TAGGTCGG,-,0.00) 256(CCCCCGGC,-,0.00) -111(CGGCACAA,-,0.00) 232(CCGCTCCTTCCG,-,0.00) 32(TAGCGCCG,-,0.00) 86(GGGCTGAGGTGG,-,0.00) -120(CTCTGGCGCCGG,-,0.00),224(GCCTGGCTCCGC,-,0.00) -16(CGCCGAGCCTCG,+,0.00) 221(TCGGCCTGGCTC,+,0.00) 561_WT_peak_3876 chr19 51307556 51307825 + 168 NA intron (NM_001290149, intron 1 of 5) CpG 121 NM_032712 84798 Hs.256301 NM_032712 HPRD:14437 C19orf48 - chromosome 19 open reading frame 48 protein-coding 0.089219 0.640741 -35(CCCGGAGGGCGC,-,0.00) -157(GCCGCGGG,+,0.00) -42(GGCTCGCCCCGG,-,0.00) -162(GCTCCGCCGC,-,0.00),-157(GCCGCGGGGC,+,0.00),31(CCGTCGCAGC,-,0.00) 561_WT_peak_6991 chr8 41909456 41910070 + 168 NA promoter-TSS (NM_001099412) promoter-TSS (NM_001099412) -258 NM_001099413 7994 Hs.491577 NM_006766 HPRD:03244 KAT6A MOZ|MYST3|RUNXBP2|ZC2HC6A|ZNF220 K(lysine) acetyltransferase 6A protein-coding 0.086319 0.713821 155(GGAGGAGGAGGA,-,0.00) 12(AGGCCCGGCAGC,+,0.00) -138(CACGGCCGCC,-,0.00),34(GGCGGCCGAG,+,0.00) 413(AGCGACTT,-,0.00) 16(CCGGCAGCGCGG,-,0.00),76(GCCGGAGGGCGG,-,0.00),151(CAGGGGAGGAGG,-,0.00) -6(GGCGGCGA,-,0.00) -114(GAGCTCCAGCCG,+,0.00) 63(AGAGCCGGGA,-,0.00),81(AGGGCGGGGC,-,0.00),432(AGGGCGGGGC,-,0.00) -106(GCCGGGGG,+,0.00),-74(GCCGCGGG,+,0.00) -56(CGTCGCGA,+,0.00) -7(GGGCGGCGAGGG,-,0.00) 226(GTCAGACG,-,0.00) 3(GGGAGGCGGAGG,+,0.00) 435(GCGGGGCCTGGG,+,0.00) 183(GCTGGGGAGC,+,0.00) -41(GCGGCCTGGGGG,+,0.00),437(GGGGCCTGGGGG,+,0.00) 561_WT_peak_3017 chr17 7476190 7477093 + 167 NA intron (NR_037926, intron 12 of 21) CpG 617 NM_001204510 1973 Hs.129673 NM_001416 HPRD:04030 EIF4A1 DDX2A|EIF-4A|EIF4A|eIF-4A-I|eIF4A-I eukaryotic translation initiation factor 4A1 protein-coding 0.099668 0.681416 501(AGCGGCCT,-,0.00) 419(CCGGGCGGGCGG,-,0.00) 61(GGCCTCGA,-,0.00) -109(GCCGGGGG,+,0.00),202(GCCGGGGG,+,0.00),260(GGCGGGGG,+,0.00),418(GCCGGGCG,+,0.00),720(CCCGCGGC,-,0.00) 523(CGACGCTA,+,0.00),533(TCGCGACG,-,0.00) -122(TTCCGACG,-,0.00),-48(GTCCGACT,-,0.00),-15(GGCCGACG,-,0.00) 299(CGGCTAAA,+,0.00) 418(GCCGGGCGGGCG,+,0.00) 86(CGCGAAGCCCCG,+,0.00) -12(CGACGCGG,+,0.00),5(CGAGGCGG,+,0.00),71(CGAGGCGG,+,0.00),294(CGTCGCGG,+,0.00) -99(GCTGAGAGGC,+,0.00) 561_WT_peak_2100 chr13 111617419 111617962 + 167 NA Intergenic LTR10F|LTR|ERV1 -50236 NM_001286721 55608 Hs.525163 NM_017664 HPRD:12455 ANKRD10 - ankyrin repeat domain 10 protein-coding 0.005525 0.386029 310(CATAACCG,+,0.00) 561_WT_peak_1041 chr10 74008335 74008931 + 167 NA Intergenic Intergenic -25044 NM_019058 54541 Hs.744875 NM_019058 HPRD:09662 DDIT4 Dig2|REDD-1|REDD1 DNA-damage-inducible transcript 4 protein-coding 0.011745 0.552764 417(CCCCCGGC,-,0.00) 561_WT_peak_4777 chr21 35303789 35304099 + 167 NA non-coding (NR_038883, exon 1 of 3) non-coding (NR_038883, exon 1 of 3) 428 NR_038883 100506334 Hs.532855 NR_038883 ENSG00000237945 LINC00649 - long intergenic non-protein coding RNA 649 ncRNA 0.022581 0.511254 43(TCAACGCC,+,0.00) 44(CAACGCCAGCCC,+,0.00) -101(CGTCGCTC,+,0.00) 561_WT_peak_3221 chr17 45569577 45569950 + 167 NA non-coding (NR_033934, exon 1 of 6) non-coding (NR_033934, exon 1 of 6) 223 NR_033934 653479 Hs.537279 NR_033934 MRPL45P2 - mitochondrial ribosomal protein L45 pseudogene 2 pseudo 0.050938 0.582888 193(GCGCCCTCCGCC,+,0.00) -113(AAGCCTCT,+,0.00),146(AGCCGCAT,-,0.00) -110(CCTCTTCCCCGG,+,0.00),104(CCGGGAAGGGAG,-,0.00) 26(GACCACCAGCCC,+,0.00) 6(CGTCCCTA,+,0.00) 113(GAGCTGAGAGTG,-,0.00) 37(CAAAACCC,+,0.00) -139(GCTCCGCAGC,-,0.00) 561_WT_peak_5879 chr5 112849361 112849771 + 167 NA 5' UTR (NM_022828, exon 1 of 30) 5' UTR (NM_022828, exon 1 of 30) 175 NM_022828 64848 Hs.231942 NM_022828 HPRD:11690 YTHDC2 CAHL YTH domain containing 2 protein-coding 0.092683 0.666667 -18(GGCCCCGGATTC,+,0.00) 155(GGCGGCCGGG,+,0.00) 91(CCCGCGGC,-,0.00) -164(CGCCGGCCCTGG,-,0.00) 143(GGCCCTGGGGGC,-,0.00) 561_WT_peak_2921 chr16 80625073 80625347 + 167 NA Intergenic Intergenic -18505 NR_104666 101928276 Hs.149769 NR_104665 ENSG00000260737 LINC01227 - long intergenic non-protein coding RNA 1227 ncRNA 0.003650 0.421818 -104(CACAACCG,+,0.00) 561_WT_peak_1154 chr10 120839674 120840357 + 167 NA intron (NM_003750, intron 1 of 21) CpG 319 NM_003750 8661 Hs.523299 NM_003750 HPRD:03618 EIF3A EIF3|EIF3S10|P167|TIF32|eIF3-p170|eIF3-theta|p180|p185 eukaryotic translation initiation factor 3, subunit A protein-coding 0.105417 0.713450 -77(GGCGGCCGGG,+,0.00),213(GGCGGCGGAG,+,0.00) -160(CCGGGCAGGAGG,-,0.00),-119(CCGGGAGGGAGC,-,0.00),-72(CCGGGGACGCGG,-,0.00) 266(CCGCCCCAGCCC,+,0.00) 206(CGGGCCGGGC,-,0.00),400(CGGGCCGGGA,-,0.00) 209(GCCGGGCG,+,0.00),510(CCCGCGGC,-,0.00) 261(TCGGGCCG,+,0.00) 437(GTCCCACG,-,0.00) 411(AGGAGACGAAGG,+,0.00) 161(GCTGGGACAGCG,+,0.00),205(GCGGGCCGGGCG,+,0.00) 43(CCGCGACG,-,0.00),351(CTTGGCGG,+,0.00) 214(GCGGCGGAGC,+,0.00) 174(CGGGCAGGCCGC,-,0.00) 561_WT_peak_6476 chr6 134496115 134496448 + 167 NA promoter-TSS (NM_005627) promoter-TSS (NM_005627) -247 NM_001291995 6446 Hs.510078 NM_005627 HPRD:04264 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding 0.129129 0.727545 -2(GGCGGAGGGCGC,-,0.00) -150(TGGCGGCT,+,0.00) 9(CGGGGAGGGCCG,-,0.00),151(CCCTCTCCCCGG,+,0.00) -107(GAGGGCGAGCCC,+,0.00) -93(GGCGGGGG,+,0.00) -125(CGGTTCTG,-,0.00) -38(CCATCGGCTCCT,-,0.00) 108(TGCGCGGC,-,0.00) 116(GGCCACGGTGGC,-,0.00) 77(GGTTCGCAGC,-,0.00),95(GCTTCCCGGC,-,0.00) 561_WT_peak_4365 chr2 172290453 172291233 + 167 NA promoter-TSS (NM_001164821) promoter-TSS (NM_001164821) 82 NM_001164821 80067 Hs.659439 NM_025000 HPRD:08579 DCAF17 C2orf37 DDB1 and CUL4 associated factor 17 protein-coding 0.103846 0.719590 36(GGAGGAGGCGGG,-,0.00) 478(CGACCCGGAAGC,+,0.00) 431(CTCGGCGGCC,-,0.00),434(GGCGGCCCAG,+,0.00) 284(AAGCGGCT,+,0.00) 374(GGCCTCGA,-,0.00) 599(GACCGCCAGCCG,+,0.00) 66(AGGGCCGGGC,-,0.00),321(TCCCTGCCCG,+,0.00),454(GCCCGGCCCG,+,0.00) 514(GCCGGGCG,+,0.00) 35(CGGAGGAGGCGG,+,0.00) -112(GGGCAGTGAGGG,-,0.00) 202(CGTCGCAC,+,0.00) -46(ACCGCGCC,+,0.00) 43(GCGGGGCCGCGG,+,0.00),180(GGCCGGCCGCGC,-,0.00),277(GCGGTGCAAGCG,+,0.00),299(CCCTCGCCCCGC,-,0.00) 42(GGCGGGGCCGCG,+,0.00) -133(CCGAGAAG,-,0.00) 465(GCCTCCATGGGC,+,0.00) 561_WT_peak_3827 chr19 48673728 48673948 + 167 NA promoter-TSS (NM_000234) promoter-TSS (NM_000234) 22 NM_001289063 3978 Hs.1770 NM_000234 HPRD:00534 LIG1 - ligase I, DNA, ATP-dependent protein-coding 0.090909 0.710407 17(AGGGCCGGGC,-,0.00) 20(GCCGGGCCAGGC,+,0.00) 561_WT_peak_1155 chr10 120938088 120938333 + 167 NA intron (NM_006793, intron 1 of 6) CpG 167 NM_014098 10935 Hs.523302 NM_006793 HPRD:05305 PRDX3 AOP-1|AOP1|HBC189|MER5|PRO1748|SP-22|prx-III peroxiredoxin 3 protein-coding 0.093878 0.678862 61(CTCGGGCGCC,-,0.00) -127(AGGCCTCT,+,0.00),42(AGCCGCCA,-,0.00) -136(CCCGGAGGGAGG,-,0.00) -17(TCCACGCC,+,0.00) -163(CGGTTCTG,-,0.00) -113(GTTACCCG,-,0.00) 561_WT_peak_1933 chr12 133532743 133533066 + 166 NA promoter-TSS (NM_001164715) promoter-TSS (NM_001164715) -12 NM_001164715 100289635 Hs.29698 NM_183238 ENSG00000196458 ZNF605 - zinc finger protein 605 protein-coding 0.108359 0.691358 88(TGGCGGCT,+,0.00) -158(CCGCGATCCCCG,+,0.00),47(CCGGGGTCGCGG,-,0.00) -48(CGGCCCGA,-,0.00) -77(CCTCGGAC,+,0.00),-57(CGGCGGAC,+,0.00) -67(CGCAGGGCCGCG,+,0.00) -116(CCGCCTCG,-,0.00),86(CTTGGCGG,+,0.00) 83(CCCCTTGGCGGC,-,0.00) -122(GCCCCGCCGC,-,0.00) -124(CAGCCCCGCCGC,-,0.00) 561_WT_peak_4030 chr2 38894231 38894685 + 166 NA intron (NM_138801, intron 1 of 6) intron (NM_138801, intron 1 of 6) 1406 NM_138801 130589 Hs.435012 NM_138801 HPRD:13559 GALM GLAT|HEL-S-63p|IBD1 galactose mutarotase (aldose 1-epimerase) protein-coding 0.015419 0.461538 -5(GGCGTAGA,-,0.00) 561_WT_peak_6247 chr6 28912218 28912509 + 166 NA TTS (NR_103538).5 TTS (NR_103538).5 802 NR_103538 729583 Hs.453549 NR_103538 C6orf100 dJ25J6.5 chromosome 6 open reading frame 100 ncRNA 0.034364 0.414384 43(AGGCGTCT,+,0.00) 49(CTGTTTTG,-,0.00) 561_WT_peak_2673 chr16 3355022 3355445 + 166 NA promoter-TSS (NM_153028) promoter-TSS (NM_153028) -200 NM_153028 7627 Hs.513292 NM_153028 HPRD:03278 ZNF75A - zinc finger protein 75a protein-coding 0.111111 0.674528 -13(CCGAGAACGCGG,-,0.00) -67(GGCGGCGA,-,0.00),-64(GGCGACGA,-,0.00),85(GCGACGCC,+,0.00) 51(CCGCCCGA,+,0.00) -25(GCCGCGGG,+,0.00) 83(GTGCGACG,-,0.00) -141(CAAAACCC,+,0.00) 21(CTTACCCG,-,0.00) -128(GGGCCGCTGT,+,0.00),-8(AACGCGGCGC,-,0.00),47(AACGCCGCCC,-,0.00) 7(GCTGGGAGGC,+,0.00) -32(CGGCCGGGCCGC,-,0.00) 561_WT_peak_1386 chr11 66886717 66886985 + 166 NA non-coding (NR_027473, exon 1 of 21) non-coding (NR_027473, exon 1 of 21) 111 NR_027473 22992 Hs.124147 NM_012308 HPRD:05741 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine (K)-specific demethylase 2A protein-coding 0.089552 0.698885 24(GGAGGAGGGGCA,-,0.00) 21(CCGGGAGGAGGG,-,0.00) 85(GCCGGGGG,+,0.00) 95(TCGTCCCG,+,0.00) 22(CGGGAGGAGGGG,+,0.00) -139(GTCTGACG,-,0.00) -63(GCGGCGGCGGCG,+,0.00),-60(GCGGCGGCGGCG,+,0.00),-57(GCGGCGGCGGCG,+,0.00) -33(CCTTCCCAGC,-,0.00) 561_WT_peak_5431 chr4 26077901 26078207 + 166 NA Intergenic Intergenic 162240 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52 small integral membrane protein 20 protein-coding 0.006536 0.420195 92(CGGGTAAG,+,0.00) 561_WT_peak_2195 chr14 50328636 50329105 + 166 NA Intergenic CpG -9331 NM_004713 9147 Hs.655964 NM_004713 HPRD:08494 NEMF NY-CO-1|SDCCAG1 nuclear export mediator factor protein-coding 0.044776 0.487234 13(GCCGCGGG,+,0.00) 97(TGGGTAAA,+,0.00) 561_WT_peak_7069 chr8 94752769 94753542 + 166 NA promoter-TSS (NM_203390) promoter-TSS (NM_203390) 69 NM_203390 389677 Hs.606916 NM_203390 HPRD:14213 RBM12B MGC:33837 RNA binding motif protein 12B protein-coding 0.065977 0.578811 290(CCCTCCGGTCCG,-,0.00) 68(CGCGGCCGCC,-,0.00) 372(GCGCTGCCGCTC,-,0.00) 365(CGCACGCG,-,0.00) 111(GCCCAGCCCT,+,0.00) 126(CCCCCGGC,-,0.00) 43(CGGCAGGA,-,0.00) 91(CCCGTTCTTCCG,-,0.00) 394(CCTCGCTA,+,0.00) 187(AGTCGGAC,+,0.00),562(CGGCGGAC,+,0.00) 241(CAAAACAG,+,0.00) 87(TTTCCCCG,-,0.00) 66(GGCGCGGC,-,0.00) 74(CGCCGGTCCCGC,-,0.00) 412(GGCGGAGCCCCG,+,0.00) 184(CCGAGTCG,-,0.00),185(CGAGTCGG,+,0.00) 561_WT_peak_4358 chr2 170539581 170539917 + 166 NA intron (NM_001085447, intron 1 of 8) intron (NM_001085447, intron 1 of 8) 11182 NM_001085447 129881 Hs.370111 NM_001085447 ENSG00000154479 CCDC173 C2orf77 coiled-coil domain containing 173 protein-coding 0.008929 0.388724 561_WT_peak_3849 chr19 49588711 49589224 + 166 NA intron (NM_003089, intron 1 of 9) CpG 570 NM_003089 6625 Hs.467097 NM_003089 HPRD:01617 SNRNP70 RNPU1Z|RPU1|SNRP70|Snp1|U1-70K|U170K|U1AP|U1RNP small nuclear ribonucleoprotein 70kDa (U1) protein-coding 0.091618 0.657588 1(CGAGGAGGGCGC,-,0.00) -134(AGCGGCCT,-,0.00) 118(CCGCGTCCCCGC,+,0.00) -88(TGGACGCC,+,0.00) 98(CCCGCGGC,-,0.00) 40(GCCCGACG,-,0.00) 335(TGGTTTTG,-,0.00) -72(GGAAGCCGAAGC,+,0.00) 12(CTACGCGG,+,0.00) 102(CGGCCAGGCCCC,-,0.00) 561_WT_peak_5313 chr3 169482344 169483103 + 166 NA non-coding (NR_001566, exon 1 of 1) non-coding (NR_001566, exon 1 of 1) 125 NR_001566 7012 Hs.436182 NR_001566 ENSG00000270141 TERC DKCA1|PFBMFT2|SCARNA19|TR|TRC3|hTR telomerase RNA component ncRNA 0.096179 0.636842 134(CCGGGAGGGGCG,-,0.00) 268(CGCCTACG,+,0.00) 77(CCGACCGC,+,0.00),382(CCGACCGC,+,0.00),437(TCGGGCGG,-,0.00) 15(CCCGCGGC,-,0.00),349(GCCGGGCG,+,0.00) -64(TCGCGCCG,+,0.00) 314(CCCTCCCAGGCC,+,0.00) 38(CTTCGCGG,+,0.00),355(CGAGTCGG,+,0.00) 441(GCGGGCTGGTTG,+,0.00) 561_WT_peak_2956 chr16 89627109 89627529 + 166 NA promoter-TSS (NR_002450) promoter-TSS (NR_002450) 200 NM_033251 6137 Hs.410817 NM_000977 HPRD:06428 RPL13 BBC1|D16S444E|D16S44E|L13 ribosomal protein L13 protein-coding 0.102381 0.722090 -106(GGCCTGGCGCTT,-,0.00) 236(CCCGCGGC,-,0.00) 231(TCGTGCCC,+,0.00) -26(GGCGCGGC,-,0.00) 238(CGCGGCTGCGCC,-,0.00) 89(GCAGCCATGGCG,+,0.00),91(AGCCATGGCGCC,-,0.00) 561_WT_peak_3274 chr17 57642675 57642887 + 166 NA promoter-TSS (NM_001166301) promoter-TSS (NM_001166301) -105 NM_001166301 79665 Hs.29403 NM_024612 HPRD:06346 DHX40 DDX40|PAD DEAH (Asp-Glu-Ala-His) box polypeptide 40 protein-coding 0.094340 0.652582 -62(GTCTTCGGGCCC,-,0.00) -40(CTCAGCCGCC,-,0.00) -120(GGCGTTGA,-,0.00),-91(TCGGCGCC,+,0.00) 22(CGGCTCGA,-,0.00) -102(CGTCGCGA,+,0.00) -94(CCTTCGGCGCCG,-,0.00) -36(GCCGCCCA,+,0.00) 561_WT_peak_2660 chr16 2563945 2564326 + 165 NA exon (NM_001198569, exon 2 of 4) exon (NM_001198569, exon 2 of 4) 264 NM_001694 527 Hs.389107 NM_001694 HPRD:00162 ATP6V0C ATP6C|ATP6L|ATPL|VATL|VPPC|Vma3 ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c protein-coding 0.141732 0.722513 -59(CCCGCCTCCGCC,+,0.00) 52(CTCGGCCGCC,-,0.00) -99(CCGCCCGCCCGC,+,0.00) -105(TCGCCGCC,+,0.00) -77(GCCCGGCCCG,+,0.00),191(GCCCGGGCCT,+,0.00) -61(CCCCCGCC,-,0.00),103(GGCGGGGG,+,0.00) -81(TCGTGCCC,+,0.00) 26(GCTTCGTTTTTC,-,0.00) 9(AGAGCGGCCC,-,0.00) -46(CCGCCTCG,-,0.00) 38(GCCGTCATGGGC,+,0.00),56(GCCGCCATGGTC,+,0.00) -108(CCTTCGCCGC,-,0.00) 561_WT_peak_7554 chrX 54070380 54070845 + 165 NA promoter-TSS (NM_001184898) promoter-TSS (NM_001184898) -5 NM_001184897 23133 Hs.133352 NM_015107 HPRD:06599 PHF8 JHDM1F|MRXSSD|ZNF422 PHD finger protein 8 protein-coding 0.111828 0.641631 164(CGGCCCGAAAAG,+,0.00) 173(AAGTCGCT,+,0.00) -124(CGCGTCGA,-,0.00),81(GGCGTCGT,-,0.00) -47(CGGCGCCAGCCG,+,0.00) 61(CGCCCGGC,-,0.00) 97(CGGCAGGA,-,0.00),164(CGGCCCGA,-,0.00) 86(CGTCGCTG,+,0.00) 254(AGGCGGAGAGGG,-,0.00) 152(GTCCGAGG,-,0.00) 125(CGGGGAAA,+,0.00) -48(GCGGCGCCAGCC,+,0.00),89(CGCTGGGCCGGC,-,0.00) 145(CCGCCACG,-,0.00) 144(GCCGCCACGTCC,+,0.00) 561_WT_peak_4524 chr2 241525665 241525997 + 165 NA promoter-TSS (NM_023083) promoter-TSS (NM_023083) -98 NR_103792 101752400 Hs.585987 NR_103792 ENSG00000260942 CAPN10-AS1 locus959 CAPN10 antisense RNA 1 (head to head) ncRNA 0.102410 0.675676 -98(AGCGCCGGAAGC,+,0.00) 133(CTCCGCCGCC,-,0.00) -5(AGGTGGCT,+,0.00) 46(CCGACACCCCGG,+,0.00),93(CGGCCCTCCGGG,+,0.00) -123(CCCGCGGC,-,0.00) 55(CGGCCCGA,-,0.00) 136(CGCCGCCCCCGG,-,0.00) -15(AACTCGGCCG,-,0.00) -120(GCGGCCACGGCC,+,0.00) -110(CCTCCGCAGC,-,0.00),-51(GCGGCGGCGC,+,0.00),132(GCTCCGCCGC,-,0.00) 561_WT_peak_6768 chr7 99613140 99613484 + 165 NA 5' UTR (NM_003439, exon 1 of 6) 5' UTR (NM_003439, exon 1 of 6) 117 NM_001287054 7586 Hs.615360 NM_003439 HPRD:03161 ZKSCAN1 9130423L19Rik|KOX18|PHZ-37|ZNF139|ZNF36|ZSCAN33 zinc finger with KRAB and SCAN domains 1 protein-coding 0.095930 0.715942 -143(GGACCCGGAAGC,+,0.00) 25(AGGCCGCT,+,0.00) -62(GGCGTCGG,-,0.00) -26(TCGGCCGG,-,0.00) 76(AGGGCGGGGC,-,0.00) -119(CGGAAGACGAGG,+,0.00) 68(GGGGTGGGAGGG,-,0.00) -129(GGCGCGGT,-,0.00) 111(GCTCCGCAGC,-,0.00) 20(CCCCCAGGCCGC,-,0.00),144(GCGGCCCCGCTG,+,0.00) 561_WT_peak_6565 chr7 303493 304025 + 165 NA Intergenic Intergenic -26377 NM_001195127 100288524 Hs.702860 NM_001195127 WI2-2373I1.2 - forkhead box L1-like protein-coding 0.056391 0.684803 -91(AAGCGGCT,+,0.00),15(AAGCGGCT,+,0.00),16(AGCGGCTA,-,0.00),121(AAGCGGCT,+,0.00),174(AAGCGGCT,+,0.00) -135(CAGCCCCAGCGC,+,0.00),-82(CAGCCCCAGCGC,+,0.00),-29(CAGCCCCAGCGC,+,0.00),24(CAGCCCCAGCGC,+,0.00),77(CAGCCCCAGCGC,+,0.00),289(CAGCCCCAGCGC,+,0.00),342(CAGCCCCAGCGC,+,0.00) 561_WT_peak_7526 chrX 41193389 41194212 + 165 NA intron (NM_001193417, intron 1 of 15) CpG 1149 NM_001193416 1654 Hs.743263 NM_001356 HPRD:02154 DDX3X DBX|DDX14|DDX3|HLP2 DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked protein-coding 0.095990 0.656553 251(GGCGGAGGGGGA,-,0.00) 221(TGGCGGCT,+,0.00) 110(CCGGGCTGGCGG,-,0.00),389(CGGCCTTCACGG,+,0.00) 165(GGGCTGTCGCCC,-,0.00),398(CGGCTGGCGCAG,-,0.00) 304(CCGACTGA,+,0.00),507(TCGCTCGG,-,0.00),585(TCGGGCGG,-,0.00) 207(CGGGACGA,-,0.00) 250(GGGCGGAGGGGG,-,0.00) 632(TTTTCCCG,-,0.00) 339(TGCGCAGC,-,0.00),546(TGGGCGGC,-,0.00) 280(CGCGGGGACGCG,+,0.00) 474(AACGCGGCCC,-,0.00),547(GGGCGGCGCT,+,0.00) -111(CTTCGCGG,+,0.00) 428(GGACCTGGCGGC,-,0.00) -89(GCTTAGCAGC,-,0.00) 17(CCGGGCTGGCTG,+,0.00),110(CCGGGCTGGCGG,+,0.00) 561_WT_peak_6323 chr6 42531425 42531788 + 165 NA promoter-TSS (NM_015255) promoter-TSS (NM_015255) -154 NM_015255 23304 Hs.529925 NM_015255 HPRD:09853 UBR2 C6orf133|bA49A4.1|dJ242G1.1|dJ392M17.3 ubiquitin protein ligase E3 component n-recognin 2 protein-coding 0.046832 0.532967 76(TTTTCCCG,-,0.00) -22(AGCCCCGCCC,-,0.00) 561_WT_peak_6104 chr6 13328866 13329108 + 165 NA promoter-TSS (NM_001143966) promoter-TSS (NM_001143966) -172 NM_001258457 51256 Hs.484678 NM_016495 HPRD:18165 TBC1D7 MGCPH|PIG51|TBC7 TBC1 domain family, member 7 protein-coding 0.082645 0.617284 66(GGGTTTTG,-,0.00) -104(CCCGCCGTGGGC,+,0.00) 561_WT_peak_7620 chrX 135962315 135962885 + 165 NA intron (NM_002139, intron 1 of 8) CpG 339 NR_028476 27316 Hs.380118 NM_002139 HPRD:02186 RBMX HNRNPG|HNRPG|RBMXP1|RBMXRT|RNMX|hnRNP-G RNA binding motif protein, X-linked protein-coding 0.070175 0.583187 19(TCGCCCCGCTCC,+,0.00) 347(TGGCGGCT,+,0.00),379(AAGCCGCT,+,0.00),380(AGCCGCTA,-,0.00) 130(TCGACCCC,+,0.00) -30(TAGCGCCAGCGC,+,0.00) 154(TAGGTCGG,-,0.00) 393(ACTGCGCA,+,0.00) 375(CGCGAAGCCGCT,+,0.00) 374(CCGCGAAG,-,0.00) 561_WT_peak_2189 chr14 50086922 50087677 + 165 NA promoter-TSS (NM_002408) promoter-TSS (NM_002408) 104 NM_001001 6166 Hs.444749 NM_001001 RPL36AL RPL36A ribosomal protein L36a-like protein-coding 0.088742 0.625661 25(AGCCGCCA,-,0.00),166(AGCCGCTA,-,0.00) 347(TCGGTCGC,-,0.00) 382(AGGGGCGGGC,-,0.00) 423(GCCGCGGG,+,0.00) -118(TAGCTACG,-,0.00),479(CGTCGCTC,+,0.00) -140(GCTGGGGCAGCG,+,0.00),5(GGCGCGCCCCGC,-,0.00) 411(GGGCCGCGGT,+,0.00) 476(CCGCGTCG,-,0.00) 26(GCCGCCATGCCT,+,0.00),326(GGCCACGGCGGT,-,0.00) 219(CCTTCGCAGC,-,0.00),423(GCCGCGGGGC,+,0.00) 561_WT_peak_3683 chr19 18668182 18668665 + 165 NA promoter-TSS (NM_001171949) promoter-TSS (NM_001171949) -149 NM_001171949 79036 Hs.714548 NM_024069 HPRD:14526 KXD1 C19orf50|KXDL|MST096|MSTP096 KxDL motif containing 1 protein-coding 0.051760 0.518595 124(TCTTCCGGGCCG,-,0.00) 266(AAGCGGCT,+,0.00) 232(GCCCCGCCCT,+,0.00) 224(CCGTCTAAGCCC,+,0.00) 130(GGGCCGCTTT,+,0.00),231(AGCCCCGCCC,-,0.00) 287(CCGCCACG,-,0.00) 561_WT_peak_7558 chrX 55934417 55934706 + 165 NA Intergenic Intergenic 190451 NM_006064 10325 Hs.50282 NM_006064 HPRD:06710 RRAGB RAGB|bA465E19.1 Ras-related GTP binding B protein-coding 0.038062 0.572414 -115(AGCCACTT,-,0.00) 88(GCGGGGAGGCCG,-,0.00) -69(GGCGTCGC,-,0.00) -22(TTTACCGG,-,0.00) -85(TGGGCGGC,-,0.00) 21(GCGGGGCCTGCC,+,0.00) -84(GGGCGGCGCC,+,0.00) 561_WT_peak_2491 chr15 55611178 55611614 + 165 NA 5' UTR (NM_004855, exon 1 of 12) 5' UTR (NM_004855, exon 1 of 12) 263 NM_004855 9488 Hs.612814 NM_004855 HPRD:04988 PIGB GPI-MT-III|PIG-B phosphatidylinositol glycan anchor biosynthesis, class B protein-coding 0.077982 0.613272 -14(GCCCGTTCCCGG,+,0.00) 250(GAGCGCCAGGCG,+,0.00) 139(GCCGGGGG,+,0.00),261(GCCGCGGG,+,0.00) 193(CGGCAAGA,-,0.00) 14(GAGCGACG,-,0.00) 179(CAGAACCG,+,0.00) -108(CCGCCAAG,-,0.00) 561_WT_peak_2165 chr14 32672324 32673010 + 165 NA promoter-TSS (NR_125730).4 promoter-TSS (NR_125730).4 -192 NR_125730 103625684 NR_125730 RNU6-2 U6-2 RNA, U6 small nuclear 2 snRNA 0.074344 0.554585 410(CGGCCCGGGGTC,+,0.00) 404(GAGGGCCGGCCC,+,0.00) 241(CGCGTAGG,+,0.00) 255(GCCGGGGG,+,0.00) 273(TCGTGCCG,+,0.00) 243(CGTAGGAC,+,0.00) 183(TTTACCTG,-,0.00),227(TGGGTAAA,+,0.00) -125(ACTGCGCA,+,0.00),59(ACCGCGCC,+,0.00) 414(CCGGGGTCGGCG,+,0.00) 240(CCGCGTAG,-,0.00) 277(GCCGCGGAGC,+,0.00) 561_WT_peak_3972 chr2 15317158 15317630 + 165 NA intron (NR_052013, intron 50 of 50) intron (NR_052013, intron 50 of 50) 384078 NR_052013 51594 Hs.467759 NM_015909 HPRD:10473 NBAS NAG|SOPH neuroblastoma amplified sequence protein-coding 0.014831 0.427061 16(CAAAACCA,+,0.00) 561_WT_peak_4616 chr20 34541740 34542283 + 164 NA exon (NM_033630, exon 2 of 2) exon (NM_033630, exon 2 of 2) 537 NM_033630 51282 Hs.584909 NM_016558 SCAND1 RAZ1|SDP1 SCAN domain containing 1 protein-coding 0.097606 0.691176 173(AGGCCTCT,+,0.00),224(AACCGGCT,+,0.00),294(AGCCGCCA,-,0.00) 256(GCCGCGGG,+,0.00) 232(CCTTCCAGTTTC,-,0.00) 359(TGCGCGGG,-,0.00) 10(GCGGGGCCTGGT,+,0.00),246(CGGTGGCACCGC,-,0.00) -15(CGTCTCGG,+,0.00),275(CCGCCAAG,-,0.00) 561_WT_peak_3222 chr17 45798576 45798939 + 164 NA Intergenic Intergenic -11853 NM_013351 30009 Hs.272409 NM_013351 HPRD:05355 TBX21 T-PET|T-bet|TBET|TBLYM T-box 21 protein-coding 0.041322 0.587912 -1(GGCGGAGGGAGA,-,0.00) -10(CCGGGGAGGGGC,-,0.00) -64(GGGAAGGAGGGG,+,0.00) 561_WT_peak_3567 chr19 2257923 2258097 + 164 NA Intergenic AluY|SINE|Alu -1588 NM_144616 126306 Hs.330742 NM_144616 HPRD:08724 JSRP1 JP-45|JP45 junctional sarcoplasmic reticulum protein 1 protein-coding 0.051724 0.554286 -150(TCGTGGCG,+,0.00) -149(CGTGGCGG,+,0.00),-125(CTACTCGG,+,0.00) 561_WT_peak_6877 chr7 143318135 143318907 + 164 NA promoter-TSS (NM_173678) promoter-TSS (NM_173678) -21 NM_173678 285966 Hs.743565 NM_173678 HPRD:07117 FAM115C FAM139A family with sequence similarity 115, member C protein-coding 0.036269 0.498060 195(CGTCGCTT,+,0.00) 561_WT_peak_5267 chr3 135915306 135916100 + 164 NA Intergenic CpG -1015 NM_018133 55167 Hs.18631 NM_018133 HPRD:08550 MSL2 MSL-2|MSL2L1|RNF184 male-specific lethal 2 homolog (Drosophila) protein-coding 0.086902 0.659119 -96(TCAGCCTGCTCG,+,0.00) -160(CTCCGCCGCC,-,0.00) 267(CCGCCCTCGCGG,+,0.00),352(CCGGGAAGGCTG,-,0.00) 248(CCGCGCCAGGCC,+,0.00) -139(CGCGTGCG,+,0.00) 302(CCGACCGC,+,0.00) 264(GCCCCGCCCT,+,0.00) 567(TCGTGCGG,+,0.00) 526(CGTCGGAC,+,0.00) -114(GAAAACCG,+,0.00) -108(CGGATAAA,+,0.00) -126(ACCGCCCA,+,0.00),-47(ACTGCGCA,+,0.00),247(GCCGCGCC,+,0.00) 345(CGCCGAGCCGGG,+,0.00),374(CGTGGCTGCGCG,-,0.00) 205(AACGCGGCCT,-,0.00),263(AGCCCCGCCC,-,0.00),420(GGGCCGCGTT,+,0.00) -161(GCTCCGCCGC,-,0.00) 250(GCGCCAGGCCCC,-,0.00) 561_WT_peak_3717 chr19 33667822 33668164 + 164 NA Intergenic CpG -17606 NM_002333 4037 Hs.515340 NM_002333 LRP3 - low density lipoprotein receptor-related protein 3 protein-coding 0.073099 0.565598 145(AGAGGCCT,-,0.00) -117(CGCGTGCG,+,0.00) 101(TGTACCCG,-,0.00) -23(GGCGCCGTGGCT,+,0.00) 561_WT_peak_283 chr1 67798683 67799179 + 164 NA intron (NR_047583, intron 7 of 13) intron (NR_047583, intron 7 of 13) 25884 NM_001258215 3595 Hs.479347 NM_001559 HPRD:03383 IL12RB2 - interleukin 12 receptor, beta 2 protein-coding 0.006048 0.356137 76(CTTACCCG,-,0.00) 561_WT_peak_6877-2 chr7 143319217 143319567 + 164 NA intron (NM_173678, intron 1 of 6) intron (NM_173678, intron 1 of 6) 850 NM_173678 285966 Hs.743565 NM_173678 HPRD:07117 FAM115C FAM139A family with sequence similarity 115, member C protein-coding 0.042857 0.592593 -139(ATGTGGCT,+,0.00) 148(AACGCTGCCC,-,0.00) 561_WT_peak_3611 chr19 9250970 9251424 + 164 NA non-coding (NR_102435, exon 1 of 7) non-coding (NR_102435, exon 1 of 7) 141 NR_102435 57693 Hs.465829 NM_020933 HPRD:11706 ZNF317 - zinc finger protein 317 protein-coding 0.074890 0.589011 -102(TAGACGCC,+,0.00),-36(GGAGTCGA,-,0.00) -125(TCCTCTCCGCCC,+,0.00),205(GGACTAAGAGGG,-,0.00) 561_WT_peak_1270 chr11 47198088 47198493 + 164 NA TTS (NM_001184975) TTS (NM_001184975) 386 NM_001242832 84364 Hs.436204 NM_032389 HPRD:06069 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP-ribosylation factor GTPase activating protein 2 protein-coding 0.091358 0.647783 16(CCGCCCTTCTCC,+,0.00) 141(CTCCGCCGCC,-,0.00) 102(AAGCCTCT,+,0.00) 212(CGGGGAGGGCGG,-,0.00) -57(GGCGGCGA,-,0.00) -118(CGTACGTG,-,0.00) 193(GCCGCGGG,+,0.00) 44(CGGGACGA,-,0.00) 128(CGGTCTTG,-,0.00),170(CACAACCG,+,0.00) -28(CGAGTAAA,+,0.00) 211(GCGGGGAGGGCG,+,0.00) 140(GCTCCGCCGC,-,0.00) 561_WT_peak_6231 chr6 27858204 27858815 + 164 NA promoter-TSS (NM_003535) promoter-TSS (NM_003535) 61 NM_003535 8356 Hs.484990 NM_003535 HPRD:11911 HIST1H3J H3/j|H3FJ histone cluster 1, H3j protein-coding 0.062193 0.529412 140(CAGCTGCTTCCG,-,0.00) -41(CGGTTTTG,-,0.00),115(CGCTTTTG,-,0.00) 374(TTTACCTG,-,0.00) 121(TGCGCGCT,-,0.00) 561_WT_peak_330 chr1 94344386 94345019 + 164 NA promoter-TSS (NM_014597) promoter-TSS (NM_014597) 60 NM_014597 30836 Hs.85769 NM_014597 DNTTIP2 ERBP|FCF2|HSU15552|LPTS-RP2|TdIF2 deoxynucleotidyltransferase, terminal, interacting protein 2 protein-coding 0.074250 0.564669 382(GGCGGCGA,-,0.00) 415(CGTACCCG,-,0.00) -20(TCTGTCGG,-,0.00) 85(TTTGCCCG,-,0.00) 239(TCCGCGCA,+,0.00) 36(CGCGGCTCTGCG,-,0.00) 104(CGACGCGG,+,0.00) 286(GGCCAGGGCGGT,-,0.00) 42(TCTGCGAAGC,+,0.00),383(GCGGCGAAGC,+,0.00) -61(GGGGCCTGGGAG,+,0.00),108(GCGGCTTGGATG,+,0.00) 561_WT_peak_353 chr1 109234884 109235565 + 164 NA exon (NM_018061, exon 1 of 6) exon (NM_018061, exon 1 of 6) 289 NR_037185 55119 Hs.342307 NM_018061 HPRD:07664 PRPF38B NET1 pre-mRNA processing factor 38B protein-coding 0.082232 0.637830 126(TCCCCCCCCTCC,+,0.00) -72(GCTGCCGGCTCG,-,0.00),-15(TGGCCCGGGGTC,+,0.00) 215(AGGCGGCT,+,0.00) 5(GGCGTCGG,-,0.00),367(TCGTCGCC,+,0.00) 50(CCCCTTCTCCCG,-,0.00),131(CCCCTCCTTCCC,-,0.00),479(CGGAAGAGGGGG,+,0.00) 261(CGGCGCTA,+,0.00) -129(CGCCGGGCCCGC,-,0.00),251(GCGGCGGCGGCG,+,0.00),254(GCGGCGGCGGCG,+,0.00) 508(AAGGCGGCCC,-,0.00) 42(CGAGGCGG,+,0.00) 504(GGCGAAGGCGGC,-,0.00) 257(GCGGCGGCGC,+,0.00) -80(GCTCCCTGGCTG,+,0.00),39(CAGCGAGGCGGC,-,0.00) 561_WT_peak_6063 chr5 180650208 180650615 + 164 NA promoter-TSS (NR_039781) promoter-TSS (NR_039781) 148 NR_045218 90933 Hs.441488 NM_033549 HPRD:15558 TRIM41 RINCK tripartite motif containing 41 protein-coding 0.093366 0.671569 -9(AGCACCGAAAGC,+,0.00) -134(AGGGCCGGAA,-,0.00) 50(GGCGGGGG,+,0.00),94(CCCGCGGC,-,0.00) 207(CGGGGAAA,+,0.00) 8(GCCGCCAGGCGC,+,0.00) 561_WT_peak_4503 chr2 235181232 235181492 + 164 NA Intergenic L1ME3A|LINE|L1 222016 NM_006944 6694 Hs.444488 NM_006944 HPRD:04029 SPP2 SPP-24|SPP24 secreted phosphoprotein 2, 24kDa protein-coding 0.003846 0.383142 561_WT_peak_2481 chr15 51199253 51199574 + 164 NA Intergenic LTR43B|LTR|ERV1 -1456 NM_007347 23431 Hs.413366 NM_007347 HPRD:06258 AP4E1 CPSQ4|SPG51 adaptor-related protein complex 4, epsilon 1 subunit protein-coding 0.028037 0.437888 561_WT_peak_5965 chr5 141340401 141340653 + 164 NA Intergenic Intergenic -1900 NM_016580 51294 Hs.439474 NM_016580 HPRD:09287 PCDH12 VE-cadherin-2|VECAD2 protocadherin 12 protein-coding 0.027778 0.517787 -3(CAGCTCCAGCCC,+,0.00) -41(AAAACAGGAAGT,+,0.00) -56(CCGGGGACAGCC,+,0.00) 561_WT_peak_5217 chr3 119041876 119042195 + 163 NA promoter-TSS (NR_046748) promoter-TSS (NR_046748) -428 NR_046748 100874246 Hs.607097 NR_046748 ARHGAP31-AS1 - ARHGAP31 antisense RNA 1 ncRNA 0.119122 0.728125 -14(CCGCGCCCCCGG,+,0.00) -9(CCCCCGGC,-,0.00) -96(CAGCTTCCTCCC,-,0.00) 70(CGGGGAAA,+,0.00),87(CGGGGAAA,+,0.00) 138(GCCGCCCA,+,0.00) 48(GCGCGGCCACCG,+,0.00),108(CGCCGGCCCTGG,-,0.00) -85(CGCTGCTCCGCC,-,0.00) 112(GGCCCTGGGGGC,-,0.00) -102(GCGCCGCAGC,-,0.00) 561_WT_peak_1755 chr12 68583639 68584038 + 163 NA Intergenic Intergenic -30317 NM_000619 3458 Hs.856 NM_000619 HPRD:00957 IFNG IFG|IFI interferon, gamma protein-coding 0.007519 0.387500 -118(TGGTTTTG,-,0.00) 115(TGGGTAAA,+,0.00) 561_WT_peak_1445 chr11 85998158 85998489 + 163 NA Intergenic Intergenic 8948 NR_106813 102465452 NR_106813 MIR6755 hsa-mir-6755 microRNA 6755 ncRNA 0.000000 0.418675 561_WT_peak_6481 chr6 135375632 135376042 + 163 NA 5' UTR (NM_006620, exon 1 of 18) 5' UTR (NM_006620, exon 1 of 18) 199 NM_001145158 10767 Hs.378532 NM_006620 HPRD:06582 HBS1L EF-1a|ERFS|HBS1|HSPC276|eRF3c HBS1-like translational GTPase protein-coding 0.070732 0.596107 21(GATGCCGGGCCA,-,0.00) 152(AGGCCTCT,+,0.00) 165(GAGCGCCTGCGC,+,0.00) -30(CGGCATGA,-,0.00) 36(CGGCGGAGAGGG,-,0.00) -46(CGGGAAAA,+,0.00) 28(GGCCATGACGGC,-,0.00) 561_WT_peak_5445 chr4 38132907 38133167 + 163 NA intron (NM_001253912, intron 19 of 20) Tigger12c|DNA|TcMar-Tigger 11462 NM_001253915 23216 Hs.176503 NM_015173 HPRD:18161 TBC1D1 TBC|TBC1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 protein-coding 0.011538 0.409962 56(GAGCGCCTGCTC,+,0.00) -12(TGGTTTTG,-,0.00),13(GGGTTTTG,-,0.00) 561_WT_peak_7319 chr9 86322332 86323183 + 163 NA 5' UTR (NM_013438, exon 1 of 11) 5' UTR (NM_013438, exon 1 of 11) 411 NM_013438 29979 Hs.9589 NM_013438 HPRD:05440 UBQLN1 DA41|DSK2|PLIC-1|UBQN|XDRP1 ubiquilin 1 protein-coding 0.099882 0.664319 304(CTCGGCAGCC,-,0.00) -115(CCCCCATCCCGG,+,0.00) 439(GGCGTCGC,-,0.00) -100(GAGCCCCAGGCG,+,0.00),23(GGGCGCCAGCAC,+,0.00),295(GGTCAGGCGCTC,-,0.00) -109(TCCCGGCCCG,+,0.00) 16(GCCGCGGG,+,0.00) -126(TCCTGCCG,+,0.00),-106(CGGCCCGA,-,0.00) 5(CGGAGGCAGCGG,+,0.00),362(CCGCTTCCTCCT,-,0.00) 47(CGGCGCTA,+,0.00),223(TAGCAACG,-,0.00) 422(CGGGTAAC,+,0.00) 34(CCTTCGGCTCCG,-,0.00) 4(GCGGAGGCAGCG,+,0.00),106(GCGGCGGCGGCG,+,0.00),109(GCGGCGGCGGCG,+,0.00),234(GCAGGGCCACCG,+,0.00),399(CGCCGGCGCCGC,-,0.00) 93(GGCCATGGCTGT,-,0.00),430(GCGCCTGGCGGC,-,0.00) 303(GCTCGGCAGC,-,0.00) 561_WT_peak_975 chr10 43277672 43278250 + 163 NA promoter-TSS (NM_014753) promoter-TSS (NM_014753) 7 NM_014753 9790 Hs.10848 NM_014753 HPRD:10689 BMS1 ACC|BMS1L BMS1 ribosome biogenesis factor protein-coding 0.077855 0.611399 -129(CCTCCCTCCTCG,+,0.00) 102(CGGCGCCAGGCC,+,0.00) 258(CGCGGACG,+,0.00) 351(CCTTCTTGTTTC,-,0.00) 256(TGCGCGGA,-,0.00) 257(GCGCGGACGGCG,+,0.00) 113(CGCAGAGCCGCC,+,0.00) 116(AGAGCCGCCC,-,0.00) 119(GCCGCCCTGGCC,+,0.00) 104(GCGCCAGGCCGC,-,0.00) 561_WT_peak_6361 chr6 64281705 64282200 + 163 NA promoter-TSS (NM_003463) promoter-TSS (NM_003463) 35 NM_003463 7803 Hs.227777 NM_003463 HPRD:03349 PTP4A1 HH72|PRL-1|PRL1|PTP(CAAX1)|PTPCAAX1 protein tyrosine phosphatase type IVA, member 1 protein-coding 0.050505 0.524194 274(CCTGCATCCCGG,+,0.00) 310(CCCCCGCC,-,0.00) -23(CGGTCTTG,-,0.00) -32(CGGGTACA,+,0.00) 270(GCTTCCTGCATC,-,0.00) -102(AAAGCGCCCC,-,0.00) 561_WT_peak_2383 chr14 103799816 103800962 + 163 NA promoter-TSS (NM_001969) promoter-TSS (NM_001969) 50 NM_001969 1983 Hs.433702 NM_001969 HPRD:03417 EIF5 EIF-5|EIF-5A eukaryotic translation initiation factor 5 protein-coding 0.118674 0.697472 747(TCGCCCAGCTCC,+,0.00),856(TCCGCCTCCTCG,+,0.00) 44(AGGCCCGGAGTC,+,0.00),316(CACTCCGGGTCT,-,0.00) 639(CCCCCTGCCCGG,+,0.00),857(CCGCCTCCTCGG,+,0.00) 41(TCGAGGCC,+,0.00),151(GGCCTCGA,-,0.00),665(TCGACCCC,+,0.00) 778(CGCGGACG,+,0.00) 108(GCGGTCGG,-,0.00),706(CCGACCGC,+,0.00) 368(GGCGGGGG,+,0.00) -60(TCGTTCCG,+,0.00),673(TCGGGCCG,+,0.00) 472(CGTCGCAA,+,0.00),784(CGTCGCTG,+,0.00) 863(CCTCGGAC,+,0.00) 267(CCAAACCG,+,0.00) 379(GGGAGAGGAAGG,+,0.00),439(GGAAGCAGAAGG,+,0.00) -142(AGCGCGCA,+,0.00),-107(GGCGCGGC,-,0.00),-86(TGGGCGGT,-,0.00),709(ACCGCCCA,+,0.00),965(GGCGCGGC,-,0.00) 295(CCCCGGCCCCGC,-,0.00),576(GCGGCGGCGGCG,+,0.00) -105(CGCGGCCTCGCG,-,0.00),806(CGCTGCTCGGCG,-,0.00) -113(CGAGGCGG,+,0.00),348(CCGCGAAG,-,0.00) 196(GTCGCCATGACG,+,0.00),198(CGCCATGACGCC,-,0.00),305(GCCACCAGGGCC,+,0.00) 342(GCTGCGCCGC,+,0.00),342(GCTGCGCCGC,-,0.00) 561_WT_peak_6149 chr6 26188826 26189491 + 163 NA exon (NM_003539, exon 1 of 1) exon (NM_003539, exon 1 of 1) 146 NM_003539 8360 Hs.248179 NM_003539 HPRD:11914 HIST1H4D H4/b|H4FB|dJ221C16.9 histone cluster 1, H4d protein-coding 0.061654 0.525526 2(CTCAGCCGCC,-,0.00) 181(TTGACGCC,+,0.00) 45(CGCGTACA,+,0.00) 415(AGGGGCGGGA,-,0.00) 286(CCCTTTCCGCCC,+,0.00) -122(GAAAACCG,+,0.00),-29(TGGTTTTG,-,0.00) 361(GCCACGCAGC,-,0.00) 197(GAGCCAGGCGGC,-,0.00) 561_WT_peak_5300 chr3 156892500 156893118 + 163 NA Intergenic CpG -14327 NM_020307 57018 Hs.4859 NM_020307 CCNL1 ANIA6A|PRO1073|ania-6a cyclin L1 protein-coding 0.085761 0.592892 12(AGACCCGGCAGC,+,0.00) 175(AATCGGCT,+,0.00) 30(CGGGGGAGGCGA,-,0.00) -104(CGTCAGAC,+,0.00) 143(CAAATCCG,+,0.00) -142(TTTTCCCG,-,0.00),244(CTTACCCG,-,0.00),259(TTTACCCT,-,0.00) 165(TGCGCGGC,-,0.00),267(TGCGCGGC,-,0.00) 308(CGCGGCGCCGCC,+,0.00),308(CGCGGCGCCGCC,-,0.00) 69(GACCCCGCCC,-,0.00) 270(GCGGCCGTGGCG,+,0.00) 561_WT_peak_4539 chr20 1305978 1306332 + 163 NA non-coding (NR_040048, exon 1 of 4) non-coding (NR_040048, exon 1 of 4) 168 NR_040047 100507495 Hs.655785 NR_040047 ENSG00000234684 SDCBP2-AS1 - SDCBP2 antisense RNA 1 ncRNA 0.076271 0.594366 -87(TAGCGGCT,+,0.00) 62(TTGGTCGG,-,0.00) -124(AGGCCCGGGC,-,0.00) 29(CAGGTAAA,+,0.00),85(TTTACCGG,-,0.00),106(CGGGTGAA,+,0.00) -117(GGCGCGGT,-,0.00),102(TGCGCGGG,-,0.00) 0(AGCTGGCGCCGG,-,0.00) -71(GAACATGGCGGC,-,0.00) 70(GCTCCGCGGC,-,0.00) -129(CACCCAGGCCCG,-,0.00) 561_WT_peak_189 chr1 39456506 39456956 + 163 NA promoter-TSS (NM_024595) promoter-TSS (NM_024595) -185 NM_024595 79647 Hs.293563 NM_024595 HPRD:07787 AKIRIN1 C1orf108|STRF2 akirin 1 protein-coding 0.068889 0.687361 -94(AGCGGCCT,-,0.00) 86(GGGCCTTCCCGG,+,0.00) 28(GCGCGACAGCCC,+,0.00) 158(CGGGCCGGGC,-,0.00) 69(GGCGGGGG,+,0.00),218(GCCGGGCG,+,0.00) 192(CACCCTCTTCCG,-,0.00) 114(CGCTCTCCGCCC,+,0.00) 95(CGGTGTTG,-,0.00) -12(CCCGCGCA,+,0.00) 254(GCGGGGCCAGCG,+,0.00) -61(ACCCCCATGGCC,+,0.00),-59(CCCCATGGCCCC,-,0.00) 561_WT_peak_614 chr1 169663488 169663722 + 163 NA intron (NM_000655, intron 8 of 8) intron (NM_000655, intron 8 of 8) 14392 NR_029467 6402 Hs.728756 NM_000655 ENSG00000188404 SELL CD62L|LAM1|LECAM1|LEU8|LNHR|LSEL|LYAM1|PLNHR|TQ1 selectin L protein-coding 0.008547 0.421277 561_WT_peak_5176 chr3 101237424 101237726 + 163 NA promoter-TSS (NR_036433) promoter-TSS (NR_036433) -136 NR_036433 131909 Hs.518125 NR_036433 ENSG00000175841 FAM172BP FAM172B family with sequence similarity 172, member B pseudogene pseudo 0.009934 0.481848 -71(CTTGTCGG,+,0.00) 561_WT_peak_2150 chr14 24711685 24712248 + 163 NA promoter-TSS (NM_012461) promoter-TSS (NM_012461) -86 NM_012461 26277 Hs.496191 NM_012461 HPRD:16056 TINF2 DKCA3|TIN2 TERF1 (TRF1)-interacting nuclear factor 2 protein-coding 0.076377 0.620567 342(CGAGCCGGCGTC,+,0.00) 141(GGCGGCTGAG,+,0.00) 140(TGGCGGCT,+,0.00) 348(GGCGTCTA,-,0.00) 377(CGTCGCTT,+,0.00) -158(CCATCGGCCCCC,-,0.00),31(GGGAGCCAATGG,+,0.00) 40(TGGGCGGC,-,0.00) 214(GCGGAGCCTGCG,+,0.00) 210(CTTCGCGG,+,0.00) 561_WT_peak_4733 chr20 62917007 62917562 + 163 NA Intergenic TAR1|Satellite|telo -4454 NR_040415 140849 Hs.745565 NR_040415 LINC00266-1 C20orf69|NCRNA00266|NCRNA00266-1|bA476I15.3 long intergenic non-protein coding RNA 266-1 ncRNA 0.036036 0.654676 153(AGCCGCCA,-,0.00) -95(GGCGTACG,+,0.00) 273(GCGTGCCG,+,0.00) 279(CGCCGCTA,+,0.00) -92(GTACGACG,-,0.00) 561_WT_peak_6166 chr6 26285367 26286293 + 163 NA promoter-TSS (NM_003543) promoter-TSS (NM_003543) -103 NM_003543 8365 Hs.591790 NM_003543 HPRD:11919 HIST1H4H H4/h|H4FH histone cluster 1, H4h protein-coding 0.053996 0.507012 634(CGGACCGAAACC,+,0.00) 405(AGGCGTCT,+,0.00) 388(GAGCGCCGGCTC,+,0.00) 634(CGGACCGA,+,0.00) 342(GCCCAGCCCT,+,0.00) -11(CGTCACGA,-,0.00) -47(CGGTCTTG,-,0.00),128(CAAAACCT,+,0.00),553(CAAGACCG,+,0.00) 293(AGCGCGCA,+,0.00) 391(CGCCGGCTCCGC,-,0.00) 392(GCCGGCTCCGCG,-,0.00) 72(CCGCGACG,-,0.00) 561_WT_peak_4302 chr2 133011976 133012491 + 163 NA intron (NR_027020, intron 1 of 4) SSU-rRNA_Hsa|rRNA|rRNA 2420 NR_031608 100313824 NR_031608 miRBase:MI0006336 MIR663B MIRN663B microRNA 663b ncRNA 0.034951 0.523256 169(AGGTGGCT,+,0.00) 212(CCGACCGC,+,0.00) -44(AGGGCAGGGA,-,0.00) -65(TAGCGACT,-,0.00) 561_WT_peak_5019 chr3 15106532 15106955 + 163 NA promoter-TSS (NM_022497) promoter-TSS (NM_022497) 73 NM_022497 64432 Hs.657764 NM_022497 HPRD:17594 MRPS25 MRP-S25|RPMS25 mitochondrial ribosomal protein S25 protein-coding 0.111111 0.674528 -119(TCGCCCAGCTCC,+,0.00) -150(GGCGGCCGGG,+,0.00) 140(AGACGCTT,-,0.00) 93(CGGCTTCTCCCC,-,0.00) 50(CAGCGACG,-,0.00) 122(CCCGCGCA,+,0.00),205(GGCGCGGC,-,0.00) -15(GAAGCGGCCC,-,0.00) 0(GGGCATGGCGGC,-,0.00) 144(GCTTCCCGGC,-,0.00),165(GCCGCGGAGC,+,0.00) 561_WT_peak_7115 chr8 116439812 116440053 + 163 NA intron (NM_001282902, intron 4 of 5) intron (NM_001282902, intron 4 of 5) 240307 NM_001282902 7227 Hs.657018 NM_014112 HPRD:05091 TRPS1 GC79|LGCR trichorhinophalangeal syndrome I protein-coding 0.012448 0.404959 32(CTGTTTTG,-,0.00) 561_WT_peak_240 chr1 53098618 53098948 + 162 NA promoter-TSS (NM_001042693) promoter-TSS (NM_001042693) -283 NM_001042693 348378 Hs.424589 NM_182621 HPRD:14678 FAM159A PRO7171|WWLS2783 family with sequence similarity 159, member A protein-coding 0.130303 0.770393 154(CCGCCCGCCCCG,+,0.00) -52(GGCCTCGA,-,0.00) -119(CTGCCCCAGCCC,+,0.00) 95(CGCGTCCG,+,0.00) 79(TCCCGGCCCA,+,0.00) 148(CCCCCGCC,-,0.00) -18(TCGTGCTG,+,0.00),10(TCGTGCAG,+,0.00),110(TCCTGCCG,+,0.00) -161(CACTGACCCCGC,-,0.00),142(CGCCGGCCCCCG,-,0.00),155(CGCCCGCCCCGC,-,0.00) 73(CGCGGCTCCCGG,-,0.00) -23(CCGCGTCG,-,0.00) -60(CGCGCCCTGGCC,+,0.00) 561_WT_peak_2676 chr16 3507599 3508113 + 162 NA promoter-TSS (NM_001083600) promoter-TSS (NM_001083600) -136 NM_024845 79903 Hs.513296 NM_024845 HPRD:07852 NAA60 HAT4|NAT15 N(alpha)-acetyltransferase 60, NatF catalytic subunit protein-coding 0.108949 0.745631 -20(CGGCCCGGAAAC,+,0.00),227(GCTTCCGGGCTG,-,0.00) 55(GCGACCTCCCGG,+,0.00),283(CCTCCGTCCCGG,+,0.00) 179(CAGCGCCGGCCT,+,0.00) 106(CGCATACG,+,0.00) -32(GCCGCGGG,+,0.00),269(GCCGCGGG,+,0.00) 78(GGGAAGGAGCCG,+,0.00) 250(GGGAGCGGGAGG,+,0.00) -10(ACCGCGCC,+,0.00) -24(ACCTCGGCCC,-,0.00) 168(CAACATGGCGGC,-,0.00) 286(CCGTCCCGGCTG,+,0.00) 561_WT_peak_4266 chr2 113341724 113342102 + 162 NA promoter-TSS (NM_032309) promoter-TSS (NM_032309) -123 NM_032309 84269 Hs.375707 NM_032309 HPRD:13046 CHCHD5 C2orf9|MIC14 coiled-coil-helix-coiled-coil-helix domain containing 5 protein-coding 0.068783 0.583113 160(CGGGCCGGAAGA,+,0.00) 128(AAGTGGCT,+,0.00) 165(CGGAAGAAGAGG,+,0.00) -8(GCCGCGCA,+,0.00) 74(GCTGCCATGGCA,+,0.00),145(GCCGCCATGACG,+,0.00) 156(GAGCCGGGCCGG,-,0.00) 561_WT_peak_2701 chr16 12897247 12897691 + 162 NA intron (NM_001099455, intron 1 of 2) CpG 275 NM_001099455 55313 Hs.460002 NM_018340 CPPED1 CSTP1 calcineurin-like phosphoesterase domain containing 1 protein-coding 0.060811 0.626966 21(TGGCGGCT,+,0.00) 123(TCCCCTCCCCGG,+,0.00) 138(AGGGGCGGGC,-,0.00) 93(CCCCCGGC,-,0.00),201(CCCCCGCC,-,0.00) 57(GTCCGACT,-,0.00) 29(CCCAGGCCCCGG,-,0.00) 161(AACGCGGCCA,-,0.00) -70(GGCCAAGGAGGC,-,0.00),16(AGCTATGGCGGC,-,0.00),215(GCCGACATGGCG,+,0.00) 106(GTTCCGCAGC,-,0.00) 27(CTCCCAGGCCCC,-,0.00) 561_WT_peak_1293 chr11 58345878 58346353 + 161 NA promoter-TSS (NM_053023) promoter-TSS (NM_053023) -472 NR_024091 386607 Hs.524920 NM_170768 ENSG00000255073 ZFP91-CNTF - ZFP91-CNTF readthrough (NMD candidate) ncRNA 0.073684 0.592437 212(TCACCCGCCTCC,+,0.00) -71(AGAGACTT,-,0.00) -95(CCGTTTTG,-,0.00) 188(CGGGGAAA,+,0.00) 4(TCCGCGCA,+,0.00) 561_WT_peak_6837 chr7 128171453 128171782 + 161 NA Intergenic CpG 54834 NM_018396 55798 Hs.433213 NM_018396 HPRD:09705 METTL2B METL|METTL2|METTL2A|PSENIP1 methyltransferase like 2B protein-coding 0.118541 0.806061 52(CCCCCCTCCCCC,+,0.00) 90(AGGCGGCT,+,0.00) 53(CCCCCTCCCCCG,+,0.00),103(CCGGGCGGGGGG,-,0.00) 18(TGTACGCG,-,0.00) -133(CCGACCCA,+,0.00) -125(CCCCGGCCCT,+,0.00) 59(CCCCCGCC,-,0.00),106(GGCGGGGG,+,0.00) 46(TCGTGCCC,+,0.00) 1(CGTCGGGC,+,0.00) 134(CCCCGGCTCCGC,-,0.00) 135(CCCGGCTCCGCC,-,0.00) 138(GGCTCCGCCC,-,0.00) -2(CCGCGTCG,-,0.00) 561_WT_peak_6138 chr6 26031670 26032420 + 161 NA exon (NM_003537, exon 1 of 1) exon (NM_003537, exon 1 of 1) 243 NM_003537 8358 Hs.533292 NM_003537 HPRD:11913 HIST1H3B H3/l|H3FL histone cluster 1, H3b protein-coding 0.060000 0.508655 276(TCGGTCGA,-,0.00) 291(TAGCGGCG,-,0.00) -136(CCAAACCG,+,0.00),211(CGGTCTTG,-,0.00),457(CAAAACCA,+,0.00) 561_WT_peak_5401 chr4 4249701 4250322 + 161 NA promoter-TSS (NM_001297552) promoter-TSS (NM_001297552) -42 NM_001297552 85013 Hs.12845 NM_032927 HPRD:17483 TMEM128 - transmembrane protein 128 protein-coding 0.091787 0.628617 -31(CGGCCCGGCGTC,+,0.00),40(GCTGCCGGGCCC,-,0.00) -81(CCGACGCC,+,0.00),26(TCGCCGCC,+,0.00) 295(CCGACCTA,+,0.00) 349(AGGGCCGGGA,-,0.00) 11(CGGCAGGA,-,0.00) 444(CACTCTCAGCCC,+,0.00) -83(TTCCGACG,-,0.00),97(CGTCAGAC,+,0.00) -139(CAAAGCCG,+,0.00) 43(GCCGGGCCCGCG,+,0.00) -110(GGCCAGGGCTGC,-,0.00) 561_WT_peak_7470 chr9 135645449 135645725 + 161 NA intron (NM_152572, intron 11 of 12) CpG -99799 NM_022779 64794 Hs.660767 NM_022779 HPRD:10860 DDX31 PPP1R25 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 protein-coding 0.068841 0.667870 46(GGGCCCGGAGGC,+,0.00) 36(CCGCCAGCCCGG,+,0.00) 34(CCCCGCCAGCCC,+,0.00),53(GAGGCCCAGCCC,+,0.00) -38(TCGTGCCC,+,0.00) -149(CAGGTAAA,+,0.00) 36(CCGCCAGCCCGG,-,0.00) 561_WT_peak_3428 chr18 9102715 9103052 + 161 NA intron (NM_021074, intron 1 of 7) CpG 255 NM_021074 4729 Hs.464572 NM_021074 HPRD:02757 NDUFV2 CI-24k NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa protein-coding 0.065282 0.653846 63(AGGCCGCT,+,0.00) -95(ACCGCCCA,+,0.00) -58(CGCTGCCGCCGC,-,0.00) -114(GGCCCGGGCGGC,-,0.00) 561_WT_peak_2161 chr14 31676344 31676988 + 161 NA promoter-TSS (NM_015382) promoter-TSS (NM_015382) 63 NM_015382 25831 Hs.708017 NM_015382 HPRD:17098 HECTD1 EULIR HECT domain containing E3 ubiquitin protein ligase 1 protein-coding 0.119565 0.741085 238(TCCCCTTCCTCC,+,0.00) -111(GCAACCGGGCCC,-,0.00) 470(GGCAGCCGAG,+,0.00) -59(CGGGGAAGTCGG,-,0.00),201(CCGGGCAGGCGG,-,0.00),415(CCGGGAGGGGGA,-,0.00) -26(TCGGCGCC,+,0.00) 284(CGCGTGCG,+,0.00) 234(TCCCTCCCCT,+,0.00) 4(GCCGGGCG,+,0.00) 239(CCCCTTCCTCCG,-,0.00) 41(TTCCGACG,-,0.00),49(GTCCGAGG,-,0.00) 103(CCAAACCG,+,0.00) 186(GCCGCGCA,+,0.00),223(GCCGCGCC,+,0.00),384(GGCGCGGC,-,0.00) -108(ACCGGGCCCCGC,-,0.00),181(CGCAGGCCGCGC,-,0.00),376(GCGGCGGCGGCG,+,0.00) 323(CGCGGCTCCTCA,-,0.00),357(CGCGGTGCTGCG,+,0.00) -95(GCCGGCAGGGCC,+,0.00),369(GGCGACGGCGGC,-,0.00) -103(GCCCCGCCGC,-,0.00),379(GCGGCGGCGC,+,0.00),453(GCGGGGAAGC,+,0.00) -45(GCAGCCTGGCCG,+,0.00),-44(CAGCCTGGCCGA,-,0.00),142(GAGCCAGGCCCG,-,0.00) 561_WT_peak_6314 chr6 38670601 38670918 + 161 NA exon (NM_006708, exon 1 of 6) exon (NM_006708, exon 1 of 6) 193 NM_006708 2739 Hs.268849 NM_006708 HPRD:00730 GLO1 GLOD1|GLYI|HEL-S-74 glyoxalase I protein-coding 0.097792 0.682390 -129(CCGCCCGA,+,0.00) -68(TCCCGGCCCA,+,0.00) -118(CGGCGGAC,+,0.00),-1(CGTCGGAG,+,0.00),38(CGCCGGAC,+,0.00) 54(CGGTTCTG,-,0.00) -80(AATGCGGCCC,-,0.00) -4(CCGCGTCG,-,0.00) 60(TGCCATGGCTGC,-,0.00) 561_WT_peak_7 chr1 1051424 1051759 + 161 NA 5' UTR (NM_017891, exon 1 of 10) 5' UTR (NM_017891, exon 1 of 10) 145 NM_017891 54991 Hs.235095 NM_017891 HPRD:07930 C1orf159 - chromosome 1 open reading frame 159 protein-coding 0.122388 0.711310 -144(GCGCCCTCCGGG,+,0.00) -54(CGGCGCCAGGCC,+,0.00) -97(GCCGCGCC,+,0.00) -104(CGGTGGCGCCGC,-,0.00),-63(CCCCGGCCCCGG,-,0.00),-50(GCCAGGCCCCGC,-,0.00) 1(AGAGCCGCCC,-,0.00) -53(GGCGCCAGGCCC,+,0.00),4(GCCGCCCTCGCC,+,0.00) -45(GCCCCGCAGC,-,0.00) -52(GCGCCAGGCCCC,-,0.00) 561_WT_peak_2391 chr14 105995546 105996018 + 161 NA exon (NM_025268, exon 2 of 2) exon (NM_025268, exon 2 of 2) 2829 NM_025268 80757 Hs.157527 NM_025268 HPRD:14652 TMEM121 hole transmembrane protein 121 protein-coding 0.103814 0.682875 -100(CGCGGCCGCC,-,0.00) -28(CCGCGCTCCGGG,+,0.00) -85(TGGGTGGCGCTG,-,0.00),-19(GGGCTGCCGCTG,-,0.00),149(GTGCTGGCGCGC,-,0.00),221(GTGGTGGCGCTC,-,0.00) -156(TCGTGGCG,+,0.00) 87(TAGCGCCG,-,0.00) -91(CTGTTTTG,-,0.00),214(CAAAAACG,+,0.00) 108(TGTACCCG,-,0.00) -102(TGCGCGGC,-,0.00) 561_WT_peak_6272 chr6 31239330 31239873 + 161 NA exon (NM_002117, exon 2 of 8).2 exon (NM_002117, exon 2 of 8).2 312 NM_001243042 3107 Hs.77961 NM_002117 HPRD:00829 HLA-C D6S204|HLA-JY3|HLC-C|PSORS1 major histocompatibility complex, class I, C protein-coding 0.101289 0.711397 252(AGGCCGCT,+,0.00) 197(GCGGCTCCCCGG,+,0.00),223(CCGGGAGGGCCC,-,0.00) 33(GGCGTCGC,-,0.00),123(GGTGTCGA,-,0.00) -72(TCGGTCAG,-,0.00),176(CCGCCCGA,+,0.00),180(CCGACCCA,+,0.00),293(TCGGTCAG,-,0.00) 107(CGGGCCGGGA,-,0.00) 8(CCCGCGGC,-,0.00) 48(CCGCACGA,-,0.00) 35(CGTCGCTG,+,0.00) 261(CCCTCCCAACCC,+,0.00) 8(CCCGCGGCTCCC,-,0.00) -96(GCCGCGCA,+,0.00),194(TGCGCGGC,-,0.00) 10(CGCGGCTCCCCT,-,0.00),196(CGCGGCTCCCCG,-,0.00) 172(AGACCCGCCC,-,0.00) 338(GGCGCCATGACC,+,0.00) 31(GCGGCGTCGCTG,+,0.00),102(GCGGCCGGGCCG,+,0.00),103(CGGCCGGGCCGG,-,0.00) 561_WT_peak_7216 chr9 19048949 19049684 + 161 NA promoter-TSS (NM_006570) promoter-TSS (NM_006570) 36 NM_001287049 158297 Hs.731593 NM_153707 HPRD:16676 FAM154A C9orf138 family with sequence similarity 154, member A protein-coding 0.092517 0.660326 -17(GAAACCGGCCCG,-,0.00) 198(AGCGGCTT,-,0.00) 291(GCTCCCTCCCGG,+,0.00) 255(TCGCCGCC,+,0.00) 362(AAGAGCCAGCCC,+,0.00) 373(CGTCCGCG,-,0.00) -116(GCCCTGCCCT,+,0.00) 71(CCCCCGGC,-,0.00),339(GCCGCGGG,+,0.00) -12(CGGCCCGA,-,0.00) 215(CGTCGGGC,+,0.00) 429(TGCGCGGC,-,0.00),449(GGCGCGGC,-,0.00),505(GCCGCGCC,+,0.00) 230(GCGGAGCGAGGG,+,0.00),450(GCGCGGCCTGCG,+,0.00) 526(CGCGGTGCCCCG,+,0.00) -16(AAACCGGCCC,-,0.00) 427(GCTGCGCGGC,+,0.00),432(GCGGCGGAGC,+,0.00) 561_WT_peak_6216 chr6 27777805 27778303 + 161 NA exon (NM_003536, exon 1 of 1) exon (NM_003536, exon 1 of 1) 212 NM_003536 8357 Hs.591778 NM_003536 HPRD:11912 HIST1H3H H3/k|H3F1K|H3FK histone cluster 1, H3h protein-coding 0.082329 0.605210 -164(AGCGGCTA,-,0.00),-47(AGGCGGCT,+,0.00) 220(TCCACGCC,+,0.00) -113(CGCGTACG,+,0.00) 0(CATCGCTA,+,0.00),39(CGCCGCTA,+,0.00) 119(CAAGACCG,+,0.00) -156(GCTTTCTCTTTC,-,0.00) -70(TCCGCGCA,+,0.00) -76(CAAGGCTCCGCG,-,0.00) -121(AGGCATGGCGCG,-,0.00),-52(CACCAAGGCGGC,-,0.00) 561_WT_peak_3938 chr19 59030728 59031354 + 161 NA promoter-TSS (NM_032792) promoter-TSS (NM_032792) -120 NM_032792 84878 Hs.515662 NM_032792 HPRD:15808 ZBTB45 ZNF499 zinc finger and BTB domain containing 45 protein-coding 0.110224 0.693780 168(CCAGCCTCCTCG,+,0.00) 283(ACTTCCGGGCCG,-,0.00),398(CACTCCGGCTCT,-,0.00) 176(CTCGCCCGCC,-,0.00) -77(CCAGCTTCCCGG,+,0.00) -143(CCGACGCC,+,0.00),207(TCGACCCC,+,0.00) 263(CTGACCGA,+,0.00) 80(CCCCCGCC,-,0.00) 253(CCGCTTCCTCCT,-,0.00) 451(CGTCGCGA,+,0.00) -65(GTCCGGCG,-,0.00) -34(GCCGCGCC,+,0.00) -47(CCGCCACG,-,0.00),448(CCGCGTCG,-,0.00) -39(CCTTCGCCGC,-,0.00),324(GCGGCGGCGC,+,0.00) 561_WT_peak_1973 chr13 29233203 29233582 + 160 NA intron (NM_015932, intron 1 of 5) CpG 251 NM_015932 51371 Hs.268742 NM_015932 HPRD:12613 POMP C13orf12|PNAS-110|UMP1 proteasome maturation protein protein-coding 0.105541 0.684211 -97(GGGGTCGA,-,0.00) -130(GGGGGCCAGCCC,+,0.00) 145(CGGCACTA,-,0.00) -51(CGGAAGATGGTG,+,0.00) -77(GGGCAGAGAGGC,-,0.00) 15(GAAACAGGCAGT,+,0.00) 50(GCGGCGGCGGCG,+,0.00),56(GCGGCGGCAGCG,+,0.00) -61(CGCAGAGCTGCG,+,0.00) 561_WT_peak_5871 chr5 108745934 108746404 + 160 NA promoter-TSS (NM_014819) promoter-TSS (NM_014819) -494 NM_014819 9867 Hs.483036 NM_014819 HPRD:11436 PJA2 Neurodap1|RNF131 praja ring finger 2, E3 ubiquitin protein ligase protein-coding 0.048936 0.524416 -122(CCCCCGCC,-,0.00) -17(GGGCTGAGAGAA,-,0.00),267(CCCTCTCCGCGC,+,0.00) 223(TTTACCCA,-,0.00) -143(GAAAGACGAAGC,+,0.00) -37(TGCGCGGC,-,0.00) -3(GGGCGGGGTC,+,0.00) 561_WT_peak_2476 chr15 50646090 50647348 + 160 NA non-coding (NR_024490, exon 1 of 1) non-coding (NR_024490, exon 1 of 1) 348 NR_024490 100129387 Hs.659360 NR_024490 GABPB1-AS1 - GABPB1 antisense RNA 1 ncRNA 0.087440 0.637014 781(AGCCCCGGAAAC,+,0.00) 450(GGCTGCCGAG,+,0.00),626(GGCGGCCGCG,+,0.00) 577(TCGCCACCCCGG,+,0.00),604(CCGGCAAGCCGG,-,0.00) 194(GGCGGCGA,-,0.00),407(TCGCCGCC,+,0.00),1079(TCGGCGCC,+,0.00) 588(GGGCTGCCGCTC,-,0.00) 993(CGTACCCG,-,0.00) 338(CCGGCCGA,+,0.00) 679(GCCCGCCCCT,+,0.00) 266(CCCGCGGC,-,0.00) 564(CGGCGCGA,-,0.00) 364(GCCTCTCGGCCC,+,0.00),404(CCCTCGCCGCCC,+,0.00) 862(TTTACCAG,-,0.00) 505(CCTTCCTCTTTC,-,0.00) 495(GCCGCGCC,+,0.00) 288(CGGGGGCCCCGC,-,0.00),472(GCGGCGCCAGAG,+,0.00),725(GCGGCGCGGGCG,+,0.00),741(GGCCGACCCCGC,-,0.00),770(GCGGGGCCAGGA,+,0.00) 613(CGGGTAGCCGCG,+,0.00),1011(CGCGGCCCCGCT,-,0.00) 1009(GACGCGGCCC,-,0.00) 623(CGAGGCGG,+,0.00) 284(GCTGCGGGGG,+,0.00),372(GCCCCGCAGC,-,0.00),619(GCCGCGAGGC,+,0.00),722(GCGGCGGCGC,+,0.00) 998(CCGGCCGGGCTG,+,0.00) 561_WT_peak_7560 chrX 57618397 57618868 + 160 NA exon (NM_007157, exon 1 of 1) exon (NM_007157, exon 1 of 1) 363 NM_007157 158586 Hs.156257 NM_007157 HPRD:11777 ZXDB ZNF905|dJ83L6.1 zinc finger, X-linked, duplicated B protein-coding 0.125265 0.752119 274(GGAGGAGGCCGA,-,0.00) -7(GGCGGCCGAG,+,0.00),277(GGAGGCCGAG,+,0.00) -124(CCTCCTCCTCGG,+,0.00) 142(GGCGCCGA,-,0.00),182(GGCGGCGA,-,0.00),185(GGCGACGA,-,0.00) -148(CCCGCGGC,-,0.00) 92(CGGCGCGA,-,0.00) 163(TAGCGGCG,-,0.00),223(TGGCGACG,-,0.00) 210(TTGACCCG,-,0.00) -36(GCGGCGGCGGCG,+,0.00),-33(GCGGCGGCGGCG,+,0.00),165(GCGGCGGCGGCG,+,0.00),168(GCGGCGGCGGCG,+,0.00),171(GCGGCGGCGGCG,+,0.00),174(GCGGCGGCGGCG,+,0.00),177(GCGGCGGCGGCG,+,0.00),238(CGCGGGCTCCGG,-,0.00) 81(GGCCCGGGCGGC,-,0.00),120(GGGGCCCTGGCC,+,0.00) 88(GCGGCGGCGC,+,0.00) 247(CGGTCAGGCCGC,-,0.00) 561_WT_peak_1622 chr12 15114566 15115043 + 160 NA promoter-TSS (NM_001175) promoter-TSS (NM_001175) -242 NM_001175 397 Hs.504877 NM_001175 HPRD:04162 ARHGDIB D4|GDIA2|GDID4|LYGDI|Ly-GDI|RAP1GN1|RhoGDI2 Rho GDP dissociation inhibitor (GDI) beta protein-coding 0.016771 0.420502 561_WT_peak_1767 chr12 72057820 72058327 + 159 NA promoter-TSS (NM_144982) promoter-TSS (NM_144982) -324 NM_144982 196441 Hs.245798 NM_144982 HPRD:14489 ZFC3H1 CCDC131|PSRC2 zinc finger, C3H1-type containing protein-coding 0.047337 0.539370 309(CCGACCAA,+,0.00) 163(CCCCTTCTTCCC,-,0.00) 137(CCTTCGCCTCCG,-,0.00) 95(CTAGTCGG,+,0.00) 248(GCTTAGCAGC,-,0.00) 561_WT_peak_1442 chr11 85534867 85535265 + 159 NA Intergenic Intergenic -12864 NM_001289608 54843 Hs.369520 NM_032379 HPRD:10260 SYTL2 CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A synaptotagmin-like 2 protein-coding 0.005025 0.433584 -66(AGCCACCT,-,0.00) 561_WT_peak_1652 chr12 38710401 38710756 + 159 NA promoter-TSS (NM_001013620) promoter-TSS (NM_001013620) 21 NM_001013620 144245 Hs.259305 NM_001013620 ALG10B ALG10|KCR1 ALG10B, alpha-1,2-glucosyltransferase protein-coding 0.076056 0.578652 157(CTCGGCCGCC,-,0.00) 146(GGTTACTGTTTC,-,0.00) -146(AGACCCGCCC,-,0.00) 561_WT_peak_116 chr1 25969220 25969539 + 159 NA intron (NM_001289010, intron 1 of 11) intron (NM_001289010, intron 1 of 11) 25420 NM_020379 57134 Hs.197043 NM_020379 MAN1C1 HMIC|MAN1A3|MAN1C|pp6318 mannosidase, alpha, class 1C, member 1 protein-coding 0.018809 0.459375 -80(AGGCCGCT,+,0.00) 144(TGCGCAGC,-,0.00) 561_WT_peak_6653 chr7 43965786 43966336 + 159 NA promoter-TSS (NM_001077664) promoter-TSS (NM_001077664) 26 NM_015983 51619 Hs.19196 NM_015983 HPRD:14242 UBE2D4 HBUCE1 ubiquitin-conjugating enzyme E2D 4 (putative) protein-coding 0.110909 0.700544 13(CTCGGCCGCG,-,0.00),109(GGCGGCTGAG,+,0.00) 108(TGGCGGCT,+,0.00),191(AAGCGGAT,+,0.00) 158(CCGGGTCCCCGG,+,0.00),323(CTGGGAAGGAGG,-,0.00) -47(TCGAAGCC,+,0.00),41(GGCGACGA,-,0.00),245(AGCGTCGA,-,0.00) 33(CGGCACGC,-,0.00) 1(CCGCTGCTTCCC,-,0.00) 239(GTCCGAAG,-,0.00) 82(GCTGCGGCTCCC,-,0.00) -158(GGAACAGGGAGC,+,0.00) 17(GCCGCGCC,+,0.00),346(CCCGCGCA,+,0.00) 293(GGAGGCTCCGCG,-,0.00) -2(GCCCCGCTGC,-,0.00) -67(GGGGCCTTGCTG,+,0.00),146(CGGCCGGGCCGC,-,0.00) 561_WT_peak_6987 chr8 38644814 38645320 + 159 NA 5' UTR (NM_006283, exon 1 of 13) 5' UTR (NM_006283, exon 1 of 13) 345 NM_006283 6867 Hs.279245 NM_006283 HPRD:10391 TACC1 Ga55 transforming, acidic coiled-coil containing protein 1 protein-coding 0.104743 0.690335 -85(GGAGGAGGCCGA,-,0.00) -82(GGAGGCCGAG,+,0.00) 16(AAACGCTT,-,0.00) -141(GCGTCTTCCCGG,+,0.00),238(CCGAGGAGGAGG,-,0.00) 185(GGTACGCG,-,0.00) 101(TGGAGCCGGAGG,+,0.00) -115(CGCGGGGCCCGC,-,0.00),-114(GCGGGGCCCGCT,+,0.00),193(GCGGGGCCGCCG,+,0.00) 108(GGAGGAGCCGCG,+,0.00) 190(GCGGCGGGGC,+,0.00) 561_WT_peak_1767-2 chr12 72057562 72057678 + 159 NA promoter-TSS (NM_031435) promoter-TSS (NM_031435) -57 NM_031435 83591 Hs.245798 NM_031435 HPRD:10896 THAP2 - THAP domain containing, apoptosis associated protein 2 protein-coding 0.112069 0.641026 -71(TAGCGGCT,+,0.00) -154(CGTCGCAA,+,0.00) -162(CGCCGGAC,+,0.00) -64(TGTACCCG,-,0.00) -96(CCGCCTCG,-,0.00) -119(GCTCCTCAGC,-,0.00) 561_WT_peak_5127 chr3 53381289 53381978 + 159 NA promoter-TSS (NM_001290205) promoter-TSS (NM_001290205) 21 NM_001290204 55802 Hs.476353 NM_018403 HPRD:06113 DCP1A HSA275986|Nbla00360|SMAD4IP1|SMIF decapping mRNA 1A protein-coding 0.082729 0.659420 -10(AGCGACCT,-,0.00) 337(AGGCTGGAGCTC,-,0.00) 247(CGCGCACG,+,0.00) 239(GTCCGCCG,-,0.00) 303(TGGGCGGT,-,0.00) 201(CGCGGGCCTCGC,-,0.00) 124(GGCGGAGTCGCG,+,0.00) 123(GGGCGGAGTC,+,0.00) 198(CTACGCGG,+,0.00) -150(ACCGCCCTGGCC,+,0.00) 206(GCCTCGCGGC,-,0.00) 561_WT_peak_3073 chr17 19880622 19881294 + 159 NA exon (NM_007202, exon 1 of 15) exon (NM_007202, exon 1 of 15) 211 NM_007202 11216 Hs.642676 NM_007202 HPRD:05259 AKAP10 AKAP-10|D-AKAP-2|D-AKAP2|PRKA10 A kinase (PRKA) anchor protein 10 protein-coding 0.090774 0.690936 223(ACTTCCGGGTCC,-,0.00) 319(AGCCGCCA,-,0.00) 290(CCGCCTCCTCGG,+,0.00),340(CCGCCCGCCCGG,+,0.00),484(CCTCTTTCCCGG,+,0.00) 312(CAGCTCCAGCCG,+,0.00),391(AAGCGCCGGCCC,+,0.00) 45(CCCTCGCAGGCC,+,0.00) 98(CGCCGGCGCCCC,-,0.00),142(GCGGGGCCCGGG,+,0.00),394(CGCCGGCCCCGC,-,0.00) 29(GCCGCCTTGGGG,+,0.00),135(GGACATGGCGGG,-,0.00) 561_WT_peak_1942 chr13 20993722 20994196 + 159 NA intron (NM_015974, intron 5 of 7) intron (NM_015974, intron 5 of 7) 14026 NR_039721 100616304 NR_039721 MIR4499 - microRNA 4499 ncRNA 0.014768 0.461053 -139(TAGCGATG,-,0.00) 119(GCAACAGGAAAC,+,0.00) 561_WT_peak_1265 chr11 44883763 44883967 + 159 NA intron (NM_130783, intron 2 of 8) intron (NM_130783, intron 2 of 8) 87894 NM_001258320 9537 Hs.554791 NM_006034 HPRD:15545 TP53I11 PIG11 tumor protein p53 inducible protein 11 protein-coding 0.029412 0.565854 -8(TGGTTTTG,-,0.00) -157(GCCTGGCAGC,-,0.00) -159(CAGCCTGGCAGC,-,0.00) 561_WT_peak_810 chr1 235667779 235668045 + 159 NA promoter-TSS (NM_152490) promoter-TSS (NM_152490) -131 NM_152490 148789 Hs.498143 NM_152490 HPRD:16533 B3GALNT2 B3GalNAc-T2|MDDGA11 beta-1,3-N-acetylgalactosaminyltransferase 2 protein-coding 0.101504 0.707865 14(CTCGGCGGCC,-,0.00),17(GGCGGCCGCG,+,0.00) -123(GCCCCGCCCT,+,0.00) 21(GCCGCGGG,+,0.00) -116(CCTCTCCTCCCG,-,0.00) -117(CCCTCTCCTCCC,+,0.00) -34(CGGTTTAG,-,0.00) -76(GGGAGCTGAAGT,+,0.00) -128(CACTCGCCCCGC,-,0.00) -149(GGCTCCGCCC,-,0.00) 27(GGGGCGAAGC,+,0.00) -89(CAGCCAGCCGGC,-,0.00) 561_WT_peak_576 chr1 160313001 160313406 + 159 NA exon (NM_015331, exon 1 of 17) exon (NM_015331, exon 1 of 17) 140 NM_001290184 23385 Hs.517249 NM_015331 HPRD:05584 NCSTN ATAG1874 nicastrin protein-coding 0.076543 0.637931 -72(GGCTCCGGGCCA,-,0.00) -32(AGGCCGCT,+,0.00) 55(CCGGGAAGTCGG,-,0.00) -149(CTTCGGAC,+,0.00) -17(AGGAGCCGAACG,+,0.00) 153(GGATCGGCCC,-,0.00) 159(GCCCCGCCGC,-,0.00) 561_WT_peak_5620 chr4 152681934 152682440 + 159 NA promoter-TSS (NM_004564) promoter-TSS (NM_004564) -12 NM_004564 5188 Hs.119316 NM_004564 HPRD:04706 GATB PET112|PET112L glutamyl-tRNA(Gln) amidotransferase, subunit B protein-coding 0.053360 0.579882 135(CGGACCGGAAGA,+,0.00) 173(TCGAAGCC,+,0.00) 8(CAGCCCCAGCGC,+,0.00) 199(AGGGGAGGGA,-,0.00) -108(GCTGCTGAGC,+,0.00),78(GCCGCGAGGC,+,0.00) 561_WT_peak_2976 chr17 2169289 2169655 + 159 NA promoter-TSS (NM_001256827) promoter-TSS (NM_001256827) 21 NM_001256827 23293 Hs.448342 NM_017575 HPRD:06502 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding 0.024590 0.449591 112(CGCACGCG,-,0.00) -123(TTTACCAG,-,0.00) 561_WT_peak_6875 chr7 141437788 141438493 + 159 NA promoter-TSS (NM_001256513) promoter-TSS (NM_001256513) 19 NR_046269 6742 Hs.490394 NM_003143 HPRD:02703 SSBP1 Mt-SSB|SOSS-B1|SSBP|mtSSB single-stranded DNA binding protein 1, mitochondrial protein-coding 0.055319 0.532578 113(AGCCGTTT,-,0.00),354(AGGTGTCT,+,0.00) 54(GGCGTTGA,-,0.00) 331(TGGGTCGG,-,0.00) 376(TCGTGCGG,+,0.00) -78(CTGTTTTG,-,0.00),414(CGGTTTTC,-,0.00) 171(GTTTCCTTTTTC,-,0.00) 70(CCCGCGCA,+,0.00) -52(GGGCCCAGTT,+,0.00) 48(CTTGGCGG,+,0.00) 561_WT_peak_7185 chr8 145002600 145002992 + 159 NA intron (NM_201383, intron 25 of 31) intron (NM_201383, intron 25 of 31) 10962 NM_201384 5339 Hs.434248 NM_000445 HPRD:03180 PLEC EBS1|EBSO|HD1|LGMD2Q|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding 0.025510 0.559796 -132(AGGAAGAGGCGG,+,0.00),20(AGGAAGAGGCGG,+,0.00) 561_WT_peak_2926 chr16 82687393 82687847 + 159 NA intron (NM_001220488, intron 2 of 14) intron (NM_001220488, intron 2 of 14) 27221 NM_001220488 1012 Hs.654386 NM_001257 HPRD:03219 CDH13 CDHH|P105 cadherin 13 protein-coding 0.015419 0.498901 91(GGCCTGAGAGAG,-,0.00) 561_WT_peak_5929 chr5 134209889 134210243 + 159 NA 5' UTR (NM_024715, exon 1 of 5) 5' UTR (NM_024715, exon 1 of 5) 606 NM_024715 79770 Hs.741304 NM_024715 HPRD:08658 TXNDC15 C5orf14|UNQ335 thioredoxin domain containing 15 protein-coding 0.115819 0.712676 -106(AGCGGCTA,-,0.00),101(ATGCGGCT,+,0.00) -24(CCGCGCTCCCAG,+,0.00) 82(TCGACGAC,+,0.00),158(GGCGTGGA,-,0.00) 151(CGTCCGCG,-,0.00) -90(CCGCCCGA,+,0.00) 178(GCCGGGGG,+,0.00) 18(CAGCACGA,-,0.00) -31(GCCGCGCC,+,0.00) -37(CGCGGGGCCGCG,+,0.00),-37(CGCGGGGCCGCG,-,0.00),28(CGCGTAGCCGTG,+,0.00),102(TGCGGCTCCTCG,-,0.00) -33(GGGCCGCGCC,+,0.00) 561_WT_peak_112 chr1 25348809 25349594 + 158 NA Intergenic Intergenic -57700 NM_001031680 864 Hs.170019 NM_004350 HPRD:02565 RUNX3 AML2|CBFA3|PEBP2aC runt-related transcription factor 3 protein-coding 0.025478 0.636132 430(CCTCCCTCCTCC,+,0.00) -27(GGCGGGGG,+,0.00) 31(GCCGCCCA,+,0.00) 12(CCGGCCTGCCTC,+,0.00) 561_WT_peak_3803 chr19 45981753 45982059 + 158 NA Intergenic tRNA-SeC(e)-TGA|tRNA|tRNA 10653 NM_006732 2354 Hs.590958 NM_006732 HPRD:01270 FOSB AP-1|G0S3|GOS3|GOSB FBJ murine osteosarcoma viral oncogene homolog B protein-coding 0.052288 0.521173 -155(AGCGACCT,-,0.00) -126(GCGCCTCCCGGG,+,0.00) -59(CCGCCCGA,+,0.00) -31(TGTCGCTA,+,0.00) 43(CCCGCGCA,+,0.00) 561_WT_peak_3191 chr17 41393172 41393515 + 158 NA Intergenic Intergenic -12281 NR_047479 100874261 Hs.546898 NR_047479 ENSG00000236383 LINC00854 TMEM106A-AS1 long intergenic non-protein coding RNA 854 ncRNA 0.032070 0.409884 100(CGGTTTTT,-,0.00) 561_WT_peak_2285 chr14 74417031 74417315 + 158 NA promoter-TSS (NM_152445) promoter-TSS (NM_152445) -56 NM_152445 145483 Hs.550547 NM_152445 HPRD:12649 FAM161B C14orf44|c14_5547 family with sequence similarity 161, member B protein-coding 0.084507 0.666667 34(GAAACCGGGCCG,-,0.00) 49(AGGCACGA,-,0.00) 109(TCGCGACG,-,0.00) -79(GTCCGGCG,-,0.00) 44(CGCGGAGGCACG,+,0.00) -110(ACAGCGGCCC,-,0.00) -163(CACCATGGCGGC,-,0.00),-18(GCTGCCATGGCC,+,0.00) -156(GCGGCCCGGCTT,+,0.00) 561_WT_peak_5939 chr5 137795091 137795311 + 158 NA Intergenic Intergenic -5980 NM_001964 1958 Hs.326035 NM_001964 HPRD:00549 EGR1 AT225|G0S30|KROX-24|NGFI-A|TIS8|ZIF-268|ZNF225 early growth response 1 protein-coding 0.036364 0.606335 -23(CTGGGGAGGAGG,-,0.00) -145(TCAGTCGG,-,0.00) -90(AGGCCCGGGC,-,0.00) 34(CCGGCTCAGCCC,+,0.00) 561_WT_peak_1990 chr13 34116976 34117507 + 158 NA intron (NM_001243476, intron 3 of 17) intron (NM_001243476, intron 3 of 17) 133731 NM_001243476 90627 Hs.156551 NM_052851 HPRD:11607 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR-related lipid transfer (START) domain containing 13 protein-coding 0.050847 0.513158 -80(CCCGCCCTGGAC,+,0.00) 561_WT_peak_5185-2 chr3 101569355 101569589 + 158 NA intron (NM_031419, intron 1 of 11) intron (NM_031419, intron 1 of 11) 1114 NM_031419 64332 Hs.319171 NM_031419 HPRD:09217 NFKBIZ IKBZ|INAP|MAIL nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta protein-coding 0.034188 0.408511 -40(AAAACAGGATGC,+,0.00) 561_WT_peak_5185 chr3 101568768 101569066 + 158 NA intron (NM_031419, intron 1 of 11) CpG 559 NM_031419 64332 Hs.319171 NM_031419 HPRD:09217 NFKBIZ IKBZ|INAP|MAIL nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta protein-coding 0.107383 0.702341 26(AACCGGCT,+,0.00) -30(CCGCCTTGCCCG,+,0.00) -146(CGTACTCG,-,0.00),-135(CGCGCACG,+,0.00),-61(CGTACGCA,-,0.00) -20(CGGGCCGGGC,-,0.00) -17(GCCGGGCG,+,0.00),87(GCCGGGCG,+,0.00) -31(CCCGCCTTGCCC,+,0.00) 561_WT_peak_5934 chr5 137089850 137090082 + 158 NA promoter-TSS (NM_006805) promoter-TSS (NM_006805) 73 NM_006805 10949 Hs.96996 NM_006805 HPRD:17112 HNRNPA0 HNRPA0 heterogeneous nuclear ribonucleoprotein A0 protein-coding 0.090517 0.686695 37(AGGCCGCT,+,0.00) -110(AGGGGAGGGA,-,0.00) -146(CCCCCGCC,-,0.00) -60(CGGCTAAA,+,0.00) -9(CGCCGCCGCCGC,-,0.00) 561_WT_peak_213 chr1 45273052 45273452 + 158 NA promoter-TSS (NM_001136537) promoter-TSS (NM_001136537) -295 NM_001013632 343521 Hs.585137 NM_001013632 HPRD:15762 TCTEX1D4 - Tctex1 domain containing 4 protein-coding 0.015000 0.581047 197(AGAGGCCT,-,0.00) -87(CCTCCCTCCCAG,+,0.00) 138(GGGCCCATTT,+,0.00) 226(GCTGCGGGGG,+,0.00) 561_WT_peak_6609 chr7 21937772 21938056 + 157 NA intron (NM_001277115, intron 79 of 81) L1M7|LINE|L1 47628 NM_018719 55536 Hs.744069 NM_018719 HPRD:11481 CDCA7L JPO2|R1|RAM2 cell division cycle associated 7-like protein-coding 0.028169 0.449123 561_WT_peak_3550 chr19 633186 633683 + 157 NA exon (NM_005035, exon 1 of 21) exon (NM_005035, exon 1 of 21) 134 NM_005035 5442 Hs.254113 NM_005035 HPRD:03468 POLRMT APOLMT|MTRNAP|MTRPOL|h-mtRPOL polymerase (RNA) mitochondrial (DNA directed) protein-coding 0.104628 0.688755 217(CCGCCTGCCGGG,+,0.00) -47(TCGGTGGG,-,0.00) -40(GCTGCGCA,+,0.00) -58(GCGGGGCCGGGT,+,0.00),7(CCCCGGCCGCGC,-,0.00),209(CGCCCGCGCCGC,-,0.00) 130(CGCCGCTCCGCG,-,0.00),297(AGCGGAGGCGCG,+,0.00) -55(GGGCCGGGTC,+,0.00) 30(CACGCCGTGGCC,+,0.00) 126(GCCCCGCCGC,-,0.00),134(GCTCCGCGGC,-,0.00),254(GCTGCGAAGG,+,0.00) 43(CCGGGCTGCCTG,+,0.00),47(GCTGCCTGGCCG,+,0.00) 561_WT_peak_7254 chr9 36487978 36488349 + 157 NA Intergenic Intergenic -84696 NM_001256689 9833 Hs.184339 NM_014791 HPRD:06119 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding 0.051213 0.591398 0(AGACACTT,-,0.00) 175(CCCTGGCCCCTC,-,0.00) -131(AACTCGGCCC,-,0.00) -78(GCTTCCCCGC,-,0.00) 561_WT_peak_3318 chr17 65821530 65821820 + 157 NA promoter-TSS (NM_004459) promoter-TSS (NM_004459) -105 NM_004459 2186 Hs.444200 NM_004459 HPRD:03490 BPTF FAC1|FALZ|NURF301 bromodomain PHD finger transcription factor protein-coding 0.127586 0.749141 89(CCCCCCTGCGCC,+,0.00) -46(TGGCGGCT,+,0.00) 36(CCTCCCGCCCGG,+,0.00),85(CCGCCCCCCCTG,+,0.00) -70(CCGAGCGA,+,0.00),21(TCCGTCGG,-,0.00),25(TCGGCCGG,-,0.00) 98(GCCCGCCCCT,+,0.00) 41(CGCCCGGC,-,0.00) 23(CGTCGGCC,+,0.00) -162(GCCGCGCC,+,0.00) 42(GCCCGGCCCCGC,-,0.00) 43(CCCGGCCCCGCG,-,0.00) -129(GCGGCGCAGC,+,0.00),-129(GCGGCGCAGC,-,0.00) 26(CGGCCGGGCCCC,-,0.00) 561_WT_peak_7354 chr9 96928642 96928865 + 157 NA Intergenic CpG -9486 NR_029476 406881 NR_029476 miRBase:MI0000060 MIRLET7A1 LET7A1|MIRNLET7A1|let-7a-1 microRNA let-7a-1 ncRNA 0.152466 0.763393 28(CCGGGGGGCCGG,-,0.00) -51(GTGCGCCGGCCC,+,0.00) -132(CGGACGCG,-,0.00) -108(CGTCGCCA,+,0.00) -111(GTCCGTCG,-,0.00) 30(GGGGGGCCGGCG,+,0.00) -92(CGCGGAGACTCG,+,0.00) -3(GCGGCCTGCCCC,+,0.00) 561_WT_peak_1070 chr10 80062800 80063308 + 157 NA Intergenic CpG 35969 NR_073447 414243 Hs.55047 NR_073447 ENSG00000227136 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA 0.118110 0.748527 96(CCGCGCTCCTCC,+,0.00) 103(CCTCCCTCCCGC,+,0.00),192(GCGGGGGCGCGG,-,0.00) 215(TCGATGCC,+,0.00) 244(CCGCCCGA,+,0.00) 3(GCCCGCCCCT,+,0.00) -4(CGGCACGG,-,0.00) -70(GGGCCCAGAGGG,-,0.00) -16(CGGCTTTG,-,0.00) 51(GGCAGCAGAAGG,+,0.00) -101(GGCGCGGC,-,0.00),133(GCCGCGCC,+,0.00) 9(CCCTCGGCCCGC,-,0.00),200(GCGGGGCGGGCA,+,0.00) 84(CGCGGCTGCGCG,-,0.00),191(CGCGGGGGCGCG,+,0.00) -74(AAAGGGGCCC,-,0.00) -6(GCCGGCACGGCC,+,0.00),43(GCCGCCTTGGCA,+,0.00) 260(CGGCCGGGCCGC,-,0.00),323(CAGCCAGCCCGC,-,0.00) 561_WT_peak_7105 chr8 104426949 104427356 + 157 NA non-coding (NR_102337, exon 1 of 6) non-coding (NR_102337, exon 1 of 6) 210 NM_015420 25879 Hs.532265 NM_015420 HPRD:08528 DCAF13 GM83|WDSOF1 DDB1 and CUL4 associated factor 13 protein-coding 0.117936 0.676471 20(CGACCCGGACGC,+,0.00) -96(AAGCGGAT,+,0.00) 10(TCCACGCC,+,0.00),67(TCGACACC,+,0.00) 124(TGGCGACG,-,0.00) -148(GGGCTGACAGTG,-,0.00) -8(CGTGGCGG,+,0.00) 80(GCCCAGGGCCGC,-,0.00) -102(CCGGCGAAGC,+,0.00) 561_WT_peak_1625 chr12 22697230 22697535 + 157 NA promoter-TSS (NM_014802) promoter-TSS (NM_014802) 98 NM_001286175 9847 Hs.271014 NM_014802 HPRD:11087 C2CD5 CDP138|KIAA0528 C2 calcium-dependent domain containing 5 protein-coding 0.095082 0.640523 6(CTCTGCCGCC,-,0.00) 48(TGGCGGCT,+,0.00) 81(TCGTTCGG,-,0.00) -50(TCCCGGCCCC,+,0.00) -21(CAAAACCC,+,0.00) 100(CTTGGCGG,+,0.00) 561_WT_peak_4618 chr20 34638359 34638860 + 157 NA non-coding (NR_027451, exon 1 of 1) non-coding (NR_027451, exon 1 of 1) 273 NR_027451 647979 Hs.743232 NR_027451 ENSG00000260032 LINC00657 - long intergenic non-protein coding RNA 657 ncRNA 0.107784 0.725100 -107(GGCGGCCGAG,+,0.00),-84(CTAGGCCGCC,-,0.00),106(CACGGCCGCC,-,0.00) 212(AGAGGCCT,-,0.00) -79(CCGCCTTCCCGG,+,0.00),272(CCGCCGGCCCGG,+,0.00) -63(TCCACGCC,+,0.00) 60(TGGGTCGG,-,0.00) -13(TCCCGGCCCA,+,0.00),290(AGGGCCTGGA,-,0.00) -89(CGTCCCTA,+,0.00) 267(TTCACCCG,-,0.00) -130(TGCGCGGC,-,0.00),8(GCCGCCCA,+,0.00) 83(GCGGGGTCCGGG,+,0.00),273(CGCCGGCCCGGG,-,0.00),280(CCGGGGCCGGAG,+,0.00) -128(CGCGGCTCCGTG,-,0.00),31(GGCGGCTCTGCG,-,0.00) 5(AGCGCCGCCC,-,0.00),315(GGGCTGCGTT,+,0.00) 101(GACGCCACGGCC,+,0.00),103(CGCCACGGCCGC,-,0.00) 561_WT_peak_6033 chr5 176561126 176561561 + 157 NA intron (NM_022455, intron 1 of 22) CpG-21454 510 NM_022455 64324 Hs.106861 NM_022455 HPRD:09455 NSD1 ARA267|KMT3B|SOTOS|SOTOS1|STO nuclear receptor binding SET domain protein 1 protein-coding 0.101149 0.713303 -64(TCGGCCTCCGCC,+,0.00) -65(CTCGGCCTCC,-,0.00) 192(AGGCCTCT,+,0.00),258(AGCCGCCT,-,0.00) 64(GCGGGAAGGAGC,-,0.00),81(CCGGGCAGGCGG,-,0.00) 97(GGCGTCGG,-,0.00) -60(CCTCCGCCTCCC,-,0.00) -101(GGCGCGGC,-,0.00) -33(GCGGGGCGCGGG,+,0.00),-26(GCGGGGCCGGCT,+,0.00),74(GCGCGGCCCGGG,+,0.00),89(GCGGCGGCGGCG,+,0.00) 57(CGCGGCTGCGGG,-,0.00) -101(GGCGCGGCCC,-,0.00),73(AGCGCGGCCC,-,0.00) 163(CCGCCTCG,-,0.00),260(CCGCCTCG,-,0.00) 259(GCCGCCTCGGCC,+,0.00) -36(GCTGCGGGGC,+,0.00) 561_WT_peak_3896 chr19 55629054 55629332 + 157 NA promoter-TSS (NM_001271618) promoter-TSS (NM_001271618) -225 NM_001271618 54776 Hs.631579 NM_017607 HPRD:11452 PPP1R12C LENG3|MBS85|p84|p85 protein phosphatase 1, regulatory subunit 12C protein-coding 0.057554 0.634409 86(CGGGTAAA,+,0.00) -32(CGCAGCTCCGAG,-,0.00) 561_WT_peak_6061 chr5 180645159 180645498 + 157 NA Intergenic tRNA-Val-GTY|tRNA|tRNA 4305 NR_039781 100616342 NR_039781 miRBase:MI0017265 MIR4638 - microRNA 4638 ncRNA 0.050147 0.470588 -43(CGGTTTCG,-,0.00) 561_WT_peak_596 chr1 161735958 161736507 + 157 NA exon (NM_007348, exon 1 of 16) exon (NM_007348, exon 1 of 16) 198 NM_007348 22926 Hs.492740 NM_007348 HPRD:16118 ATF6 ATF6A activating transcription factor 6 protein-coding 0.049180 0.530909 273(TCGTTCGG,-,0.00) -97(TCGTGCGG,+,0.00),52(CGGCACCA,-,0.00),246(TCGTGCCC,+,0.00) 108(GGGGTGAGTGGG,-,0.00) 561_WT_peak_1583 chr12 9803396 9803694 + 157 NA intron (NR_002814, intron 1 of 3) MER92A|LTR|ERV1 2902 NR_046446 374443 Hs.569124 NR_002814 ENSG00000256594 LOC374443 - C-type lectin domain family 2, member D pseudogene pseudo 0.013423 0.428094 -12(CGGGCAAA,+,0.00) 561_WT_peak_1189 chr11 3862502 3863095 + 157 NA promoter-TSS (NM_001665) promoter-TSS (NM_001665) -585 NM_001665 391 Hs.501728 NM_001665 HPRD:01537 RHOG ARHG ras homolog family member G protein-coding 0.059022 0.664983 59(GGCGCAGGCGGA,-,0.00) -106(GGTGGCCGAG,+,0.00) 71(GCCGCGGG,+,0.00) -91(GGCAGTCCCCGC,-,0.00) 65(GGCGGAGCCGCG,+,0.00) 122(CCTGCGAGGC,+,0.00) 127(GAGGCCTGGCTC,+,0.00) 561_WT_peak_7638 chrY 2332121 2332555 + 157 NA intron (NM_145177, intron 1 of 6).2 intron (NM_145177, intron 1 of 6).2 36242 NM_001171135 9189 Hs.131452 NM_004729 HPRD:02170 ZBED1 ALTE|DREF|TRAMP|hDREF zinc finger, BED-type containing 1 protein-coding 0.048387 0.544828 -55(ATGTGGCT,+,0.00) -137(CGTGGCTA,+,0.00) -122(GCCGCCATGTAC,+,0.00),207(GCCGCCATGTTC,+,0.00) 561_WT_peak_6151 chr6 26196729 26197650 + 157 NA exon (NM_003530, exon 2 of 2) exon (NM_003530, exon 2 of 2) 2332 NM_003530 8351 Hs.532144 NM_003530 HPRD:11905 HIST1H3D H3/b|H3FB histone cluster 1, H3d protein-coding 0.053203 0.533623 453(CGGGCCGGTAAC,+,0.00) 637(CGTACCCG,-,0.00) 407(TCGGTCGA,-,0.00) 447(CCGTGCCG,+,0.00) 422(TAGCGGCG,-,0.00) 143(GGGTTTTG,-,0.00) -79(AAAGCGGCCC,-,0.00) 290(GCCTCGCAGG,-,0.00) 561_WT_peak_5592 chr4 128981905 128982390 + 157 NA promoter-TSS (NM_032239) promoter-TSS (NM_032239) -274 NM_001278604 55132 Hs.657067 NM_018078 HPRD:10963 LARP1B LARP2 La ribonucleoprotein domain family, member 1B protein-coding 0.115464 0.748971 73(CTTGGCCGCC,-,0.00) 122(AGAGGCCT,-,0.00) 258(CCGGGCGGGCGA,-,0.00) -38(GGGGTCGA,-,0.00),-34(TCGACACC,+,0.00) -102(GGGCGCCAGCGG,+,0.00) 243(CGGGCCGGGC,-,0.00) -105(GCCGGGCG,+,0.00),-42(GCCGGGGG,+,0.00),86(GCCGCGGG,+,0.00),246(GCCGGGCG,+,0.00) 242(TCGGGCCG,+,0.00) 272(CCGTCAGCTCCC,-,0.00) 54(TGCGCGGC,-,0.00),132(TGCGCGCT,-,0.00) -94(GCGGGCCAAGCG,+,0.00),79(CGCCGTCGCCGC,-,0.00) -151(CGCGGTGCCCCG,+,0.00) 77(GCCGCCGTCGCC,+,0.00) -77(GCCGCGGAGC,+,0.00) -85(GCGGCCGGGCCG,+,0.00),-84(CGGCCGGGCCGC,-,0.00),92(GGGGCAGGCCGC,-,0.00) 561_WT_peak_6220 chr6 27791597 27792395 + 157 NA promoter-TSS (NM_021968) promoter-TSS (NM_021968) 93 NM_021968 8363 Hs.278483 NM_021968 HPRD:11917 HIST1H4J H4/e|H4F2iv|H4FE|dJ160A22.2 histone cluster 1, H4j protein-coding 0.070175 0.549437 100(AGAGGCCT,-,0.00) 60(TCGGTCCG,-,0.00) 183(CGGCGCTA,+,0.00) -12(CGGTTTGG,-,0.00),438(CGGTTTCG,-,0.00),531(TGGTTTTG,-,0.00) 618(TTCACCCG,-,0.00) 311(GGGTGCTGAAGG,+,0.00) -47(GAAACAAGAAGC,+,0.00) 418(CGCCAGGGCCGC,-,0.00) 561_WT_peak_2220 chr14 55493928 55494343 + 156 NA promoter-TSS (NM_007086) promoter-TSS (NM_007086) 291 NM_199421 122809 Hs.744302 NM_080867 HPRD:18084 SOCS4 SOCS7 suppressor of cytokine signaling 4 protein-coding 0.055422 0.615385 148(TTCCTGCCCT,+,0.00) 218(GGGCCCAGTT,+,0.00) 127(GCCTCGCAGG,-,0.00) 561_WT_peak_7172 chr8 141601373 141601878 + 156 NA intron (NM_012154, intron 1 of 18) intron (NM_012154, intron 1 of 18) 44021 NM_012154 27161 Hs.743313 NM_012154 HPRD:06943 AGO2 EIF2C2|Q10 argonaute RISC catalytic component 2 protein-coding 0.019802 0.468379 11(AACCACTT,-,0.00) -35(GACACAGGCAGC,+,0.00) 561_WT_peak_6095 chr6 8435439 8435726 + 156 NA promoter-TSS (NR_038979) promoter-TSS (NR_038979) 218 NM_001142541 51000 Hs.285847 NM_015948 HPRD:11577 SLC35B3 C6orf196|PAPST2 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3 protein-coding 0.069686 0.625000 76(TCCTCCTCCTCC,+,0.00) -34(CGCGTACC,+,0.00) 57(CGTCGCCA,+,0.00) 54(GTCCGTCG,-,0.00) 561_WT_peak_3780 chr19 42746773 42747378 + 156 NA promoter-TSS (NM_019884) promoter-TSS (NM_019884) -339 NM_019884 2931 Hs.466828 NM_019884 HPRD:06002 GSK3A - glycogen synthase kinase 3 alpha protein-coding 0.082645 0.605611 204(TCGTCGCC,+,0.00) -143(CGTCCGCG,-,0.00) 174(TCGGGCCG,+,0.00) -164(CGGGAGATGCAG,+,0.00) 205(CGTCGCCA,+,0.00) 22(GTACGACG,-,0.00) 336(TTTACGCG,-,0.00) -123(CCCTCGGCCCGC,-,0.00) 561_WT_peak_650 chr1 183885292 183885516 + 156 NA intron (NM_001297671, intron 15 of 17) intron (NM_001297671, intron 15 of 17) 111189 NM_001297672 23179 Hs.497148 NM_015149 HPRD:12032 RGL1 RGL ral guanine nucleotide dissociation stimulator-like 1 protein-coding 0.008929 0.457778 561_WT_peak_3260 chr17 56084386 56084666 + 156 NA non-coding (NR_034041, exon 1 of 4) non-coding (NR_034041, exon 1 of 4) 181 NR_034041 6426 Hs.68714 NM_006924 SRSF1 ASF|SF2|SF2p33|SFRS1|SRp30a serine/arginine-rich splicing factor 1 protein-coding 0.092857 0.608541 36(CCCGCGGC,-,0.00) 23(CGGCACCA,-,0.00) -59(CCCGACATGGCG,+,0.00),-57(CGACATGGCGGT,-,0.00) 561_WT_peak_6680 chr7 63386651 63386912 + 156 NA Intergenic CpG 103699 NR_039987 100506050 Hs.405628 NR_039987 LINC01005 - long intergenic non-protein coding RNA 1005 ncRNA 0.076628 0.625954 -164(AGCCGCTT,-,0.00) -84(GGGGGGGCAGCG,+,0.00),-73(GCGGGGCGCGCC,+,0.00) 561_WT_peak_3920 chr19 58125582 58125906 + 156 NA promoter-TSS (NM_003435) promoter-TSS (NM_003435) -86 NM_003435 7693 Hs.469694 NM_003435 ZNF134 pHZ-15 zinc finger protein 134 protein-coding 0.117284 0.701538 98(GGCGGCCGCG,+,0.00) -38(AAGTCGCT,+,0.00) -78(TGGGCGGT,-,0.00) 32(GCGGTGCCAGGG,+,0.00) 65(CGCGGCTCCGGG,-,0.00) -125(CTTGTCGG,+,0.00) 561_WT_peak_3391 chr17 79829284 79829682 + 156 NA promoter-TSS (NM_001185078) promoter-TSS (NM_001185078) -201 NM_001301240 396 Hs.159161 NM_004309 HPRD:03565 ARHGDIA GDIA1|HEL-S-47e|NPHS8|RHOGDI|RHOGDI-1 Rho GDP dissociation inhibitor (GDI) alpha protein-coding 0.125628 0.731830 90(GGCGGCCGCG,+,0.00) -60(GGCGTCGT,-,0.00),79(TCGAGGCC,+,0.00) 1(CCTACGCG,-,0.00) -163(TCGGGCGG,-,0.00),150(TCGGTCCG,-,0.00) -122(GCCGGGGG,+,0.00) -109(CGTCGCCA,+,0.00) 153(GTCCGACT,-,0.00) -139(TGCGCGGC,-,0.00),113(CCCGCGCA,+,0.00) -151(GGCCAGGGCGCA,-,0.00),10(GCCCAGGGCGCC,-,0.00) 561_WT_peak_4312 chr2 135809746 135810415 + 156 NA intron (NM_001172435, intron 2 of 24) intron (NM_001172435, intron 2 of 24) 245 NM_001172435 22930 Hs.306327 NM_012233 HPRD:16002 RAB3GAP1 P130|RAB3GAP|RAB3GAP130|WARBM1 RAB3 GTPase activating protein subunit 1 (catalytic) protein-coding 0.061286 0.559701 197(TAGCCGCT,+,0.00),198(AGCCGCTT,-,0.00),303(AAGCCTCT,+,0.00) -109(CCGGGGGCGGGG,-,0.00) -120(GGGCGGGGGCTC,-,0.00),-58(TAGCGCCAGGCC,+,0.00),-50(GGCCCGGCGCTC,-,0.00) -119(GGCGGGGG,+,0.00) 480(CGGTTTTC,-,0.00) 182(GGCCCTGGCGTC,-,0.00) 561_WT_peak_2614 chr15 92401013 92401391 + 156 NA intron (NM_013272, intron 1 of 9) intron (NM_013272, intron 1 of 9) 4264 NM_013272 28232 Hs.311187 NM_013272 HPRD:07502 SLCO3A1 OATP-D|OATP3A1|OATPD|SLC21A11 solute carrier organic anion transporter family, member 3A1 protein-coding 0.005291 0.382586 -160(AAGCCTCT,+,0.00) 561_WT_peak_2410 chr15 25683509 25684145 + 156 NA 5' UTR (NM_000462, exon 1 of 14) 5' UTR (NM_000462, exon 1 of 14) 348 NM_000462 7337 Hs.598862 NM_000462 HPRD:03375 UBE3A ANCR|AS|E6-AP|EPVE6AP|HPVE6A ubiquitin protein ligase E3A protein-coding 0.141509 0.742543 19(TCGCCCGCCGCC,+,0.00) -96(GCCGGCCGAG,+,0.00),18(CTCGCCCGCC,-,0.00) -138(CGGGGAAGGGGG,-,0.00) -127(GGTGTCGA,-,0.00),-34(TCGTCGCC,+,0.00),156(TCGTCGCC,+,0.00) -95(CCGGCCGA,+,0.00) -147(GGCGGGGG,+,0.00) 157(CGTCGCCA,+,0.00) 190(GGGCTGAGGGGC,-,0.00) -107(GGGCCCCGAAGG,+,0.00),241(AGGAGCCGAAGG,+,0.00) -79(GGGGAGCCAGCG,+,0.00),-59(CGCAGGCCGCGG,-,0.00),83(GCGGGACCCGCG,+,0.00),130(CGCCGGGGCCGC,-,0.00),132(CCGGGGCCGCCG,+,0.00) 42(CCGCCTCG,-,0.00),343(CTACGCGG,+,0.00) 255(GCGCCGCCGC,-,0.00) 561_WT_peak_4379 chr2 178257179 178257768 + 156 NA promoter-TSS (NM_003659) promoter-TSS (NM_003659) 2 NM_003659 8540 Hs.516543 NM_003659 HPRD:04337 AGPS ADAP-S|ADAS|ADHAPS|ADPS|ALDHPSY alkylglycerone phosphate synthase protein-coding 0.120543 0.730508 39(AGACGCAT,-,0.00) -4(GAGCGCCGGCGC,+,0.00) 105(GCCGGGCG,+,0.00),274(GCCGGGCG,+,0.00) 101(TCGCGCCG,+,0.00) 129(TTCACCCG,-,0.00) -30(TGCGCGCT,-,0.00),3(GGCGCGGT,-,0.00),269(ACCGCGCC,+,0.00),400(GCCGCGCA,+,0.00) 309(GCTGGGCCGGCC,+,0.00),313(GGCCGGCCCCGG,-,0.00) 355(CGGAGAGCCGCG,+,0.00) 55(CCGCCAAG,-,0.00),362(CCGCGTCG,-,0.00) 169(GTAGCCATGGCG,+,0.00),171(AGCCATGGCGGA,-,0.00),372(GGCCACGGCAGC,-,0.00) 85(GCGCCGCAGC,-,0.00) 561_WT_peak_5006 chr3 12598352 12598846 + 156 NA promoter-TSS (NM_014160) promoter-TSS (NM_014160) 86 NM_014160 23609 Hs.591666 NM_014160 HPRD:09761 MKRN2 RNF62 makorin ring finger protein 2 protein-coding 0.115385 0.713131 -124(CGCCCCGGAGGC,+,0.00) -71(CGGCCCGA,-,0.00),102(CGGCACGA,-,0.00),184(TCGGGCCG,+,0.00) -20(CGGCGCTA,+,0.00) -29(GTTACCCG,-,0.00) 56(GCCGGGCCAGGG,+,0.00) 38(CGCGGCTACGCG,-,0.00) -129(GGCTCCGCCC,-,0.00),186(GGGCCGCTCC,+,0.00) 43(CTACGCGG,+,0.00),75(CGAGGCGG,+,0.00) 72(GGCCGAGGCGGC,-,0.00) 284(GCGGCGGGGC,+,0.00) -135(CAGCCAGGCTCC,-,0.00),194(CCCCCAGGCCGC,-,0.00) 561_WT_peak_2938 chr16 87799596 87800092 + 156 NA promoter-TSS (NM_017566) promoter-TSS (NM_017566) -246 NM_001184856 54758 Hs.123450 NM_017566 HPRD:11180 KLHDC4 - kelch domain containing 4 protein-coding 0.074597 0.617706 -132(GCTTCCGGGTAG,-,0.00) -136(AGCCGCTT,-,0.00) -139(TCGAGCCG,+,0.00) 112(AGTCGCTA,+,0.00) -55(CCTCGGAC,+,0.00) -93(CGGTCTTG,-,0.00) -127(CGGGTAGA,+,0.00) -7(GGCGCGGT,-,0.00) 35(CTTGGCGG,+,0.00) 32(GGCCTTGGCGGG,-,0.00) 561_WT_peak_7214 chr9 15422560 15422914 + 156 NA promoter-TSS (NM_001039697) promoter-TSS (NM_001039697) -45 NM_001039697 6619 Hs.546299 NM_003084 HPRD:03826 SNAPC3 PTFbeta|SNAP50 small nuclear RNA activating complex, polypeptide 3, 50kDa protein-coding 0.101695 0.676056 -163(CCGCCCTACCGG,+,0.00) 67(GCCGGGCG,+,0.00) -17(GCCGCGCC,+,0.00) -23(CGCGGTGCCGCG,+,0.00),-23(CGCGGTGCCGCG,-,0.00) 49(CCGCCTCG,-,0.00) 51(GCCTCGCCGC,-,0.00) 561_WT_peak_3801 chr19 45971362 45972053 + 156 NA 5' UTR (NM_001114171, exon 1 of 3) 5' UTR (NM_001114171, exon 1 of 3) 454 NM_006732 2354 Hs.590958 NM_006732 HPRD:01270 FOSB AP-1|G0S3|GOS3|GOSB FBJ murine osteosarcoma viral oncogene homolog B protein-coding 0.053546 0.575145 346(GACTCCGGCTCC,-,0.00) 78(AGCGGCAT,-,0.00) 152(GCTCCTTCCCCG,+,0.00) -46(CGGACGCG,-,0.00) -58(CGTGGGAC,+,0.00),-49(CGCCGGAC,+,0.00),47(GTCCTACG,-,0.00) 330(TTTCCCCG,-,0.00) 347(ACTCCGGCTCCC,-,0.00) 268(GCTTCCCGGC,-,0.00) 561_WT_peak_7460 chr9 132650567 132650974 + 156 NA 3' UTR (NM_015033, exon 17 of 17) 3' UTR (NM_015033, exon 17 of 17) 18886 NR_106914 102466750 NR_106914 MIR6855 hsa-mir-6855 microRNA 6855 ncRNA 0.039312 0.583333 213(AGCCACTT,-,0.00) -73(GGCGGGGG,+,0.00) 164(GGGAAGAAGCAG,+,0.00) -72(GCGGGGGAGC,+,0.00) 561_WT_peak_2496 chr15 57025691 57025997 + 156 NA 5' UTR (NM_001288588, exon 1 of 22) 5' UTR (NM_001288588, exon 1 of 22) 440 NM_017661 54816 Hs.511477 NM_017661 HPRD:15448 ZNF280D SUHW4|ZNF634 zinc finger protein 280D protein-coding 0.120915 0.723127 -21(GGCTCCGGGTCA,-,0.00) -81(GGCAGCCGAG,+,0.00) 27(CGCGGGAGGCGG,-,0.00) -51(TCGTGCAG,+,0.00) -113(GCGGCGACGGCG,+,0.00),101(CCGGGGCGAGGG,+,0.00) 24(CGACGCGG,+,0.00),54(CCGCGTCG,-,0.00),57(CGTCGCGG,+,0.00),86(CCGCCACG,-,0.00) -111(GGCGACGGCGGC,-,0.00) 561_WT_peak_3110 chr17 29835772 29836035 + 156 NA intron (NM_032932, intron 3 of 14) intron (NM_032932, intron 3 of 14) -25998 NR_039877 100616248 NR_039877 miRBase:MI0017361 MIR4724 - microRNA 4724 ncRNA 0.019011 0.522727 561_WT_peak_3930 chr19 58789759 58790230 + 156 NA promoter-TSS (NM_021089) promoter-TSS (NM_021089) -324 NM_021089 7554 Hs.590941 NM_021089 HPRD:01919 ZNF8 HF.18|Zfp128 zinc finger protein 8 protein-coding 0.063694 0.620763 -69(AGCCGCTA,-,0.00),187(AGGCCTCT,+,0.00) -85(CAGCCTCCCCGC,+,0.00) 231(CAACACCG,+,0.00) 20(AGGGTAAA,+,0.00) 12(GGGAGCAGAGGG,+,0.00) 50(CCCGCGCA,+,0.00),82(CCCGCGCA,+,0.00) 32(CGCAGCTCCGGG,-,0.00) 25(AAAGCGGCGC,-,0.00),232(AACACCGCCC,-,0.00) 63(CCGAGAAG,-,0.00) 28(GCGGCGCAGC,+,0.00),28(GCGGCGCAGC,-,0.00),215(GCATCGCAGC,-,0.00) 561_WT_peak_6701 chr7 72300318 72300840 + 156 NA intron (NR_024109, intron 1 of 2) intron (NR_024109, intron 1 of 2) 627 NR_024109 155370 Hs.585053 NR_001588 ENSG00000225648 SBDSP1 SBDSP Shwachman-Bodian-Diamond syndrome pseudogene 1 pseudo 0.038314 0.533461 -127(AGCGGCTT,-,0.00) 28(CGTCGCTG,+,0.00) 101(GGGTTTTG,-,0.00) -69(CGAGGCGG,+,0.00) -65(GCGGCCTGTCTC,+,0.00) 561_WT_peak_2443 chr15 41913899 41914211 + 156 NA Intergenic CpG -38555 NM_001164273 23269 Hs.187569 NM_001080541 ENSG00000174197 MGA MAD5|MXD5 MGA, MAX dimerization protein protein-coding 0.102564 0.667732 -124(TGGACGCC,+,0.00) -155(GGCGGGGG,+,0.00),-149(GGCGGGGG,+,0.00) 28(TCGTGGCG,+,0.00) -65(GTGCGACG,-,0.00) -83(TTTCCCCG,-,0.00) -154(GCGGGGGCGGGG,+,0.00) 116(GGGCCGCGTG,+,0.00) 561_WT_peak_1651 chr12 34175147 34175595 + 156 NA 5' UTR (NM_032834, exon 1 of 3) 5' UTR (NM_032834, exon 1 of 3) 155 NM_032834 84920 Hs.102971 NM_032834 ALG10 ALG10A|DIE2|KCR1 ALG10, alpha-1,2-glucosyltransferase protein-coding 0.066964 0.534521 250(CTCGGCCGCC,-,0.00) -132(AAGCGGCT,+,0.00),-131(AGCGGCTT,-,0.00) -50(CCGCCCCTTCCG,-,0.00) -54(AGACCCGCCC,-,0.00) 124(CCGCCTAG,-,0.00) 561_WT_peak_4400 chr2 191884983 191885541 + 155 NA Intergenic CpG -6286 NM_139266 6772 Hs.642990 NM_007315 HPRD:02777 STAT1 CANDF7|ISGF-3|STAT91 signal transducer and activator of transcription 1, 91kDa protein-coding 0.105735 0.656530 -99(AACCGCTT,-,0.00) 213(CGCACGCG,-,0.00) 100(CCGCTTCCTCCC,-,0.00) -21(CGGGGAAA,+,0.00),381(TTTACCCG,-,0.00) -115(TGCGCGGT,-,0.00) -84(AGCTGGCCCGGC,-,0.00) 248(GGCGGAGGCGCG,+,0.00) -41(AGAGCCGCCC,-,0.00),204(CACGCGGCCC,-,0.00) 120(CTCCCTGGCGGC,-,0.00) 79(GCAGCGGGGC,+,0.00) 561_WT_peak_5937 chr5 137688050 137688355 + 155 NA promoter-TSS (NM_016604) promoter-TSS (NM_016604) -83 NM_016604 51780 Hs.483486 NM_016604 HPRD:11055 KDM3B 5qNCA|C5orf7|JMJD1B|NET22 lysine (K)-specific demethylase 3B protein-coding 0.078689 0.692810 40(TCGCCCCGCTCC,+,0.00) 17(GCGCTGCGAGGG,-,0.00) -82(GGAAGCTGAAGG,+,0.00) 84(TGCGGCTCCGCT,-,0.00) 19(GCTGCGAGGG,+,0.00) 561_WT_peak_1320 chr11 62477134 62477468 + 155 NA promoter-TSS (NR_037949) promoter-TSS (NR_037949) -210 NR_037949 26580 Hs.533709 NM_032667 HPRD:05858 BSCL2 GNG3LG|HMN5|PELD|SPG17 Berardinelli-Seip congenital lipodystrophy 2 (seipin) protein-coding 0.071856 0.585075 49(GGCCGACG,-,0.00) -72(CCGGGGCCCGCG,+,0.00) 561_WT_peak_5213 chr3 113932477 113933471 + 155 NA Intergenic Intergenic -14720 NM_001282563 1814 Hs.121478 NM_000796 HPRD:00540 DRD3 D3DR|ETM1|FET1 dopamine receptor D3 protein-coding 0.019115 0.466332 222(AGGTTTTG,-,0.00) 208(TTTACACG,-,0.00),402(CGGGTGAA,+,0.00) -113(GCTTCCCCTTTC,-,0.00),583(GAAGCAGGAAGG,+,0.00) 561_WT_peak_2205 chr14 51342180 51342482 + 155 NA intron (NM_181814, intron 1 of 10) intron (NM_181814, intron 1 of 10) 3453 NM_181814 145447 Hs.271896 NM_181533 ENSG00000131969 ABHD12B BEM46L3|C14orf29|c14_5314 abhydrolase domain containing 12B protein-coding 0.013245 0.481848 -41(ATGTGGCT,+,0.00) 561_WT_peak_6118 chr6 18264548 18264825 + 155 NA 5' UTR (NM_001134709, exon 1 of 10) 5' UTR (NM_001134709, exon 1 of 10) 113 NM_003472 7913 Hs.484813 NM_003472 HPRD:00503 DEK D6S231E DEK proto-oncogene protein-coding 0.162455 0.733813 -89(TTCGGCCGCC,-,0.00),-35(GGCGGCCGAC,+,0.00) -30(CCGACGCC,+,0.00) -82(GCCGCGGG,+,0.00) -62(GGGCACGA,-,0.00),15(TCGCGCCG,+,0.00) -149(CGTCGGCC,+,0.00),-32(GGCCGACG,-,0.00) 25(CGCTCGGCTCCC,-,0.00) 12(CGCTCGCGCCGC,-,0.00) -7(GGGCCGCTGT,+,0.00) 561_WT_peak_3884 chr19 52693262 52693694 + 154 NA intron (NM_014225, intron 1 of 14) CpG 423 NM_014225 5518 Hs.467192 NM_014225 PPP2R1A PP2A-Aalpha|PP2AAALPHA|PR65A protein phosphatase 2, regulatory subunit A, alpha protein-coding 0.111111 0.692841 -71(GGCGGCCGAC,+,0.00) -61(GGCGACGA,-,0.00) 222(TCCCGGGCCT,+,0.00) 195(GGCGGGGG,+,0.00) 25(GGGAAGACGCGG,+,0.00) -68(GGCCGACG,-,0.00) -155(CCTTCTTCTCCC,-,0.00) 197(CGGGGGCCAGCG,+,0.00) 561_WT_peak_423 chr1 143743193 143743755 + 154 NA intron (NR_027468, intron 1 of 4) CpG 1045 NR_104014 388685 Hs.713362 NM_207400 LINC01138 LINC00875 long intergenic non-protein coding RNA 1138 ncRNA 0.072954 0.635879 38(CCGGGCGGGAGG,-,0.00),183(CGGGGAGGCCGG,-,0.00),207(CCGGGCTCGCGG,-,0.00) 62(GGCGGCGA,-,0.00) 198(CAGCCCCAGCCG,+,0.00) 178(CCGGTCGG,-,0.00) 37(GCCGGGCG,+,0.00),133(CCCCCGGC,-,0.00) 86(GTCCGAGG,-,0.00) 44(GGGAGGCGAGGG,+,0.00),348(TGGAGCCGAAGG,+,0.00) -61(GAAACAGAAAGT,+,0.00) 76(TCCGCGCA,+,0.00) 152(GGTGCCATGGCA,+,0.00) 29(GAGGCCTGGCCG,+,0.00),122(GCGGCAGGCCGC,-,0.00) 561_WT_peak_3406 chr18 10335 10515 + 154 NA Intergenic (CCCTAA)n|Simple_repeat|Simple_repeat -1650 NR_110795 102723376 Hs.606852 NR_110795 LOC102723376 - uncharacterized LOC102723376 ncRNA 0.000000 0.558011 561_WT_peak_4092 chr2 62115366 62115789 + 154 NA exon (NM_001256721, exon 1 of 13) exon (NM_001256721, exon 1 of 13) 229 NM_006430 10575 Hs.421509 NM_006430 HPRD:05506 CCT4 CCT-DELTA|Cctd|SRB chaperonin containing TCP1, subunit 4 (delta) protein-coding 0.092199 0.636792 79(TCGCCCCGCTCC,+,0.00),240(GGAGGAGGCGGA,-,0.00),246(GGCGGAGGCGGA,-,0.00) 155(GGACCCGGATTC,+,0.00) 55(CGCGGCCGCC,-,0.00) 9(AAGCGGAT,+,0.00) 233(GGCGTCGG,-,0.00) -50(CCCGCGGC,-,0.00),-42(GCCGCGGG,+,0.00),53(CCCGCGGC,-,0.00) -90(CAAACCCG,+,0.00) 225(GCGGCGCCGGCG,+,0.00) -48(CGCGGCGCCGCG,+,0.00),-48(CGCGGCGCCGCG,-,0.00) 222(AAAGCGGCGC,-,0.00) 561_WT_peak_1959 chr13 25523226 25523401 + 154 NA intron (NR_026730, intron 2 of 4) intron (NR_026730, intron 2 of 4) 19294 NR_026730 646405 Hs.620592 NM_001126062 TPTE2P1 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1 pseudo 0.011429 0.375000 561_WT_peak_192 chr1 40204591 40204792 + 154 NA intron (NM_203456, intron 1 of 9) CpG 174 NM_203456 10450 Hs.524690 NM_006112 HPRD:03893 PPIE CYP-33|CYP33 peptidylprolyl isomerase E (cyclophilin E) protein-coding 0.059701 0.618812 -66(GGAGGACGGCGA,-,0.00) -116(AACGCGACCC,-,0.00) -134(CTAGGCGG,+,0.00) 561_WT_peak_6513 chr6 149866503 149866755 + 154 NA intron (NM_139126, intron 1 of 12) intron (NM_139126, intron 1 of 12) 609 NM_139126 85313 Hs.744238 NM_139126 HPRD:07606 PPIL4 HDCME13P peptidylprolyl isomerase (cyclophilin)-like 4 protein-coding 0.027778 0.513834 14(TTTAACCG,-,0.00),58(CGAGTAAA,+,0.00) 561_WT_peak_3791 chr19 45393439 45393961 + 154 NA promoter-TSS (NM_006114) promoter-TSS (NM_006114) -777 NM_001128917 10452 Hs.655909 NM_006114 HPRD:16274 TOMM40 C19orf1|D19S1177E|PER-EC1|PEREC1|TOM40 translocase of outer mitochondrial membrane 40 homolog (yeast) protein-coding 0.040230 0.523901 341(GGGCCCGGCTGC,+,0.00) 308(TAGGTCGG,-,0.00) 5(AGGGCCGGAA,-,0.00) 302(CGGTTTTA,-,0.00) -136(AGGAGCCCAAGG,+,0.00) 231(CGAGGAGCAGCG,+,0.00) 340(GGGGCCCGGCTG,+,0.00) 561_WT_peak_3340 chr17 73257893 73258233 + 154 NA promoter-TSS (NM_014001) promoter-TSS (NM_014001) 314 NM_015971 51081 Hs.71787 NM_015971 HPRD:17601 MRPS7 MRP-S|MRP-S7|RP-S7|RPMS7|S7mt|bMRP27a mitochondrial ribosomal protein S7 protein-coding 0.073529 0.659824 28(GGCGGGGG,+,0.00) 5(AGGGTGAGAGGG,-,0.00) -146(TTCACCCG,-,0.00) -73(GGCTGCCCCCGC,-,0.00) 62(CAGGCAGGCCGC,-,0.00) 561_WT_peak_3956 chr2 9748063 9748386 + 154 NA intron (NM_006826, intron 2 of 5) intron (NM_006826, intron 2 of 5) 22960 NM_006826 10971 Hs.74405 NM_006826 HPRD:00886 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta protein-coding 0.018576 0.388889 561_WT_peak_6592 chr7 8215858 8216638 + 154 NA intron (NM_001276478, intron 6 of 13) intron (NM_001276478, intron 6 of 13) 85434 NM_022307 3382 Hs.487561 NM_004968 HPRD:00971 ICA1 ICA69|ICAp69 islet cell autoantigen 1, 69kDa protein-coding 0.014103 0.464789 554(AACCACTT,-,0.00) 123(CTGCACGA,-,0.00) 63(CAAAACCG,+,0.00) 489(GAAACATTAAGC,+,0.00) 561_WT_peak_704 chr1 206785500 206785937 + 154 NA 5' UTR (NM_006893, exon 1 of 15) 5' UTR (NM_006893, exon 1 of 15) 186 NM_006893 1939 Hs.497581 NM_006893 HPRD:01057 EIF2D HCA56|LGTN eukaryotic translation initiation factor 2D protein-coding 0.057208 0.678082 -133(TCGGCCTCCACC,+,0.00) -134(CTCGGCCTCC,-,0.00),209(CGCGGCCGCC,-,0.00) -71(AGGTGTCT,+,0.00) 246(AGGGCAGGGA,-,0.00) -102(TAGCGAGG,-,0.00) 247(GGGCAGGGAGGG,-,0.00) -22(GTCCGACC,-,0.00) 6(TTGACCCG,-,0.00) 173(GCCGCGCA,+,0.00) 100(GCTGCCAGGC,+,0.00),173(GCCGCGCAGC,-,0.00) 135(GGGGCCCGGCCG,+,0.00) 561_WT_peak_3578 chr19 3435037 3435437 + 153 NA intron (NM_001245005, intron 6 of 9) CpG-12493 45303 NM_001136503 284422 Hs.130714 NM_001136503 ENSG00000095932 SMIM24 C19orf77 small integral membrane protein 24 protein-coding 0.102500 0.668329 -68(GGCGGCGA,-,0.00) 16(GGCGGGGG,+,0.00),91(GCCGCGGG,+,0.00),117(GCCGCGGG,+,0.00) -113(CGGCACAA,-,0.00),143(TCGTCCCG,+,0.00) 82(TGCGCGGG,-,0.00) 23(GCGGAGCCGGCC,+,0.00),84(CGCGGGCGCCGC,-,0.00) 111(CCTGGAGCCGCG,+,0.00) 21(GGGCGGAGCC,+,0.00) 51(CGTGGCGG,+,0.00) -74(AGCCCTGGCGGC,-,0.00) 91(GCCGCGGGGC,+,0.00),117(GCCGCGGGGC,+,0.00),211(GCGGCGAAGG,+,0.00) 561_WT_peak_6388 chr6 88411628 88412053 + 153 NA 5' UTR (NM_018064, exon 1 of 5) 5' UTR (NM_018064, exon 1 of 5) 145 NM_018064 55122 Hs.485915 NM_018064 HPRD:12864 AKIRIN2 C6orf166|FBI1|dJ486L4.2 akirin 2 protein-coding 0.117647 0.659624 132(AACCGCTT,-,0.00) 184(GGCGTCAA,-,0.00) 45(CGAGTACG,+,0.00) -77(CCCCCGCC,-,0.00) 209(CAAATCCG,+,0.00),249(CCAAACCG,+,0.00) -108(GGCGCGGC,-,0.00),-52(GCCGCGCC,+,0.00) -82(GGCCGCCCCCGC,-,0.00) -106(CGCGGCTCCCCC,-,0.00) 25(AACGCGGCTC,-,0.00) 561_WT_peak_3022 chr17 7591448 7591697 + 153 NA promoter-TSS (NM_001143992) promoter-TSS (NM_001143992) -95 NM_018081 55135 Hs.408312 NM_018081 HPRD:07670 WRAP53 DKCB3|TCAB1|WDR79 WD repeat containing, antisense to TP53 protein-coding 0.076305 0.620000 -102(GCGGGGGGGCGG,-,0.00) -48(CGTAGGCG,-,0.00) -61(TCGGTAGG,-,0.00) -103(GGCGGGGG,+,0.00) 57(CCCGGCTCCGCG,-,0.00) 561_WT_peak_1874 chr12 117628061 117628268 + 153 NA exon (NM_015002, exon 1 of 12) exon (NM_015002, exon 1 of 12) 136 NM_033624 23014 Hs.740376 NM_015002 HPRD:09948 FBXO21 FBX21 F-box protein 21 protein-coding 0.120773 0.721154 -25(GCGGCCTCCTCC,+,0.00) -5(CGGCACCA,-,0.00) -39(CCGCTACCTCCG,-,0.00) -28(GGCGCGGC,-,0.00) -153(CGCGCAGCCGCC,+,0.00) 561_WT_peak_519 chr1 150601754 150602072 + 153 NA promoter-TSS (NM_207045) promoter-TSS (NM_207045) 185 NM_207044 2029 Hs.632456 NM_004436 HPRD:11927 ENSA ARPP-19e endosulfine alpha protein-coding 0.066038 0.636364 -57(CTCGCCCGCC,-,0.00) 60(CCGGGAAGGCAA,-,0.00) 118(GCTTCGGCTCCT,-,0.00) 9(TCTTCTTGTTTC,-,0.00) -130(GCGGAGCCTGAG,+,0.00) -119(GACCATGGCGAC,-,0.00),23(GGACATGGCGGG,-,0.00) -133(CCTGCGGAGC,+,0.00) 561_WT_peak_1982 chr13 31318502 31318757 + 153 NA intron (NM_001204406, intron 3 of 5) intron (NM_001204406, intron 3 of 5) 8984 NM_001629 241 Hs.507658 NM_001629 HPRD:04742 ALOX5AP FLAP arachidonate 5-lipoxygenase-activating protein protein-coding 0.007843 0.527344 561_WT_peak_1674 chr12 48206727 48207319 + 153 NA intron (NM_001098416, intron 1 of 24) CpG 6740 NM_001098416 51564 Hs.200063 NM_015401 HPRD:09133 HDAC7 HD7A|HDAC7A histone deacetylase 7 protein-coding 0.054054 0.650927 -21(CCGCCCGCCCCG,+,0.00) 94(CCCCCGCC,-,0.00) 387(GGGAGGAAGCTG,+,0.00) -26(GTCCGCCG,-,0.00) -38(CGGGCAAA,+,0.00) -9(CCTCCAGCTCCC,-,0.00),49(CCTCCAGCTCCC,-,0.00),66(CCTGGGGCTCCC,-,0.00),79(CCTTCACCTCCC,-,0.00) -153(GCGAGGCCTGCG,+,0.00),-20(CGCCCGCCCCGC,-,0.00) 561_WT_peak_1197 chr11 8008537 8009144 + 153 NA promoter-TSS (NM_003754) promoter-TSS (NM_003754) -27 NM_003754 8665 Hs.516023 NM_003754 HPRD:04887 EIF3F EIF3S5|eIF3-p47 eukaryotic translation initiation factor 3, subunit F protein-coding 0.065898 0.575658 303(GGCTCCGGTTCC,-,0.00) 347(CGGCAGCAGCGG,+,0.00) -34(TTTACCCG,-,0.00) -96(GCTTTCTGGTTC,-,0.00) 259(GCGGCCCCAGCC,+,0.00) 72(CCGAGAAG,-,0.00) 561_WT_peak_6569 chr7 1199993 1200269 + 153 NA promoter-TSS (NM_182491) promoter-TSS (NM_182491) 121 NR_110067 101927021 Hs.529566 NR_110065 LOC101927021 - uncharacterized LOC101927021 ncRNA 0.119565 0.714801 -5(GGAGGAGGCCTA,-,0.00) -82(GGCGGGCGAG,+,0.00) -107(AGGCGGCT,+,0.00) -85(CCGGGCGGGCGA,-,0.00) -25(GAGCGCGAGGCC,+,0.00) -86(GCCGGGCG,+,0.00),42(CCCGCGGC,-,0.00) 5(TAGCGACC,-,0.00) -100(TCCGCGCA,+,0.00),48(GCCGCGCA,+,0.00) -137(CGCAGGCGGCGC,-,0.00),-86(GCCGGGCGGGCG,+,0.00) -106(GGCGGCTCCGCG,-,0.00) -70(GCGGGGAAGC,+,0.00) 561_WT_peak_898 chr10 17068640 17069097 + 153 NA intron (NM_001081, intron 27 of 66) intron (NM_001081, intron 27 of 66) 102948 NM_001081 8029 Hs.166206 NM_001081 HPRD:04296 CUBN IFCR|MGA1|gp280 cubilin (intrinsic factor-cobalamin receptor) protein-coding 0.010941 0.441048 78(AGCCGCCT,-,0.00) 92(GTGCTGACAGGG,-,0.00) 561_WT_peak_5245 chr3 128444639 128445002 + 153 NA promoter-TSS (NM_004637) promoter-TSS (NM_004637) -159 NM_004637 7879 Hs.744853 NM_004637 HPRD:03805 RAB7A PRO2706|RAB7 RAB7A, member RAS oncogene family protein-coding 0.055096 0.538462 152(GGCGTCGA,-,0.00) -77(TTTACCCC,-,0.00) 561_WT_peak_3714 chr19 31705008 31705302 + 153 NA Intergenic Intergenic 135035 NM_020856 57616 Hs.278436 NM_020856 HPRD:18351 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding 0.027211 0.505085 80(CTGCGCCAGCCA,+,0.00) -139(CAAACCCG,+,0.00) -133(CGGGTAAG,+,0.00) 62(GCTGGGAAGC,+,0.00) 561_WT_peak_7108 chr8 109455711 109456282 + 153 NA intron (NM_014673, intron 1 of 10) CpG 143 NM_014673 9694 Hs.654351 NM_014673 HPRD:09657 EMC2 KIAA0103|TTC35 ER membrane protein complex subunit 2 protein-coding 0.080560 0.632867 269(CTGCCCTCCTCC,+,0.00) 215(TGGCCCGGACGC,+,0.00) 98(AAGCCGTT,+,0.00) -160(CCCCCTTCCCCG,+,0.00) 220(CGGACGCG,-,0.00),224(CGCGTACT,+,0.00) -27(TCCCCGCCCT,+,0.00) 115(CCGCTGCTTTCG,-,0.00),378(CGGAAGAGGCGG,+,0.00) -21(CCCTCTCACCCC,+,0.00) 369(TGGGCGGT,-,0.00) -138(CGCAGAGCCGCG,+,0.00) 300(GGGCCGCTTT,+,0.00) -118(CGTGGCGG,+,0.00) 92(GCTGGGAAGC,+,0.00) 561_WT_peak_1362 chr11 65270419 65270775 + 152 NA non-coding (NR_002819, exon 1 of 1) non-coding (NR_002819, exon 1 of 1) 5364 NR_002819 378938 Hs.621695 NR_002819 ENSG00000251562 MALAT1 HCN|LINC00047|MALAT-1|NCRNA00047|NEAT2|PRO2853|mascRNA metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) ncRNA 0.011236 0.397759 561_WT_peak_6672 chr7 55376625 55377044 + 152 NA Intergenic Intergenic -53506 NR_110426 102725541 Hs.590524 NR_110426 ELDR Fabl|LINC01156 EGFR long non-coding downstream RNA ncRNA 0.021480 0.514286 207(AGCCGCCA,-,0.00) 561_WT_peak_1579 chr12 9177532 9177979 + 152 NA Intergenic L2|LINE|L2 35534 NM_005810 10219 Hs.558446 NM_005810 HPRD:16076 KLRG1 2F1|CLEC15A|MAFA|MAFA-2F1|MAFA-L|MAFA-LIKE killer cell lectin-like receptor subfamily G, member 1 protein-coding 0.002237 0.379464 -109(AAGTGGTT,+,0.00) 150(CGGGTCAA,+,0.00) 561_WT_peak_3482 chr18 32869975 32870423 + 152 NA promoter-TSS (NR_024566) promoter-TSS (NR_024566) 10 NM_001288711 100101467 Hs.619840 NM_001112734 ENSG00000186814 ZSCAN30 ZNF-WYM|ZNF397OS|ZNF917 zinc finger and SCAN domain containing 30 protein-coding 0.066964 0.576837 92(CCGCCCTGCGCC,+,0.00) 59(CTCGGCAGCC,-,0.00) 89(CCCCCGCC,-,0.00) 104(TGCGCGGT,-,0.00) 187(GCTTCACAGC,-,0.00) 561_WT_peak_5803 chr5 71146748 71146931 + 152 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA 131849 NM_004291 9607 Hs.1707 NM_004291 HPRD:04006 CARTPT CART CART prepropeptide protein-coding 0.098361 0.663043 -98(AGGGCAGGGC,-,0.00) -36(CGGTTCTG,-,0.00) -41(CGTCGCGG,+,0.00) -97(GGGCAGGGCGCC,-,0.00) 561_WT_peak_3795 chr19 45681235 45681471 + 152 NA promoter-TSS (NM_212550) promoter-TSS (NM_212550) 148 NM_001270891 79090 Hs.466929 NM_024108 HPRD:14503 TRAPPC6A TRS33 trafficking protein particle complex 6A protein-coding 0.088983 0.679325 -37(CCGCTTCCTCCC,-,0.00) -104(GGGCCGGGTT,+,0.00) 561_WT_peak_4447 chr2 204571127 204571415 + 152 NA promoter-TSS (NM_006139) promoter-TSS (NM_006139) 73 NM_001243077 940 Hs.443123 NM_006139 HPRD:01727 CD28 Tp44 CD28 molecule protein-coding 0.031250 0.498270 561_WT_peak_4494 chr2 232526644 232527432 + 152 NA Intergenic CpG -46197 NM_002823 5757 Hs.459927 NM_002823 HPRD:01778 PTMA TMSA prothymosin, alpha protein-coding 0.119289 0.694550 113(CCACCCTGCGCC,+,0.00) 345(CTCGGCCGCT,-,0.00),382(CTCGCCCGCC,-,0.00) 173(AGGCCGCT,+,0.00) 265(GCGGGAACGCGC,-,0.00),448(CCCGGAAGCCGG,-,0.00) 442(TGGACGCC,+,0.00) -18(CGCGTGCG,+,0.00) -55(CCCCCGCC,-,0.00) 457(CGGCACAA,-,0.00) 405(CCGCGTCTCCCG,-,0.00) 252(CGTCGGAA,+,0.00) 502(CCTTCCGCTGCC,-,0.00) 16(CCCGCGCA,+,0.00),424(GGCGCGGC,-,0.00) 24(CCGGCGCCTGCG,+,0.00) 362(GGGCCGCCTT,+,0.00) 59(CGAGGCGG,+,0.00) 63(GCGGCCACGGCC,+,0.00),65(GGCCACGGCCGG,-,0.00) 399(GCTCCGCCGC,-,0.00) 561_WT_peak_1923 chr12 127650479 127650651 + 152 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA -105623 NR_104646 101927592 Hs.385663 NR_104646 ENSG00000249345 LOC101927592 - uncharacterized LOC101927592 ncRNA 0.122093 0.630058 -37(CCGCCTTTCCGG,+,0.00) -119(CCGACCCA,+,0.00) -26(GCCGCGCC,+,0.00) 561_WT_peak_5968 chr5 141531861 141532011 + 152 NA 3' UTR (NM_030571, exon 8 of 8) 3' UTR (NM_030571, exon 8 of 8) 43612 NM_030571 80762 Hs.9788 NM_030571 HPRD:14816 NDFIP1 N4WBP5 Nedd4 family interacting protein 1 protein-coding 0.006667 0.298013 -56(AAAACAGAAAGC,+,0.00) 561_WT_peak_4938 chr22 41681796 41682532 + 152 NA promoter-TSS (NM_002883) promoter-TSS (NM_002883) 91 NM_002883 5905 Hs.183800 NM_002883 HPRD:03839 RANGAP1 Fug1|RANGAP|SD Ran GTPase activating protein 1 protein-coding 0.101902 0.675712 -38(ACGCCCTCCTCG,+,0.00),242(GGAGGAGGAGGA,-,0.00),434(CCGCCCTCCTCT,+,0.00) -101(CTCGGCCGTC,-,0.00) -97(GCCGTCGA,-,0.00),294(TCGAGGCC,+,0.00) 1(CGGGGAAA,+,0.00),339(CGGGTAGA,+,0.00) 39(GCGGCGCCGCCG,+,0.00),314(CCCTCGCCCCGC,-,0.00) 69(CGCGCCTCCGCC,-,0.00) -44(GGCGCCACGCCC,+,0.00) 42(GCGCCGCCGC,-,0.00) 561_WT_peak_768 chr1 228645288 228645554 + 152 NA promoter-TSS (NM_175055) promoter-TSS (NM_175055) 139 NM_033445 92815 Hs.26331 NM_033445 HPRD:13660 HIST3H2A - histone cluster 3, H2a protein-coding 0.142857 0.659176 -144(CCGCGTTGCCGG,+,0.00) -79(GGGGCGCCGGCG,+,0.00) -147(GCGCCGCGTT,+,0.00),-26(CACGCGGCCC,-,0.00) 561_WT_peak_5574 chr4 107237734 107237974 + 151 NA promoter-TSS (NM_001163437) promoter-TSS (NM_001163437) 7 NM_001163436 93627 Hs.151498 NM_033115 HPRD:17514 TBCK TBCKL TBC1 domain containing kinase protein-coding 0.058333 0.556017 -136(TCGTGGCG,+,0.00) 2(GAAACAGGAAAG,+,0.00) -135(CGTGGCGG,+,0.00) 561_WT_peak_3229 chr17 46618951 46619223 + 151 NA TTS (NM_002145) TTS (NM_002145) -2626 NR_102279 100874362 Hs.171806 NR_102279 ENSG00000230148 HOXB-AS1 - HOXB cluster antisense RNA 1 ncRNA 0.069853 0.633700 51(CCCCCCCCCCGG,+,0.00) -59(TCCCTGGCCT,+,0.00) -21(GGCGGGGG,+,0.00),56(CCCCCGGC,-,0.00),68(CGCCCGGC,-,0.00) -67(CCCCTTCTTCCC,-,0.00),36(CAGCTTCTTCCC,-,0.00) -4(GCTGGGCCGGCG,+,0.00),71(CCGGCCCCAGCG,+,0.00) 22(TGTCATGGCGGC,-,0.00) 561_WT_peak_2837 chr16 48644205 48644636 + 151 NA promoter-TSS (NM_153029) promoter-TSS (NM_153029) -300 NM_153029 9683 Hs.511839 NM_153029 HPRD:08109 N4BP1 - NEDD4 binding protein 1 protein-coding 0.025522 0.437500 -80(AACCGCTT,-,0.00) -119(TGGTTTTG,-,0.00) -104(GGGCGGACTT,+,0.00) 561_WT_peak_6779 chr7 100167693 100168121 + 151 NA Intergenic CpG 3363 NM_001168682 100316904 Hs.633863 NM_001168682 ENSG00000205307 SAP25 - Sin3A-associated protein, 25kDa protein-coding 0.121495 0.727273 82(GCGCGCCAGCAC,+,0.00) -120(AGAGCCGGGA,-,0.00) 13(GCGTGCCG,+,0.00) -56(CGGTTCTG,-,0.00) -134(CGGCGGCCCCGG,-,0.00),24(GCGGCTCCAGCG,+,0.00) 132(CGTGGCGG,+,0.00),147(CGAGGCGG,+,0.00) -107(GCCGCCGTGCCC,+,0.00) 561_WT_peak_3984 chr2 25194219 25194516 + 151 NA promoter-TSS (NR_034113) promoter-TSS (NR_034113) 596 NM_016544 51277 Hs.434993 NM_016544 HPRD:15221 DNAJC27 RBJ|RabJS DnaJ (Hsp40) homolog, subfamily C, member 27 protein-coding 0.074074 0.617450 5(GGCCGACG,-,0.00),102(CGTCGGAG,+,0.00) -87(CCGCCGGCTCCC,-,0.00) -78(CCCAGGCCCGGC,-,0.00) -76(CAGGCCCGGCTG,+,0.00) 561_WT_peak_4784 chr21 36089711 36090007 + 151 NA 3' UTR (NM_053277, exon 6 of 6) 3' UTR (NM_053277, exon 6 of 6) 19620 NR_024351 54064 Hs.436868 NR_024351 ENSG00000230978 LINC00160 C21orf52|NCRNA00160 long intergenic non-protein coding RNA 160 ncRNA 0.006757 0.478114 64(GGCGTGGA,-,0.00) -78(CTGGTAAA,+,0.00) 561_WT_peak_4624 chr20 35724170 35724654 + 151 NA promoter-TSS (NM_002895) promoter-TSS (NM_002895) -9 NM_183404 5933 Hs.207745 NM_002895 HPRD:00312 RBL1 CP107|PRB1|p107 retinoblastoma-like 1 protein-coding 0.084711 0.645361 -63(GCGCCTCCCCGG,+,0.00) 19(CGCGCCACGGCC,+,0.00) 561_WT_peak_619 chr1 172502149 172502766 + 151 NA exon (NM_016227, exon 2 of 23) exon (NM_016227, exon 2 of 23) 199 NM_001282750 51430 Hs.204559 NM_014283 HPRD:12732 SUCO C1orf9|CH1|OPT|SLP1 SUN domain containing ossification factor protein-coding 0.082658 0.674757 40(GTCCCCGGAGTC,+,0.00) -11(TGGCGGCT,+,0.00),208(TGGCGGCT,+,0.00) -42(CCCGGCGGGCGG,-,0.00) 7(GGCGTGGA,-,0.00) -87(CGAGTACG,+,0.00),-85(AGTACGCG,-,0.00) -44(CCCCCGGC,-,0.00) 245(GGGAAGAAGGAG,+,0.00) 63(CCCTGTCCGCGC,-,0.00) -119(CGCGGCCCCGCC,-,0.00) 333(CCGCGACG,-,0.00) 98(CTGCCAGGACGC,-,0.00) 561_WT_peak_2931 chr16 85063022 85063297 + 151 NA intron (NM_001286566, intron 1 of 11) intron (NM_001286566, intron 1 of 11) 1802 NM_001286566 9764 Hs.301658 NM_014732 HPRD:17192 KIAA0513 - KIAA0513 protein-coding 0.014545 0.449275 53(CCCACCTCCTCC,+,0.00) -87(ATGTGGCT,+,0.00) 561_WT_peak_4983 chr3 4344882 4345190 + 151 NA promoter-TSS (NM_001276325) promoter-TSS (NM_001276325) 48 NM_001243723 6419 Hs.475300 NM_006515 HPRD:10225 SETMAR HsMar1|METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding 0.081169 0.631068 98(CGCGTGCG,+,0.00) 78(CCGACTGA,+,0.00) -164(CAAAACGG,+,0.00) 2(CGGGTAAA,+,0.00) 561_WT_peak_3890 chr19 54618637 54619188 + 151 NA 5' UTR (NM_013342, exon 1 of 6) 5' UTR (NM_013342, exon 1 of 6) 122 NM_015629 26121 Hs.515598 NM_015629 HPRD:05917 PRPF31 NY-BR-99|PRP31|RP11|SNRNP61 pre-mRNA processing factor 31 protein-coding 0.081670 0.581522 -92(AAGCCGTT,+,0.00),337(AGCGACTA,-,0.00) 116(TCGACGCC,+,0.00) 310(CGGCGCGA,-,0.00) -9(GTTTCCTGTTTC,-,0.00) 361(TGCGCGGA,-,0.00) 215(CCGCCTAG,-,0.00) -61(GCTCAGCAGC,-,0.00) 561_WT_peak_5563 chr4 102448448 102448641 + 151 NA Intergenic L2|LINE|L2 179610 NR_033874 90024 Hs.534513 NR_033874 ENSG00000254531 FLJ20021 - uncharacterized LOC90024 ncRNA 0.005181 0.453608 561_WT_peak_6754 chr7 92778166 92778422 + 151 NA promoter-TSS (NM_152703) promoter-TSS (NM_152703) -614 NM_152703 219285 Hs.489118 NM_152703 HPRD:10798 SAMD9L C7orf6|DRIF2|UEF1 sterile alpha motif domain containing 9-like protein-coding 0.011719 0.439689 561_WT_peak_3647 chr19 13957201 13958637 + 151 NA Intergenic Intergenic -10446 NR_029495 407010 NR_029495 miRBase:MI0000079 MIR23A MIRN23A|hsa-mir-23a|miRNA23A microRNA 23a ncRNA 0.039694 0.641614 761(GATTTCGGGCCC,-,0.00),1121(GGGACCGGAGGC,+,0.00) 1168(CCCCGCTCCCGG,+,0.00) 767(GGGCCCCAGCCC,+,0.00) 170(CCCCCGGC,-,0.00) 156(TCCTCCCAGCCC,+,0.00),415(GGGCAGAGAGGT,-,0.00),918(CCCTCTTACCCC,+,0.00),976(CCCTCCCTGCCC,+,0.00) 129(GTCCCACG,-,0.00) -119(CAGTTTTG,-,0.00) 842(CGGGTTAA,+,0.00),870(CGGGTAAA,+,0.00) 861(GGCAGCCGACGG,+,0.00) 213(GCCTCCTGTTGC,-,0.00) 535(GCCTGGCCCAGC,-,0.00),893(GCGGGGCCGGCG,+,0.00) 673(CCTGCCTGGCTG,+,0.00),1039(CAGCGAGGCCAC,-,0.00),1230(CTGGCGGGCCGC,-,0.00) 561_WT_peak_6616 chr7 23571044 23571489 + 151 NA intron (NM_001282758, intron 1 of 8) CpG-24104 394 NM_001282758 29896 Hs.445652 NM_013293 HPRD:04096 TRA2A AWMS1|HSU53209 transformer 2 alpha homolog (Drosophila) protein-coding 0.069663 0.621076 122(CCGCCCGA,+,0.00),126(CCGACCGC,+,0.00) 181(CCCGCGGC,-,0.00) -51(GGGCGGGGAGGG,-,0.00) 185(CGGCTTTG,-,0.00) -55(GCGGGGGCGGGG,+,0.00) 118(AACCCCGCCC,-,0.00) -126(CCGCGACG,-,0.00),167(CCGCCTAG,-,0.00) 561_WT_peak_5744 chr5 52856391 52856743 + 151 NA exon (NM_002495, exon 1 of 5) exon (NM_002495, exon 1 of 5) 102 NM_002495 4724 Hs.528222 NM_002495 HPRD:04073 NDUFS4 AQDQ|CI-18 NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) protein-coding 0.053977 0.546742 163(TCGGGCGG,-,0.00) 561_WT_peak_6499 chr6 143771392 143772006 + 151 NA promoter-TSS (NM_003630) promoter-TSS (NM_003630) 142 NM_182503 134637 Hs.709561 NM_182503 ADAT2 DEADC1|TAD2|dJ20N2|dJ20N2.1 adenosine deaminase, tRNA-specific 2 protein-coding 0.071661 0.593496 276(GGAGGAGCGCGG,-,0.00) 265(CCCGCGGC,-,0.00) 377(TGTCGGAC,+,0.00) 227(CCTTCGCCTCCA,-,0.00) 402(TGCGCGGC,-,0.00) 282(GCGCGGGCAGCG,+,0.00),405(GCGGCGGCAGCG,+,0.00) 396(GGCGGCTGCGCG,-,0.00) 375(CTTGTCGG,+,0.00) 223(GCCGCCTTCGCC,+,0.00) 400(GCTGCGCGGC,+,0.00) 561_WT_peak_5234 chr3 123304106 123304764 + 151 NA promoter-TSS (NM_198402) promoter-TSS (NM_198402) 75 NR_121654 100506826 Hs.556600 NR_038266 ENSG00000239523 MYLK-AS1 - MYLK antisense RNA 1 ncRNA 0.041033 0.525038 236(GGCGGCCTAG,+,0.00) -141(TCGGCGCC,+,0.00) -63(CCTCGCTA,+,0.00) 358(CGGCTGAGAGTG,-,0.00) 561_WT_peak_5159 chr3 75690256 75690541 + 150 NA Intergenic Intergenic 10484 NR_031714 100302212 NR_031714 miRBase:MI0006657 MIR1324 MIRN1324|hsa-mir-1324 microRNA 1324 ncRNA 0.042105 0.576923 -62(TCCCAGCCCT,+,0.00) -65(CACTCCCAGCCC,+,0.00) -109(TCCGCGCA,+,0.00) -115(CGAGGTTCCGCG,-,0.00) 561_WT_peak_489 chr1 149577374 149577786 + 150 NA intron (NR_111955, intron 1 of 1) intron (NR_111955, intron 1 of 1) 1113 NR_024511 728855 Hs.456578 NR_024510 ENSG00000235398 LINC00623 CH17-118O6.2 long intergenic non-protein coding RNA 623 ncRNA 0.053398 0.566586 -43(CCTCCCGCCCGG,+,0.00) -63(TCGCCGCC,+,0.00) -134(GCCGGGGG,+,0.00),-38(CGCCCGGC,-,0.00) 56(ACTTTCTGTTTC,-,0.00) -77(TGCGCGGA,-,0.00) -157(TGCCATGGCACC,-,0.00) -127(GCGGCCTGCCGC,+,0.00),-34(CGGCCAGGCCTC,-,0.00) 561_WT_peak_2110 chr13 115046617 115047028 + 150 NA promoter-TSS (NM_080687) promoter-TSS (NM_080687) -237 NM_080687 65110 Hs.533855 NM_023011 HPRD:09274 UPF3A HUPF3A|RENT3A|UPF3 UPF3 regulator of nonsense transcripts homolog A (yeast) protein-coding 0.102190 0.689320 98(GCTTCCGGGGCC,-,0.00) 119(CGCGGCCGCC,-,0.00) 236(CCGACCGC,+,0.00) 32(GGGATGGGAGGG,-,0.00) 80(CAAAGCCG,+,0.00),113(CTAAACCG,+,0.00) 227(TGGGCGGC,-,0.00) 86(CGCCGGCGCCCC,-,0.00) 196(CCGACTAG,-,0.00) 561_WT_peak_3202 chr17 43138520 43138901 + 150 NA promoter-TSS (NM_021079) promoter-TSS (NM_021079) 30 NM_021079 4836 Hs.532790 NM_021079 HPRD:01187 NMT1 NMT N-myristoyltransferase 1 protein-coding 0.065617 0.589005 16(GGCGGACGAG,+,0.00) -73(CAAAACCC,+,0.00) -13(CGCGGAGCCCTG,+,0.00) 561_WT_peak_1413 chr11 74660206 74660628 + 150 NA promoter-TSS (NM_001270381) promoter-TSS (NM_001270381) 125 NM_014752 9789 Hs.282700 NM_014752 HPRD:15435 SPCS2 - signal peptidase complex subunit 2 homolog (S. cerevisiae) protein-coding 0.068720 0.617021 -88(AATCGGCT,+,0.00),56(TAGCGGCT,+,0.00),57(AGCGGCTT,-,0.00),81(AGCCGGTT,-,0.00) 123(GGCGGCGA,-,0.00) -67(AGGGGAGGGA,-,0.00) -16(CGGGAGAAGCGG,+,0.00) 561_WT_peak_7552 chrX 53254121 53254400 + 150 NA 5' UTR (NM_001146702, exon 1 of 24) 5' UTR (NM_001146702, exon 1 of 24) 344 NM_001282622 8242 Hs.631768 NM_004187 HPRD:02442 KDM5C DXS1272E|JARID1C|MRX13|MRXJ|MRXSCJ|MRXSJ|SMCX|XE169 lysine (K)-specific demethylase 5C protein-coding 0.096774 0.660714 -15(TCGTCCCG,+,0.00) 79(CGCCGCCGCCGC,-,0.00) -154(GCGCCGCCGC,-,0.00),78(GCGCCGCCGC,-,0.00) 561_WT_peak_5017 chr3 14692793 14693145 + 150 NA promoter-TSS (NM_016474) promoter-TSS (NM_016474) -284 NM_016474 51244 Hs.517820 NM_016474 HPRD:12820 CCDC174 C3orf19 coiled-coil domain containing 174 protein-coding 0.051136 0.478754 -53(TCTTCCGGTCCT,-,0.00) 65(GGCGTCCA,-,0.00) -131(CTCGTACG,+,0.00),-129(CGTACGCT,-,0.00) -26(CCGAGACG,-,0.00) 561_WT_peak_4941 chr22 41865056 41865445 + 150 NA promoter-TSS (NM_032758) promoter-TSS (NM_032758) 121 NM_001098 50 Hs.643610 NM_001098 HPRD:00012 ACO2 ACONM|ICRD aconitase 2, mitochondrial protein-coding 0.077121 0.669231 205(GGCGGCCGGG,+,0.00) 88(CGGTTGTG,-,0.00) 211(CGGGTGAA,+,0.00) 45(CGAGGCGG,+,0.00) 561_WT_peak_4940 chr22 41842789 41843146 + 150 NA promoter-TSS (NM_016272) promoter-TSS (NM_016272) 60 NM_016272 10766 Hs.474978 NM_016272 HPRD:09583 TOB2 TOB4|TOBL|TROB2 transducer of ERBB2, 2 protein-coding 0.092437 0.681564 -162(CGGCCCGAAGTG,+,0.00) 167(AGGGCCGGGG,-,0.00) -162(CGGCCCGA,-,0.00) 56(CCCCGTCTTCCC,-,0.00) 47(CGTCCGGCTCCC,-,0.00) 82(GCCGCGCC,+,0.00) -58(GCGGGGCCAGGG,+,0.00) 6(CGCGGAGCAGCT,+,0.00) -56(GGGGCCAGGGCC,+,0.00) -27(CAGCCAGCCCCG,-,0.00) 561_WT_peak_4482 chr2 224821936 224822346 + 150 NA promoter-TSS (NM_022915) promoter-TSS (NM_022915) 20 NM_022915 65080 Hs.203559 NM_022915 HPRD:14763 MRPL44 COXPD16|L44MT|MRP-L44 mitochondrial ribosomal protein L44 protein-coding 0.092683 0.642336 164(CCCTCCGGTTCG,-,0.00) 4(CCGCGTTCCGGG,+,0.00) 225(GAGCGGCAGCGC,+,0.00) 58(TCGTTCCG,+,0.00) 202(CCTTCCGCTTCC,-,0.00) -71(GGCTGTCTCCGC,-,0.00),-28(GGCTGTCTCCGC,-,0.00) 93(GCGTCCGGGCTG,+,0.00) 561_WT_peak_2116 chr14 21149642 21149996 + 150 NA Intergenic Intergenic -2517 NM_001145 283 Hs.283749 NM_001145 HPRD:00105 ANG ALS9|HEL168|RAA1|RNASE4|RNASE5 angiogenin, ribonuclease, RNase A family, 5 protein-coding 0.022599 0.461972 -91(TGAACCGAATTC,+,0.00) 20(AGGAAGAGGCGG,+,0.00) 561_WT_peak_3577 chr19 3185370 3185935 + 150 NA promoter-TSS (NM_020170) promoter-TSS (NM_020170) -223 NM_020170 56926 Hs.657032 NM_020170 HPRD:07126 NCLN NET59 nicalin protein-coding 0.067257 0.549470 228(CCGCACCTTCCG,-,0.00) 283(CGCCGGAC,+,0.00) -146(CAAAACAG,+,0.00) 269(CAGGGCTCCGCG,-,0.00) 561_WT_peak_7281 chr9 69065077 69065606 + 150 NA Intergenic CpG 82513 NR_002836 595135 Hs.571593 NR_002836 ENSG00000227558 PGM5P2 - phosphoglucomutase 5 pseudogene 2 pseudo 0.090737 0.666038 1(AGCCGCTT,-,0.00),181(AGACACCT,-,0.00),202(AGCCGCCA,-,0.00) 10(CCGCCCCCACGG,+,0.00),62(CAGCGTGCCCGG,+,0.00) -57(CGCGCACG,+,0.00) 102(TCGGGCGG,-,0.00) 334(TCCCCGCCCT,+,0.00) 128(AGGCACGA,-,0.00) 25(CGTCGCCA,+,0.00) -59(CCCGCGCA,+,0.00) 203(GCCGCCATAGCT,+,0.00) -29(GCGCCGCCGC,-,0.00),212(GCTCCCCAGC,-,0.00) 561_WT_peak_108 chr1 24969774 24970279 + 150 NA intron (NM_005839, intron 1 of 16) CpG 432 NM_005839 10250 Hs.18192 NM_005839 HPRD:10441 SRRM1 160-KD|POP101|SRM160 serine/arginine repetitive matrix 1 protein-coding 0.093069 0.685771 214(GCCGCCGGGTCC,-,0.00) 116(GGCGGCGA,-,0.00) -102(CGCGTAAG,+,0.00),109(CCTACGCG,-,0.00) -137(CCGAGCGA,+,0.00) -71(AGGCCAGGGA,-,0.00),150(TGGGCCGGGA,-,0.00),301(AGGGCAGGGA,-,0.00) -87(GCCGGGCG,+,0.00) -127(CGGCAAGA,-,0.00),210(GCGTGCCG,+,0.00) 236(CGGAGCCGGAGG,+,0.00) 79(TGCGCAGT,-,0.00) 185(GCGGGGCCTGCA,+,0.00),235(GCGGAGCCGGAG,+,0.00) -132(CGAGGCGG,+,0.00),-61(CTTCTCGG,+,0.00),110(CTACGCGG,+,0.00) 561_WT_peak_6391 chr6 89790284 89790758 + 150 NA promoter-TSS (NM_006813) promoter-TSS (NM_006813) 92 NM_006813 10957 Hs.75969 NM_006813 HPRD:08412 PNRC1 B4-2|PNAS-145|PROL2|PRR2 proline-rich nuclear receptor coactivator 1 protein-coding 0.084388 0.631579 87(TCGCCGCC,+,0.00) -37(GGGCGGGCGCGG,-,0.00) 37(CCGCCCGA,+,0.00) -115(TCTACCCG,-,0.00),288(TTTACCCC,-,0.00) -96(GCGGAGCGAGGG,+,0.00) 273(CACGGCTCCGCC,-,0.00) -26(GGGCGGAGCT,+,0.00) 212(GCCGCCTTGCGC,+,0.00) -105(GCTGCGGAGG,+,0.00),25(GCTGCGCCGC,+,0.00),25(GCTGCGCCGC,-,0.00) 561_WT_peak_3048 chr17 15862543 15862856 + 150 NA intron (NM_000676, intron 1 of 1) L1MC4|LINE|L1 14468 NM_000676 136 Hs.167046 NM_000676 HPRD:15971 ADORA2B ADORA2 adenosine A2b receptor protein-coding 0.003195 0.312102 561_WT_peak_5773 chr5 64859042 64859438 + 150 NA promoter-TSS (NM_022145) promoter-TSS (NM_022145) 174 NM_001278929 23398 Hs.121432 NM_015342 HPRD:11063 PPWD1 - peptidylprolyl isomerase domain and WD repeat containing 1 protein-coding 0.070707 0.561713 -156(TCGCTCGG,-,0.00) 147(CGGGACGA,-,0.00) 90(TTTACCTG,-,0.00) -19(GGGACCCGGAGG,+,0.00) -72(CAACATGGCGGC,-,0.00) 561_WT_peak_2487 chr15 52860864 52861388 + 150 NA promoter-TSS (NM_006628) promoter-TSS (NM_006628) 87 NM_006628 10776 Hs.512908 NM_006628 HPRD:09264 ARPP19 ARPP-16|ARPP-19|ARPP16|ENSAL cAMP-regulated phosphoprotein, 19kDa protein-coding 0.118321 0.716190 108(GGTGGCCGAG,+,0.00),122(CCCGGCCGCC,-,0.00) 291(CCGCTTCTCCCG,-,0.00) -137(CAGCGACG,-,0.00) 87(CGGGAAAA,+,0.00) -126(GGAAGCCAAAGG,+,0.00),16(CCTTCTGCTCCT,-,0.00) -68(GGCGCGGC,-,0.00) -86(CCTCGGCCCCGC,-,0.00),-3(CTCACGCCCCGC,-,0.00),147(CCCAGGGCCCGC,-,0.00) 202(CACGGAGCCGCG,+,0.00) -68(GGCGCGGCCC,-,0.00) 155(CCGCCGGGCCGC,-,0.00) 561_WT_peak_1902 chr12 122326672 122327143 + 150 NA promoter-TSS (NM_001171993) promoter-TSS (NM_001171993) 270 NM_002813 5715 Hs.131151 NM_002813 HPRD:04394 PSMD9 Rpn4|p27 proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 protein-coding 0.089172 0.639831 102(CGGCCCGGAGTC,+,0.00) -114(CCCGGGAGCCGG,-,0.00) -128(GGCGTCGT,-,0.00),-28(GGCGTCGT,-,0.00) 202(TCTGTCGG,-,0.00) 207(CGGCACAA,-,0.00) -123(CGTCCCTA,+,0.00),-14(CAGCGACG,-,0.00) -71(GTCCGACG,-,0.00) -156(GGGCGGAGCC,+,0.00),98(AACCCGGCCC,-,0.00) 129(TGCCAGGGCGGC,-,0.00),178(GCCCAAGGCGCC,-,0.00) 561_WT_peak_5241 chr3 127391112 127391622 + 150 NA promoter-TSS (NM_172027) promoter-TSS (NM_172027) -414 NM_032548 80325 Hs.107812 NM_032548 HPRD:10513 ABTB1 BPOZ|BTB3|BTBD21|EF1ABP ankyrin repeat and BTB (POZ) domain containing 1 protein-coding 0.123529 0.745597 58(GGCGCAGGCCGA,-,0.00) 110(CGGCCCGGAGCC,+,0.00) 147(CCGCCCCCGCGG,+,0.00),176(GCTCCTTCCCGC,+,0.00),268(CCGCTTTCCCGC,+,0.00) 121(CCGCACCAGCCC,+,0.00),157(GGCCTGGCCCTC,-,0.00) 232(CCGCCCGA,+,0.00) 274(TCCCGCCCCT,+,0.00) 152(CCCGCGGC,-,0.00) 184(CCGCTTCCCCCG,-,0.00) 210(CTTCGGAC,+,0.00) 145(GGCCGCCCCCGC,-,0.00),260(CCTTGGCCCCGC,-,0.00),287(CCCCGGCCCCGC,-,0.00) -157(CGAGGAGCTGCG,+,0.00),288(CCCGGCCCCGCG,-,0.00) 306(GGGCGGCGCT,+,0.00) 74(GCCGCCAGGACC,+,0.00),256(CCCGCCTTGGCC,+,0.00) -53(GCGGCGGGGC,+,0.00),-26(GCTGGGGGGC,+,0.00) 155(GCGGCCTGGCCC,+,0.00) 561_WT_peak_6296 chr6 33538598 33539139 + 150 NA Intergenic Intergenic 9202 NM_001188 578 Hs.485139 NM_001188 HPRD:02744 BAK1 BAK|BAK-LIKE|BCL2L7|CDN1 BCL2-antagonist/killer 1 protein-coding 0.044362 0.555351 152(CCGACCTA,+,0.00) 126(TCCTCGCAGCCC,+,0.00) 150(GTCCGACC,-,0.00) 561_WT_peak_4228 chr2 98329927 98330264 + 150 NA promoter-TSS (NM_001079) promoter-TSS (NM_001079) 64 NM_001079 7535 Hs.234569 NM_001079 HPRD:01495 ZAP70 SRK|STCD|STD|TZK|ZAP-70 zeta-chain (TCR) associated protein kinase 70kDa protein-coding 0.023739 0.603550 -9(CCTTCCGGGCAG,-,0.00) 49(AAGCGGCT,+,0.00) 83(GCCACCAGGGCC,+,0.00) 561_WT_peak_1685 chr12 49582144 49582353 + 150 NA 5' UTR (NM_001270399, exon 1 of 4) 5' UTR (NM_001270399, exon 1 of 4) 859 NM_001270399 7846 Hs.654422 NM_006009 HPRD:03959 TUBA1A B-ALPHA-1|LIS3|TUBA3 tubulin, alpha 1a protein-coding 0.081340 0.652381 -133(GCCGGGGG,+,0.00) -104(TTTTCCCG,-,0.00) 561_WT_peak_6608 chr7 21467634 21467923 + 150 NA promoter-TSS (NM_003112) promoter-TSS (NM_003112) 89 NM_003112 6671 Hs.88013 NM_003112 HPRD:02764 SP4 HF1B|SPR-1 Sp4 transcription factor protein-coding 0.096886 0.682759 -26(GCGGGCGGGCGG,-,0.00) 109(TCGCCGCC,+,0.00) -124(TCGGGCGG,-,0.00) -8(CCTCTCCTCCCG,-,0.00) -122(GGGCGGAGAGAG,-,0.00) 1(CCGCCTCG,-,0.00) -161(GCGCCGCCGC,-,0.00),106(CCTTCGCCGC,-,0.00) 561_WT_peak_6545 chr6 159483596 159483867 + 149 NA Intergenic Intergenic -17547 NM_054114 117289 Hs.529984 NM_054114 HPRD:18143 TAGAP ARHGAP47|IDDM21|TAGAP1 T-cell activation RhoGTPase activating protein protein-coding 0.011070 0.415441 561_WT_peak_6473 chr6 131949243 131949610 + 149 NA promoter-TSS (NM_001270521) promoter-TSS (NM_001270521) -47 NM_015979 9439 Hs.29679 NM_004830 HPRD:05436 MED23 ARC130|CRSP130|CRSP133|CRSP3|DRIP130|MRT18|SUR-2|SUR2 mediator complex subunit 23 protein-coding 0.089918 0.649457 47(GGAGAAGGGCGG,-,0.00) -104(GGCGTCGC,-,0.00) -13(GGTACGCG,-,0.00) -102(CGTCGCTT,+,0.00) -81(TTTACCTG,-,0.00) 161(GCTTCCTGTTCG,-,0.00) 561_WT_peak_379 chr1 111758436 111759034 + 149 NA Intergenic Intergenic -11546 NM_004000 1117 Hs.514840 NM_004000 HPRD:03315 CHI3L2 CHIL2|YKL-39|YKL39 chitinase 3-like 2 protein-coding 0.011706 0.489149 171(AGAGGCCT,-,0.00) 561_WT_peak_7198 chr9 272453 272716 + 149 NA promoter-TSS (NM_001190458) promoter-TSS (NM_001190458) -464 NM_001190458 81704 Hs.132599 NM_203447 HPRD:10920 DOCK8 HEL-205|MRD2|ZIR8 dedicator of cytokinesis 8 protein-coding 0.015209 0.526515 561_WT_peak_502 chr1 149870998 149871320 + 149 NA promoter-TSS (NM_016074) promoter-TSS (NM_016074) 4 NM_016074 51027 Hs.13880 NM_016074 HPRD:13036 BOLA1 - bolA family member 1 protein-coding 0.055901 0.613003 75(GTCTCCGGGGCT,-,0.00) 1(GCTCCGGAGC,+,0.00),1(GCTCCGGAGC,-,0.00) 561_WT_peak_6999 chr8 42128807 42129439 + 149 NA intron (NM_001190720, intron 1 of 20) CpG 303 NR_033819 3551 Hs.597664 NM_001556 HPRD:04462 IKBKB IKK-beta|IKK2|IKKB|IMD15|NFKBIKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta protein-coding 0.072785 0.655608 431(GGGGGAGGGTGA,-,0.00) 81(AGGCCCGGAAGA,+,0.00) -36(CCGCCTTCCCCG,+,0.00),-22(CCGGGGAGCCCG,-,0.00) -47(CCGCCCCAGCCC,+,0.00) 319(AGGCCCGGGC,-,0.00) -120(TCGCGCCG,+,0.00) 356(CCTCGCTA,+,0.00) 436(AGGGTGAGAGGG,-,0.00) -56(CGGGTTTG,-,0.00) -9(CCCCTGCCCCGC,-,0.00),53(TGCAGGCCCCGC,-,0.00) 58(GCCCCGCCGC,-,0.00),66(GCCCCGCTGC,-,0.00) 36(GCGGCCCGGGTG,+,0.00) 561_WT_peak_974 chr10 43048233 43048524 + 149 NA promoter-TSS (NR_026777) promoter-TSS (NR_026777) -60 NR_026777 100129482 Hs.278064 NR_026777 ENSG00000234420 ZNF37BP KOX21|ZNF37B zinc finger protein 37B, pseudogene pseudo 0.079038 0.551370 -115(AAGCGGCT,+,0.00) -61(TCGCGCCG,+,0.00),-15(TCGCGCCG,+,0.00),31(TCGCGCCG,+,0.00) -140(ACCGCGCA,+,0.00) -18(CCCTCGCGCCGC,-,0.00) -116(AAAGCGGCTC,-,0.00) 561_WT_peak_5291 chr3 151986336 151987289 + 149 NA non-coding (NR_027038, exon 2 of 2) non-coding (NR_027038, exon 2 of 2) 603 NR_027038 401093 Hs.725347 NR_027037 ENSG00000229619 MBNL1-AS1 - MBNL1 antisense RNA 1 ncRNA 0.100735 0.659329 -88(GGAGGCCGAG,+,0.00) 205(AGCGACAT,-,0.00) 45(GCGGGAGGGCGC,-,0.00),543(CCTCCTGCCCGG,+,0.00),553(GGGGGAAGGCGG,-,0.00) -36(TCGGCGCC,+,0.00),83(TCGCCGCC,+,0.00) 635(CGCGCACG,+,0.00) 500(AGGGGCGGGC,-,0.00) 145(GGCGGGGG,+,0.00),600(GCCGCGGG,+,0.00) 135(GGGCTGGGCGGG,-,0.00) 402(TTTCCCCG,-,0.00) -20(ACCGCCCA,+,0.00),157(GCCGCGCA,+,0.00),633(CCCGCGCA,+,0.00) -61(CGCGGGCTCCGG,-,0.00),477(CGCCGGCCGCGG,-,0.00) 294(CGTCGCGG,+,0.00) 157(GCCGCGCAGC,-,0.00),643(GCTTGGCAGC,-,0.00) 561_WT_peak_5571 chr4 103997281 103997926 + 149 NA 5' UTR (NM_178833, exon 1 of 12) 5' UTR (NM_178833, exon 1 of 12) 327 NM_178833 133308 Hs.546482 NM_178833 HPRD:14051 SLC9B2 NHA2|NHE10|NHEDC2 solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2 protein-coding 0.113178 0.695046 -40(GGCGGCGGAG,+,0.00) 140(TCGGCGCC,+,0.00),452(GGCGCCGA,-,0.00) -154(CCGCTGGCGCTG,-,0.00),189(CAGCGGCAGCCC,+,0.00) 248(CGCGTGCG,+,0.00) -53(GGGCTGTGGGGG,-,0.00) 130(GTCCGACC,-,0.00),225(GTCCGGCG,-,0.00) -134(TTTACCCT,-,0.00) 63(GGCGCGGC,-,0.00),117(ACCGCGCA,+,0.00) 65(CGCGGCACCGCG,+,0.00),65(CGCGGCACCGCG,-,0.00),240(TGCAGAGCCGCG,+,0.00),329(AGCGGCACCGCG,-,0.00) -39(GCGGCGGAGC,+,0.00) 561_WT_peak_1480 chr11 110045000 110045198 + 149 NA TTS (NM_001260493) TTS (NM_001260493) 81012 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding 0.060606 0.562814 -70(CTGACCGA,+,0.00) -158(CGTCACTA,+,0.00) 561_WT_peak_2475 chr15 49447380 49448084 + 149 NA promoter-TSS (NR_036507) promoter-TSS (NR_036507) 122 NM_001143887 9318 Hs.369614 NM_004236 HPRD:05146 COPS2 ALIEN|CSN2|SGN2|TRIP15 COP9 signalosome subunit 2 protein-coding 0.068182 0.614184 -148(AGGCGGCT,+,0.00),428(AAGTGGTT,+,0.00) 24(GCGGGAACGGGG,-,0.00),237(CCGGGAGGGGGA,-,0.00) 499(GGCGTCGG,-,0.00) 103(GCCGCGGG,+,0.00) 347(TCCTGCCG,+,0.00) 416(CCGTTTCCTCCG,-,0.00) 501(CGTCGGAA,+,0.00) -86(CGTGTAAA,+,0.00) 284(CGCGGCTCAGAG,-,0.00) -150(CGAGGCGG,+,0.00) 561_WT_peak_6753 chr7 92533704 92533991 + 149 NA intron (NR_110087, intron 2 of 2) AmnSINE1|SINE|Deu -67906 NM_001145306 1021 Hs.119882 NM_001259 HPRD:04533 CDK6 PLSTIRE cyclin-dependent kinase 6 protein-coding 0.006969 0.465278 -37(AGCCACAT,-,0.00) -79(GAAGCGGCCC,-,0.00) 561_WT_peak_7091 chr8 101963662 101964445 + 149 NA promoter-TSS (NM_001135701) promoter-TSS (NM_001135701) 304 NM_145690 7534 Hs.492407 NM_003406 HPRD:03183 YWHAZ 14-3-3-zeta|HEL-S-3|HEL4|KCIP-1|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta protein-coding 0.127714 0.735969 126(GGAGCCGGAGGC,+,0.00),485(AGCCCCGGCAGC,+,0.00) 313(GGCGGCCGGG,+,0.00) -79(GGCGGCGA,-,0.00),97(TCGGCGCC,+,0.00),107(GGCGTCGA,-,0.00) 271(CGCGTTCG,+,0.00) -97(TCGGGCGG,-,0.00) 393(CGGCAGCAGCGG,+,0.00) -80(GGGCGGCGAGGG,-,0.00),203(CCGCCTCAGCCC,+,0.00) 353(CGGCGGAC,+,0.00) 125(AGGAGCCGGAGG,+,0.00) 291(GGGACAGGAAGC,+,0.00) 305(GGCGCGGC,-,0.00),380(TGGGCGGC,-,0.00) -124(CGCCGCCGCCGC,-,0.00),-121(CGCCGCCGCCGC,-,0.00),227(GCGGGGCGAGTG,+,0.00),383(GCGGCGGCGGCG,+,0.00) 564(CGGGGCCCCGCG,-,0.00),580(CGCCGCTCCCCG,-,0.00) 401(GCGGCGAGGC,+,0.00),453(GCTCCGCAGA,-,0.00) 401(GCGGCGAGGCTG,+,0.00) 561_WT_peak_440 chr1 145395450 145395694 + 149 NA intron (NM_001039703, intron 68 of 85) tRNA-Lys-AAG|tRNA|tRNA -17619 NM_213653 148738 Hs.632436 NM_145277 HPRD:10521 HFE2 HFE2A|HJV|JH|RGMC hemochromatosis type 2 (juvenile) protein-coding 0.053279 0.477551 -162(TAGCCGCT,+,0.00) -38(CCGACTGA,+,0.00) 561_WT_peak_6716 chr7 74267401 74267634 + 149 NA intron (NM_173537, intron 1 of 15).2 CpG 355 NM_173537 84163 Hs.647017 NM_173537 HPRD:16402 GTF2IRD2 FP630|GTF2IRD2 alpha|GTF2IRD2A GTF2I repeat domain containing 2 protein-coding 0.107296 0.739316 60(GGCGTCGG,-,0.00) -146(TGCGTACG,+,0.00) -129(CCCGCGGC,-,0.00),-9(GCCGGGCG,+,0.00) 58(GCGGCGTCGGCG,+,0.00) -118(GCTTCCCCGC,-,0.00) -12(GCGGCCGGGCGG,+,0.00) 561_WT_peak_4527 chr2 242255450 242255946 + 149 NA promoter-TSS (NM_005336) promoter-TSS (NM_005336) 422 NM_001008492 4735 Hs.721234 NM_004404 HPRD:03297 SEPT2 DIFF6|NEDD-5|NEDD5|Pnutl3|hNedd5 septin 2 protein-coding 0.090726 0.676056 32(GATTCCGGTGAC,-,0.00) -78(GGCGGCCGAG,+,0.00) 292(AGCGACTA,-,0.00) -101(CCGGCGGGGCGG,-,0.00),-39(CCCCCGTCCCGG,+,0.00) 98(GGCGTCGA,-,0.00),222(GGCGTGGA,-,0.00) -118(CGGCTGGCTCTG,-,0.00) -130(TCGGGCGG,-,0.00) 11(AGGCCCGGGC,-,0.00) -20(TAGTGCCG,+,0.00) 0(CCGACACG,-,0.00) -162(GCTGCGGGGG,+,0.00) 561_WT_peak_7198-2 chr9 272778 273450 + 149 NA promoter-TSS (NM_001190458) promoter-TSS (NM_001190458) 66 NM_001193536 81704 Hs.132599 NM_203447 HPRD:10920 DOCK8 HEL-205|MRD2|ZIR8 dedicator of cytokinesis 8 protein-coding 0.013393 0.361070 52(AACCACTT,-,0.00) -61(GAGCTCCAGCCC,+,0.00) 126(TTTACGCG,-,0.00) 561_WT_peak_2419 chr15 34393788 34394208 + 149 NA promoter-TSS (NM_020154) promoter-TSS (NM_020154) 55 NM_020154 56851 Hs.160565 NM_020154 HPRD:12670 EMC7 C11orf3|C15orf24|ORF1-FL1 ER membrane protein complex subunit 7 protein-coding 0.073810 0.638955 115(AGCCCCGGAAGC,+,0.00) -106(GGCCGCCGAG,+,0.00),138(CCCGGCCGCC,-,0.00) 159(TGGCGGCT,+,0.00) 108(GACCGGCAGCCC,+,0.00) 238(CCGATCGA,+,0.00) -109(TCGGGCCG,+,0.00) 247(TAGCGAGG,-,0.00) 81(GCCGCCATGACA,+,0.00) 561_WT_peak_4000 chr2 27593184 27593838 + 149 NA promoter-TSS (NM_172195) promoter-TSS (NM_172195) 148 NR_049784 9784 Hs.278569 NM_014748 HPRD:05812 SNX17 - sorting nexin 17 protein-coding 0.100917 0.691603 368(GATAACGGGCCC,-,0.00) 433(CTGGGCCGCC,-,0.00) 53(AGGTGGCT,+,0.00),392(AGCGGCCT,-,0.00) 124(CCGCCTTCCCAC,+,0.00) 316(CGCCTACG,+,0.00) 349(CGGGCCGGGC,-,0.00) 242(CCGTGCCG,+,0.00),247(CCGTGCCG,+,0.00) 221(CCCTCACAGTCC,+,0.00) -26(TTCCGACG,-,0.00) 108(CAGAACCG,+,0.00),280(CGAAACCG,+,0.00) 32(CTTTGGGCTCCC,-,0.00) -53(AGCGCGCA,+,0.00) -14(CCGAGGCCCCGC,-,0.00),297(GCGGGGACAGCG,+,0.00),307(CGGCGGCTCCGC,-,0.00) -134(CACGGAGCCGCC,+,0.00),182(CGCTGAGCAGCG,+,0.00),308(GGCGGCTCCGCC,-,0.00) -152(GGCTCCGCCC,-,0.00) -125(GCCCCGCTGC,-,0.00),-112(GCTCCGCGGC,-,0.00) 345(GAGCCGGGCCGG,-,0.00) 561_WT_peak_2988 chr17 4166997 4167405 + 149 NA promoter-TSS (NM_016376) promoter-TSS (NM_016376) -59 NM_001257999 51479 Hs.696087 NM_016376 HPRD:09717 ANKFY1 ANKHZN|BTBD23|ZFYVE14 ankyrin repeat and FYVE domain containing 1 protein-coding 0.115196 0.687042 134(CGGAACGGAATC,+,0.00) -27(CGCCCGGC,-,0.00) -95(CGGCCCGA,-,0.00) 166(CGGGAGGCGCGG,+,0.00) -20(CCTTCCCCTCCC,-,0.00),185(CGGAGCCGAGGG,+,0.00) 111(TGCGCGGC,-,0.00),171(GGCGCGGC,-,0.00) -48(CGCGGAGCCCCC,+,0.00),42(CGCGGCTCCACA,-,0.00),183(GGCGGAGCCGAG,+,0.00) -91(CCGAGAAG,-,0.00) 561_WT_peak_3011 chr17 7155530 7155964 + 149 NA promoter-TSS (NM_001143775) promoter-TSS (NM_001143775) 227 NM_015362 23587 Hs.417029 NM_015362 HPRD:08520 ELP5 C17orf81|DERP6|MST071|MSTP071 elongator acetyltransferase complex subunit 5 protein-coding 0.080645 0.657471 160(CGGACGCG,-,0.00) 247(GGCGGGGG,+,0.00) 198(TGGGCGGC,-,0.00) 243(GCGGGGCGGGGG,+,0.00) 561_WT_peak_2344 chr14 94421652 94421913 + 149 NA intron (NM_016150, intron 1 of 7) intron (NM_016150, intron 1 of 7) 1985 NM_016150 51676 Hs.510327 NM_016150 HPRD:05768 ASB2 ASB-2 ankyrin repeat and SOCS box containing 2 protein-coding 0.019157 0.549618 -164(AGCCACTT,-,0.00) 561_WT_peak_4150 chr2 74648452 74648792 + 149 NA promoter-TSS (NM_032118) promoter-TSS (NM_032118) -263 NM_032118 84058 Hs.643480 NM_032118 HPRD:08577 WDR54 - WD repeat domain 54 protein-coding 0.094118 0.648094 108(GCATCCGGGCCG,-,0.00) -34(GGCGGCCCAG,+,0.00) -144(AAGCGTTT,+,0.00),124(AGCCACCT,-,0.00) -27(CAGAGCCAGCCC,+,0.00) 118(CGCGTAAG,+,0.00) -99(TACCGACG,-,0.00) -36(TGGGCGGC,-,0.00) 164(CGCTCGCCCCGC,-,0.00) 114(GGGCCGCGTA,+,0.00) 109(CATCCGGGCCGC,-,0.00) 561_WT_peak_728 chr1 213188416 213188727 + 149 NA 5' UTR (NM_001300755, exon 1 of 9) 5' UTR (NM_001300755, exon 1 of 9) 280 NM_001300755 90806 Hs.157078 NM_144567 HPRD:14279 ANGEL2 Ccr4d|KIAA0759L angel homolog 2 (Drosophila) protein-coding 0.064309 0.608974 -2(CGGCCTCCCCGC,+,0.00) 89(AGGCCAGGGA,-,0.00) 561_WT_peak_1456 chr11 94800267 94800650 + 149 NA exon (NM_032102, exon 1 of 1) exon (NM_032102, exon 1 of 1) 417 NR_103726 10929 Hs.476680 NM_032102 SRSF8 DSM-1|SFRS2B|SRP46 serine/arginine-rich splicing factor 8 protein-coding 0.140992 0.713542 -29(CCGCCCCCCTCC,+,0.00) -69(GTTTCCGGGCCC,-,0.00) 156(GCGACGCC,+,0.00) 202(CGGACGCG,-,0.00) -155(CGCCCGGC,-,0.00) -8(CGGCATGA,-,0.00),152(CGGCGCGA,-,0.00) -162(GCCTCTCCGCCC,+,0.00) 189(GGGCGGAGCT,+,0.00) 176(GCCGCCATGGAC,+,0.00) 561_WT_peak_2980 chr17 2303759 2304545 + 149 NA 5' UTR (NM_020310, exon 1 of 6) 5' UTR (NM_020310, exon 1 of 6) 106 NM_020310 4335 Hs.626579 NM_020310 HPRD:04331 MNT MAD6|MXD6|ROX|bHLHd3 MAX network transcriptional repressor protein-coding 0.100509 0.688691 524(CGGACCGGAGCC,+,0.00) 479(CCCGGCCGCC,-,0.00) 66(TAGCGTCT,+,0.00) -89(CCCGGGAGGGGG,-,0.00),-88(CCGGGAGGGGGC,-,0.00),98(CCGGGGGCGCGC,-,0.00) 531(GAGCCCCCGCCC,+,0.00) 194(AGGGCTGGGC,-,0.00) 97(GCCGGGGG,+,0.00),382(CCCGCGGC,-,0.00),477(CCCCCGGC,-,0.00),534(CCCCCGCC,-,0.00) 83(TCGCGCCG,+,0.00) 460(GGGAAGGAGCCG,+,0.00) 69(CGTCTCTA,+,0.00) -68(CGGTTTCG,-,0.00) 199(TGGGCGGC,-,0.00) 375(CTCCCGCCCCGC,-,0.00),472(CGCTGCCCCCGG,-,0.00),485(CGCCGCCCCCGC,-,0.00),573(GCGGGTCCTGCG,+,0.00),586(TGCTGGCCCCGC,-,0.00) -123(CGGGGAGCCGTG,+,0.00),-70(CGCGGTTTCGCG,-,0.00),542(CGCAGGGCCGCG,+,0.00) 404(CCGACAAG,-,0.00) -110(GCTGCCAGGC,+,0.00),-102(GCTCCGCAGG,-,0.00),202(GCGGCGCAGC,+,0.00),202(GCGGCGCAGC,-,0.00),380(GCCCCGCGGC,-,0.00) -5(CAGCCCGGCCGC,-,0.00) 561_WT_peak_4668 chr20 47895082 47895714 + 149 NA promoter-TSS (NR_002433) promoter-TSS (NR_002433) -84 NR_002433 26765 NR_002433 ENSG00000209042 SNORD12C E2|E2-1|E3|RNU106|SNORD106|U106 small nucleolar RNA, C/D box 12C snoRNA 0.055380 0.535545 85(TTGTGCCG,+,0.00) 16(CCGTTTTG,-,0.00) 409(CGGGTACA,+,0.00) -161(GCGGAGCGGGCG,+,0.00) 561_WT_peak_2122 chr14 21924488 21924709 + 149 NA Intergenic Intergenic -19141 NM_020920 57680 Hs.530698 NM_020920 HPRD:16712 CHD8 AUTS18|HELSNF1 chromodomain helicase DNA binding protein 8 protein-coding 0.058824 0.563063 -101(CCCCCGCC,-,0.00) 26(GTCCGACT,-,0.00) -130(CGGCCAGGCCCC,-,0.00) 561_WT_peak_682 chr1 203258721 203259208 + 149 NA Intergenic Intergenic 2136 NR_117098 100506775 Hs.443859 NR_117097 LINC01353 - long intergenic non-protein coding RNA 1353 ncRNA 0.020534 0.559426 29(AGGCCTCT,+,0.00),202(AGGCCTCT,+,0.00) 91(GAGCGCCTCCCC,+,0.00) -56(TTTCCCCG,-,0.00) 561_WT_peak_5742 chr5 52337183 52337469 + 149 NA intron (NR_073106, intron 2 of 29) MIR|SINE|MIR 52170 NR_073106 3673 Hs.482077 NM_002203 HPRD:01893 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) protein-coding 0.006993 0.355401 -71(AGCCACTA,-,0.00),77(AGCCACAT,-,0.00) 69(TAGCCACG,-,0.00) 561_WT_peak_3910 chr19 57702816 57703080 + 149 NA promoter-TSS (NM_003417) promoter-TSS (NM_003417) 80 NM_003417 9422 Hs.515634 NM_003417 ZNF264 - zinc finger protein 264 protein-coding 0.083333 0.660377 -64(CCGGTCGG,-,0.00) 73(CCCCCGCC,-,0.00) -57(GGGCCGCTTT,+,0.00) 561_WT_peak_3342 chr17 73285526 73286398 + 148 NA promoter-TSS (NM_021734) promoter-TSS (NM_021734) -432 NM_001126121 60386 Hs.514470 NM_021734 HPRD:08405 SLC25A19 DNC|MCPHA|MUP1|THMD3|THMD4|TPC solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 protein-coding 0.068807 0.518900 653(CGCACGCG,-,0.00) 33(TCGACCGA,+,0.00) 316(CCCTCTCACCCC,+,0.00) 35(GACCGACG,-,0.00) 437(CGGTTTTG,-,0.00) -61(CGGGTAAT,+,0.00),157(TTGACCCG,-,0.00) 145(GGCGCGGT,-,0.00) 574(CCGCGTAG,-,0.00) 561_WT_peak_7580 chrX 73163946 73164501 + 148 NA promoter-TSS (NR_024582) promoter-TSS (NR_024582) 64 NR_024582 554203 Hs.648316 NR_024582 ENSG00000225470 JPX DCBALD06|ENOX|LINC00183|NCRNA00183 JPX transcript, XIST activator (non-protein coding) ncRNA 0.068468 0.561151 31(CCCCCGGC,-,0.00) -94(CGGCACGG,-,0.00),-77(CGGCACGG,-,0.00) 230(TAGCGAGG,-,0.00) 133(GTCCGAAG,-,0.00) 561_WT_peak_2593 chr15 89183177 89183661 + 148 NA intron (NM_002201, intron 2 of 3) intron (NM_002201, intron 2 of 3) 1380 NM_002201 3669 Hs.459265 NM_002201 ISG20 CD25|HEM45 interferon stimulated exonuclease gene 20kDa protein-coding 0.016529 0.529897 -138(AGAGGCTT,-,0.00) -127(CCCTCCCAGTCC,+,0.00) 40(ACTTTCTGTTTC,-,0.00) 561_WT_peak_7501 chrX 10087588 10087866 + 148 NA intron (NM_015691, intron 11 of 22) intron (NM_015691, intron 11 of 22) -37258 NM_001256944 1183 Hs.495674 NM_001830 HPRD:02362 CLCN4 CLC4|ClC-4|ClC-4A chloride channel, voltage-sensitive 4 protein-coding 0.035971 0.440860 55(CCGCCTAG,-,0.00) 561_WT_peak_5549 chr4 90215641 90216014 + 148 NA intron (NM_198281, intron 1 of 1) intron (NM_198281, intron 1 of 1) 13334 NM_198281 285513 Hs.605082 NM_198281 GPRIN3 GRIN3 GPRIN family member 3 protein-coding 0.002681 0.358289 -21(GCTTCCTGTTTT,-,0.00) 561_WT_peak_2156 chr14 25162211 25162469 + 148 NA Intergenic Intergenic -58908 NM_004131 3002 Hs.1051 NM_004131 HPRD:00476 GZMB CCPI|CGL-1|CGL1|CSP-B|CSPB|CTLA1|CTSGL1|HLP|SECT granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) protein-coding 0.015504 0.413127 -66(AGAGGCCT,-,0.00) -113(CGGGAAAA,+,0.00) 561_WT_peak_5095 chr3 47866526 47866771 + 148 NA intron (NM_014966, intron 5 of 22) CpG 22249 NM_014966 22907 Hs.517948 NM_014966 HPRD:13142 DHX30 DDX30|RETCOR DEAH (Asp-Glu-Ala-His) box helicase 30 protein-coding 0.126531 0.739837 64(GGGCGGGCGGTC,-,0.00) 6(CCCCCGGC,-,0.00),59(GGCGGGGG,+,0.00) -19(GCCGCCGAGGCC,+,0.00) 72(GGTCCGCAGC,-,0.00) 561_WT_peak_1114 chr10 101380462 101381050 + 148 NA promoter-TSS (NM_031212) promoter-TSS (NM_031212) -535 NM_031212 81894 Hs.403790 NM_031212 ENSG00000155287 SLC25A28 MFRN2|MRS3/4|MRS4L solute carrier family 25 (mitochondrial iron transporter), member 28 protein-coding 0.108844 0.675722 -39(GACTTCGGGCCC,-,0.00) 237(AAGCCGTT,+,0.00) 147(CCGTGTTCCCGC,+,0.00) 28(GGCGGCGA,-,0.00) 363(CGCCCGGC,-,0.00) -68(GAGCGACG,-,0.00) -94(CGTCGGTC,+,0.00) 4(TGCGCGGG,-,0.00) 131(CCCTGGCCCCGG,-,0.00),181(GCGGGGCCGGCC,+,0.00) -44(GGGCCGACTT,+,0.00) 166(CGTCGCGG,+,0.00) 127(GCGGCCCTGGCC,+,0.00),129(GGCCCTGGCCCC,-,0.00) 561_WT_peak_1836 chr12 105081678 105082077 + 147 NA intron (NM_018413, intron 2 of 2) intron (NM_018413, intron 2 of 2) 96466 NR_037487 100500843 NR_037487 MIR3922 - microRNA 3922 ncRNA 0.017544 0.465000 561_WT_peak_2484 chr15 52305306 52305591 + 147 NA Intergenic L3|LINE|CR1 -5963 NM_002748 5597 Hs.411847 NM_002748 HPRD:04213 MAPK6 ERK3|HsT17250|PRKM6|p97MAPK mitogen-activated protein kinase 6 protein-coding 0.000000 0.367133 561_WT_peak_4564 chr20 10415345 10415971 + 147 NA promoter-TSS (NR_072977) promoter-TSS (NR_072977) -293 NM_001009608 128710 Hs.668782 NM_001009608 HPRD:12516 SLX4IP C20orf94|bA204H22.1|bA254M13.1|dJ1099D15.3 SLX4 interacting protein protein-coding 0.044728 0.454545 390(GGCGGCTGAG,+,0.00) 107(AAGCGTTT,+,0.00) 422(CTGGGAAGGAGG,-,0.00) 124(TCGGTCAG,-,0.00) 217(GTCCGGCG,-,0.00) -118(TTCACCCG,-,0.00),-4(TTTATCCG,-,0.00) 385(TGGGCGGC,-,0.00) -152(GTTTCGCAGC,-,0.00),355(GCAGCGAAGC,+,0.00) 561_WT_peak_4267 chr2 113403501 113403778 + 147 NA 5' UTR (NM_005415, exon 1 of 11) 5' UTR (NM_005415, exon 1 of 11) 205 NM_005415 6574 Hs.187946 NM_005415 HPRD:08846 SLC20A1 GLVR1|Glvr-1|PIT1|PiT-1 solute carrier family 20 (phosphate transporter), member 1 protein-coding 0.119134 0.708633 -110(CTCGGCCGCT,-,0.00) 93(CGCGGACG,+,0.00) -94(CCCGCGGC,-,0.00),87(GCCGGGCG,+,0.00) 17(CCCGCTCCGCCC,+,0.00) -113(CTTCTCGG,+,0.00),55(CCGCCTCG,-,0.00) 97(GACGCCGTGGCG,+,0.00) 561_WT_peak_6715 chr7 74071562 74071976 + 147 NA promoter-TSS (NM_001163636) promoter-TSS (NM_001163636) -222 NM_032999 2969 Hs.647041 NM_001518 HPRD:03399 GTF2I BAP135|BTKAP1|DIWS|GTFII-I|IB291|SPIN|TFII-I|WBS|WBSCR6 general transcription factor IIi protein-coding 0.113527 0.698795 3(GGCGGCCGCG,+,0.00) -62(ACGACGCC,+,0.00) -81(CGGCTGGCGCTC,-,0.00) -71(TCGGTGGG,-,0.00) 80(AGGGCCGGGC,-,0.00) 83(GCCGGGCG,+,0.00) 7(GCCGCGCA,+,0.00),126(GGCGCGGT,-,0.00),208(TGGGCGGC,-,0.00) 160(CGCCGCCGCCGC,-,0.00) 209(GGGCGGCGCT,+,0.00) 561_WT_peak_4576 chr20 18547776 18548107 + 147 NA promoter-TSS (NR_015432) promoter-TSS (NR_015432) -132 NR_015432 388789 Hs.349092 NR_015432 ENSG00000232388 LINC00493 - long intergenic non-protein coding RNA 493 ncRNA 0.078550 0.569277 16(CTTTCCGGGCCA,-,0.00),51(AGAGCCGGAAGC,+,0.00) 11(AGCGACTT,-,0.00),76(TGGCGGCT,+,0.00) 113(GCGACGCC,+,0.00) 134(CCGCCTCTGCCG,-,0.00) 111(CAGCGACG,-,0.00) 110(GCAGCGACGC,+,0.00) 561_WT_peak_2300 chr14 76008687 76009126 + 147 NA intron (NM_006399, intron 2 of 2) intron (NM_006399, intron 2 of 2) 20122 NM_006399 10538 Hs.509964 NM_006399 HPRD:09820 BATF B-ATF|BATF1|SFA-2|SFA2 basic leucine zipper transcription factor, ATF-like protein-coding 0.009112 0.568182 118(AGCCACTT,-,0.00) 187(GGGCTGGCAGGG,-,0.00) 561_WT_peak_6287 chr6 32812036 32812416 + 147 NA promoter-TSS (NM_148919).2 promoter-TSS (NM_148919).2 363 NR_037173 100507463 Hs.731555 NR_037173 ENSG00000204261 PSMB8-AS1 TAP1-AS1|TAPSAR1 PSMB8 antisense RNA 1 (head to head) ncRNA 0.047368 0.593176 -140(AGGCCCGGGC,-,0.00) 199(CCCTTTCTGCCC,+,0.00) -2(CAAAACCA,+,0.00) 69(TATACCCG,-,0.00) 93(GCGGCGCCAGGG,+,0.00) 561_WT_peak_4089 chr2 61991241 61991504 + 147 NA Intergenic CpG 89906 NR_037710 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 family with sequence similarity 161, member A protein-coding 0.098859 0.606061 -95(AAGCCGTT,+,0.00),-94(AGCCGTTT,-,0.00) 7(CGGGGGAGCCGG,-,0.00) 20(GGCGTAGA,-,0.00) 14(GCCGGGGG,+,0.00),49(CCCGCGGC,-,0.00) 32(AGGCACGA,-,0.00) 10(GGGAGCCGGGGG,+,0.00) 55(GCCGCGCA,+,0.00) 561_WT_peak_2738 chr16 23568535 23569189 + 147 NA promoter-TSS (NM_001083614) promoter-TSS (NM_001083614) 0 NM_019116 56061 Hs.3459 NM_019116 HPRD:15606 UBFD1 UBPH ubiquitin family domain containing 1 protein-coding 0.093272 0.700763 29(TCGGCCTCCGCC,+,0.00),222(GGAGGAGGCGGG,-,0.00) 370(GGCGGCCGGG,+,0.00) -76(AGGCCTCT,+,0.00),324(AGCGGCCT,-,0.00) 400(CGGGGGTGGCGG,-,0.00),465(CCGGGAGGGAGA,-,0.00) 417(GGGCCGGGGCTG,-,0.00) 458(GCCCGGCCCG,+,0.00) 398(GGCGGGGG,+,0.00) -111(TCGCGCCG,+,0.00) 221(CGGAGGAGGCGG,+,0.00) 265(GGGCTGTGAGAG,-,0.00) -104(GTCCTACG,-,0.00) -85(GGCCGCCGAAGG,+,0.00) 414(GCCGGGCCGGGG,+,0.00) -42(GCCGCCATGTGG,+,0.00),361(CATCATGGCGGC,-,0.00) 287(GCTGCGGGGG,+,0.00) 259(CCGGCCGGGCTG,+,0.00),304(CAGCCAGCTCGC,-,0.00),455(GCGGCCCGGCCC,+,0.00) 561_WT_peak_3840 chr19 49298608 49298888 + 147 NA intron (NM_001284325, intron 11 of 11) intron (NM_001284325, intron 11 of 11) 15572 NM_001190 587 Hs.512670 NM_001190 HPRD:00217 BCAT2 BCAM|BCATM|BCT2|PP18 branched chain amino-acid transaminase 2, mitochondrial protein-coding 0.057143 0.608541 561_WT_peak_6387 chr6 87864712 87865795 + 147 NA promoter-TSS (NM_015021) promoter-TSS (NM_015021) -16 NM_015021 23036 Hs.485892 NM_015021 ENSG00000188994 ZNF292 Nbla00365|ZFP292|ZN-16|Zn-15|bA393I2.3 zinc finger protein 292 protein-coding 0.085873 0.649446 239(CCGCCCTTCTCC,+,0.00),647(GGAAGAGGGCGA,-,0.00) 669(GGCGGCCGAG,+,0.00) 478(AGGCGGCT,+,0.00) 472(CGGCGAAGGCGG,-,0.00) 336(TCGGCGCC,+,0.00),705(TCGGCGCC,+,0.00) 406(TGCGTACG,+,0.00),408(CGTACGCG,-,0.00) 163(GCCCGCCCCT,+,0.00) 353(CGCCCGGC,-,0.00),873(CCCGCGGC,-,0.00) 357(CGGCACGT,-,0.00) 118(TTTTCCCG,-,0.00) 261(CCTTCACCTCCC,-,0.00),730(GGGAGTAGAAGG,+,0.00) 864(TGCGCGGT,-,0.00) 866(CGCGGTCCCCGC,-,0.00) 490(CGCGGAGCTGCA,+,0.00) -86(GGGCGGGTTT,+,0.00),235(AACCCCGCCC,-,0.00) 124(CGTCGCGG,+,0.00),487(CGTCGCGG,+,0.00),666(CTAGGCGG,+,0.00) 473(GGCGAAGGCGGC,-,0.00) 471(GCGGCGAAGG,+,0.00) 561_WT_peak_7388 chr9 112681148 112681501 + 147 NA intron (NM_001037293, intron 4 of 6) L1M3f|LINE|L1 -129554 NM_001004065 11217 Hs.591908 NM_001004065 ENSG00000241978 AKAP2 AKAP-2|AKAPKL|PRKA2 A kinase (PRKA) anchor protein 2 protein-coding 0.022663 0.443503 20(AACCACTT,-,0.00) 75(CGGTTTTA,-,0.00) 561_WT_peak_2246 chr14 61943347 61943810 + 146 NA intron (NM_006255, intron 9 of 13) intron (NM_006255, intron 9 of 13) 93334 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LOC101927780 - uncharacterized LOC101927780 ncRNA 0.004320 0.405172 238(GTTTCCTGTTTA,-,0.00) 561_WT_peak_2834 chr16 46864870 46865098 + 146 NA promoter-TSS (NM_001001436) promoter-TSS (NM_001001436) 90 NM_001001436 388272 Hs.406551 NM_001001436 HPRD:17370 C16orf87 - chromosome 16 open reading frame 87 protein-coding 0.114035 0.729258 -131(CTCGGCCTCC,-,0.00) -123(CCGGGAGCCCGG,-,0.00),-72(CCGCCCGCCCGC,+,0.00),-64(CCGCGCGCCCGG,+,0.00) -59(CGCCCGGC,-,0.00),-52(CCCCCGGC,-,0.00) 40(TAGCGGCG,-,0.00),52(CAGCGACG,-,0.00) -86(CCGCCAAG,-,0.00) 561_WT_peak_4759 chr21 30374970 30375380 + 145 NA Intergenic CpG -9898 NM_015565 26046 Hs.288773 NM_015565 HPRD:10327 LTN1 C21orf10|C21orf98|RNF160|ZNF294 listerin E3 ubiquitin protein ligase 1 protein-coding 0.078049 0.622871 -13(GCTTCCGGGTCA,-,0.00) 179(AGACACTT,-,0.00) 15(CGCACGCG,-,0.00) 561_WT_peak_3678 chr19 17958599 17958783 + 145 NA intron (NM_000215, intron 1 of 23) CpG 150 NM_000215 3718 Hs.515247 NM_000215 HPRD:02547 JAK3 JAK-3|JAK3_HUMAN|JAKL|L-JAK|LJAK Janus kinase 3 protein-coding 0.059783 0.675676 -89(CTGCCCCAGCCC,+,0.00) -4(CGGGCAGGGA,-,0.00) -71(CCCCCGCC,-,0.00) -40(GGGCCGAGCC,+,0.00) -147(GCCTCGCAGC,-,0.00) 561_WT_peak_800 chr1 234744086 234744400 + 145 NA exon (NM_182972, exon 1 of 2) exon (NM_182972, exon 1 of 2) 1028 NM_182972 359948 Hs.350268 NM_182972 HPRD:17160 IRF2BP2 - interferon regulatory factor 2 binding protein 2 protein-coding 0.060510 0.622222 -32(GGCCTCGA,-,0.00) 55(CAGCGCCAGCAG,+,0.00) 72(CGCGCACG,+,0.00) 115(CCCGCGGC,-,0.00) 129(CCGCACCTTCCG,-,0.00) 78(CGGTCTTG,-,0.00) -148(GGGGTAAA,+,0.00) 561_WT_peak_3707 chr19 24269976 24270326 + 145 NA intron (NM_001278678, intron 1 of 1) intron (NM_001278678, intron 1 of 1) 189 NM_001278678 9534 Hs.434406 NM_004876 HPRD:05304 ZNF254 BMZF-5|HD-ZNF1|ZNF539|ZNF91L zinc finger protein 254 protein-coding 0.037143 0.609687 58(AAGCGGCT,+,0.00),144(TGGCGGCT,+,0.00) 12(GTCCGACA,-,0.00) 174(GAGTCCTGTTTC,-,0.00) -139(CGCTGTCGCCGG,-,0.00) 159(CAGCCAGACCCC,-,0.00) 561_WT_peak_5428 chr4 25161384 25162075 + 145 NA promoter-TSS (NR_037934) promoter-TSS (NR_037934) 475 NM_016955 51091 Hs.253305 NM_016955 HPRD:11561 SEPSECS LP|PCH2D|SLA|SLA/LP Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase protein-coding 0.072359 0.570809 288(CCGGGGTCGCGG,-,0.00) 180(TCGGTCAG,-,0.00) 268(CGCCCGGC,-,0.00) 156(AGGCTGAGAAGG,-,0.00),373(GCCTCACAGCCC,+,0.00) 95(CAAAACCC,+,0.00) 274(GCGGAGCCAGAG,+,0.00) 422(CCGCGAAG,-,0.00) 421(GCCGCGAAGC,+,0.00) 561_WT_peak_4787 chr21 36420941 36421606 + 145 NA intron (NM_001754, intron 1 of 8) intron (NM_001754, intron 1 of 8) 322 NM_001754 861 Hs.149261 NM_001754 HPRD:01043 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBFA2|EVI-1|PEBP2aB runt-related transcription factor 1 protein-coding 0.018045 0.459459 124(GGCGGGGG,+,0.00) 329(GCCGCCTTGGCT,+,0.00) 363(GCTGCGAAAC,+,0.00) 561_WT_peak_38 chr1 6761681 6761925 + 145 NA exon (NM_018198, exon 1 of 16) exon (NM_018198, exon 1 of 16) 163 NM_018198 55735 Hs.462640 NM_018198 HPRD:07112 DNAJC11 dJ126A5.1 DnaJ (Hsp40) homolog, subfamily C, member 11 protein-coding 0.102459 0.689796 -126(CCGCCAGCCCGG,+,0.00),41(CCGGCAAGGCCG,-,0.00) -128(CACCGCCAGCCC,+,0.00) -109(CCGAACGA,+,0.00) -120(GCCCGGCCCT,+,0.00) -145(GGCGGGGG,+,0.00) 7(CGTCGCCA,+,0.00) 36(CCAAACCG,+,0.00) -121(AGCCCGGCCC,-,0.00) -148(CGTGGCGG,+,0.00) -126(CCGCCAGCCCGG,-,0.00) 561_WT_peak_4188 chr2 88354783 88355418 + 145 NA intron (NM_016618, intron 1 of 3) CpG 148 NM_016618 51315 Hs.469254 NM_016618 HPRD:11269 KRCC1 CHBP2 lysine-rich coiled-coil 1 protein-coding 0.108661 0.698113 -38(TCGGCTTCCTCC,+,0.00),349(GGAGGAGGCGGA,-,0.00) -89(TCCTCCGGGTCT,-,0.00),360(AGACCCGGCTTC,+,0.00) 322(CTCCGCCGCC,-,0.00) 217(GGCGTCTA,-,0.00),383(TCGCCGCC,+,0.00),426(GGCGGCGA,-,0.00) 210(AGGGGCGGGC,-,0.00) 104(CGCCCGGC,-,0.00),172(CCCCCGCC,-,0.00),235(CCCCCGCC,-,0.00) 63(TCGGGCCG,+,0.00) -37(CGGCTTCCTCCG,-,0.00) 53(TGCGCGGG,-,0.00),67(GCCGCGCC,+,0.00),450(TGCGCGGC,-,0.00) 29(CCGGGGGCGGCG,+,0.00),101(GCGCGCCCGGCG,+,0.00),167(GGCCGCCCCCGC,-,0.00),235(CCCCCGCCCCGC,-,0.00),451(GCGCGGCCAGCC,+,0.00) 65(GGGCCGCGCC,+,0.00) 418(GACGCCATGGCG,+,0.00),420(CGCCATGGCGGC,-,0.00) 561_WT_peak_6557 chr6 170403424 170403998 + 145 NA Intergenic Intergenic 167946 NR_002787 154449 Hs.447751 NR_002787 ENSG00000230960 LOC154449 - uncharacterized LOC154449 ncRNA 0.050523 0.645217 345(CCGTGCCG,+,0.00) -118(GGGCTGGGAGTG,-,0.00) -46(TGCGCGGG,-,0.00),398(TGGGCGGC,-,0.00) -105(GCGGGGAGAGGG,+,0.00) -147(GCTGGGAAGG,+,0.00) 561_WT_peak_955 chr10 38383047 38383409 + 145 NA promoter-TSS (NM_001007094) promoter-TSS (NM_001007094) -36 NM_001178101 7587 Hs.292575 NM_003421 HPRD:18508 ZNF37A KOX21|ZNF37 zinc finger protein 37A protein-coding 0.063536 0.564738 -90(ATGCGGCT,+,0.00),90(AGCCGCTT,-,0.00) -10(CGGCGCGA,-,0.00),36(CGGCGCGA,-,0.00) 189(CGGGTAGA,+,0.00) -11(GCGGCGCGAGGG,+,0.00) 81(CGTCGCGG,+,0.00) 561_WT_peak_3560 chr19 1438268 1438825 + 145 NA intron (NM_001018, intron 1 of 3) CpG 183 NM_001018 6209 Hs.406683 NM_001018 HPRD:01613 RPS15 RIG|S15 ribosomal protein S15 protein-coding 0.131059 0.700717 310(GGGCCCGGTGGC,+,0.00) 114(AGGCGGCT,+,0.00) -121(CCGGGAAAGCGG,-,0.00),-89(CCGAGGGGGCGG,-,0.00) -127(TCGCCGCC,+,0.00) -98(CGCGCACG,+,0.00) 102(TCCCGACCCT,+,0.00) 81(CCCGCGGC,-,0.00) -14(CGGCAAGA,-,0.00),156(CGGGACGA,-,0.00) 168(GGGCTGGGAAGG,-,0.00) -117(GAAAGCGGAAGC,+,0.00) -54(ACTGCGCA,+,0.00) 61(CGCGGGGGCCGC,-,0.00),278(CGGCGGCGCCGC,-,0.00),315(CGGTGGCCCCGG,-,0.00) 213(CCCGGAGCCGCG,+,0.00),279(GGCGGCGCCGCG,+,0.00),279(GGCGGCGCCGCG,-,0.00) 137(GGGCGGACTT,+,0.00) 161(CGACGCGG,+,0.00) -78(GGACATGCCGGC,-,0.00) 170(GCTGGGAAGG,+,0.00) 561_WT_peak_2261 chr14 65754515 65754861 + 145 NA Intergenic Intergenic 47213 NR_039857 100616176 NR_039857 miRBase:MI0017341 MIR4708 - microRNA 4708 ncRNA 0.014451 0.463977 -148(TTTTCCCG,-,0.00),78(CTGGTAAA,+,0.00) -143(CCGACAAG,-,0.00) 133(GGTCATGGCTGC,-,0.00) 561_WT_peak_1608 chr12 12849310 12849614 + 145 NA promoter-TSS (NM_006143) promoter-TSS (NM_006143) -341 NM_006143 2842 Hs.657862 NM_006143 HPRD:04236 GPR19 - G protein-coupled receptor 19 protein-coding 0.036184 0.452459 -77(AGCGGCAT,-,0.00),111(TGGCGGCT,+,0.00) 561_WT_peak_4468 chr2 217363567 217363828 + 145 NA intron (NM_000998, intron 1 of 3) CpG 177 NM_000998 6168 Hs.433701 NM_000998 RPL37A L37A ribosomal protein L37a protein-coding 0.076628 0.645038 48(GGCCTGGCGCGC,-,0.00) 29(GGCGGGGG,+,0.00) 66(CGGGTTAA,+,0.00) 35(GGCGCCTTGGCT,+,0.00) 36(GCGCCTTGGCTG,+,0.00) 561_WT_peak_2310 chr14 78227072 78227465 + 145 NA promoter-TSS (NM_001173978) promoter-TSS (NM_001173978) 95 NM_001173978 283579 Hs.375834 NM_174943 HPRD:08080 C14orf178 - chromosome 14 open reading frame 178 protein-coding 0.089059 0.621827 -130(AGCCACTA,-,0.00) 68(TAGCGGCG,-,0.00) 10(CGGGTGAA,+,0.00) 561_WT_peak_1677 chr12 48592171 48592493 + 145 NA Intergenic CpG 4743 NM_001004134 121275 Hs.446790 NM_001004134 HPRD:11812 OR10AD1 OR10AD1P|OR12-1 olfactory receptor, family 10, subfamily AD, member 1 protein-coding 0.046584 0.569659 -8(AAGTGTCT,+,0.00) 143(GGGGAGACGCGG,+,0.00) -127(GGGAGCCGAGGG,+,0.00) 561_WT_peak_5315 chr3 169490820 169491500 + 145 NA promoter-TSS (NM_001185119) promoter-TSS (NM_001185119) 307 NM_001185118 55892 Hs.507025 NM_018657 HPRD:06920 MYNN OSZF|ZBTB31|ZNF902 myoneurin protein-coding 0.075000 0.674009 -102(GCTGCCGGGCCT,-,0.00) 291(CCGCCATCCCGG,+,0.00) -72(GAGCGCCAGACG,+,0.00),281(CACCCCCAGCCC,+,0.00) 452(AGGGCAGGGC,-,0.00) -52(CGGCACCA,-,0.00) 461(CGGCAGAAGCCG,+,0.00) 100(CGCCGGAC,+,0.00) -140(TGCGCAGC,-,0.00) -87(CGCAGAGCCCCG,+,0.00) 507(CCGCCTCG,-,0.00) 86(ACCGCCCTGGCC,+,0.00),106(ACCCCCATGGCC,+,0.00),108(CCCCATGGCCCC,-,0.00),453(GGGCAGGGCGGC,-,0.00) 561_WT_peak_3039 chr17 8125843 8126348 + 145 NA non-coding (NR_026951, exon 2 of 3) non-coding (NR_026951, exon 2 of 3) 1266 NR_026951 284029 Hs.121692 NM_173621 HPRD:08755 LINC00324 C17orf44|NCRNA00324 long intergenic non-protein coding RNA 324 ncRNA 0.065347 0.573123 -99(GGTGGCCGAG,+,0.00) 250(TCGTGCCA,+,0.00) -97(TGGCCGAGTT,+,0.00) 561_WT_peak_1826 chr12 100594495 100594931 + 144 NA non-coding (NR_048568, exon 1 of 11) non-coding (NR_048568, exon 1 of 11) 158 NR_048569 64431 Hs.115088 NM_022496 HPRD:12421 ACTR6 ARP6|HSPC281|MSTP136|hARP6|hARPX ARP6 actin-related protein 6 homolog (yeast) protein-coding 0.057339 0.503432 -155(CGTTGCTA,+,0.00) 229(GGGCTGCGAGGC,-,0.00) 9(CAAAATCG,+,0.00) 231(GCTGCGAGGC,+,0.00) 561_WT_peak_7003 chr8 42948664 42949059 + 144 NA intron (NM_001277971, intron 1 of 3) CpG 212 NM_032237 84197 Hs.491646 NM_032237 HPRD:08668 POMK MDDGA12|SGK196 protein-O-mannose kinase protein-coding 0.091139 0.722222 -19(CCCGGCCGCC,-,0.00),159(GGAGGCCGAG,+,0.00) -138(AGAGGCTT,-,0.00),127(AGGTGGCT,+,0.00) -14(CCGCCTGCCCGC,+,0.00) -7(CCCGCGGC,-,0.00) -105(GGGGTGAGAGGG,-,0.00),-29(CCCCCGCAGCCC,+,0.00) 51(ACCGCGCC,+,0.00),84(TGCGCGGT,-,0.00) 165(CGAGGCGG,+,0.00) -29(CCCCCGCAGC,-,0.00) -4(GCGGCCTGTCCG,+,0.00) 561_WT_peak_1589-2 chr12 9917812 9918039 + 144 NA Intergenic Intergenic -4428 NM_001781 969 Hs.208854 NM_001781 HPRD:00119 CD69 AIM|BL-AC/P26|CLEC2C|EA1|GP32/28|MLR-3 CD69 molecule protein-coding 0.008811 0.390351 561_WT_peak_1366 chr11 65487943 65488386 + 144 NA exon (NM_032193, exon 1 of 4) exon (NM_032193, exon 1 of 4) 245 NM_032193 84153 Hs.718438 NM_032193 HPRD:16531 RNASEH2C AGS3|AYP1 ribonuclease H2, subunit C protein-coding 0.124153 0.720721 51(GGCGTCGC,-,0.00),106(TCGTCGCC,+,0.00),135(GCGACGCC,+,0.00) 44(CGGGTACG,+,0.00),130(CCTACGCG,-,0.00) -78(GGGAGCCGTAGT,+,0.00) -105(AGCGCGCA,+,0.00),178(AGCGCGCA,+,0.00) -43(GGCCCTGGCGGA,-,0.00) 226(GCCGCGGAGC,+,0.00) 561_WT_peak_3389 chr17 79791261 79791599 + 144 NA promoter-TSS (NM_001093767) promoter-TSS (NM_001093767) -260 NM_207368 348262 Hs.514632 NM_207368 HPRD:14179 FAM195B - family with sequence similarity 195, member B protein-coding 0.079882 0.681416 -164(GGGTTGGGGCTC,-,0.00) -154(TCGTGGCG,+,0.00) 166(CGGGCAAA,+,0.00) -153(CGTGGCGG,+,0.00) 143(GCGGCCCTGGGC,+,0.00) -46(GACCCAGGCCCC,-,0.00) 561_WT_peak_3116 chr17 30771306 30771891 + 144 NA exon (NM_002815, exon 1 of 14) exon (NM_002815, exon 1 of 14) 117 NM_001270482 5717 Hs.443379 NM_002815 HPRD:05119 PSMD11 Rpn6|S9|p44.5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 protein-coding 0.102564 0.720137 36(GGCGGCCGCG,+,0.00) 300(AGGCCGCT,+,0.00) 178(CCGCCTCCCCGG,+,0.00) 30(GGCGTCGG,-,0.00) 124(CCGACCGG,+,0.00),215(TCGGTCGG,-,0.00) -72(CGCCCGGC,-,0.00),289(GCCGGGGG,+,0.00) -85(ACCCCTCAGCCC,+,0.00) -6(GGGACCCGAGGG,+,0.00) 172(GCCGCGCC,+,0.00) 75(GCGGCGGCGGCG,+,0.00),184(CCCCGGCCCCGC,-,0.00),193(CGCCGGCCCAGC,-,0.00),284(GCCGGGCCGGGG,+,0.00) -106(CGAGGCGG,+,0.00) -130(GCTGGGGAGC,+,0.00),-110(CCTGCGAGGC,+,0.00) 561_WT_peak_4014 chr2 30388000 30388287 + 144 NA Intergenic Intergenic 18393 NM_016061 51646 Hs.515890 NM_016061 HPRD:18312 YPEL5 - yippee-like 5 (Drosophila) protein-coding 0.020906 0.430556 -4(TGGCACGA,-,0.00) 561_WT_peak_1589 chr12 9917412 9917768 + 144 NA Intergenic Intergenic -4093 NM_001781 969 Hs.208854 NM_001781 HPRD:00119 CD69 AIM|BL-AC/P26|CLEC2C|EA1|GP32/28|MLR-3 CD69 molecule protein-coding 0.008427 0.403361 25(CCGACCTA,+,0.00) 561_WT_peak_4063 chr2 48133147 48133590 + 144 NA promoter-TSS (NM_001190274) promoter-TSS (NM_001190274) -436 NM_001190274 80204 Hs.352677 NM_012167 HPRD:06985 FBXO11 FBX11|PRMT9|UBR6|VIT1 F-box protein 11 protein-coding 0.079007 0.630631 234(TCCTCCTCCTCC,+,0.00) -72(GATCCCGGTCCC,-,0.00) 201(GGCGTCGT,-,0.00) -161(CAGACCGA,+,0.00) 39(CGCCCGGC,-,0.00) -135(GTCCGCCG,-,0.00) -105(GCGGCGGCGGCG,+,0.00),-102(GCGGCGGCGGCG,+,0.00),-99(GCGGCGGCGGCG,+,0.00),-96(GCGGCGGCGGCG,+,0.00),253(CCCTGTCGCCGC,-,0.00) -59(CCGACTCG,-,0.00) 561_WT_peak_3214 chr17 44449762 44450014 + 144 NA promoter-TSS (NR_033799) promoter-TSS (NR_033799) -291 NR_033799 728806 Hs.735097 NR_033799 NSFP1 NSFP N-ethylmaleimide-sensitive factor pseudogene 1 pseudo 0.071429 0.588933 -40(CGGCGCGA,-,0.00) 13(CGGCGGAC,+,0.00) 56(GCCCCGCAGC,-,0.00),79(GCGCCGCCGC,-,0.00) 561_WT_peak_2392 chr14 106465486 106465939 + 144 NA Intergenic Intergenic -27354 NR_002224 8755 Hs.662288 NR_002224 ENSG00000233988 ADAM6 C14orf96|tMDCIV ADAM metallopeptidase domain 6, pseudogene pseudo 0.015453 0.634361 -92(AGCGACCT,-,0.00) 561_WT_peak_1311 chr11 61559860 61560344 + 144 NA promoter-TSS (NM_014206) promoter-TSS (NM_014206) -7 NM_004111 2237 Hs.409065 NM_004111 HPRD:02670 FEN1 FEN-1|MF1|RAD2 flap structure-specific endonuclease 1 protein-coding 0.068182 0.643299 94(GCCTCCGGCGCA,-,0.00) 55(CGGCAGGA,-,0.00) 75(CACAACCG,+,0.00) 28(CGCCGCTCCGCC,-,0.00) 13(CCGCGAAG,-,0.00) 561_WT_peak_6384 chr6 86352845 86353171 + 144 NA promoter-TSS (NM_001159677) promoter-TSS (NM_001159677) 35 NM_001159677 10492 Hs.571177 NM_006372 HPRD:06734 SYNCRIP GRY-RBP|GRYRBP|HNRNPQ|HNRPQ1|NSAP1|PP68|hnRNP-Q synaptotagmin binding, cytoplasmic RNA interacting protein protein-coding 0.107362 0.709480 96(CCGCCTTCCCCG,+,0.00) -93(AGGCACGA,-,0.00) -27(CACTCTCGGCCC,+,0.00) -130(TTTACCCC,-,0.00) 90(GCCGCGCC,+,0.00) 72(CGCGGGCTCCGC,-,0.00) 76(GGCTCCGCCC,-,0.00),145(GACCCCGCCC,-,0.00) 1(CCGAGTCG,-,0.00),2(CGAGTCGG,+,0.00) 561_WT_peak_4681 chr20 49434800 49435292 + 144 NA intron (NM_017843, intron 2 of 5) intron (NM_017843, intron 2 of 5) 23615 NM_001010974 55653 Hs.381178 NM_017843 HPRD:06314 BCAS4 CNOL breast carcinoma amplified sequence 4 protein-coding 0.038618 0.588235 314(GGCATCGA,-,0.00) -22(GCGCTGAGAGGA,-,0.00) 260(CCTGCGAGGC,+,0.00) -161(GCAGCCTGGCTG,+,0.00) 561_WT_peak_1028 chr10 70804361 70804629 + 144 NA Intergenic Intergenic -43333 NM_002727 5552 Hs.1908 NM_002727 HPRD:01513 SRGN PPG|PRG|PRG1 serglycin protein-coding 0.003731 0.408922 16(AAGTCTCT,+,0.00) -152(GGGCTGTTAGGG,-,0.00) 561_WT_peak_6257 chr6 30181445 30182191 + 144 NA promoter-TSS (NM_001242783).7 promoter-TSS (NM_001242783).7 -547 NM_001242783 7726 Hs.485041 NM_003449 HPRD:02901 TRIM26 AFP|RNF95|ZNF173 tripartite motif containing 26 protein-coding 0.071046 0.595716 340(GGCCCCGGAAGC,+,0.00) 516(AGCGGCAT,-,0.00) 234(TCGACGCT,+,0.00) 364(AGCGTACG,+,0.00),366(CGTACGCC,-,0.00),416(CGCGTCCG,+,0.00) -74(CCCTCACTGCCC,+,0.00) -121(CGTAGGAC,+,0.00),-37(GTCCGAGG,-,0.00) 465(CCCAGGCGCCGC,-,0.00) 203(GGGCCCAGTT,+,0.00),264(AAAGCGGGCC,-,0.00) 470(GCGCCGCCGC,-,0.00) 504(CAGCCAGGCGGC,-,0.00) 561_WT_peak_7279 chr9 68726042 68726620 + 144 NA promoter-TSS (NR_034006) promoter-TSS (NR_034006) -210 NR_034006 100132352 Hs.231861 NR_034006 LOC100132352 - FSHD region gene 1 pseudogene pseudo 0.088235 0.658031 11(AGCCGCTT,-,0.00),212(AGCCGCCA,-,0.00) 20(CCGCCCCCACGG,+,0.00),72(CAGCGTGCCCGG,+,0.00) 112(TCGGGCGG,-,0.00) 344(TCCCCGCCCT,+,0.00) 138(AGGCACGA,-,0.00) 35(CGTCGCCA,+,0.00) 400(TCCGCGCA,+,0.00) 213(GCCGCCATAGCT,+,0.00) -19(GCGCCGCCGC,-,0.00),222(GCTCCCCAGC,-,0.00) 561_WT_peak_6800 chr7 104623992 104624687 + 144 NA non-coding (NR_039981, exon 1 of 1) non-coding (NR_039981, exon 1 of 1) 7273 NR_039981 100216546 Hs.369356 NR_039981 LINC01004 - long intergenic non-protein coding RNA 1004 ncRNA 0.058993 0.594828 376(GTTGCCGGTTCC,-,0.00) 288(GAGCTGGCGCGC,-,0.00) 519(GGGCGGCGCC,+,0.00) 561_WT_peak_4457 chr2 208031192 208031566 + 143 NA promoter-TSS (NM_003709) promoter-TSS (NM_003709) 201 NM_001270942 8609 Hs.59908 NM_003709 HPRD:07279 KLF7 UKLF Kruppel-like factor 7 (ubiquitous) protein-coding 0.112299 0.736000 60(CCCGCCTCCGCC,+,0.00) -124(CGCGTCCG,+,0.00) -59(ACGGTCGG,-,0.00) 8(GCCGCGGG,+,0.00) 174(GGGCTGCCAGGG,-,0.00) -7(GGCGCGGC,-,0.00) -119(CCGGAGCCCGCG,+,0.00),99(GCGGTGCCGGGG,+,0.00) -86(CGCGTCGCCGCG,+,0.00),-86(CGCGTCGCCGCG,-,0.00) 95(CGAGGCGG,+,0.00) -85(GCGTCGCCGC,-,0.00),11(GCGGGGAAGC,+,0.00) 561_WT_peak_885 chr10 11220643 11221030 + 143 NA intron (NM_001025076, intron 2 of 14) intron (NM_001025076, intron 2 of 14) 13843 NM_001083591 10659 Hs.309288 NM_006561 HPRD:03964 CELF2 BRUNOL3|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding 0.015504 0.474227 -9(TTGGTCGG,-,0.00) 561_WT_peak_579 chr1 160765847 160766111 + 143 NA exon (NM_002348, exon 1 of 10) exon (NM_002348, exon 1 of 10) 115 NM_001033667 4063 Hs.403857 NM_002348 HPRD:02817 LY9 CD229|SLAMF3|hly9|mLY9 lymphocyte antigen 9 protein-coding 0.007576 0.490566 561_WT_peak_5864 chr5 102455659 102455970 + 143 NA promoter-TSS (NM_017676) promoter-TSS (NM_017676) 28 NM_017676 54826 Hs.24088 NM_017676 HPRD:07878 GIN1 GIN-1|TGIN1|ZH2C2 gypsy retrotransposon integrase 1 protein-coding 0.070740 0.522436 96(TCTTGCCG,+,0.00),108(TCGTTCCG,+,0.00) -135(TGGTTTTG,-,0.00) 561_WT_peak_3076 chr17 20946814 20947112 + 143 NA promoter-TSS (NM_015276) promoter-TSS (NM_015276) -611 NM_015276 23326 Hs.462492 NM_015276 ENSG00000124422 USP22 USP3L ubiquitin specific peptidase 22 protein-coding 0.080537 0.695652 76(GAGGGCCAACCC,+,0.00) 28(CCCCCGGC,-,0.00) 23(CGCTGCCCCCGG,-,0.00) 561_WT_peak_4525 chr2 242041500 242042002 + 143 NA promoter-TSS (NR_028049) promoter-TSS (NR_028049) -4 NM_182501 130916 Hs.159556 NM_182501 HPRD:14699 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding 0.129482 0.705765 -33(CGACCCGGAGAA,+,0.00),51(GGCGCCGGAAGC,+,0.00),146(GATTCCGGCCCG,-,0.00) -75(CTCGGCGGCC,-,0.00),-72(GGCGGCCGCG,+,0.00) -107(CCGGGAGGGCTC,-,0.00) 106(CCGACGCC,+,0.00) 119(CAGCGCCAGCGC,+,0.00) 247(CCGTGCCG,+,0.00) 56(CGGAAGCAGCGG,+,0.00),255(CCGCCTCTGCCG,-,0.00) -53(CGTCGCTG,+,0.00) -134(CAAAACCA,+,0.00) 175(CACGGCCCCGCG,-,0.00) -54(GCGTCGCTGC,-,0.00) 561_WT_peak_3331 chr17 72459709 72459961 + 143 NA Intergenic Intergenic -2687 NM_007261 11314 Hs.9688 NM_007261 HPRD:09492 CD300A CLM-8|CMRF-35-H9|CMRF-35H|CMRF35-H|CMRF35-H9|CMRF35H|CMRF35H9|IGSF12|IRC1|IRC1/IRC2|IRC2|IRp60 CD300a molecule protein-coding 0.015873 0.537549 561_WT_peak_6427 chr6 109195794 109196202 + 143 NA intron (NM_032131, intron 4 of 17) MIR3|SINE|MIR 26379 NM_032131 84071 Hs.645481 NM_032131 HPRD:09809 ARMC2 bA787I22.1 armadillo repeat containing 2 protein-coding 0.007353 0.432763 179(TGGTTTTG,-,0.00) 561_WT_peak_3454 chr18 19192092 19192483 + 143 NA promoter-TSS (NM_001291916) promoter-TSS (NM_001291916) 57 NM_006938 6632 Hs.464734 NM_006938 HPRD:03040 SNRPD1 HsT2456|SMD1|SNRPD|Sm-D1 small nuclear ribonucleoprotein D1 polypeptide 16kDa protein-coding 0.084399 0.640306 -63(TCGCGCTCCTCG,+,0.00) 47(GCTTCCGGCCAT,-,0.00),194(TGGCCCGGAGTC,+,0.00) -81(AGCCGCCA,-,0.00) 70(TCGGTCAG,-,0.00) -99(CGTCGCAA,+,0.00),125(CGCCGCTA,+,0.00) 175(GGGCTGTGAAGG,-,0.00) 103(TGTCGGAC,+,0.00) -80(GCCGCCAGGGGC,+,0.00),-12(TCCGCCATGCGC,+,0.00) 561_WT_peak_7428 chr9 129485047 129485657 + 143 NA Intergenic CpG -81933 NM_014007 23099 Hs.355581 NM_014007 HPRD:08346 ZBTB43 ZBTB22B|ZNF-X|ZNF297B zinc finger and BTB domain containing 43 protein-coding 0.078689 0.713584 -88(GGGCCCGGCGGC,+,0.00) 103(GGCGGGCGAG,+,0.00),185(GGGGGCCGAG,+,0.00) -39(AGACACTT,-,0.00) -132(CCGGGGAGGCTC,-,0.00),100(CCGGGCGGGCGA,-,0.00),336(CCTCCCTCCCCG,+,0.00),360(CCCCCTTCCCCG,+,0.00) 16(GGGCGCCCGCCC,+,0.00) -136(TCGGCCGG,-,0.00),436(TCGGGCGG,-,0.00) -94(AGGGCGGGGC,-,0.00) 25(CCCCCGCC,-,0.00),182(GGCGGGGG,+,0.00) -107(CCGCTTCCTCCC,-,0.00),330(CCGCTCCCTCCC,-,0.00) 221(GGGCAGAGAGCG,-,0.00) -12(CGGGGAAA,+,0.00) 79(CCCGCGCA,+,0.00) -91(GCGGGGCCCGGC,+,0.00),72(TGCGGGCCCCGC,-,0.00),73(GCGGGCCCCGCG,+,0.00) 187(GGGCCGAGCT,+,0.00) 200(CCGAGAAG,-,0.00) -98(CCCCAGGGCGGG,-,0.00),-81(GCGGCCATGGGC,+,0.00) -89(GGGGCCCGGCGG,+,0.00) 561_WT_peak_1997 chr13 37633211 37633321 + 143 NA intron (NM_001014286, intron 1 of 25) intron (NM_001014286, intron 1 of 25) 358 NM_001278482 55578 Hs.435815 NM_017569 HPRD:10135 SUPT20H C13|C13orf19|FAM48A|P38IP|SPT20 suppressor of Ty 20 homolog (S. cerevisiae) protein-coding 0.036364 0.405405 -143(CGTTGCTA,+,0.00),-124(CGTTGCTA,+,0.00) 561_WT_peak_1997-2 chr13 37633387 37633741 + 143 NA promoter-TSS (NM_001278482) promoter-TSS (NM_001278482) 60 NM_001278482 55578 Hs.435815 NM_017569 HPRD:10135 SUPT20H C13|C13orf19|FAM48A|P38IP|SPT20 suppressor of Ty 20 homolog (S. cerevisiae) protein-coding 0.093220 0.630986 -36(GGCGTCCA,-,0.00) 160(CGCCGCTA,+,0.00) -161(GAAAACCG,+,0.00),-58(CAACACCG,+,0.00) 136(ACCGCCCA,+,0.00) 156(GCCTCGCCGC,-,0.00) 1(CCGGCCTGCCGG,+,0.00) 561_WT_peak_6451 chr6 117002058 117002612 + 143 NA promoter-TSS (NM_002269) promoter-TSS (NM_002269) -32 NM_002269 3841 Hs.182971 NM_002269 HPRD:05179 KPNA5 IPOA6|SRP6 karyopherin alpha 5 (importin alpha 6) protein-coding 0.090253 0.630631 -102(GTCTACGGGCCG,-,0.00) 51(CTCCGCCGCC,-,0.00) 12(TCTACGCC,+,0.00),84(CGCGTCGA,-,0.00) -154(CGCACGCG,-,0.00) -18(TCGGTGGG,-,0.00) 170(GGTCGCTA,+,0.00) 318(CGGTTTTG,-,0.00),358(CGGTTTTT,-,0.00) 212(GTTACCCG,-,0.00),367(TTTACCCC,-,0.00) 54(CGCCGCCGCCGC,-,0.00),57(CGCCGCCGCCGC,-,0.00),60(CGCCGCCGCCGC,-,0.00),63(CGCCGCCGCCGC,-,0.00),66(CGCCGCCGCCGC,-,0.00),69(CGCCGCCGCCGC,-,0.00),72(CGCCGCCGCCGC,-,0.00),75(CGCCGCCGCCGC,-,0.00) 83(CCGCGTCG,-,0.00) 561_WT_peak_5275 chr3 141098254 141098496 + 143 NA intron (NM_001080412, intron 3 of 7) intron (NM_001080412, intron 3 of 7) 55320 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding 0.028926 0.493827 -31(CGGGCCTGGCTG,+,0.00) 561_WT_peak_4931 chr22 40859142 40859453 + 143 NA 5' UTR (NM_001282660, exon 1 of 12) 5' UTR (NM_001282660, exon 1 of 12) 147 NM_001282660 57591 Hs.654688 NM_020831 HPRD:10445 MKL1 BSAC|MAL|MRTF-A megakaryoblastic leukemia (translocation) 1 protein-coding 0.022508 0.487179 -86(CTTACGCG,-,0.00) -80(CGGCATGA,-,0.00) -46(GTCCGGCG,-,0.00) 561_WT_peak_5750 chr5 54357928 54358379 + 143 NA Intergenic Intergenic 38046 NM_002104 3003 Hs.277937 NM_002104 GZMK TRYP2 granzyme K (granzyme 3; tryptase II) protein-coding 0.017738 0.413717 -76(TCGGTCAG,-,0.00) 18(TCCTGCCG,+,0.00) -21(CAACACCG,+,0.00) 22(GCCGCCCA,+,0.00) 561_WT_peak_3063 chr17 18528925 18529171 + 143 NA promoter-TSS (NR_036647) promoter-TSS (NR_036647) -118 NR_036647 284047 Hs.448012 NR_036647 HPRD:08777 CCDC144B - coiled-coil domain containing 144B (pseudogene) pseudo 0.028455 0.611336 -134(GTGCGCCTGCCC,+,0.00) 561_WT_peak_3397 chr17 80255601 80256099 + 143 NA Intergenic Intergenic 19630 NM_006137 924 Hs.36972 NM_006137 HPRD:01732 CD7 GP40|LEU-9|TP41|Tp40 CD7 molecule protein-coding 0.048193 0.589178 81(GGAGGAGGAGGA,-,0.00) 250(CCTTCCGGCCCC,-,0.00) 77(CTGGGGAGGAGG,-,0.00),116(CCGGGAGGGGCG,-,0.00) 149(GGGCTGAGGCGG,-,0.00) -56(GAAACAGAAAAC,+,0.00) 561_WT_peak_3691 chr19 19709097 19709932 + 143 NA intron (NR_038198, intron 2 of 7) intron (NR_038198, intron 2 of 7) 20211 NM_025245 80714 Hs.466257 NM_025245 HPRD:16287 PBX4 - pre-B-cell leukemia homeobox 4 protein-coding 0.025150 0.486842 93(CTCGGCCTCC,-,0.00) 146(CAAAACTG,+,0.00),380(CAAAACGG,+,0.00) 381(AAAACGGCCC,-,0.00) 640(CCGAGTAG,-,0.00) 561_WT_peak_6038 chr5 178157428 178157880 + 143 NA promoter-TSS (NM_005649) promoter-TSS (NM_005649) 49 NM_005649 6940 Hs.484324 NM_005649 HPRD:03900 ZNF354A EZNF|HEL104|HKL1|KID-1|KID1|TCF17 zinc finger protein 354A protein-coding 0.121681 0.741722 -105(CTCGGCAGCC,-,0.00) 139(AGGCCGCT,+,0.00) -80(GCCGGGCG,+,0.00),97(CCCGCGGC,-,0.00) -84(CCGTGCCG,+,0.00) -102(GGCAGCCGCAGG,+,0.00) -12(GCCGCGCC,+,0.00) -17(CCCGGGCCGCGC,-,0.00),90(CGCTCACCCCGC,-,0.00) 45(CCCGGCTCCGCC,-,0.00) -14(GGGCCGCGCC,+,0.00),48(GGCTCCGCCC,-,0.00) 2(GCCGCGAGGC,+,0.00) 211(GGGTCCCGGCTG,+,0.00) 561_WT_peak_3345 chr17 73781239 73781755 + 143 NA promoter-TSS (NR_039892) promoter-TSS (NR_039892) 577 NM_001080419 85451 Hs.584768 NM_001080419 ENSG00000132478 UNK ZC3H5|ZC3HDC5 unkempt family zinc finger protein-coding 0.048450 0.564797 -126(CCCGGCCGCC,-,0.00),-123(GGCCGCCGAG,+,0.00) -61(TCGAGGCC,+,0.00) 246(GCGGAGCCTGAG,+,0.00) -134(AACTCGGTCC,-,0.00) 561_WT_peak_2553 chr15 75248580 75249019 + 143 NA exon (NM_017793, exon 1 of 1) exon (NM_017793, exon 1 of 1) 976 NM_017793 54913 Hs.8562 NM_017793 RPP25 - ribonuclease P/MRP 25kDa subunit protein-coding 0.127563 0.736364 187(TCGTCGCC,+,0.00) -129(CGCGTACG,+,0.00),-127(CGTACGCT,-,0.00) 78(CGCCCGGC,-,0.00) -51(CGGTTTTG,-,0.00),203(CGGCTTTG,-,0.00) 59(TTGACCCG,-,0.00) 74(ACCGCGCC,+,0.00) -2(GGCTGGCTGCGC,-,0.00),123(CCTCGGCCCCGC,-,0.00),139(CGCTGGCGCCTC,-,0.00) -114(AGCGCAGCCGCG,+,0.00) -87(CCGCCAGGCGGC,-,0.00) 561_WT_peak_4634 chr20 37504187 37504492 + 143 NA intron (NM_015568, intron 2 of 10) intron (NM_015568, intron 2 of 10) -50616 NM_030919 81610 Hs.726442 NM_030919 HPRD:12744 FAM83D C20orf129|CHICA|dJ616B8.3 family with sequence similarity 83, member D protein-coding 0.026230 0.539216 -1(ATGTGGCT,+,0.00),22(AGGTGGCT,+,0.00) 38(GCCGGGGG,+,0.00) -113(CAAAACCC,+,0.00) -95(CAAACAGGAAGC,+,0.00) 127(AACTGGGCCC,-,0.00) 561_WT_peak_1101 chr10 95462243 95462517 + 143 NA promoter-TSS (NM_145246) promoter-TSS (NM_145246) -51 NM_145246 118924 Hs.586650 NM_145246 HPRD:12319 FRA10AC1 C10orf4|F26C11.1-like|FRA10A fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 protein-coding 0.116788 0.680000 -63(ACTTCCGGTCCG,-,0.00),48(CGGCCCGGAAAG,+,0.00) 66(AGAGGCTT,-,0.00) 39(CGGGAGAAACGG,+,0.00) -56(GTCCGACA,-,0.00) -86(CCTACGGGTCCC,-,0.00) -126(CGCCGCCGCCGC,-,0.00),-123(CGCCGCCGCCGC,-,0.00),-120(CGCCGCCGCCGC,-,0.00),-117(CGCCGCCGCCGC,-,0.00),-114(CGCCGCCGCCGC,-,0.00) 90(CGCGGCTCCCAG,-,0.00) -54(CCGACACG,-,0.00) 561_WT_peak_7359 chr9 98486852 98487178 + 143 NA Intergenic Intergenic -150885 NM_001010895 375748 Hs.432364 NM_020207 HPRD:17362 ERCC6L2 BMFS2|C9orf102|RAD26L|SR278 excision repair cross-complementation group 6-like 2 protein-coding 0.012270 0.425076 -151(AGCCACAT,-,0.00) 561_WT_peak_1010 chr10 64564145 64564621 + 143 NA promoter-TSS (NM_032804) promoter-TSS (NM_032804) -133 NM_032804 84890 Hs.99821 NM_032804 HPRD:12566 ADO C10orf22 2-aminoethanethiol (cysteamine) dioxygenase protein-coding 0.077731 0.599581 -19(AAGTGGCT,+,0.00) 291(CGTGCGCG,-,0.00),295(CGCGTGCG,+,0.00),297(CGTGCGCG,-,0.00) -38(AGTGCCGGGA,-,0.00) 174(CGCCCGGC,-,0.00),215(GCCGGGCG,+,0.00) -126(CCCTCCCTGCCC,+,0.00) 245(TGCGCGGC,-,0.00),299(TGCGCGCT,-,0.00) 155(GCTCCGCAGG,-,0.00) 561_WT_peak_6525 chr6 155492389 155492881 + 143 NA intron (NM_012454, intron 8 of 25) intron (NM_012454, intron 8 of 25) -45462 NM_001010927 26230 Hs.586279 NM_012454 HPRD:05273 TIAM2 STEF|TIAM-2 T-cell lymphoma invasion and metastasis 2 protein-coding 0.010163 0.405680 166(CAAAACCA,+,0.00) 561_WT_peak_2783 chr16 30569462 30569749 + 143 NA promoter-TSS (NM_001172679) promoter-TSS (NM_001172679) 37 NM_033410 92595 Hs.132227 NM_033410 HPRD:10072 ZNF764 - zinc finger protein 764 protein-coding 0.083624 0.659722 22(GGCGTGGA,-,0.00) -152(GGGAGGGAGCGG,+,0.00) -144(GCGGGGCCAGAG,+,0.00) -130(GGCGCCATGGTA,+,0.00) 93(GCGGCGGCGC,+,0.00) 561_WT_peak_3641 chr19 12904410 12904953 + 143 NA TTS (NM_002229) TTS (NM_002229) 2371 NM_002229 3726 Hs.25292 NM_002229 HPRD:01303 JUNB AP-1 jun B proto-oncogene protein-coding 0.112339 0.759191 276(GGAGCGGGGCGA,-,0.00) 4(AGGCGGCT,+,0.00) -25(CCGGGAAGGGGG,-,0.00),-2(CCGGGCAGGCGG,-,0.00) 195(CCGACGCC,+,0.00) -17(GGGGCCGGGA,-,0.00) 301(TCCTGCCG,+,0.00),319(TCGGGCCG,+,0.00) 147(CGTCTGAC,+,0.00) -149(TTTCCCCG,-,0.00),-7(TTTTCCCG,-,0.00) 128(GCCGCGCC,+,0.00),362(CCCGCGCA,+,0.00) 234(GCGGCGCCCGCC,+,0.00) -32(CGCGGCGCCGGG,+,0.00),-32(CGCGGCGCCGGG,-,0.00) 232(GGGCGGCGCC,+,0.00) 123(GCCCCGCCGC,-,0.00) 561_WT_peak_2996 chr17 4870907 4871266 + 143 NA promoter-TSS (NM_004890) promoter-TSS (NM_004890) 46 NM_004890 9552 Hs.90436 NM_004890 HPRD:10247 SPAG7 ACRP|FSA-1 sperm associated antigen 7 protein-coding 0.069638 0.652778 37(TGACTGAGAGGG,-,0.00) 98(CGTCGGAG,+,0.00) -80(CGGTTGTG,-,0.00) 114(CCCTGGGCCCGC,-,0.00) 155(GTGCATGGCGGC,-,0.00) 561_WT_peak_1522 chr11 127909071 127909593 + 143 NA Intergenic Intergenic 482873 NM_005238 2113 Hs.369438 NM_005238 HPRD:01260 ETS1 ETS-1|EWSR2|p54 v-ets avian erythroblastosis virus E26 oncogene homolog 1 protein-coding 0.007663 0.403442 125(ATGTGGCT,+,0.00) 561_WT_peak_289 chr1 74663861 74664220 + 143 NA promoter-TSS (NM_001105659) promoter-TSS (NM_001105659) 144 NM_001199329 8790 Hs.480085 NM_003838 HPRD:06790 FPGT GFPP fucose-1-phosphate guanylyltransferase protein-coding 0.064067 0.580556 -88(GGCGCGGT,-,0.00) 561_WT_peak_3170 chr17 38375178 38375613 + 143 NA promoter-TSS (NM_133264) promoter-TSS (NM_133264) -179 NM_133264 147179 Hs.421622 NM_133264 HPRD:18304 WIPF2 WICH|WIRE WAS/WASL interacting protein family, member 2 protein-coding 0.048276 0.525229 202(TCCCCCGCCTCC,+,0.00) 108(AACCGCTT,-,0.00),160(ATGCGTCT,+,0.00) 97(GGCGTCCA,-,0.00) 222(CGCGGACG,+,0.00) 203(CCCCCGCC,-,0.00) 561_WT_peak_4864 chr22 29070174 29070392 + 143 NA intron (NM_001145418, intron 1 of 22) intron (NM_001145418, intron 1 of 22) 5570 NM_001145418 23331 Hs.387856 NM_015281 HPRD:10020 TTC28 TPRBK tetratricopeptide repeat domain 28 protein-coding 0.004587 0.342466 -123(AGAGGCTT,-,0.00) -58(TGGTTTTG,-,0.00) 561_WT_peak_854 chr10 4173844 4174217 + 143 NA Intergenic (A)n|Simple_repeat|Simple_repeat 80112 NR_120632 101927964 Hs.737041 NR_120632 ENSG00000236990 LOC101927964 - uncharacterized LOC101927964 ncRNA 0.000000 0.320856 -77(CAAAACCC,+,0.00) 561_WT_peak_340 chr1 100598377 100598899 + 143 NA promoter-TSS (NM_194292) promoter-TSS (NM_194292) -68 NM_019083 54482 Hs.729095 NM_019083 HPRD:07659 TRMT13 CCDC76 tRNA methyltransferase 13 homolog (S. cerevisiae) protein-coding 0.072797 0.583174 -58(GGAGGAGGCGGG,-,0.00) 11(TCTTCCGGTTCT,-,0.00) -21(AGAGACTT,-,0.00) 206(CGCACGCG,-,0.00) -128(GCCCGGCCCT,+,0.00) -59(CGGAGGAGGCGG,+,0.00) 16(CGGTTCTG,-,0.00),42(CGGTTGTG,-,0.00),265(CGGTTCTG,-,0.00) 112(GAGACCCGAAGG,+,0.00) 159(GACACCGGAAGC,+,0.00) 315(CGCTGGAGCCGC,-,0.00) 194(CCGCGACG,-,0.00) 561_WT_peak_1600 chr12 12325015 12325260 + 143 NA intron (NM_002336, intron 7 of 22) intron (NM_002336, intron 7 of 22) 60251 NR_036052 100302285 NR_036052 MIR1244-1 MIR1244|MIRN1244|hsa-mir-1244|hsa-mir-1244-1 microRNA 1244-1 ncRNA 0.004082 0.378049 561_WT_peak_1550 chr12 2986384 2986778 + 143 NA promoter-TSS (NM_021953) promoter-TSS (NM_021953) 216 NM_001252500 83695 Hs.198853 NM_001252499 HPRD:17487 RHNO1 C12orf32|RHINO RAD9-HUS1-RAD1 interacting nuclear orphan 1 protein-coding 0.093909 0.681013 -102(CTGGTAAGGCGG,-,0.00),-51(CCGGGGAGGGGC,-,0.00) 55(TCCTGCCG,+,0.00) -71(GGGAAGAAGTGG,+,0.00) -13(GCGAGCCGAGGG,+,0.00) -57(GTGGGGCCGGGG,+,0.00),40(CCCTGGGCCCGC,-,0.00) 45(GGCCCGCTTT,+,0.00) 561_WT_peak_4910 chr22 38244718 38245342 + 143 NA promoter-TSS (NM_001242923) promoter-TSS (NM_001242923) -349 NM_016091 51386 Hs.446852 NM_016091 HPRD:10932 EIF3L EIF3EIP|EIF3S11|EIF3S6IP|HSPC021|HSPC025|MSTP005 eukaryotic translation initiation factor 3, subunit L protein-coding 0.048077 0.515200 366(CTCGGCCTCC,-,0.00) 211(AAGCGACT,+,0.00),452(AGAGGCCT,-,0.00) 196(CCGCCTCCCGGG,+,0.00) 334(CCCCCGGC,-,0.00) 293(TAGAGACG,-,0.00) -121(TTTACTCG,-,0.00) 193(CCTCCGCCTCCC,-,0.00) 410(CGCGGCTCCTCT,-,0.00) 408(AACGCGGCTC,-,0.00) 235(CCGAGTAG,-,0.00),362(CCGCCTCG,-,0.00) 561_WT_peak_2702 chr16 14379642 14379955 + 143 NA Intergenic tRNA-Thr-ACG|tRNA|tRNA -18026 NR_030177 574455 NR_030177 miRBase:MI0003137 MIR193B MIRN193B microRNA 193b ncRNA 0.095847 0.627389 -35(GGCGTCGG,-,0.00) -115(GGGCGGGCGCAC,-,0.00) 65(TCTTGCCG,+,0.00) -33(CGTCGGTC,+,0.00) -56(GGCGCGGT,-,0.00) -99(GCGGCGCCAGGA,+,0.00) 561_WT_peak_5211 chr3 113465187 113465560 + 143 NA promoter-TSS (NM_025146) promoter-TSS (NM_025146) -253 NM_025146 80218 Hs.372378 NM_025146 HPRD:14350 NAA50 MAK3|NAT13|NAT13P|NAT5|NAT5P|SAN|hNAT5|hSAN N(alpha)-acetyltransferase 50, NatE catalytic subunit protein-coding 0.029491 0.483957 -93(GGGCTGGCTCGG,-,0.00) -113(CGCTTACG,+,0.00) -85(TCGGTAGG,-,0.00) -79(GGCCCTGGCGGT,-,0.00) 561_WT_peak_5986 chr5 150163269 150163477 + 143 NA intron (NM_032947, intron 1 of 1) intron (NM_032947, intron 1 of 1) 5865 NM_032947 85027 Hs.29444 NM_032947 HPRD:12212 SMIM3 C5orf62|MST150|NID67 small integral membrane protein 3 protein-coding 0.019231 0.459330 27(AGAGGCTT,-,0.00) 561_WT_peak_6098 chr6 11093738 11094336 + 142 NA promoter-TSS (NM_001135575) promoter-TSS (NM_001135575) -229 NM_001135575 221710 Hs.656600 NM_001135575 ENSG00000224531 SMIM13 C6orf228 small integral membrane protein 13 protein-coding 0.098662 0.669449 169(AAGCCGCT,+,0.00),170(AGCCGCTA,-,0.00) 110(CCGCGGAGGAGG,-,0.00) -48(CCGACTGA,+,0.00),-12(CCGCCCGA,+,0.00),327(CCGACCGC,+,0.00) 186(GCCGGGCG,+,0.00) 238(CAGCGACG,-,0.00) -51(CGTCCGAC,+,0.00),-50(GTCCGACT,-,0.00) -78(CGGCTTTG,-,0.00) 266(TGTACCCG,-,0.00) -16(AGAGCCGCCC,-,0.00) 4(GCAGCGAAGC,+,0.00) 395(GAGGCCCGCCTG,+,0.00) 561_WT_peak_6139 chr6 26033236 26033931 + 142 NA exon (NM_003513, exon 1 of 1) exon (NM_003513, exon 1 of 1) 213 NM_003513 8335 Hs.248174 NM_003513 HPRD:09105 HIST1H2AB H2A/m|H2AFM histone cluster 1, H2ab protein-coding 0.058993 0.517241 -78(AGGTGGCT,+,0.00) 252(GCGCGCCAGCCC,+,0.00) 330(CTGCACGA,-,0.00) -124(TGGGCGGC,-,0.00) 183(GGGCCGCATT,+,0.00),304(CACTCGGCCC,-,0.00) 561_WT_peak_2534 chr15 68569842 68570801 + 142 NA 5' UTR (NM_015322, exon 1 of 2) 5' UTR (NM_015322, exon 1 of 2) 180 NM_015322 10116 Hs.362733 NM_015322 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog b (C. elegans) protein-coding 0.105318 0.709375 517(CCGCCTTCCTCC,+,0.00),567(TCGGCCTCCTCT,+,0.00) 223(GGCGGACGAG,+,0.00),566(CTCGGCCTCC,-,0.00) 585(CCGCCTTCCCTG,+,0.00) 622(GGCGGCGA,-,0.00) 172(CCTACGCG,-,0.00),544(CGCGGACG,+,0.00),677(CGAACGCG,-,0.00) 26(CCGGTCGG,-,0.00) 83(TCCCGGCCCT,+,0.00) 76(CCTCTCCTCCCG,-,0.00),421(AGGAAGGAGGGG,+,0.00) 75(CCCTCTCCTCCC,+,0.00),646(GGGCTGTGAGGG,-,0.00) 222(CGGCGGAC,+,0.00) 62(CCTCCCGCTCCC,-,0.00) 530(TGCGCGGG,-,0.00),614(GGCGCGGC,-,0.00) 480(CCAGGGCCGGCG,+,0.00),617(GCGGCGGCGGCG,+,0.00),623(GCGGCGACGGCG,+,0.00) 312(GGGCCGGGTC,+,0.00),449(GGGCGGCGTC,+,0.00),679(AACGCGGCCT,-,0.00) 556(CTTCGCGG,+,0.00) 457(TCCGCCATGGAG,+,0.00),744(GCGGCCATGGAG,+,0.00),746(GGCCATGGAGGG,-,0.00) 754(AGGGCCTGGCTG,+,0.00) 561_WT_peak_3364 chr17 76210219 76210426 + 142 NA promoter-TSS (NM_001168) promoter-TSS (NM_001168) 45 NM_001012270 332 Hs.744872 NM_001168 HPRD:04520 BIRC5 API4|EPR-1 baculoviral IAP repeat containing 5 protein-coding 0.130435 0.730769 -98(GCCGCGGG,+,0.00),-52(CCCGCGGC,-,0.00) -54(GCCCCGCGGC,-,0.00) 561_WT_peak_6029 chr5 175788625 175788972 + 142 NA promoter-TSS (NM_001079685) promoter-TSS (NM_001079685) 12 NR_109799 57179 Hs.743257 NM_020444 HPRD:13839 KIAA1191 p60MONOX KIAA1191 protein-coding 0.089337 0.660920 -155(CGGCCCGGAGTC,+,0.00) -66(GGCGGCGA,-,0.00),115(TCGCCGCC,+,0.00) -143(CGGCACTA,-,0.00) 112(CCTTCGCCGCCC,-,0.00) 117(GCCGCCCA,+,0.00) 139(CGCAGCTCCGAG,-,0.00) 91(AGACCCGCCC,-,0.00) 112(CCTTCGCCGC,-,0.00) 561_WT_peak_3919 chr19 58094978 58095333 + 142 NA promoter-TSS (NM_001010879) promoter-TSS (NM_001010879) -473 NM_001010879 284307 Hs.454830 NM_001010879 HPRD:18321 ZIK1 ZNF762 zinc finger protein interacting with K protein 1 protein-coding 0.098592 0.651685 -110(AAGTCGCT,+,0.00),103(AGCGGCCT,-,0.00) -72(GGCCTCGA,-,0.00),-14(AGCGTCGA,-,0.00),151(GCGACGCC,+,0.00) 128(GCCCAGCCCT,+,0.00) -78(CGGCACGG,-,0.00),-42(GGGCACGA,-,0.00) 149(TGGCGACG,-,0.00) -161(GGCGCGGC,-,0.00) 70(CGCTCAGCCGCG,+,0.00) -161(GGCGCGGCCC,-,0.00) 77(CCGCGACG,-,0.00) 174(CAGCGCGGCCGC,-,0.00) 561_WT_peak_1390 chr11 67250636 67250881 + 142 NA intron (NM_003977, intron 1 of 5) CpG 253 NM_003977 9049 Hs.412433 NM_003977 HPRD:10408 AIP ARA9|FKBP16|FKBP37|SMTPHN|XAP-2|XAP2 aryl hydrocarbon receptor interacting protein protein-coding 0.073469 0.601626 -147(CCGGGAGGACGG,-,0.00) 59(TCGACGCT,+,0.00) -131(CAAAAACG,+,0.00) -120(GATACAGGAAGG,+,0.00) -23(CGAGGCGG,+,0.00) 561_WT_peak_5540 chr4 87927760 87928107 + 142 NA promoter-TSS (NM_005935) promoter-TSS (NM_005935) -220 NM_005935 4299 Hs.480190 NM_005935 HPRD:08871 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family, member 1 protein-coding 0.069164 0.626437 113(GGCCGCCGAG,+,0.00) 50(TCGGCGCC,+,0.00) 26(TCGGCCGG,-,0.00) -140(CGGTCTTG,-,0.00) 46(CTTGTCGG,+,0.00) 561_WT_peak_5995 chr5 156452243 156452592 + 142 NA Intergenic L2b|LINE|L2 33070 NM_001099414 26762 Hs.129711 NM_012206 HPRD:09404 HAVCR1 HAVCR|HAVCR-1|KIM-1|KIM1|TIM|TIM-1|TIM1|TIMD-1|TIMD1 hepatitis A virus cellular receptor 1 protein-coding 0.008596 0.482857 -35(ATGTGGCT,+,0.00) 167(AGGCCAGGGA,-,0.00) -87(GCTTCCTGCTGC,-,0.00) 561_WT_peak_6637 chr7 35749138 35749344 + 142 NA Intergenic Intergenic -6806 NR_108082 100506725 Hs.304253 NR_108082 ENSG00000227544 LOC100506725 - uncharacterized LOC100506725 ncRNA 0.014563 0.396135 -104(GAAACAGGAAAC,+,0.00) 561_WT_peak_185 chr1 38157760 38158106 + 142 NA promoter-TSS (NM_018101) promoter-TSS (NM_018101) -140 NM_018101 55143 Hs.524571 NM_018101 HPRD:13017 CDCA8 BOR|BOREALIN|DasraB|MESRGP cell division cycle associated 8 protein-coding 0.063584 0.654179 -98(AGCCGCCA,-,0.00),-18(AGCCGCCA,-,0.00) 61(AGGGCGGGGA,-,0.00) 170(CGGCAGGA,-,0.00) 65(CGGGGAAA,+,0.00) 36(GGCGGAGCCGGG,+,0.00) 35(GGGCGGAGCC,+,0.00) 102(CCGCGACG,-,0.00) -148(GGTCACGGCGGC,-,0.00),30(GGCCAGGGCGGA,-,0.00) -118(CAGCCAGGCCAG,-,0.00),113(GCGGCCTCGCTG,+,0.00) 561_WT_peak_791 chr1 231596408 231596670 + 142 NA Intergenic Intergenic 15732 NR_033826 645339 Hs.382049 NR_033826 SNRPD2P2 - small nuclear ribonucleoprotein D2 pseudogene 2 pseudo 0.007634 0.406844 561_WT_peak_1074 chr10 82295384 82295869 + 142 NA promoter-TSS (NR_120661) promoter-TSS (NR_120661) 72 NR_120661 101929574 Hs.593663 NR_120661 ENSG00000226659 LOC101929574 - uncharacterized LOC101929574 ncRNA 0.061856 0.627572 264(CCGCCCTCCACC,+,0.00) -36(CCTTCCGGGCCC,-,0.00),-30(GGGCCCGGAAGA,+,0.00) -13(CGTTCGCG,-,0.00) 261(CCCCCGCC,-,0.00) 126(CGGCGCGA,-,0.00) -25(CGGAAGAAACTG,+,0.00) 229(GCCGCCAGGGAG,+,0.00),275(CCCGCCAGGCCC,+,0.00) 201(GTTGCGAAGC,+,0.00) 561_WT_peak_1263 chr11 43890506 43890800 + 142 NA Intergenic Intergenic -11704 NM_139178 221120 Hs.720708 NM_139178 HPRD:16793 ALKBH3 ABH3|DEPC-1|DEPC1|PCA1 alkB, alkylation repair homolog 3 (E. coli) protein-coding 0.013605 0.420339 -28(ATGTGGCT,+,0.00) -133(TTCCTGCCCT,+,0.00) -16(TTTACCCC,-,0.00) -82(CCGAGAAG,-,0.00) 561_WT_peak_2007 chr13 41634753 41635032 + 142 NA promoter-TSS (NM_007187) promoter-TSS (NM_007187) -805 NM_007187 11193 Hs.411300 NM_007187 HPRD:16086 WBP4 FBP21 WW domain binding protein 4 protein-coding 0.046595 0.510714 -26(GAACCCGGGCCA,-,0.00) -32(GGAGTCGA,-,0.00) -84(CCAAACCG,+,0.00) 82(CCTTCGCCGC,-,0.00) 561_WT_peak_368 chr1 110880989 110881380 + 142 NA promoter-TSS (NM_022768) promoter-TSS (NM_022768) 609 NR_036595 440600 Hs.649375 NR_036595 ENSG00000227963 LOC440600 - uncharacterized LOC440600 ncRNA 0.104859 0.665816 -161(TCGCCCTGCTTC,+,0.00) -5(CCCCCGGC,-,0.00) 20(CAGCGACG,-,0.00) 123(GTACGACG,-,0.00) -58(GCGGGCCCAGGT,+,0.00),-43(CGCGGGCGGCGC,-,0.00) -40(GGGCGGCGCT,+,0.00),-16(GGGCGGGGCT,+,0.00) 561_WT_peak_7274 chr9 66553534 66553852 + 142 NA non-coding (NR_122076, exon 1 of 6) non-coding (NR_122076, exon 1 of 6) 218 NR_122077 403323 Hs.646340 NM_203449 LOC403323 - uncharacterized LOC403323 ncRNA 0.075472 0.614420 93(AGACGCCT,-,0.00) -108(GCGCCTTCCCCG,+,0.00) -150(CGCGTGCG,+,0.00) -142(CAGGTAAA,+,0.00) -157(GCTGCGACGC,+,0.00) 561_WT_peak_400 chr1 115605310 115605664 + 142 NA intron (NM_005725, intron 2 of 7) intron (NM_005725, intron 2 of 7) 26634 NM_005725 10100 Hs.310458 NM_005725 HPRD:18233 TSPAN2 NET3|TSN2|TSPAN-2 tetraspanin 2 protein-coding 0.016949 0.557746 -69(GGGCTGGTGCCC,-,0.00) 121(GAGGCCTTGCTG,+,0.00) 561_WT_peak_989 chr10 51371283 51371654 + 142 NA promoter-TSS (NM_003631) promoter-TSS (NM_003631) 89 NR_110767 100652748 Hs.499594 NM_001290117 ENSG00000204152 TIMM23B TIMM23|bA592B15.7 translocase of inner mitochondrial membrane 23 homolog B (yeast) protein-coding 0.105121 0.629032 100(GGAGGCGGGGGA,-,0.00) -91(GCTTCCGGGGCG,-,0.00) 173(CGCACGCG,-,0.00),197(CGCGTAAG,+,0.00) 103(GGCGGGGG,+,0.00) 105(CGGGGGAAGCGG,+,0.00) 120(CAAAACCA,+,0.00),179(CGGATTTG,-,0.00) 7(GTTACCCG,-,0.00) -98(GCTTCCAGCTTC,-,0.00) 104(GCGGGGGAAGCG,+,0.00) -156(GCGCCGCTTT,+,0.00) 561_WT_peak_5018 chr3 14989491 14989900 + 142 NA promoter-TSS (NR_046255) promoter-TSS (NR_046255) 253 NR_046251 100505641 Hs.517821 NR_046251 ENSG00000225733 FGD5-AS1 - FGD5 antisense RNA 1 ncRNA 0.105134 0.692683 -2(GGTGGAGGGGGA,-,0.00),34(TGGCCCTCCGCC,+,0.00),107(TCCTCCTCCTCC,+,0.00),110(TCCTCCTCCTCC,+,0.00) -110(CGCCCGGC,-,0.00),-62(CCCGCGGC,-,0.00),-56(GCCGGGCG,+,0.00) -71(CCCTCCCCGCCC,+,0.00),190(CCGTCGCAGCCC,+,0.00) 225(AGGGTAAA,+,0.00) -120(GCGGCGGCGGCG,+,0.00),14(CCGCGGCCCCGC,-,0.00) 15(CGCGGCCCCGCC,-,0.00) -85(GGGCCGCTCC,+,0.00) -117(GCGGCGGCGC,+,0.00),190(CCGTCGCAGC,-,0.00) -90(GGGCCGGGCCGC,-,0.00),-27(CCGGCCCGGCCG,+,0.00) 561_WT_peak_6271 chr6 31164849 31166120 + 142 NA promoter-TSS (NR_026791).3 promoter-TSS (NR_026791).3 -53 NR_026791 253018 Hs.659818 NR_026791 HPRD:13637 HCG27 bCX101P6.9|bPG299F13.9|bQB115I13.2 HLA complex group 27 (non-protein coding) ncRNA 0.061369 0.591981 817(AAACGCTT,-,0.00) 71(CCGCCTCCCGCG,+,0.00) 398(GGCGGCGA,-,0.00) 432(AGGCGGGCGCTG,-,0.00),512(GGGCTGAGGCTC,-,0.00) 130(CGCCTACG,+,0.00) 248(AGTGCCGGGA,-,0.00),841(GCCCCGCCCT,+,0.00) 1078(CGGAGCCGAAGA,+,0.00) 396(TGGGCGGC,-,0.00),495(TGGGCGGC,-,0.00) -89(CGCTGTCACCGC,-,0.00) 685(AGCTCCGCCC,-,0.00),840(AGCCCCGCCC,-,0.00) -97(CGAGGCGG,+,0.00),109(CCGAGTAG,-,0.00) 230(CCCGCCATGGTC,+,0.00),351(GACCATGGAGGC,-,0.00),756(GACCAGGGCGGG,-,0.00) 399(GCGGCGAAGC,+,0.00) 1045(CAGCCAGGCCTG,-,0.00) 561_WT_peak_5285 chr3 150125930 150126653 + 142 NA promoter-TSS (NM_014779) promoter-TSS (NM_014779) -497 NM_014779 9819 Hs.722470 NM_014779 HPRD:11101 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family, member 2 protein-coding 0.109267 0.712707 191(GCCTCCGGTCCC,-,0.00) 251(GGAGGCCGAG,+,0.00) 271(CCGCCCGCCCGC,+,0.00),393(CGGGGAGGGAGG,-,0.00),406(CCGCCTGCCCGC,+,0.00),430(CCGCCCGCCCGC,+,0.00) -79(ACGACGCC,+,0.00),268(TCGCCGCC,+,0.00) 14(GGGCTGCTGCTC,-,0.00) 462(CCCGCGGC,-,0.00) -83(CGTCACGA,-,0.00) 72(CGGAGGGAGCTG,+,0.00),506(CCGCTCCTTCCC,-,0.00) 47(CCATTTCAGCCC,+,0.00) 462(CCCGCGGCTCCC,-,0.00) 40(GGCGCGGC,-,0.00) 2(GCGGCGGCAGCG,+,0.00),36(CCCTGGCGCGGC,-,0.00),263(CGCCGTCGCCGC,-,0.00),541(CGCCGGCACCGG,-,0.00) 464(CGCGGCTCCCGG,-,0.00) -154(AGCCCCGCCC,-,0.00) -49(GCTGCGGCGC,+,0.00),8(GCAGCGGGGC,+,0.00) 181(CAGCCGGGGCGC,-,0.00) 561_WT_peak_5733 chr5 44809041 44809288 + 141 NA promoter-TSS (NR_109862) promoter-TSS (NR_109862) 137 NM_016640 10884 Hs.124165 NM_016640 HPRD:17597 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding 0.137652 0.681452 -162(GGGTCCGGAATC,+,0.00) -103(GTCCGAGG,-,0.00) -149(CGGGCAAA,+,0.00) -110(CTACGCGG,+,0.00),-67(CCGCCACG,-,0.00),-36(CGTCGCGG,+,0.00) -68(GCCGCCACGGCT,+,0.00) 561_WT_peak_2798 chr16 31724614 31724833 + 141 NA 5' UTR (NM_001130913, exon 1 of 5) 5' UTR (NM_001130913, exon 1 of 5) 173 NM_001130913 124411 Hs.528826 NM_001004300 HPRD:14026 ZNF720 - zinc finger protein 720 protein-coding 0.059361 0.618182 -129(AGGCGGCT,+,0.00) 20(GCGGTCGG,-,0.00) 25(CGGAAGCGGCGG,+,0.00) -138(GGGAGGCCAAGG,+,0.00) -128(GGCGGCTTCGCG,-,0.00) -134(GGCCAAGGCGGC,-,0.00) 561_WT_peak_3416 chr18 3261414 3261841 + 141 NA promoter-TSS (NM_001144944) promoter-TSS (NM_001144944) -484 NM_033546 103910 Hs.190086 NM_033546 HPRD:10095 MYL12B MLC-B|MRLC2 myosin, light chain 12B, regulatory protein-coding 0.065574 0.544393 231(AGCGGCCT,-,0.00) 130(TCGGCGCC,+,0.00) 218(CGGGTCAA,+,0.00) 244(GCCGCGCC,+,0.00) 12(CCCAGGCGCCGC,-,0.00) 5(GAATCCGCCC,-,0.00),16(GGCGCCGCCC,-,0.00),205(ATCGCGGCCC,-,0.00) 153(CTAGGCGG,+,0.00) 561_WT_peak_672 chr1 198904059 198904391 + 141 NA intron (NR_040073, intron 1 of 2) intron (NR_040073, intron 1 of 2) 2333 NR_040073 100131234 Hs.711077 NR_040073 MIR181A1HG - MIR181A1 host gene (non-protein coding) ncRNA 0.018072 0.408408 561_WT_peak_7253 chr9 36400526 36400797 + 141 NA promoter-TSS (NM_194329) promoter-TSS (NM_194329) 259 NM_194332 152006 Hs.333503 NM_022781 HPRD:11519 RNF38 - ring finger protein 38 protein-coding 0.118081 0.716912 -92(CTGGGCCGCC,-,0.00) -124(CCGCCCTGCCGG,+,0.00),30(CCTTCCTCCCGG,+,0.00) -31(CGTCCGCG,-,0.00) -56(CCCGCGGC,-,0.00) 39(CGGCACCA,-,0.00) 55(GCCGCGCC,+,0.00) -104(CGCGGATCCTCG,+,0.00),-104(CGCGGATCCTCG,-,0.00) -128(GGCTCCGCCC,-,0.00),53(GGGCCGCGCC,+,0.00) -157(GGCCGCGGCGGC,-,0.00) 561_WT_peak_563 chr1 156571061 156571481 + 141 NA promoter-TSS (NM_015590) promoter-TSS (NM_015590) 8 NM_182679 54865 Hs.193832 NM_015590 HPRD:13596 GPATCH4 GPATC4 G patch domain containing 4 protein-coding 0.057143 0.558195 31(CCATCTTCCCGG,+,0.00) 85(CGTCCGCG,-,0.00) 79(TAGAGACG,-,0.00) 48(CCGTTTTG,-,0.00),106(CGGTTTTT,-,0.00) -108(TGGGTAAA,+,0.00) 561_WT_peak_7451 chr9 132175726 132176047 + 141 NA Intergenic CpG -75053 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 - long intergenic non-protein coding RNA 963 ncRNA 0.105919 0.652174 -57(TCCCCCTCGTCC,+,0.00),-28(GGAGGAGGGGGA,-,0.00) -32(CCGGGGAGGAGG,-,0.00) 104(GCGCGCCAGCCG,+,0.00) -51(TCGTCCCG,+,0.00) 146(GTTGCCATGGCG,+,0.00) 117(GCCGGGAAGC,+,0.00) 110(CAGCCGAGCCGG,-,0.00) 561_WT_peak_5147 chr3 69129320 69129499 + 141 NA intron (NM_003968, intron 1 of 17) CpG-18676 115 NM_198195 9039 Hs.154320 NM_003968 HPRD:04413 UBA3 NAE2|UBE1C|hUBA3 ubiquitin-like modifier activating enzyme 3 protein-coding 0.117318 0.744444 -122(GGAGGGGGGCGA,-,0.00) -84(CCCGGGTGGCGG,-,0.00) -102(GGCGGGGG,+,0.00) -67(ACCGCCCA,+,0.00) 561_WT_peak_7378 chr9 104160481 104160997 + 141 NA promoter-TSS (NM_197977) promoter-TSS (NM_197977) 180 NM_019051 54534 Hs.288224 NM_019051 HPRD:14768 MRPL50 MRP-L50 mitochondrial ribosomal protein L50 protein-coding 0.048450 0.506770 218(TCGCGCCG,+,0.00) 78(CGTCCCTA,+,0.00) 133(TTTACCTG,-,0.00) 319(GCTTTCTTTTTC,-,0.00) 561_WT_peak_711 chr1 207997264 207997512 + 141 NA Intergenic (TC)n|Simple_repeat|Simple_repeat 5664 NR_026817 148696 Hs.125511 NM_001039568 LOC148696 - uncharacterized LOC148696 ncRNA 0.032258 0.542169 -78(TATCGACG,-,0.00) -15(CTCTCTCAGCTC,+,0.00) -149(CGGTGTTG,-,0.00) 66(GAGAGCCGGAGG,+,0.00) 561_WT_peak_2766 chr16 29637986 29638541 + 141 NA Intergenic L1MB7|LINE|L1 -13225 NR_002593 81893 Hs.677169 NM_031211 HPRD:13964 SLC7A5P1 DC49|LAT1-3TM|MLAS|hLAT1-3TM solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1 pseudo 0.018018 0.494604 -38(CCCCCGCC,-,0.00) 173(GGGCTGTGAAGG,-,0.00) -141(TGGTTTTG,-,0.00) 561_WT_peak_3295 chr17 61904806 61905036 + 141 NA promoter-TSS (NM_001199163) promoter-TSS (NM_001199163) 110 NM_017647 117246 Hs.463785 NM_017647 HPRD:17024 FTSJ3 EPCS3|SPB1 FtsJ homolog 3 (E. coli) protein-coding 0.100000 0.688312 -156(CGGCTCGGATGC,+,0.00) 0(TGGGTCGG,-,0.00) -51(GCGGAGCGAGCG,+,0.00) -54(GGTGCGGAGC,+,0.00) -78(GCGGCCCGGCAG,+,0.00) 561_WT_peak_6386 chr6 87861707 87862239 + 141 NA Intergenic CpG -3296 NM_015021 23036 Hs.485892 NM_015021 ENSG00000188994 ZNF292 Nbla00365|ZFP292|ZN-16|Zn-15|bA393I2.3 zinc finger protein 292 protein-coding 0.103383 0.690432 117(CCGCCATCCCCG,+,0.00),245(CCGCGCTCCCTG,+,0.00) 8(CGGACCGA,+,0.00),183(TGGGTCGG,-,0.00) 161(AGGGCGGGGC,-,0.00) -162(AAAAACCG,+,0.00) -100(GCGGCGGCGGCG,+,0.00),-97(GCGGCGGCGGCG,+,0.00),-90(CGGCGGCTCCGC,-,0.00),77(GCGGGGCAAGAG,+,0.00) -89(GGCGGCTCCGCG,-,0.00) 162(GGGCGGGGCT,+,0.00) -35(CTTGGCGG,+,0.00) -38(GGCCTTGGCGGG,-,0.00) 561_WT_peak_5784 chr5 67721038 67721278 + 140 NA Intergenic LTR33B|LTR|ERVL 132762 NM_001242466 5295 Hs.132225 NM_181504 HPRD:01381 PIK3R1 AGM7|GRB1|p85|p85-ALPHA phosphoinositide-3-kinase, regulatory subunit 1 (alpha) protein-coding 0.008333 0.435685 561_WT_peak_7402 chr9 117373375 117373639 + 140 NA promoter-TSS (NM_153045) promoter-TSS (NM_153045) -199 NM_153045 203197 Hs.522357 NM_153045 HPRD:12988 C9orf91 - chromosome 9 open reading frame 91 protein-coding 0.098485 0.667925 -79(AAGCCGCT,+,0.00) 6(CCGGCGTCCCGG,+,0.00),14(CCGGGGGGGCGC,-,0.00),68(CCCGGGAGGCGC,-,0.00) -97(GGGCTGGACCTC,-,0.00),16(GGGGGGGCGCTC,-,0.00) 60(GCCGCGGG,+,0.00) 83(CCCTCTTGGCCC,+,0.00) -18(GTCGGCTCCGCG,-,0.00) 37(AACGCGGCCT,-,0.00) 55(GCTCCGCCGC,-,0.00) 561_WT_peak_7513 chrX 23801364 23801656 + 140 NA exon (NM_002970, exon 1 of 6) exon (NM_002970, exon 1 of 6) 235 NR_027783 6303 Hs.28491 NM_002970 HPRD:02431 SAT1 DC21|KFSD|KFSDX|SAT|SSAT|SSAT-1 spermidine/spermine N1-acetyltransferase 1 protein-coding 0.058219 0.593857 46(AGGTGGCT,+,0.00) 91(TCGGCCGG,-,0.00) -142(GGGAGACGAATG,+,0.00) 561_WT_peak_5663 chr5 415600 415813 + 140 NA intron (NM_020731, intron 5 of 11) intron (NM_020731, intron 5 of 11) 27552 NM_138464 116349 Hs.446702 NM_138464 ENSG00000221990 C5orf55 - chromosome 5 open reading frame 55 protein-coding 0.061033 0.728972 28(TCGGGCGG,-,0.00) -159(GGGCCGAGTC,+,0.00),-125(GGGCCGAGTC,+,0.00) -71(GCTGGGAGGC,+,0.00) 561_WT_peak_7510 chrX 19765693 19766335 + 140 NA intron (NM_031892, intron 2 of 17) intron (NM_031892, intron 2 of 17) 51903 NM_001024666 30011 Hs.726365 NM_031892 HPRD:02301 SH3KBP1 CD2BP3|CIN85|GIG10|HSB-1|HSB1|MIG18 SH3-domain kinase binding protein 1 protein-coding 0.018692 0.534992 57(AGAGGCCT,-,0.00),258(AGCCACAT,-,0.00) 15(GGGCTGGCGCTT,-,0.00) 90(CAACACCG,+,0.00) 561_WT_peak_3411 chr18 682016 682238 + 140 NA intron (NM_001126123, intron 10 of 15) MamRep605|Unknown|Unknown -23787 NM_001012716 494514 Hs.274959 NM_001012716 HPRD:18668 TYMSOS C18orf56 TYMS opposite strand protein-coding 0.013514 0.448430 -64(ATGTGGCT,+,0.00),-53(AGCCACAT,-,0.00) 561_WT_peak_4179 chr2 86667682 86668139 + 140 NA promoter-TSS (NM_018433) promoter-TSS (NM_018433) -361 NM_018433 55818 Hs.557425 NM_018433 HPRD:11054 KDM3A JHDM2A|JHMD2A|JMJD1|JMJD1A|TSGA lysine (K)-specific demethylase 3A protein-coding 0.061269 0.517467 -63(TCCACGCC,+,0.00) 216(CCTACGCG,-,0.00) 205(TCGGTCGA,-,0.00) 127(TCCCTGCCCT,+,0.00) 6(CCTGCGCCTCCC,-,0.00) 183(CCGCCAAG,-,0.00),217(CTACGCGG,+,0.00) 561_WT_peak_6483 chr6 135818949 135819635 + 140 NA promoter-TSS (NM_001134830) promoter-TSS (NM_001134830) 353 NR_026805 100131814 Hs.734007 NR_026805 ENSG00000231028 LINC00271 C6orf217|NCRNA00271 long intergenic non-protein coding RNA 271 ncRNA 0.064140 0.544396 -84(GCGCCTGCCCGG,+,0.00),-22(CCGCCTCCCCGG,+,0.00) 268(GGCGTGGA,-,0.00) -86(CGGCGCCTGCCC,+,0.00) 73(TCCCCGCCCT,+,0.00) 71(TTTCCCCG,-,0.00) 42(TGCGCGGG,-,0.00),175(GCCGCCCA,+,0.00) -133(CCCCGTCCCCGC,-,0.00),-87(GCGGCGCCTGCC,+,0.00) -140(ACCGCGGCCC,-,0.00),172(GAAGCCGCCC,-,0.00) 561_WT_peak_420 chr1 143673258 143673517 + 140 NA promoter-TSS (NR_121646) promoter-TSS (NR_121646) -97 NR_121646 26860 NR_121646 RNU1-13P RNU1-71|RNU1P6|RNVU1-2|U1.1|U1P1|vU1.2 RNA, U1 small nuclear 13, pseudogene snRNA 0.069498 0.634615 -113(CCCGTACG,+,0.00),-111(CGTACGCC,-,0.00) -60(CCCTCCTAGCCC,+,0.00) -97(TTTACACG,-,0.00) -76(CCCGCGCA,+,0.00) -83(CGCTTGCCCCGC,-,0.00) 561_WT_peak_7618 chrX 135578995 135579341 + 140 NA promoter-TSS (NM_001163280) promoter-TSS (NM_001163280) -70 NM_001163280 27336 Hs.204475 NM_014500 HPRD:02282 HTATSF1 TAT-SF1|TATSF1|dJ196E23.2 HIV-1 Tat specific factor 1 protein-coding 0.127168 0.726225 159(CCGCCTCCCCGG,+,0.00) -104(TCGAAGCC,+,0.00),115(GGCGTCGA,-,0.00),119(TCGACGCG,+,0.00) 20(CCGGCCGA,+,0.00) -38(CGCCCGGC,-,0.00),66(GCCGCGGG,+,0.00) 174(TCGCGCCG,+,0.00) 98(CAAACCCG,+,0.00) 84(CCCTCGCCCCGC,-,0.00) -43(AAACCCGCCC,-,0.00) 561_WT_peak_1493 chr11 117103017 117103242 + 140 NA promoter-TSS (NM_207343) promoter-TSS (NM_207343) 112 NM_004716 9159 Hs.648612 NM_004716 PCSK7 LPC|PC7|PC8|SPC7 proprotein convertase subtilisin/kexin type 7 protein-coding 0.057778 0.601770 -82(ACCGCCATGGCC,+,0.00),-80(CGCCATGGCCCC,-,0.00) -32(CACCCAGGTCGC,-,0.00) 561_WT_peak_1681 chr12 49412206 49412818 + 140 NA promoter-TSS (NM_001206710) promoter-TSS (NM_001206710) 19 NM_001206710 5571 Hs.530862 NM_002733 HPRD:04118 PRKAG1 AMPKG protein kinase, AMP-activated, gamma 1 non-catalytic subunit protein-coding 0.081699 0.631321 124(CCGCCCTCCTGC,+,0.00),319(CCGCCCTCCCCC,+,0.00) 382(AGCCGCTT,-,0.00) -54(GCGGGGACGCGG,-,0.00),66(CGGCCCTCCCGG,+,0.00),319(CCGCCCTCCCCC,+,0.00) 229(GCGACGCC,+,0.00) 49(CAGCGCCAGCCC,+,0.00),55(CAGCCCCTGCCC,+,0.00) -70(CGCGTACG,+,0.00) 120(CCGACCGC,+,0.00) 63(GCCCGGCCCT,+,0.00) 163(CGCCCGGC,-,0.00) 202(GGCAGGCCCCGC,-,0.00) -49(GACGCGGCCC,-,0.00) 106(GCTCCACAGC,-,0.00),226(GCGGCGACGC,+,0.00) 561_WT_peak_280 chr1 67660229 67660674 + 140 NA intron (NM_144701, intron 4 of 10) intron (NM_144701, intron 4 of 10) 28282 NM_144701 149233 Hs.677426 NM_144701 HPRD:16249 IL23R - interleukin 23 receptor protein-coding 0.004494 0.295964 561_WT_peak_3713 chr19 31389808 31390002 + 140 NA Intergenic Intergenic 450285 NM_020856 57616 Hs.278436 NM_020856 HPRD:18351 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding 0.000000 0.441026 -136(CTGTTTTG,-,0.00) 561_WT_peak_6803 chr7 104656117 104656319 + 140 NA intron (NM_182931, intron 1 of 26) intron (NM_182931, intron 1 of 26) 1581 NM_018682 55904 Hs.592262 NM_018682 HPRD:10528 KMT2E HDCMC04P|MLL5|NKp44L lysine (K)-specific methyltransferase 2E protein-coding 0.019802 0.428571 561_WT_peak_7312 chr9 79186726 79186931 + 140 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA 71279 NM_001097636 2650 Hs.521568 NM_001490 HPRD:02669 GCNT1 C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding 0.117073 0.655340 -104(CCGGAAAGGCGG,-,0.00) -18(TGGGTCGG,-,0.00) 561_WT_peak_6929 chr8 11059002 11059282 + 140 NA promoter-TSS (NM_173683) promoter-TSS (NM_173683) -267 NM_173683 286046 Hs.657083 NM_173683 HPRD:12926 XKR6 C8orf21|C8orf5|C8orf7|XRG6 XK, Kell blood group complex subunit-related family, member 6 protein-coding 0.078571 0.690391 -153(GCTTCCGGGTAG,-,0.00) -39(GGCGGGGG,+,0.00) -17(CCCGCCAGGGCT,+,0.00) -96(GCTCCCCAGC,-,0.00) 561_WT_peak_2042 chr13 49079651 49079918 + 139 NA intron (NM_001286832, intron 5 of 9) intron (NM_001286832, intron 5 of 9) 27608 NM_001268 1102 Hs.652712 NM_001268 HPRD:04631 RCBTB2 CHC1L|RLG regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 protein-coding 0.026217 0.399254 -37(AGCGACAT,-,0.00) -38(TAGCGACA,-,0.00) 35(GGGCCACGTT,+,0.00) 561_WT_peak_258 chr1 59407704 59408016 + 139 NA Intergenic Intergenic -78288 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA 0.003205 0.418530 22(AACCACTT,-,0.00) 561_WT_peak_6162 chr6 26271144 26271686 + 139 NA exon (NM_003534, exon 1 of 1) exon (NM_003534, exon 1 of 1) 197 NM_003534 8355 Hs.247813 NM_003534 HPRD:11909 HIST1H3G H3/h|H3FH histone cluster 1, H3g protein-coding 0.071956 0.567219 -120(CTGCCCGGAAAC,+,0.00) -161(AGGCGGCT,+,0.00),227(AGCCGCCT,-,0.00),330(AGCCACTT,-,0.00) 141(TAGCGGCG,-,0.00),180(TAGCGATG,-,0.00) 250(TGCGCGGC,-,0.00) 156(CGCAGAGCCACG,+,0.00) 9(GCCTCGCAGG,-,0.00) 561_WT_peak_5534 chr4 84377061 84377420 + 139 NA promoter-TSS (NM_001297756) promoter-TSS (NM_001297756) 155 NM_001297770 51023 Hs.334772 NM_016067 MRPS18C MRP-S18-1|MRP-S18-c|MRPS18-1|S18mt-c|mrps18-c mitochondrial ribosomal protein S18C protein-coding 0.061281 0.536111 -37(CGGAACGA,-,0.00) 103(CGGGTAAA,+,0.00) -153(GCTGCGCA,+,0.00) 561_WT_peak_2445 chr15 41953745 41954243 + 139 NA intron (NM_001080541, intron 1 of 22) CpG 1384 NM_001080541 23269 Hs.187569 NM_001080541 ENSG00000174197 MGA MAD5|MXD5 MGA, MAX dimerization protein protein-coding 0.070281 0.575150 -6(ATGCGGCT,+,0.00) 100(CTGGGAAGGGGG,-,0.00) 323(TCGACGGC,+,0.00) 214(TCTGTCGG,-,0.00) 43(GGGCACGA,-,0.00),204(CGGCACGT,-,0.00) 99(GCTGGGAAGG,+,0.00) 55(GCGGCTAGGCTG,+,0.00) 561_WT_peak_6914 chr7 156432957 156433287 + 139 NA promoter-TSS (NM_001184996) promoter-TSS (NM_001184996) 226 NR_026865 129790 Hs.647014 NM_032625 HPRD:12908 C7orf13 MY040 chromosome 7 open reading frame 13 ncRNA 0.136364 0.743202 -86(GGCGGCTGAG,+,0.00) 129(CGTGCGCG,-,0.00) -52(GCCGGGGG,+,0.00),36(CCCGCGGC,-,0.00),53(CCCCCGCC,-,0.00),138(GGCGGGGG,+,0.00) -59(CAAAGCCG,+,0.00),71(CAAAAACG,+,0.00) 36(CCCGCGGCTCCC,-,0.00) 131(TGCGCGGG,-,0.00),156(TGCGCAGT,-,0.00) 134(GCGGGGCGGGGG,+,0.00),140(CGGGGGCCGGCG,+,0.00) -17(GGCTCGGCCC,-,0.00) -82(GCTGAGGAGC,+,0.00) 561_WT_peak_3481 chr18 32820979 32821236 + 139 NA intron (NM_001135178, intron 1 of 3) CpG 113 NM_001135178 84307 Hs.591061 NM_032347 HPRD:18335 ZNF397 ZNF47|ZSCAN15 zinc finger protein 397 protein-coding 0.097276 0.689922 56(AAGCGACT,+,0.00) -148(TGCGTACG,+,0.00),-146(CGTACGCG,-,0.00) -21(CGCCGGAC,+,0.00) -76(CTTCGCGG,+,0.00) 561_WT_peak_4909 chr22 38203705 38203935 + 139 NA promoter-TSS (NM_001171690) promoter-TSS (NM_001171690) -92 NM_001171690 23464 Hs.54609 NM_014291 HPRD:07602 GCAT KBL glycine C-acetyltransferase protein-coding 0.100000 0.705628 -85(AAGCCTCT,+,0.00) -32(CCGCCTCCCCGC,+,0.00) 49(CGTCCGCG,-,0.00) -132(TCCCTCCCCT,+,0.00) 26(CCCCCGGC,-,0.00) -59(GCCAGGCCCCGC,-,0.00) 19(AGCCCGGCCC,-,0.00) -62(CCCGCCAGGCCC,+,0.00) -61(CCGCCAGGCCCC,-,0.00),37(GCGACCAGGCTG,+,0.00) 561_WT_peak_6934 chr8 19330952 19331255 + 139 NA intron (NR_024040, intron 3 of 9) intron (NR_024040, intron 3 of 9) 128953 NM_001130518 55790 Hs.613729 NM_018371 HPRD:13114 CSGALNACT1 CSGalNAcT-1|ChGn|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding 0.000000 0.421053 93(TGGTTTTG,-,0.00) 561_WT_peak_784 chr1 228781731 228781963 + 139 NA intron (NR_037962, intron 1 of 2) CpG-2319 1190 NR_002834 574029 Hs.647777 NR_002834 DUSP5P1 DUSP5P dual specificity phosphatase 5 pseudogene 1 pseudo 0.077586 0.618026 45(GCCCGGCCCG,+,0.00) 44(AGCCCGGCCC,-,0.00) 20(GGCGCCTGGCTG,+,0.00),47(CCGGCCCGGCCG,+,0.00) 561_WT_peak_5689 chr5 35854078 35854352 + 139 NA Intergenic Intergenic -2762 NM_002185 3575 Hs.591742 NM_002185 HPRD:00893 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding 0.007299 0.447273 561_WT_peak_6984 chr8 38239959 38240726 + 139 NA promoter-TSS (NM_017778) promoter-TSS (NM_017778) -552 NM_017778 54904 Hs.434966 NM_017778 HPRD:06155 WHSC1L1 NSD3|pp14328 Wolf-Hirschhorn syndrome candidate 1-like 1 protein-coding 0.113429 0.691406 280(TCCCCCTCCCCC,+,0.00) 181(GGCTCCGGTTCC,-,0.00),396(CGGCCCGGAGGC,+,0.00) 146(CTCGGCCGTC,-,0.00) -157(TAGCGTCT,+,0.00) -65(CCGGGAAGCCGG,-,0.00),281(CCCCCTCCCCCG,+,0.00),418(CCGGGAGGACGA,-,0.00) -49(GGCGTGGA,-,0.00),239(GGCGTCGT,-,0.00) 433(CAGCGCCCGCCG,+,0.00) 122(AGGGCGGGGC,-,0.00) 214(GCCGGGGG,+,0.00),464(GCCGCGGG,+,0.00) 497(ACGTGCCG,+,0.00) 249(CCCTCTCAGCCC,+,0.00) 160(GTCCTACG,-,0.00) 227(CAAGACCG,+,0.00) -62(GGAAGCCGGAGG,+,0.00) 319(GCGGCGCCGGCT,+,0.00),363(CGCCGGCCCCGC,-,0.00) 510(CGCGGCTGCTCG,-,0.00) 475(CCGCGACG,-,0.00) 231(ACCGCCTTGGCG,+,0.00),233(CGCCTTGGCGTC,-,0.00) 456(GCCCCCCAGC,-,0.00) 561_WT_peak_4965 chr22 47187201 47187644 + 139 NA intron (NM_001284305, intron 1 of 12) intron (NM_001284305, intron 1 of 12) 17598 NM_001284305 25771 Hs.435044 NM_014346 HPRD:15474 TBC1D22A C22orf4|HSC79E021 TBC1 domain family, member 22A protein-coding 0.018059 0.484234 140(CAGGGCCAGCCG,+,0.00) 108(TCTTGCCG,+,0.00) 35(GGGGGCCAAAGG,+,0.00) 561_WT_peak_4433 chr2 201753669 201753903 + 138 NA promoter-TSS (NM_001136039) promoter-TSS (NM_001136039) 63 NM_032472 53938 Hs.121076 NM_032472 HPRD:15163 PPIL3 CYPJ peptidylprolyl isomerase (cyclophilin)-like 3 protein-coding 0.042735 0.493617 561_WT_peak_2902 chr16 74330667 74330978 + 138 NA exon (NM_002811, exon 1 of 7) exon (NM_002811, exon 1 of 7) 149 NM_002811 5713 Hs.440604 NM_002811 HPRD:01147 PSMD7 MOV34|P40|Rpn8|S12 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 protein-coding 0.096463 0.682692 -125(CGAACCGGAAGA,+,0.00) 127(GGCGGCCGCG,+,0.00) 133(CGCGGACG,+,0.00) -153(CGGAAGAAGGAG,+,0.00),-120(CGGAAGAAGAGG,+,0.00) -103(GGCCTGAAAGGG,-,0.00) -158(GGGAGCGGAAGA,+,0.00) 122(GGCGCGGC,-,0.00) 74(GCTGGGCCGGCG,+,0.00) 83(GCGGCGCAGC,+,0.00),83(GCGGCGCAGC,-,0.00) 561_WT_peak_5114 chr3 50611147 50611470 + 138 NA intron (NM_016173, intron 4 of 10) intron (NM_016173, intron 4 of 10) -2850 NM_001171741 51161 Hs.517860 NM_016210 HPRD:16654 C3orf18 G20 chromosome 3 open reading frame 18 protein-coding 0.003096 0.558642 10(GGGCTGGGGGTG,-,0.00) 561_WT_peak_3095 chr17 27220612 27220836 + 138 NA intron (NM_004475, intron 1 of 10) LTR2B|LTR|ERV1 3991 NM_004475 2319 Hs.514038 NM_004475 HPRD:00580 FLOT2 ECS-1|ECS1|ESA|ESA1|M17S1 flotillin 2 protein-coding 0.013393 0.422222 -66(AGGCCCGAAACC,+,0.00) -73(CAGCGCCAGGCC,+,0.00) 561_WT_peak_6196-2 chr6 27113634 27114612 + 138 NA promoter-TSS (NM_080596) promoter-TSS (NM_080596) 514 NM_080593 85236 Hs.437275 NM_080593 HPRD:13658 HIST1H2BK H2B/S|H2BFAiii|H2BFT|H2BK histone cluster 1, H2bk protein-coding 0.059305 0.514811 198(ATGTGGCT,+,0.00),343(AAGTGGCT,+,0.00),380(AGACGCTT,-,0.00) 695(TCTTGCCG,+,0.00) -135(GGGGTGAGGGGG,-,0.00) 437(CCTCGGAC,+,0.00) 108(GAGCCAGGAAGC,+,0.00) 561_WT_peak_6406 chr6 96969636 96970119 + 138 NA intron (NM_015323, intron 1 of 18) CpG 175 NM_015323 23376 Hs.149367 NM_015323 HPRD:11109 UFL1 KIAA0776|Maxer|NLBP|RCAD UFM1-specific ligase 1 protein-coding 0.091097 0.661157 -18(GGCGGCCGAC,+,0.00) -55(CCGTGATGGCGG,-,0.00),110(CCTGCATCCCGG,+,0.00) 102(CCCGCGGC,-,0.00) -137(TGCGCGGC,-,0.00) 261(GGCGCGCCCCGC,-,0.00) -158(GGGCGGAGCC,+,0.00) 232(GCCCCCCAGC,-,0.00) 561_WT_peak_5981 chr5 149380048 149380317 + 138 NA promoter-TSS (NM_001243253) promoter-TSS (NM_001243253) -11 NM_001243253 81789 Hs.169333 NM_030953 HPRD:18190 TIGD6 - tigger transposable element derived 6 protein-coding 0.115242 0.718519 -88(CTGGCCGGAAGC,+,0.00),46(GCTTCCGGTGCG,-,0.00) 40(CCGACCGC,+,0.00) -10(AGGGCTGGGC,-,0.00) -150(GGGCTGAGCGGC,-,0.00) 57(GCCGCGAGGGCC,+,0.00) 561_WT_peak_4905 chr22 37625999 37626251 + 138 NA intron (NM_002872, intron 5 of 6) intron (NM_002872, intron 5 of 6) 14214 NM_002872 5880 Hs.517601 NM_002872 HPRD:03628 RAC2 EN-7|Gx|HSPC022|p21-Rac2 ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) protein-coding 0.011905 0.588933 -39(GCTGGGGAGC,+,0.00) 561_WT_peak_153 chr1 32110035 32110397 + 138 NA promoter-TSS (NR_033688) promoter-TSS (NR_033688) 2 NR_033688 553115 Hs.470417 NM_012392 HPRD:10143 PEF1 ABP32|PEF1A penta-EF-hand domain containing 1 protein-coding 0.091160 0.650138 -140(CCGACGCC,+,0.00) -31(CAGCGCCAGCCT,+,0.00) 82(GCGACCGA,+,0.00) -81(CCCCCGCC,-,0.00) 36(CGACACGA,-,0.00) 154(CGGAGAAAGCGG,+,0.00) 17(GAGCGACG,-,0.00) -142(ATCCGACG,-,0.00),84(GACCGACG,-,0.00),184(CGTCGGGC,+,0.00) -145(TTTATCCG,-,0.00) -47(GCTGTGGAGC,+,0.00) 561_WT_peak_4699 chr20 55967913 55968342 + 138 NA intron (NM_183425, intron 2 of 2) intron (NM_183425, intron 2 of 2) 1673 NM_001291780 55544 Hs.236361 NM_017495 HPRD:15268 RBM38 HSRNASEB|RNPC1|SEB4B|SEB4D|dJ800J21.2 RNA binding motif protein 38 protein-coding 0.032634 0.632558 138(AAGCGGAT,+,0.00) -46(GGCGGGGG,+,0.00) 216(TCGTGCAG,+,0.00) -40(GGGCAGGGAGGG,-,0.00),120(GGCCTGGGAGGG,-,0.00) 16(GGCCATGGGGCC,-,0.00) 561_WT_peak_7547 chrX 49129739 49130075 + 138 NA intron (NM_033215, intron 1 of 3) intron (NM_033215, intron 1 of 3) 3601 NM_001184745 89801 Hs.433652 NM_033215 HPRD:15170 PPP1R3F HB2E|R3F protein phosphatase 1, regulatory subunit 3F protein-coding 0.011905 0.421365 130(TAGGTCGG,-,0.00) -105(GGGTGGAGAGGG,-,0.00) -127(CAAAACCT,+,0.00),-69(CGGTTTTA,-,0.00) -73(TGGGCGGT,-,0.00) -72(GGGCGGTTTT,+,0.00) 561_WT_peak_2429 chr15 38980917 38981166 + 138 NA Intergenic LTR8|LTR|ERV1 -7758 NM_207444 400359 Hs.448785 NM_207444 HPRD:13418 C15orf53 - chromosome 15 open reading frame 53 protein-coding 0.004016 0.416000 -111(GCCGGGGG,+,0.00) -115(TCTTGCCG,+,0.00) 561_WT_peak_7435 chr9 130788496 130788851 + 138 NA Intergenic Intergenic 40926 NM_197956 203245 Hs.373606 NM_197956 HPRD:12987 NAIF1 C9orf90|bA379C10.2 nuclear apoptosis inducing factor 1 protein-coding 0.030986 0.550562 -152(CCGTGCCG,+,0.00) 6(GAAAGAGGAGGC,+,0.00),87(GAAACAGGATGT,+,0.00) 561_WT_peak_285 chr1 68962525 68962757 + 138 NA exon (NM_001114120, exon 1 of 12) exon (NM_001114120, exon 1 of 12) 263 NM_017779 55635 Hs.445098 NM_017779 HPRD:10879 DEPDC1 DEP.8|DEPDC1-V2|DEPDC1A|SDP35 DEP domain containing 1 protein-coding 0.099138 0.648069 13(GGCGTCCA,-,0.00),22(GGCGGCGA,-,0.00) -152(CCGACCGA,+,0.00) -36(AGGCCCGGGA,-,0.00) 16(GTCCATGGCGGC,-,0.00) 23(GCGGCGAAGG,+,0.00) 561_WT_peak_5727 chr5 43120873 43121186 + 138 NA promoter-TSS (NR_123719) promoter-TSS (NR_123719) 26 NR_123719 7690 Hs.535804 NM_003432 ENSG00000172262 ZNF131 ZBTB35|pHZ-10 zinc finger protein 131 protein-coding 0.115016 0.694268 -67(GATTCCGGGCGG,-,0.00) -16(CGCGGCCGCC,-,0.00) -93(CGGGGAGGGCGC,-,0.00) 1(CCAACCGA,+,0.00) -58(CGGCCCGA,-,0.00) -94(GCGGGGAGGGCG,+,0.00),23(GCGGGGCCCGAG,+,0.00) -80(CTTCGCGG,+,0.00) 561_WT_peak_4818 chr21 47305982 47306537 + 138 NA intron (NM_020528, intron 1 of 13) intron (NM_020528, intron 1 of 13) 36384 NM_020528 54039 Hs.474049 NM_020528 HPRD:10534 PCBP3 ALPHA-CP3 poly(rC) binding protein 3 protein-coding 0.034234 0.638489 -63(GCCGCGGG,+,0.00),38(GCCGCGGG,+,0.00),139(GCCGCGGG,+,0.00),240(GCCGCGGG,+,0.00) 561_WT_peak_958 chr10 38692253 38692585 + 138 NA promoter-TSS (NR_027269) promoter-TSS (NR_027269) -639 NR_027269 285961 Hs.406568 NR_027269 SEPT7P9 CDC10L|SEPT7L|bA291L22.2 septin 7 pseudogene 9 pseudo 0.018072 0.495495 -100(CGCGGCCGAG,+,0.00) -20(GCCCCCCAGC,-,0.00) 561_WT_peak_4562 chr20 7999908 8000407 + 138 NA exon (NM_021156, exon 1 of 8) exon (NM_021156, exon 1 of 8) 236 NM_021156 56255 Hs.169358 NM_021156 TMX4 DJ971N18.2|PDIA14|TXNDC13 thioredoxin-related transmembrane protein 4 protein-coding 0.126253 0.732000 -143(CGGCCCGGCACC,+,0.00),-64(GCCACCGGGCCG,-,0.00) 256(CTCGCCCGCC,-,0.00) -9(CGGGGCGGGCGG,-,0.00) 119(TCGCCGCC,+,0.00),193(GGCGCCGA,-,0.00) 303(CGCCTACG,+,0.00) 197(CCGAGCGA,+,0.00) 313(TAGCGGCG,-,0.00) -10(CCGGGGCGGGCG,+,0.00) -147(CAAGCGGCCC,-,0.00) 207(CTTCTCGG,+,0.00) -144(GCGGCCCGGCAC,+,0.00),237(CGGCCGGCCCGC,-,0.00) 561_WT_peak_20 chr1 2187011 2187735 + 138 NA intron (NM_003036, intron 1 of 6) intron (NM_003036, intron 1 of 6) 27239 NM_003036 6497 Hs.656507 NM_003036 HPRD:01271 SKI SGS|SKV SKI proto-oncogene protein-coding 0.004144 0.500690 561_WT_peak_5536 chr4 84406445 84406612 + 138 NA promoter-TSS (NM_139076) promoter-TSS (NM_139076) -238 NM_139076 84142 Hs.334772 NM_139076 HPRD:08584 FAM175A ABRA1|CCDC98 family with sequence similarity 175, member A protein-coding 0.041916 0.494048 -156(AGGCCGCT,+,0.00),-91(AGCGACCT,-,0.00) -162(CCCGGAAGGCCG,-,0.00) 561_WT_peak_6338 chr6 44214876 44215435 + 138 NA intron (NM_001271972, intron 1 of 11) CpG 460 NM_007355 3326 Hs.509736 NM_007355 HPRD:06763 HSP90AB1 D6S182|HSP84|HSP90B|HSPC2|HSPCB heat shock protein 90kDa alpha (cytosolic), class B member 1 protein-coding 0.060823 0.567857 104(TCGGCGCC,+,0.00),233(GGCGTCGG,-,0.00) 218(CGGACGCG,-,0.00),322(CGGACGCG,-,0.00) 257(GGCGGGGG,+,0.00) 121(TAGCGAGG,-,0.00) 235(CGTCGGAG,+,0.00) 66(CGGTTTTC,-,0.00) 150(TGGGCGGC,-,0.00) 179(GCGCGGCCCGGG,+,0.00) 222(CGCGGCTACGGG,-,0.00) 561_WT_peak_1351 chr11 65190019 65191040 + 138 NA non-coding (NR_028272, exon 1 of 1) non-coding (NR_028272, exon 1 of 1) 260 NR_028272 283131 Hs.523789 NR_002802 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA 0.047992 0.629159 342(GGTGGAGGGGGA,-,0.00) 136(AAGTGGCT,+,0.00) 35(CCGGTGACGCGG,-,0.00),531(CCGGGAGGGCTA,-,0.00) 204(GGGCTGGGGGTG,-,0.00) 683(TCGCTCGG,-,0.00) 527(AGGGCCGGGA,-,0.00) 14(TCGTCCCG,+,0.00) 91(TAGCGACA,-,0.00) 528(GGGCCGGGAGGG,-,0.00) -163(CATTCGCCTCCC,-,0.00) 709(CCGGGCCCAGCC,+,0.00) 741(GGTGCGAAGC,+,0.00) 747(AAGCCAGGCCCC,-,0.00) 561_WT_peak_1259 chr11 43333408 43333793 + 138 NA promoter-TSS (NM_006595) promoter-TSS (NM_006595) 95 NM_006595 8539 Hs.435771 NM_006595 HPRD:16500 API5 AAC-11|AAC11 apoptosis inhibitor 5 protein-coding 0.098701 0.663212 -87(AGGCCGCT,+,0.00),-21(TGGCGGCT,+,0.00) 203(GGCCTGGCGCTC,-,0.00) -74(CGTGCGCG,-,0.00) -128(AAAAACCG,+,0.00) -32(TGCGCGGT,-,0.00) -122(CGCGGAGGCGCA,+,0.00),-47(GGCGCAGCCGCG,+,0.00) 41(CGAGGCGG,+,0.00) 211(GCTCCGCGGC,-,0.00) 561_WT_peak_2851 chr16 57278618 57278912 + 138 NA promoter-TSS (NM_012106) promoter-TSS (NM_012106) -273 NM_012106 23568 Hs.632873 NM_012106 HPRD:09808 ARL2BP BART|BART1|RP66 ADP-ribosylation factor-like 2 binding protein protein-coding 0.064626 0.532203 -97(AGCGACTT,-,0.00) 20(GGCTTCGA,-,0.00) 561_WT_peak_6563 chr7 149845 150079 + 138 NA non-coding (NR_108065, exon 1 of 2) non-coding (NR_108065, exon 1 of 2) 244 NR_108064 100507642 Hs.557780 NR_108064 LOC100507642 - uncharacterized LOC100507642 ncRNA 0.089744 0.731915 -28(GGAGCAGGGCGG,-,0.00) -2(AGCGGCCT,-,0.00) -158(GCGGGGACGCGG,-,0.00) -92(GCGGTCGG,-,0.00) -121(ACCGCCCTGGCC,+,0.00) -64(GCGACCAGGCTG,+,0.00) 561_WT_peak_536 chr1 153962981 153963601 + 138 NA promoter-TSS (NM_001030) promoter-TSS (NM_001030) 52 NM_001030 6232 Hs.546291 NM_001030 HPRD:04744 RPS27 MPS-1|MPS1|S27 ribosomal protein S27 protein-coding 0.058065 0.531401 315(GGCGGCCCAG,+,0.00) 341(GGCGGCGA,-,0.00) 340(GGGCGGCGAGGG,-,0.00),437(CCCTCTTAGCTC,+,0.00) 224(TTTACCCT,-,0.00) 324(GCTGCGCA,+,0.00) 316(GCGGCCCAGCTG,+,0.00) 561_WT_peak_3667 chr19 16197290 16197560 + 138 NA intron (NM_003290, intron 3 of 7) intron (NM_003290, intron 3 of 7) 10290 NM_003290 7171 Hs.631618 NM_003290 HPRD:11734 TPM4 HEL-S-108 tropomyosin 4 protein-coding 0.044444 0.549815 -36(GACACCGGGGCC,-,0.00) 40(AACCACTT,-,0.00) -132(CGGAAGAGGCTG,+,0.00) -32(CCGGGGCCAACG,+,0.00) 561_WT_peak_6219 chr6 27782847 27783298 + 138 NA promoter-TSS (NM_021066) promoter-TSS (NM_021066) 250 NM_003521 8342 Hs.182432 NM_003521 HPRD:04154 HIST1H2BM H2B/e|H2BFE|dJ160A22.3 histone cluster 1, H2bm protein-coding 0.064302 0.555310 146(GTCCGAGG,-,0.00) 561_WT_peak_179 chr1 36554346 36554754 + 138 NA promoter-TSS (NM_017825) promoter-TSS (NM_017825) 97 NM_017825 54936 Hs.18021 NM_017825 HPRD:12432 ADPRHL2 ARH3 ADP-ribosylhydrolase like 2 protein-coding 0.127451 0.738386 -134(GACTCCGGGCCG,-,0.00) -102(GGCGGCGGAG,+,0.00) 33(GGGCTGGCGCGG,-,0.00),75(TGGCTGGCGCGC,-,0.00) 216(GCCGGGCG,+,0.00) 181(CGGCACGC,-,0.00) -147(TGCGCGGC,-,0.00),-121(TGGGCGGC,-,0.00),38(GGCGCGGC,-,0.00) 211(GCGGGGCCGGGC,+,0.00) -145(CGCGGCGCCGCG,+,0.00),-145(CGCGGCGCCGCG,-,0.00),-137(CGCGACTCCGGG,-,0.00) -120(GGGCGGCGCT,+,0.00),38(GGCGCGGCCC,-,0.00) -108(GGGCCTGGCGGC,-,0.00),7(GGCGATGGCGGC,-,0.00) 69(GCTGCCTGGCTG,+,0.00) 561_WT_peak_6591 chr7 8174406 8174619 + 138 NA intron (NM_001276478, intron 12 of 13) intron (NM_001276478, intron 12 of 13) 127170 NM_022307 3382 Hs.487561 NM_004968 HPRD:00971 ICA1 ICA69|ICAp69 islet cell autoantigen 1, 69kDa protein-coding 0.000000 0.331776 561_WT_peak_1710 chr12 53773017 53773251 + 138 NA promoter-TSS (NM_138473) promoter-TSS (NM_138473) -845 NM_138473 6667 Hs.620754 NM_003109 HPRD:01796 SP1 - Sp1 transcription factor protein-coding 0.059829 0.561702 -162(AGCGACAT,-,0.00) -127(CCCGGGAGGGGG,-,0.00),-126(CCGGGAGGGGGG,-,0.00) 58(TGGCGACG,-,0.00) -136(GTCCGACC,-,0.00) 8(AAAGCGTCCC,-,0.00) 561_WT_peak_6196 chr6 27113484 27113536 + 138 NA intron (NM_080593, intron 1 of 1) intron (NM_080593, intron 1 of 1) 1127 NM_080593 85236 Hs.437275 NM_080593 HPRD:13658 HIST1H2BK H2B/S|H2BFAiii|H2BFT|H2BK histone cluster 1, H2bk protein-coding 0.038462 0.339623 561_WT_peak_1294 chr11 59318019 59318793 + 137 NA Intergenic Intergenic 36020 NM_001004711 390199 Hs.553757 NM_001004711 HPRD:17728 OR4D9 OR11-253 olfactory receptor, family 4, subfamily D, member 9 protein-coding 0.045220 0.468387 -144(TCGTCGCC,+,0.00) 349(CGCGTGCG,+,0.00) -143(CGTCGCCA,+,0.00) 409(GGACTGAAAGGG,-,0.00) -124(CAAAACCC,+,0.00),193(CAAAACCC,+,0.00) -47(CGTGTAAA,+,0.00),311(CGTGTAAA,+,0.00) -135(GCTTCCTGGTGC,-,0.00) 561_WT_peak_4695 chr20 52532232 52532609 + 137 NA Intergenic Intergenic -40172 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo 0.039788 0.563492 124(CCGGGAGGGCTC,-,0.00) -100(GCGGCCGGCCTG,+,0.00) 561_WT_peak_4849 chr22 21921966 21922455 + 137 NA non-coding (NR_046082, exon 1 of 4) non-coding (NR_046082, exon 1 of 4) 191 NR_046082 7332 Hs.108104 NM_003347 HPRD:04762 UBE2L3 E2-F1|L-UBC|UBCH7|UbcM4 ubiquitin-conjugating enzyme E2L 3 protein-coding 0.112474 0.728571 288(CGGGGAAGGCCC,-,0.00) 238(GGCGTCGT,-,0.00) 308(GAGCCCCTGCCC,+,0.00) 29(TTCCTGCCCT,+,0.00),156(GCCCGGCCCG,+,0.00) -147(CGCCCGGC,-,0.00),-46(GCCGGGCG,+,0.00) -121(GGGAAGGAGCAG,+,0.00) 240(CGTCGTTA,+,0.00) 148(GCCCCTCAGCCC,+,0.00),178(CACTCTCCGCCC,+,0.00) 272(CCAAACCG,+,0.00) 115(GGGAGCGCAAGG,+,0.00) -36(GGGCGGCGTC,+,0.00),155(AGCCCGGCCC,-,0.00) 193(GCTTGGCCGC,-,0.00) 561_WT_peak_1935 chr12 133656577 133657838 + 137 NA 5' UTR (NM_001300776, exon 1 of 4) 5' UTR (NM_001300776, exon 1 of 4) 418 NM_001300778 7699 Hs.181552 NM_003440 ZNF140 pHZ-39 zinc finger protein 140 protein-coding 0.080888 0.616482 453(GGACCCGGGTTC,+,0.00) 800(GAGCCCTCCCGG,+,0.00) 729(GCGACGCC,+,0.00),758(GGCGCCGA,-,0.00) 840(TCGGTCCG,-,0.00) 157(GGTCGCTA,+,0.00) -114(CGGTCTTG,-,0.00),84(CGGCTTTG,-,0.00) 259(CGGGGAAA,+,0.00) 1067(GGCGCGGC,-,0.00) 283(CGCGGGGTCGCG,+,0.00),414(CGGGGGGCCGCG,+,0.00),1018(CGCGGAGCGGGG,+,0.00) -96(GGGCCGCGGT,+,0.00),418(GGGCCGCGGT,+,0.00),517(GGGCCGCGAT,+,0.00),639(GGGCCGCATT,+,0.00),754(GGGCGGCGCC,+,0.00) 519(GCCGCGATGGCT,+,0.00) 356(GCTTGGCCGC,-,0.00),588(GCAGCGAGGC,+,0.00) 680(GCGGCCTGGTTG,+,0.00),1070(GCGGCCTAGCTG,+,0.00) 561_WT_peak_7468 chr9 135545212 135545582 + 137 NA promoter-TSS (NM_012204) promoter-TSS (NM_012204) -331 NM_012204 9329 Hs.656646 NM_012204 GTF3C4 KAT12|TFIII90|TFIIIC290|TFIIIC90|TFIIICDELTA general transcription factor IIIC, polypeptide 4, 90kDa protein-coding 0.118919 0.714286 -149(GAAGCCGGGTCA,-,0.00),45(CCTTCCGGGTCC,-,0.00) 96(CGGGGACGGCGG,-,0.00) 142(CCCCCGCC,-,0.00) 80(TCGTCCCG,+,0.00) 40(CCGCCCCTTCCG,-,0.00) 13(CGTGGGAC,+,0.00) 95(CCGGGGACGGCG,+,0.00) -129(CCGACTCG,-,0.00) -62(GCTGCCATGGTC,+,0.00) 177(GCGGCCTGGCAA,+,0.00) 561_WT_peak_2780 chr16 30483733 30484083 + 137 NA promoter-TSS (NM_002209) promoter-TSS (NM_002209) -75 NM_002209 3683 Hs.174103 NM_002209 HPRD:01079 ITGAL CD11A|LFA-1|LFA1A integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) protein-coding 0.005714 0.487179 89(CCTCCCTCCCCG,+,0.00) 561_WT_peak_3232 chr17 47022185 47022494 + 137 NA promoter-TSS (NM_007241) promoter-TSS (NM_007241) -185 NM_007241 11267 Hs.127249 NM_007241 SNF8 Dot3|EAP30|VPS22 SNF8, ESCRT-II complex subunit protein-coding 0.084142 0.651613 -143(CGCGCCGGAAGC,+,0.00),-84(CGGCCCGGCGAC,+,0.00),30(AGCCCCGGCAGC,+,0.00) -127(AGCCGCAT,-,0.00) 69(CGTAGGCG,-,0.00) -118(TCCTGCCG,+,0.00) 37(GCAGCCAAGGCC,+,0.00) -114(GCCGCGAGGC,+,0.00),-40(GCCTCGCGGC,-,0.00) 561_WT_peak_2689 chr16 9184874 9185146 + 137 NA promoter-TSS (NM_014117) promoter-TSS (NM_014117) -527 NM_014117 29035 Hs.221497 NM_014117 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding 0.077206 0.637363 61(TCAACGCC,+,0.00) -45(CCCGCGGC,-,0.00) -98(GGGAGCCCCAGG,+,0.00) 561_WT_peak_344 chr1 101644366 101644988 + 137 NA Intergenic Intergenic 57407 NR_104626 101928370 Hs.534209 NR_104626 LOC101928370 - uncharacterized LOC101928370 ncRNA 0.006431 0.353130 294(TGGGTAAA,+,0.00) 561_WT_peak_4757 chr21 26979614 26979834 + 137 NA promoter-TSS (NM_017446) promoter-TSS (NM_017446) 77 NM_017446 54148 Hs.420696 NM_017446 HPRD:11371 MRPL39 C21orf92|L39mt|MRP-L5|MRPL5|PRED22|PRED66|RPML5 mitochondrial ribosomal protein L39 protein-coding 0.086364 0.674208 45(CCGCCCTCCTCC,+,0.00) 39(CCTTCTCCGCCC,+,0.00) -145(CCCCGGCCCCGC,-,0.00) 561_WT_peak_1152 chr10 116697998 116698232 + 137 NA exon (NM_139169, exon 1 of 8) exon (NM_139169, exon 1 of 8) 163 NM_139169 142940 Hs.21187 NM_139169 HPRD:18229 TRUB1 PUS4 TruB pseudouridine (psi) synthase family member 1 protein-coding 0.089744 0.634043 -5(AGGACCGGATCC,+,0.00) 23(AGGCCGCT,+,0.00) 23(AGGCCGCTTT,+,0.00) 561_WT_peak_4936 chr22 41487795 41488160 + 137 NA promoter-TSS (NR_031694) promoter-TSS (NR_031694) -540 NR_031694 100302237 NR_031694 miRBase:MI0006428 MIR1281 MIRN1281|hsa-mir-1281 microRNA 1281 ncRNA 0.117808 0.762295 56(GCAGCCGGGCCG,-,0.00),61(CGGGCCGGCGTC,+,0.00) 152(CCCGGGGGGCGG,-,0.00) 67(GGCGTCGA,-,0.00),71(TCGACGCC,+,0.00) 11(GACCCCCAGCCC,+,0.00),158(GGGCGGGCGCTC,-,0.00) 107(CCCGCGGC,-,0.00),128(GCCGCGGG,+,0.00) -147(GGGGAGAGAGGG,-,0.00) 59(GCCGGGCCGGCG,+,0.00),100(CCCGCGCCCCGC,-,0.00) 105(GCCCCGCGGC,-,0.00) 57(CAGCCGGGCCGG,-,0.00) 561_WT_peak_2758 chr16 28874621 28874991 + 137 NA promoter-TSS (NM_001145795) promoter-TSS (NM_001145795) -272 NM_001145795 25970 Hs.15744 NM_015503 HPRD:12336 SH2B1 PSM|SH2B SH2B adaptor protein 1 protein-coding 0.075676 0.638814 37(GTTTCCGGTGCT,-,0.00) -105(CCGCCTCCCCGC,+,0.00),143(CCGGGAGGACGC,-,0.00) -153(GACCGCCTGCCC,+,0.00),-17(GGGCCGGCGCTC,-,0.00) -74(CCGCTTCTTTCC,-,0.00) -20(GCGGGGCCGGCG,+,0.00) 561_WT_peak_2201 chr14 50468298 50469341 + 137 NA intron (NM_001012706, intron 1 of 3) intron (NM_001012706, intron 1 of 3) 5419 NM_001012706 283551 Hs.660867 NM_001012706 HPRD:13397 C14orf182 - chromosome 14 open reading frame 182 protein-coding 0.010547 0.476054 59(GCTGCCGGGCCA,-,0.00) 62(GCCGGGCCAGCA,+,0.00) 561_WT_peak_3472 chr18 23806212 23806735 + 137 NA promoter-TSS (NM_001293725) promoter-TSS (NM_001293725) -374 NR_121653 6875 Hs.369519 NM_005640 ENSG00000141384 TAF4B SPGF13|TAF2C2|TAFII105 TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa protein-coding 0.122371 0.698473 13(CGCGTGCG,+,0.00),15(CGTGCGCG,-,0.00),85(CGCGTAGG,+,0.00),318(CGCGGACG,+,0.00) 282(TCGGGCGG,-,0.00) 132(GGCGGGGG,+,0.00) 350(TCCTGCCG,+,0.00) 32(CGTGGCTA,+,0.00),168(GAGCGACG,-,0.00) -20(CGGGGAAA,+,0.00) 183(GGGAGCCGCAAG,+,0.00) -60(GGCGCGGC,-,0.00),144(GCTGCGCA,+,0.00),146(TGCGCAGT,-,0.00) -58(CGCGGCTCCGCT,-,0.00) 64(GCGGCGGGGC,+,0.00),133(GCGGGGGAGC,+,0.00),200(GCTCCCCCGC,-,0.00),203(CCCCCGCAGC,-,0.00) 3(GCGGCCTGGGCG,+,0.00) 561_WT_peak_5204 chr3 112280167 112280774 + 137 NA promoter-TSS (NM_017945) promoter-TSS (NM_017945) 340 NM_001278712 64422 Hs.477126 NM_022488 HPRD:10654 ATG3 APG3|APG3-LIKE|APG3L|PC3-96 autophagy related 3 protein-coding 0.092257 0.674342 -3(AGCCACTT,-,0.00) 301(CCGCGAGGGAGG,-,0.00) 199(CGGGACGA,-,0.00) -114(CGGAGAAAGCGG,+,0.00) 273(CGACGGAC,+,0.00) 317(CGGGGCCGAAGG,+,0.00) 62(GGCCGGCCCCGC,-,0.00) 70(CCGCGACG,-,0.00),135(CCGACTCG,-,0.00),270(CCGCGACG,-,0.00) 313(GCAGCGGGGC,+,0.00) 262(CAGGCAGCCCGC,-,0.00) 561_WT_peak_148 chr1 29063083 29063783 + 137 NA promoter-TSS (NM_001172828) promoter-TSS (NM_001172828) -19 NM_001172828 51441 Hs.532286 NM_016258 HPRD:06587 YTHDF2 HGRG8|NY-REN-2 YTH domain family, member 2 protein-coding 0.117143 0.694722 113(CCGCCCGCCTCC,+,0.00),295(TCCGCCTGCTCC,+,0.00) -148(AACCGGCT,+,0.00) -30(GCGGGGAGGCCG,-,0.00),33(CTCCCTTCCCGG,+,0.00) 351(TCGCCGCC,+,0.00),360(TCGCCGCC,+,0.00),511(GGCGTCGT,-,0.00) 155(GGGCGGGCGCGC,-,0.00) 419(GCCCGGCCCG,+,0.00),469(AGGCCCGGGC,-,0.00) 51(TCGCGCCG,+,0.00),99(TCGCGCCG,+,0.00) 178(TAGAGACG,-,0.00) 259(GTCCGCCG,-,0.00) 166(CGCGTAAA,+,0.00) 96(CGCTCGCGCCGC,-,0.00),105(CGCGCGCGCCGC,-,0.00),327(CGCCGCCGCCGC,-,0.00),355(CGCCGTCGCCGC,-,0.00) 214(CCGAGTCG,-,0.00),215(CGAGTCGG,+,0.00),463(CCGACTAG,-,0.00) 353(GCCGCCGTCGCC,+,0.00),382(AGCCATGTCGGC,-,0.00) 561_WT_peak_4298 chr2 131099856 131100238 + 137 NA promoter-TSS (NM_032357) promoter-TSS (NM_032357) -91 NM_032357 84317 Hs.104203 NM_032357 HPRD:14428 CCDC115 ccp1 coiled-coil domain containing 115 protein-coding 0.049738 0.514360 123(AGCCGCTA,-,0.00) 86(TCAGTCGG,-,0.00) 98(CGGTTTTT,-,0.00) 561_WT_peak_4673 chr20 48329937 48330216 + 137 NA intron (NM_004776, intron 1 of 8) CpG 345 NM_004776 9334 Hs.370487 NM_004776 HPRD:06807 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 protein-coding 0.103943 0.717857 -85(CCGCCTCCCGGC,+,0.00) -25(GAGCGGCAGCCG,+,0.00) -157(AGGGCAGGAA,-,0.00) 16(GCCGGGCG,+,0.00) 90(GGCGCGGC,-,0.00) 561_WT_peak_316 chr1 90460711 90461145 + 136 NA promoter-TSS (NR_002830) promoter-TSS (NR_002830) 250 NM_182976 284695 Hs.306221 NM_181781 HPRD:15774 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding 0.126728 0.714943 62(GGGCCCGGAGGC,+,0.00) 73(CCGCCCGCCCGC,+,0.00),77(CCGCCCGCCCCG,+,0.00) -117(TCGCCGCC,+,0.00),145(TCGGCGCC,+,0.00) 217(GGGCTGGAGCCC,-,0.00) -126(CGCGGACG,+,0.00) -161(TCGGTCGC,-,0.00) -94(TAGCGCCG,-,0.00) -82(GGCCGACG,-,0.00) 60(GCGGGCCCGGAG,+,0.00),78(CGCCCGCCCCGG,-,0.00),86(CCGGGCCCAGCG,+,0.00) -89(CCGCCAAG,-,0.00) -90(GCCGCCAAGGCC,+,0.00),233(CTCGCCTTGGCC,+,0.00) 561_WT_peak_1207 chr11 10562532 10562881 + 136 NA promoter-TSS (NR_046375) promoter-TSS (NR_046375) 68 NM_016422 50862 Hs.44685 NM_016422 HPRD:11509 RNF141 ZFP26|ZNF230 ring finger protein 141 protein-coding 0.100287 0.714286 145(CCTACCGA,+,0.00) 89(AGCCCCGCCC,-,0.00) -162(GCGGCGGGGC,+,0.00),-126(GCTCGGCAGC,-,0.00),-41(GCCGCGGAGC,+,0.00),158(GCTCCGCAGC,-,0.00) 561_WT_peak_7267 chr9 44245294 44245674 + 136 NA Intergenic Intergenic -139101 NR_121564 101927827 Hs.738704 NR_121564 ENSG00000229311 LOC101927827 - uncharacterized LOC101927827 ncRNA 0.044737 0.564304 -22(AAGCCGCT,+,0.00) -87(CGCCCGGC,-,0.00) -82(GGCCAGGGCTGC,-,0.00) 561_WT_peak_2106 chr13 113864212 113864548 + 136 NA exon (NM_001008895, exon 2 of 20) exon (NM_001008895, exon 2 of 20) 561 NM_001008895 8451 Hs.339735 NM_003589 HPRD:07218 CUL4A - cullin 4A protein-coding 0.127976 0.750742 -107(TCTCCCTCCGCC,+,0.00) -83(CTCGGCTGCC,-,0.00),34(GGCGGCCGGG,+,0.00) 86(GGGCGGCCGCTC,-,0.00) 156(AGGGCCGGGA,-,0.00) 83(GCCGGGCG,+,0.00) -42(CTGCACGA,-,0.00) 54(CCGCTCCTGCCC,-,0.00) 122(GGGAGCGGAAAG,+,0.00) -146(CTACGCGG,+,0.00),-134(CTTCGCGG,+,0.00),-53(CGTGGCGG,+,0.00),-37(CGAGGCGG,+,0.00) -135(GCTTCGCGGC,-,0.00),103(GCCTCGCAGG,-,0.00) 80(GCGGCCGGGCGG,+,0.00) 561_WT_peak_3037 chr17 8124112 8124415 + 136 NA non-coding (NR_026951, exon 3 of 3) non-coding (NR_026951, exon 3 of 3) 3098 NR_026951 284029 Hs.121692 NM_173621 HPRD:08755 LINC00324 C17orf44|NCRNA00324 long intergenic non-protein coding RNA 324 ncRNA 0.052805 0.476974 -29(CGCCACGA,-,0.00) -48(GTCAGACG,-,0.00) 26(GGGCGGACTT,+,0.00) 561_WT_peak_758 chr1 226890977 226891524 + 136 NA intron (NM_002221, intron 2 of 7) CpG -28481 NR_103784 100506443 Hs.664293 NR_103784 ITPKB-IT1 - ITPKB intronic transcript 1 (non-protein coding) ncRNA 0.104205 0.693431 -103(GGCGCCGGAGTC,+,0.00),-21(GATTTCGGGCAG,-,0.00) 123(CCGGGGAGGGGG,-,0.00),176(ACGGGAAGGCGG,-,0.00) 267(TGGCTTGCGCTC,-,0.00) -61(CCGCCCGA,+,0.00) -28(GGCGGGGG,+,0.00),116(CCCGCGGC,-,0.00) -59(GCCCGACG,-,0.00) -33(GGCGCGGC,-,0.00),98(GCCGCCCA,+,0.00) 561_WT_peak_3177 chr17 40021385 40021701 + 136 NA promoter-TSS (NM_018143) promoter-TSS (NM_018143) 86 NM_018143 55175 Hs.592134 NM_018143 HPRD:13924 KLHL11 - kelch-like family member 11 protein-coding 0.113924 0.694006 -75(AGGCCCGAAGTC,+,0.00) -42(CTCGGCGGCC,-,0.00),33(CGCGGCCGCC,-,0.00) 66(AGCCGCCA,-,0.00),114(ATGCGGCT,+,0.00) 76(TTGACGCC,+,0.00) 88(CGCCCGGC,-,0.00) -61(CCGTGCCG,+,0.00),-30(TCCTGCCG,+,0.00),107(CGGAACGA,-,0.00) -50(CCTCGGAC,+,0.00) -26(GCCGAGCCGGCG,+,0.00),39(CGCCGCCGCCGC,-,0.00),42(CGCCGCCGCCGC,-,0.00),45(CGCCGCCGCCGC,-,0.00) 561_WT_peak_6163 chr6 26273206 26273986 + 136 NA TTS (NM_003525) TTS (NM_003525) 392 NM_003525 8346 Hs.553506 NM_003525 HPRD:11903 HIST1H2BI H2B/k|H2BFK histone cluster 1, H2bi protein-coding 0.053846 0.550576 415(GGAGGCCGAG,+,0.00) 120(AAACGGCT,+,0.00) -50(CGTGTACG,+,0.00) 372(TCGGCCGG,-,0.00) 375(GCCGGGCG,+,0.00) 225(TGGGTAAA,+,0.00) 421(CGAGGCGG,+,0.00) 561_WT_peak_5034 chr3 20081248 20081495 + 136 NA promoter-TSS (NM_003884) promoter-TSS (NM_003884) -153 NM_003884 8850 Hs.533055 NM_003884 HPRD:06780 KAT2B CAF|P/CAF|PCAF K(lysine) acetyltransferase 2B protein-coding 0.048583 0.677419 -45(CGCGGAGGGGGG,-,0.00) 55(GGCGGGCGAG,+,0.00) 70(GGTGTCGA,-,0.00) 49(CCCCCTGGCGGG,-,0.00) 561_WT_peak_1934 chr12 133613777 133614201 + 136 NA promoter-TSS (NM_001289972) promoter-TSS (NM_001289972) 117 NM_003428 7637 Hs.445019 NM_003428 HPRD:15891 ZNF84 HPF2 zinc finger protein 84 protein-coding 0.141509 0.689412 242(CGGGGGAGGCGC,-,0.00) 214(GGCCCGGCGCTG,-,0.00) -127(CGGACGCG,-,0.00),4(TGTACGCG,-,0.00),18(CGCGTGCG,+,0.00),105(CGCGTGCG,+,0.00),107(CGTGCGCG,-,0.00) 54(TCCCGGCCCG,+,0.00) 151(GCCGCGGG,+,0.00),240(GGCGGGGG,+,0.00) 51(TCGTCCCG,+,0.00) 90(GGCCGACG,-,0.00) 96(CGGTTTGG,-,0.00) 109(TGCGCGGG,-,0.00) 211(GCGGGCCCGGCG,+,0.00) 145(CGCGAGGCCGCG,+,0.00),167(CGCGACTCGGCG,-,0.00) 46(CCGACTCG,-,0.00),169(CGACTCGG,+,0.00) 561_WT_peak_5196 chr3 108308108 108308778 + 136 NA promoter-TSS (NM_020890) promoter-TSS (NM_020890) 48 NM_020890 57650 Hs.591308 NM_020890 HPRD:11151 KIAA1524 CIP2A|p90 KIAA1524 protein-coding 0.073134 0.603577 279(GGAGAAGGGGGA,-,0.00) 232(CCGTGAAGGCGA,-,0.00) 136(GGGGTCGA,-,0.00) 69(CCGGTCGG,-,0.00) 461(GGCCTGGGAGGG,-,0.00) -107(CGGCTTTG,-,0.00) -17(ACCGCCCA,+,0.00) 175(AGCTGCCCCCGC,-,0.00) 471(GGGCCTCGTT,+,0.00) -39(GCGGCCCGGCTT,+,0.00),459(GCGGCCTGGGAG,+,0.00) 561_WT_peak_3847 chr19 49469046 49469401 + 136 NA intron (NM_000146, intron 2 of 3) CpG-14126 657 NM_000146 2512 Hs.433670 NM_000146 HPRD:00616 FTL LFTD|NBIA3 ferritin, light polypeptide protein-coding 0.078873 0.589888 -66(GGCGGCCGCG,+,0.00) -161(ATGTGGCT,+,0.00),-141(AGCCACTT,-,0.00) 5(CGTGCGCG,-,0.00) 112(TCGTGCAG,+,0.00) -139(CCACTTCTTCCG,-,0.00) 159(TAGGGACG,-,0.00) -78(CAAAACCA,+,0.00),69(CGGTCTTG,-,0.00) -69(CGTGGCGG,+,0.00) 561_WT_peak_1630 chr12 25541222 25541561 + 136 NA Intergenic Intergenic -137526 NM_033360 3845 Hs.505033 NM_004985 HPRD:01817 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|KI-RAS|KRAS1|KRAS2|NS|NS3|RASK2 Kirsten rat sarcoma viral oncogene homolog protein-coding 0.011799 0.423529 -42(CTGGTAAA,+,0.00) 561_WT_peak_111 chr1 25291401 25291946 + 136 NA promoter-TSS (NM_001031680) promoter-TSS (NM_001031680) -172 NM_001031680 864 Hs.170019 NM_004350 HPRD:02565 RUNX3 AML2|CBFA3|PEBP2aC runt-related transcription factor 3 protein-coding 0.040367 0.593407 -21(GGCGGCCGGG,+,0.00) 324(AAGCGGTT,+,0.00) -17(GCCGGGGG,+,0.00) 17(CCCGCGCA,+,0.00) 151(GGGCCGCGGT,+,0.00),299(CACGCGGCCC,-,0.00) 26(GGCCCTGGAGGC,-,0.00) -121(GCTCCGAAGC,+,0.00) 561_WT_peak_2929 chr16 82957965 82958363 + 136 NA intron (NM_001220490, intron 2 of 12) intron (NM_001220490, intron 2 of 12) 65739 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA 0.020101 0.423559 -60(CGGTTTTC,-,0.00) 196(GTCACCATGGCC,+,0.00) -39(GCTGCGGTGC,+,0.00) 561_WT_peak_5745 chr5 53607615 53607767 + 136 NA Intergenic Intergenic -1288 NM_019087 54622 Hs.659125 NM_019087 HPRD:12471 ARL15 ARFRP2 ADP-ribosylation factor-like 15 protein-coding 0.026316 0.392157 -29(CAAAACAG,+,0.00) -44(TTTACCTG,-,0.00) 561_WT_peak_3162 chr17 37975592 37975884 + 136 NA intron (NM_001257409, intron 2 of 5) intron (NM_001257409, intron 2 of 5) -41260 NM_001284516 22806 Hs.371680 NM_012481 IKZF3 AIO|AIOLOS|ZNFN1A3 IKAROS family zinc finger 3 (Aiolos) protein-coding 0.003425 0.402730 561_WT_peak_222 chr1 46049722 46050286 + 136 NA intron (NM_001195193, intron 1 of 12) CpG 344 NM_002482 4678 Hs.319334 NM_002482 HPRD:04423 NASP FLB7527|PRO1999 nuclear autoantigenic sperm protein (histone-binding) protein-coding 0.083333 0.656637 215(CGCGGCCGCC,-,0.00) 297(GCCGGGAGGCGG,-,0.00),298(CCGGGAGGCGGG,-,0.00) 189(CGGCTGGCGCCC,-,0.00) 184(GCGGTCGG,-,0.00) 230(GCCGGGGG,+,0.00) 226(TCTTGCCG,+,0.00) 253(CCTTCGCCTGCC,-,0.00) -41(CGCCGTCGCCGC,-,0.00),199(CCCCTGCCCCGC,-,0.00),231(CCGGGGGCAGCG,+,0.00) 166(CGCGCAGCAGCG,+,0.00) -15(CCGACAAG,-,0.00) -65(GGCCATGGAGTC,-,0.00),-43(GCCGCCGTCGCC,+,0.00),309(GGCCCTGGCGCG,-,0.00) -34(GCCGCGGAGC,+,0.00) 561_WT_peak_1134 chr10 104192146 104192486 + 136 NA 5' UTR (NM_024040, exon 1 of 9) 5' UTR (NM_024040, exon 1 of 9) 107 NM_024040 79004 Hs.500874 NM_024040 HPRD:13099 CUEDC2 C10orf66|bA18I14.5 CUE domain containing 2 protein-coding 0.088235 0.683284 -100(TCGGACGG,-,0.00),-23(TCCGTCGG,-,0.00) -51(GCCGGGGG,+,0.00) -139(GTCCGACG,-,0.00),-102(CATCGGAC,+,0.00),-21(CGTCGGGC,+,0.00) -15(GCGCCGCCGGCG,+,0.00) 124(GGGCGGAGCT,+,0.00) 84(CGTGGCGG,+,0.00) 79(GGCGCCGTGGCG,+,0.00),81(CGCCGTGGCGGC,-,0.00) 561_WT_peak_2907 chr16 75109140 75109588 + 136 NA intron (NM_032268, intron 1 of 4) intron (NM_032268, intron 1 of 4) 41306 NM_194436 197257 Hs.380929 NM_153486 HPRD:06318 LDHD DLD lactate dehydrogenase D protein-coding 0.024554 0.525612 -147(GGCAGCCGAAGT,+,0.00) 561_WT_peak_4437 chr2 201991119 201991361 + 136 NA intron (NM_001127183, intron 1 of 9) LTR6B|LTR|ERV1 -6448 NM_001202518 8837 Hs.390736 NM_003879 HPRD:04671 CFLAR CASH|CASP8AP1|CLARP|Casper|FLAME|FLAME-1|FLAME1|FLIP|I-FLICE|MRIT|c-FLIP|c-FLIPL|c-FLIPR|c-FLIPS CASP8 and FADD-like apoptosis regulator protein-coding 0.008264 0.460905 561_WT_peak_4682 chr20 49545925 49546269 + 136 NA intron (NM_015339, intron 1 of 4) intron (NM_015339, intron 1 of 4) -1424 NR_110009 101927631 Hs.301898 NR_110007 ENSG00000259456 ADNP-AS1 - ADNP antisense RNA 1 ncRNA 0.023256 0.492754 51(TTTAGCCG,-,0.00) -80(GGGCCCATTT,+,0.00) -50(GCTGTGAAGC,+,0.00),64(GCTGCGGTGC,+,0.00) 561_WT_peak_7027 chr8 59465754 59466815 + 136 NA intron (NM_001007070, intron 1 of 8) intron (NM_001007070, intron 1 of 8) 556 NM_001007068 6386 Hs.200804 NM_005625 HPRD:03741 SDCBP MDA-9|ST1|SYCL|TACIP18 syndecan binding protein (syntenin) protein-coding 0.059378 0.565913 56(AGCCGTTT,-,0.00),859(ATCCGCTT,-,0.00) -82(GGCGGCGA,-,0.00),77(GCGACGCC,+,0.00) 197(GGGCTGGGGCTG,-,0.00),203(GGGCTGGGGCTG,-,0.00),209(GGGCTGGGGCTG,-,0.00),215(GGGCTGGGGCTG,-,0.00),221(GGGCTGGGGCTG,-,0.00),267(CAGCCCCCGCCC,+,0.00) 270(CCCCCGCC,-,0.00) 161(TCCTGCCG,+,0.00) 263(CCTTCAGCCCCC,-,0.00) -87(GCGGCGGCGGCG,+,0.00) 94(GGGGGCTCCGCG,-,0.00),167(CGCGACCCCGCG,-,0.00) -49(GGCCAAGGGGGC,-,0.00) 74(GCGGCGACGC,+,0.00) 243(GAGGCCCGGCTG,+,0.00) 561_WT_peak_6447 chr6 116600449 116601103 + 136 NA promoter-TSS (NM_001080976) promoter-TSS (NM_001080976) 504 NM_003309 7259 Hs.458358 NM_003309 TSPYL1 TSPYL TSPY-like 1 protein-coding 0.082569 0.650382 -71(TCAGCCTCCGCC,+,0.00),175(CCCCCCTCCTCT,+,0.00) 47(AAGCGGCT,+,0.00),370(AGGCCGCT,+,0.00) 72(AGGCTGGCCCTC,-,0.00) 24(GCGGTCGG,-,0.00),301(TCGCTCGG,-,0.00) -61(CCCCCGCC,-,0.00),154(CCCGCGGC,-,0.00) -130(CCCTCTCAGCCA,+,0.00) 390(AGTCGGAC,+,0.00) 92(CGGCTTTG,-,0.00) 458(ACCGCCCA,+,0.00) 451(CGCTCGCACCGC,-,0.00) 232(CCCGGCTCCGCC,-,0.00),269(CGCGGAGCCTCA,+,0.00) 145(CCGCCACG,-,0.00) 144(ACCGCCACGGCC,+,0.00) 52(GCTGCCAGGC,+,0.00) 365(CATCCAGGCCGC,-,0.00) 561_WT_peak_1768 chr12 72233566 72233944 + 136 NA intron (NR_027449, intron 1 of 15) intron (NR_027449, intron 1 of 15) 268 NR_027449 64786 Hs.284630 NM_022771 HPRD:15470 TBC1D15 RAB7-GAP TBC1 domain family, member 15 protein-coding 0.050265 0.562005 105(AGAGGCTT,-,0.00),140(AGGTGGCT,+,0.00) 70(CAGCTAGGCCTC,-,0.00) 561_WT_peak_2282 chr14 74035863 74036657 + 136 NA exon (NM_006821, exon 1 of 3) exon (NM_006821, exon 1 of 3) 497 NM_006821 10965 Hs.446685 NM_006821 HPRD:10173 ACOT2 CTE-IA|CTE1A|MTE1|PTE2|PTE2A|ZAP128 acyl-CoA thioesterase 2 protein-coding 0.105793 0.671698 490(CCTCCCGCCCGG,+,0.00) 106(GGCGGCGA,-,0.00) 290(GAGCGCGCGCCC,+,0.00) 169(CGTGCGCG,-,0.00) 616(CCCCCGCC,-,0.00) 473(CGGCACGA,-,0.00),506(CGGCGCGA,-,0.00),549(TCCTGCCG,+,0.00) 171(TGCGCGGC,-,0.00),258(ACCGCGCC,+,0.00),306(TGGGCGGC,-,0.00) 505(GCGGCGCGAGCC,+,0.00) 316(CTTCGCGG,+,0.00) 107(GCGGCGACGC,+,0.00),532(GGTGCGAGGC,+,0.00) 5(GCGTCCCGGCTG,+,0.00) 561_WT_peak_1700 chr12 51632640 51632944 + 136 NA intron (NM_001136266, intron 1 of 3) CpG 284 NM_001136267 9802 Hs.369761 NM_014764 HPRD:08463 DAZAP2 PRTB DAZ associated protein 2 protein-coding 0.085526 0.636066 -145(GCGACGCC,+,0.00) -150(CGTCCGCG,-,0.00) 85(TCCAGGCCCT,+,0.00) -147(CCGCGACG,-,0.00) 561_WT_peak_978 chr10 43904383 43904597 + 136 NA promoter-TSS (NM_001098205) promoter-TSS (NM_001098205) -158 NM_001098205 3185 Hs.808 NM_004966 HPRD:03023 HNRNPF HNRPF|OK/SW-cl.23|mcs94-1 heterogeneous nuclear ribonucleoprotein F protein-coding 0.098131 0.711628 -163(CAGCGCCTGCCC,+,0.00) -145(CGCACGCG,-,0.00) 36(AGGAAGACGCGG,+,0.00) -80(CCGGCTCAGCCC,+,0.00) -139(CGGCTTTG,-,0.00) -123(CCTCCTGCTCCC,-,0.00) 11(CGGTGGCCCCCC,-,0.00) -98(CCGACTAG,-,0.00) -108(GAGCCAGGCCCC,-,0.00) 561_WT_peak_1967 chr13 27705393 27705707 + 136 NA intron (NR_046547, intron 1 of 2) MIRc|SINE|MIR 5880 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA 0.012739 0.419048 141(TGGTTTTG,-,0.00) 561_WT_peak_1765 chr12 70636828 70637438 + 136 NA promoter-TSS (NR_120459) promoter-TSS (NR_120459) 7 NR_120461 101928062 Hs.568059 NR_120459 ENSG00000257815 LINC01481 - long intergenic non-protein coding RNA 1481 ncRNA 0.101639 0.664484 -157(AGCCACCT,-,0.00),82(AGCGGCCT,-,0.00) 337(CCCGCAAGGCGG,-,0.00) 0(TCGGTGGG,-,0.00) 398(TCCCGGCCCA,+,0.00) 313(GGCGGGGG,+,0.00),344(GGCGGGGG,+,0.00) 122(CGTCGCTC,+,0.00),161(GAGCGACG,-,0.00),229(CGTCGCCA,+,0.00) -117(CCTCGGAC,+,0.00),384(GTCCGCCG,-,0.00) 110(CCGTTTTG,-,0.00) 189(AGGGTAAA,+,0.00) 133(CCTTCCGCTGCC,-,0.00) 410(GCTTCCCGTTGC,-,0.00) 302(GCGGGGCGCGCG,+,0.00) 80(AAAGCGGCCT,-,0.00) 171(GGTCACGGCGGC,-,0.00) -94(TCTGCGAAGC,+,0.00),299(GCAGCGGGGC,+,0.00) 83(GCGGCCTGCCTA,+,0.00) 561_WT_peak_7095 chr8 103110094 103110387 + 136 NA intron (NM_001040624, intron 1 of 7) intron (NM_001040624, intron 1 of 7) 26322 NM_001040624 83988 Hs.492427 NM_032041 HPRD:09466 NCALD - neurocalcin delta protein-coding 0.017065 0.479592 561_WT_peak_4934 chr22 41346682 41347158 + 136 NA promoter-TSS (NM_014248) promoter-TSS (NM_014248) -431 NM_014248 9978 Hs.474949 NM_014248 RBX1 BA554C12.1|RNF75|ROC1 ring-box 1, E3 ubiquitin protein ligase protein-coding 0.092437 0.700210 39(TGGCTCGGAAGC,+,0.00) -127(GGCGGGCGAG,+,0.00) 252(GGCGGCGA,-,0.00),258(GACGTCGA,-,0.00) 2(GGGCCCCAGCCC,+,0.00) 100(GCCGCGGG,+,0.00),232(GCCGGGGG,+,0.00) 195(CGGAGGAAGCAG,+,0.00) -121(CGAGTAAA,+,0.00) 126(CCGGGAGCCGCG,+,0.00) -130(CTTGGCGG,+,0.00),141(CGACTCGG,+,0.00) 93(GGGGCAGGCCGC,-,0.00) 561_WT_peak_3483 chr18 32923901 32924489 + 136 NA intron (NM_006965, intron 1 of 3) CpG 231 NM_006965 7572 Hs.514802 NM_006965 HPRD:01921 ZNF24 KOX17|RSG-A|ZNF191|ZSCAN3|Zfp191 zinc finger protein 24 protein-coding 0.086735 0.665535 4(GGGGGAGGGGGA,-,0.00) 361(GCTTCCGGTCTG,-,0.00) 143(GCGCCTCCCGGG,+,0.00) -25(GGCCTCGA,-,0.00) 346(CCCCCGGC,-,0.00) 141(CCGCGCCTCCCG,-,0.00) 94(CCCTCCCCGCCC,+,0.00) -149(CGTCGGAA,+,0.00) -10(CAAAACCG,+,0.00) -94(CCCGCGCA,+,0.00) -33(GACGCCAGGGCC,+,0.00) 178(GCTTCCCCGC,-,0.00) 561_WT_peak_2011 chr13 42031287 42031529 + 136 NA promoter-TSS (NM_014059) promoter-TSS (NM_014059) -134 NM_014059 28984 Hs.507866 NM_014059 HPRD:17970 RGCC C13orf15|RGC-32|RGC32|bA157L14.2 regulator of cell cycle protein-coding 0.111570 0.695473 -153(CACCGCCAGCCA,+,0.00) 22(CGGGTAAA,+,0.00) -10(GGGCCGGGTT,+,0.00) 561_WT_peak_3661 chr19 15489949 15490512 + 136 NA TTS (NM_001291478) TTS (NM_001291478) 382 NM_005858 10270 Hs.594496 NM_005858 HPRD:05258 AKAP8 AKAP 95|AKAP-8|AKAP-95|AKAP95 A kinase (PRKA) anchor protein 8 protein-coding 0.124334 0.751773 184(CCGCCCGCCTCC,+,0.00),187(CCCGCCTCCTCG,+,0.00) 83(GGGGCCGGAAGG,+,0.00) 188(CCGCCTCCTCGG,+,0.00) -46(CCCGCGGC,-,0.00) 315(CGGGACGA,-,0.00) 19(TAGCGCCG,-,0.00),233(GAGCGACG,-,0.00) -163(CCCGCGCAGCCC,+,0.00) -155(GCCCGACG,-,0.00),-19(GTCCGACC,-,0.00) 115(CAAAAACG,+,0.00) 45(GGAAGAGGAAGC,+,0.00) -163(CCCGCGCA,+,0.00),343(TGCGCAGC,-,0.00) -63(GCGGCCCCCGCG,+,0.00),258(GCGGCGCGCGCG,+,0.00) -99(CACGGCCCCGCG,-,0.00),220(CGCAGAGCCCCG,+,0.00) 6(AGCTCCGCCC,-,0.00),117(AAAACGGCCC,-,0.00) -135(GGCGCCCTGGGC,+,0.00),199(GGGCCTGGCGGC,-,0.00),268(CGCGCCCTGGCC,+,0.00),270(CGCCCTGGCCGC,-,0.00) 384(GCTCCGCACC,-,0.00) 198(GGGGCCTGGCGG,+,0.00),269(GCGCCCTGGCCG,+,0.00) 561_WT_peak_772 chr1 228750462 228750649 + 136 NA Intergenic CpG -29839 NR_037962 58480 Hs.647774 NM_021205 HPRD:06965 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding 0.058824 0.569149 -1(GGCGCCTGGCTG,+,0.00) 561_WT_peak_6741 chr7 86781777 86782287 + 136 NA 5' UTR (NM_021145, exon 1 of 20) 5' UTR (NM_021145, exon 1 of 20) 162 NM_021145 9988 Hs.196129 NM_021145 HPRD:09770 DMTF1 DMP1|DMTF|MRUL|hDMP1 cyclin D binding myb-like transcription factor 1 protein-coding 0.082353 0.671233 181(GGCTGCCGAG,+,0.00) 41(TCGGCGCC,+,0.00) 133(AGGGCCGGGC,-,0.00),273(TGGGCCGGGA,-,0.00) 136(GCCGGGCG,+,0.00),206(GGCGGGGG,+,0.00) -80(CAAAACAG,+,0.00) -79(AAAACAGGAAGT,+,0.00) 61(GCGGGGTCGGAG,+,0.00) -31(GGGCCGCTCC,+,0.00),59(GGGCGGGGTC,+,0.00) -38(GCCGCCAGGGCC,+,0.00),-36(CGCCAGGGCCGC,-,0.00),113(CCGGCCAGGGCC,+,0.00) 561_WT_peak_902 chr10 17470814 17471075 + 135 NA intron (NM_001004470, intron 2 of 7) intron (NM_001004470, intron 2 of 7) 25310 NM_001004470 338596 Hs.677766 NM_001004470 ST8SIA6 SIA8F|SIAT8F|ST8SIA-VI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 protein-coding 0.019157 0.488550 -24(ATGTGGCT,+,0.00) 561_WT_peak_6726 chr7 75405973 75406180 + 135 NA intron (NM_006072, intron 1 of 3) L1ME3A|LINE|L1 12988 NM_006072 10344 Hs.131342 NM_006072 HPRD:05262 CCL26 IMAC|MIP-4a|MIP-4alpha|SCYA26|TSC-1 chemokine (C-C motif) ligand 26 protein-coding 0.014493 0.427885 561_WT_peak_5817 chr5 75698719 75698966 + 135 NA promoter-TSS (NM_006633) promoter-TSS (NM_006633) -238 NM_006633 10788 Hs.291030 NM_006633 HPRD:09253 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding 0.060729 0.608871 67(TCCCGGCCCA,+,0.00) -59(CGGTTTTT,-,0.00) 561_WT_peak_6564 chr7 302865 303216 + 135 NA Intergenic Intergenic -27096 NM_001195127 100288524 Hs.702860 NM_001195127 WI2-2373I1.2 - forkhead box L1-like protein-coding 0.048433 0.690341 113(AAGCGGCT,+,0.00) -90(CAGCCCCAGCGC,+,0.00),-37(CAGCCCCAGCGC,+,0.00),16(CAGCCCCAGCGC,+,0.00),122(CAGCCCCAGCGC,+,0.00) 561_WT_peak_5091 chr3 47204599 47205065 + 135 NA intron (NM_014159, intron 1 of 20) CpG 635 NM_014159 29072 Hs.517941 NM_012271 HPRD:11043 SETD2 HBP231|HIF-1|HIP-1|HYPB|KMT3A|SET2|p231HBP SET domain containing 2 protein-coding 0.098712 0.657388 41(CGGCCCGGGGGC,+,0.00),72(CCTTCCGGTCCG,-,0.00) 98(CGGGGAGGTCGG,-,0.00),267(CCGGGATGGCCG,-,0.00) 169(TCTTGCCG,+,0.00) 79(GTCCGAGG,-,0.00) -118(CAAACCCG,+,0.00),-70(CAAAACCC,+,0.00) -40(GAATCCGGAAGC,+,0.00) 221(GCGGGGCCCGGA,+,0.00) 258(CGCCGAGCCCCG,+,0.00) 93(CGTCGCGG,+,0.00) 218(GCAGCGGGGC,+,0.00) 53(CAGGCAACCCGC,-,0.00) 561_WT_peak_6113 chr6 16481931 16482285 + 135 NA intron (NM_001128164, intron 6 of 7) intron (NM_001128164, intron 6 of 7) 243297 NM_006877 2766 Hs.484741 NM_006877 HPRD:00754 GMPR GMPR1 guanosine monophosphate reductase protein-coding 0.008475 0.388732 -5(CAAAACCA,+,0.00) 561_WT_peak_6670 chr7 50428275 50428615 + 135 NA intron (NM_001291840, intron 2 of 2) intron (NM_001291840, intron 2 of 2) 69801 NM_001291842 10320 Hs.435949 NM_006060 HPRD:04318 IKZF1 Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 (Ikaros) protein-coding 0.032353 0.571848 76(ATGTGGCT,+,0.00),131(AGGTGGCT,+,0.00) 161(CCTCCTGCCCGC,+,0.00) 92(CGCTGCCCCAGC,-,0.00) -8(GCTCCGCAGC,-,0.00) 561_WT_peak_2019 chr13 43566074 43567014 + 135 NA promoter-TSS (NM_033255) promoter-TSS (NM_033255) -137 NM_033255 94240 Hs.546467 NM_033255 HPRD:06309 EPSTI1 BRESI1 epithelial stromal interaction 1 (breast) protein-coding 0.051064 0.520723 -6(GATCCCGGGTCG,-,0.00) 108(ATGCGGCT,+,0.00) 22(GGCGCCGA,-,0.00) 3(TCGGGCGG,-,0.00),253(CCGTCCGA,+,0.00),304(TTGGTCGG,-,0.00) 92(CGTCGCTG,+,0.00) 254(CGTCCGAC,+,0.00),255(GTCCGACC,-,0.00) 163(CGGTTTTA,-,0.00),658(CAAAGCCG,+,0.00) 269(CGGGTTAA,+,0.00) -27(GCCGCCCA,+,0.00) -95(CCGCGAAG,-,0.00) 113(GCTGGGACGC,+,0.00) 561_WT_peak_914 chr10 22725665 22726399 + 135 NA non-coding (NR_036533, exon 1 of 1) non-coding (NR_036533, exon 1 of 1) 826 NR_036533 100499489 Hs.7444 NR_036533 LOC100499489 - uncharacterized LOC100499489 ncRNA 0.114441 0.680272 -89(GCCTCCGGGTCT,-,0.00) 93(AGCCGCAT,-,0.00),332(AGCGGCCT,-,0.00),426(AGCGGCCT,-,0.00) 142(CCGCCTTACCAG,+,0.00) 419(GGCGTGGA,-,0.00) 126(GGGCCGGCGCTA,-,0.00) -151(TCGGTGGG,-,0.00),19(CGGACCGA,+,0.00) -58(CCCGCGGC,-,0.00) 158(CCGTGCCG,+,0.00),395(CGGCGCGA,-,0.00) 164(CGGGAGGAGCTG,+,0.00),217(CTGCTTCCTCCG,-,0.00) 130(CGGCGCTA,+,0.00),437(CGCCGCTA,+,0.00) 358(GCTTCTGGTTTC,-,0.00) 52(GGCGCGGC,-,0.00) 123(GCGGGGCCGGCG,+,0.00) 15(AACGCGGACC,-,0.00),468(CGGCCGCTTT,+,0.00) 292(CCGCCACG,-,0.00) 154(GCCGCCGTGCCG,+,0.00) 515(GCCGCGGAGC,+,0.00) 182(CTGCAAGGCCGC,-,0.00),427(GCGGCCTGCCCG,+,0.00) 561_WT_peak_3955 chr2 9563677 9564065 + 135 NA promoter-TSS (NM_004763) promoter-TSS (NM_004763) 205 NM_016207 51692 Hs.515972 NM_016207 HPRD:05825 CPSF3 CPSF-73|CPSF73 cleavage and polyadenylation specific factor 3, 73kDa protein-coding 0.079897 0.637532 -108(CCGACCGG,+,0.00) -78(GCCGCGGG,+,0.00) -82(TAGTGCCG,+,0.00) 145(GGGCTGTGAGGG,-,0.00) -18(TTTACCGG,-,0.00) -76(CGCGGGCTCCGG,-,0.00) 561_WT_peak_3538 chr18 77720217 77720448 + 135 NA Intergenic LTR5_Hs|LTR|ERVK -4250 NM_001136180 440498 Hs.191582 NM_001136180 ENSG00000226742 HSBP1L1 - heat shock factor binding protein 1-like 1 protein-coding 0.012987 0.504310 561_WT_peak_1686 chr12 49582455 49582957 + 135 NA 5' UTR (NM_001270399, exon 1 of 4) 5' UTR (NM_001270399, exon 1 of 4) 401 NM_001270399 7846 Hs.654422 NM_006009 HPRD:03959 TUBA1A B-ALPHA-1|LIS3|TUBA3 tubulin, alpha 1a protein-coding 0.079681 0.614314 -129(AAGTCTCT,+,0.00),128(AGCCGATT,-,0.00),258(ATGCGGCT,+,0.00) -164(TCGGTCGC,-,0.00) -143(CCCGCGGC,-,0.00) -27(GCGGCGGCGGCG,+,0.00) -21(GCGGCGGGGC,+,0.00) 561_WT_peak_3748 chr19 37861810 37862296 + 135 NA promoter-TSS (NM_032453) promoter-TSS (NM_032453) -6 NM_032453 84503 Hs.590940 NM_032453 ENSG00000189164 ZNF527 - zinc finger protein 527 protein-coding 0.100823 0.677618 114(TCGGTCGC,-,0.00) -80(GCCGCGGG,+,0.00),139(CCCGCGGC,-,0.00) 236(CGGCAGGA,-,0.00) 215(GCCGCGCC,+,0.00) 215(GCCGCGCCAGGG,+,0.00) 141(CGCGGCGCCGGG,+,0.00),141(CGCGGCGCCGGG,-,0.00) 103(CGTCGCGG,+,0.00) 561_WT_peak_374 chr1 111418074 111418303 + 135 NA intron (NM_001040033, intron 2 of 8) intron (NM_001040033, intron 2 of 8) 2466 NM_000560 963 Hs.443057 NM_000560 HPRD:01054 CD53 MOX44|TSPAN25 CD53 molecule protein-coding 0.004367 0.504348 -59(CGTCCCTA,+,0.00) 561_WT_peak_7122 chr8 120844730 120845181 + 135 NA 5' UTR (NM_003184, exon 1 of 26) 5' UTR (NM_003184, exon 1 of 26) 119 NM_003184 6873 Hs.122752 NM_003184 HPRD:07060 TAF2 CIF150|MRT40|TAF2B|TAFII150 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa protein-coding 0.073171 0.599558 -97(AGCGGCAT,-,0.00),43(AGCGACCT,-,0.00) 103(GCCGTCGA,-,0.00) 218(GGCGGGGG,+,0.00) -95(CGGCATGA,-,0.00) 191(CTCCGACG,-,0.00) 228(GAACCAGGAAGT,+,0.00) -68(GCTTCCCGGC,-,0.00) 561_WT_peak_1411 chr11 74109876 74110138 + 135 NA promoter-TSS (NM_173582) promoter-TSS (NM_173582) -505 NM_173582 283209 Hs.26612 NM_173582 HPRD:11427 PGM2L1 BM32A phosphoglucomutase 2-like 1 protein-coding 0.057252 0.501901 -107(CCGCGTTCCCCC,+,0.00) -114(AGCAGCTCCGCG,-,0.00) 561_WT_peak_4278 chr2 120516984 120517380 + 135 NA promoter-TSS (NM_002830) promoter-TSS (NM_002830) -25 NM_002830 5775 Hs.469809 NM_002830 HPRD:01471 PTPN4 MEG|PTPMEG|PTPMEG1 protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte) protein-coding 0.088384 0.667506 41(AGGCCGCT,+,0.00),196(AGCCGCCA,-,0.00) 4(CCGCCTCCCCCC,+,0.00) -14(GGCGGGGG,+,0.00) -31(TCGCGACG,-,0.00),105(TAGCGAGG,-,0.00) 115(GGGTTTTG,-,0.00) 143(GCCTCCTGTTGC,-,0.00) 191(TGCGCAGC,-,0.00) -18(GCGGGGCGGGGG,+,0.00),183(GCGGCGCCTGCG,+,0.00) -25(CGCGGCTGCGGG,-,0.00) -28(CGACGCGG,+,0.00) 197(GCCGCCATGTTC,+,0.00) -21(GCTGCGGGGC,+,0.00) 561_WT_peak_575 chr1 160231977 160232283 + 135 NA non-coding (NR_028104, exon 1 of 13) non-coding (NR_028104, exon 1 of 13) 147 NR_028106 50717 Hs.632447 NM_015726 HPRD:18300 DCAF8 GAN2|H326|WDR42A DDB1 and CUL4 associated factor 8 protein-coding 0.084967 0.684039 -106(GGCGCAGGCCGA,-,0.00) -128(AACCGGCT,+,0.00),26(TAGCGGCT,+,0.00) -92(CGGAACGA,-,0.00) -123(GCTGGGAAGC,+,0.00),-13(GCTCAGCAGC,-,0.00) 561_WT_peak_2427 chr15 38746234 38746713 + 134 NA intron (NM_173611, intron 1 of 7) CpG 145 NM_173611 283742 Hs.6799 NM_173611 FAM98B - family with sequence similarity 98, member B protein-coding 0.075157 0.639583 -113(CGGACCGGAACC,+,0.00) 50(AGACGCCT,-,0.00) 144(CCTCCTTCCCTG,+,0.00) 169(GGCGCCGA,-,0.00) -12(CCAACCGA,+,0.00),173(CCGACGGA,+,0.00) -99(GGCGCGGT,-,0.00),126(TGGGCGGC,-,0.00) 304(CGCGGAGCGGCC,+,0.00) 122(GGCCTGGGCGGC,-,0.00) 82(TTGGCCTGGCTG,+,0.00) 561_WT_peak_3776 chr19 42048449 42048673 + 134 NA Intergenic Intergenic 6701 NR_110724 101927931 Hs.158951 NR_110724 LINC01480 - long intergenic non-protein coding RNA 1480 ncRNA 0.026786 0.426667 -63(TCCACGCC,+,0.00) -39(GTCCGTCG,-,0.00) 561_WT_peak_5056 chr3 33482506 33482962 + 134 NA promoter-TSS (NM_001128161) promoter-TSS (NM_001128161) -837 NM_001128161 7342 Hs.729120 NM_014517 HPRD:10291 UBP1 LBP-1B|LBP-1a|LBP1A|LBP1B upstream binding protein 1 (LBP-1a) protein-coding 0.050439 0.531729 -6(AGCGACCT,-,0.00) -95(GGGCAGGCGGTC,-,0.00) 171(AGGCCCGGGC,-,0.00) 43(TTTACCGG,-,0.00) 58(GAAATAGAAAGC,+,0.00) 561_WT_peak_1405 chr11 72681003 72681353 + 134 NA intron (NM_014824, intron 8 of 19) intron (NM_014824, intron 8 of 19) 155727 NM_033388 89849 Hs.653186 NM_033388 HPRD:10959 ATG16L2 ATG16B|WDR80 autophagy related 16-like 2 (S. cerevisiae) protein-coding 0.000000 0.344729 -31(AAGTGGTT,+,0.00) 175(CAAAACCT,+,0.00) -44(ACTTGCTGTTTC,-,0.00) 561_WT_peak_716 chr1 209925135 209925521 + 134 NA Intergenic Intergenic -4049 NM_025228 80342 Hs.147434 NM_025228 HPRD:16305 TRAF3IP3 T3JAM TRAF3 interacting protein 3 protein-coding 0.007772 0.434109 81(AAGTCTCT,+,0.00) 561_WT_peak_7289 chr9 72374537 72374872 + 134 NA intron (NM_001099666, intron 1 of 7) CpG 172 NM_001099666 375743 Hs.744192 NM_001099666 ENSG00000188647 PTAR1 - protein prenyltransferase alpha subunit repeat containing 1 protein-coding 0.128358 0.705357 -64(TCTGCCTCCTCC,+,0.00) -95(GGCGGCCGAC,+,0.00),45(GGCGGCGGAG,+,0.00),160(GGCGGCCGCG,+,0.00) -78(CCGCCCGA,+,0.00),-14(CCGCCCGA,+,0.00) 17(CCCCCGCC,-,0.00) -106(GCCGGGCCAGCG,+,0.00),12(CCCCGCCCCCGC,-,0.00) 48(GGCGGAGGCGCG,+,0.00) -74(CCGACACG,-,0.00) 561_WT_peak_6204 chr6 27446522 27446822 + 134 NA Intergenic tRNA-Ser-TCY|tRNA|tRNA -5775 NM_007149 7738 Hs.158174 NM_007149 HPRD:03785 ZNF184 - zinc finger protein 184 protein-coding 0.050000 0.471761 -27(TCCTGCCG,+,0.00) -43(CCCGCGCA,+,0.00) 561_WT_peak_4589 chr20 25677248 25677603 + 134 NA 5' UTR (NM_015655, exon 1 of 5) 5' UTR (NM_015655, exon 1 of 5) 115 NM_015655 26152 Hs.61881 NM_015655 HPRD:15779 ZNF337 - zinc finger protein 337 protein-coding 0.126761 0.724719 -11(GGCTGAGGGCGA,-,0.00) -143(GACGCCGGGCCT,-,0.00),146(CGGCCCGGAGGC,+,0.00) -14(GGCGGCTGAG,+,0.00) -83(TCCCGGCCCT,+,0.00) -41(GGGACCCGCAGG,+,0.00) 142(GGCGCGGC,-,0.00) -149(CGCGGAGACGCC,+,0.00) 142(GGCGCGGCCC,-,0.00) 3(CGAGGCGG,+,0.00) 561_WT_peak_3335 chr17 73031087 73031359 + 134 NA intron (NR_110835, intron 2 of 7) tRNA-Arg-CGG|tRNA|tRNA 2561 NR_110835 23510 Hs.514468 NM_015353 HPRD:17176 KCTD2 - potassium channel tetramerization domain containing 2 protein-coding 0.069853 0.571429 -22(AGGCGTCT,+,0.00) -105(CGGCACGC,-,0.00) -19(CGTCTGAC,+,0.00) -132(GCGGCCAGGGTG,+,0.00) 561_WT_peak_3926 chr19 58459024 58459277 + 134 NA promoter-TSS (NM_005773) promoter-TSS (NM_005773) -73 NM_005773 10172 Hs.596242 NM_005773 HPRD:06095 ZNF256 BMZF-3|BMZF3 zinc finger protein 256 protein-coding 0.086957 0.625984 -103(CGCGTGCG,+,0.00),-97(CGCTTACG,+,0.00) 20(CACCTCCTTCCG,-,0.00) 561_WT_peak_2324 chr14 90849655 90850492 + 134 NA Intergenic CpG -13254 NM_006888 801 Hs.282410 NM_006888 HPRD:00241 CALM1 CALML2|CAMI|CPVT4|DD132|PHKD|caM calmodulin 1 (phosphorylase kinase, delta) protein-coding 0.080048 0.621718 -63(AACCGGCT,+,0.00) -133(TCGCGCCG,+,0.00),415(CGGCAGGA,-,0.00) 310(CTGTTTTG,-,0.00) 552(CGGGTAAA,+,0.00) 305(CCTTCCTGTTTT,-,0.00) 503(AGCGCGCA,+,0.00) 21(GCCTCGCCCCGC,-,0.00) 479(AACGCGGCCA,-,0.00) 337(CCGAGAAG,-,0.00) 561_WT_peak_4212 chr2 96812048 96812334 + 134 NA Intergenic Intergenic -1012 NM_004418 1844 Hs.1183 NM_004418 HPRD:04348 DUSP2 PAC-1|PAC1 dual specificity phosphatase 2 protein-coding 0.027972 0.641115 8(CCGCCCTCCCCC,+,0.00) 8(CCGCCCTCCCCC,+,0.00) -115(AGGGAGAAGCAG,+,0.00) 561_WT_peak_2539 chr15 70391609 70391900 + 134 NA Intergenic CpG-8039 -1498 NM_001105192 7090 Hs.287362 NM_005078 HPRD:02558 TLE3 ESG|ESG3|GRG3|HsT18976 transducin-like enhancer of split 3 protein-coding 0.099656 0.592466 -42(GGCCGCCAGCCC,+,0.00) 62(CGGCTCGA,-,0.00) -153(CGCTTTTG,-,0.00) 561_WT_peak_2725 chr16 21552000 21552398 + 134 NA Intergenic L1MB7|LINE|L1 -20434 NR_002594 387254 Hs.448808 NR_002594 SLC7A5P2 IMAA|MMAA solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2 pseudo 0.020101 0.496241 -72(CCCCCGCC,-,0.00) 139(GGGCTGTGAAGG,-,0.00) 561_WT_peak_7365 chr9 99180387 99180682 + 134 NA 5' UTR (NM_153695, exon 1 of 5) 5' UTR (NM_153695, exon 1 of 5) 135 NM_153695 195828 Hs.494557 NM_153695 HPRD:18330 ZNF367 AFF29|CDC14B|ZFF29 zinc finger protein 367 protein-coding 0.094915 0.672297 -96(AGCCACCT,-,0.00) 27(GCCCGGCCCT,+,0.00) -143(TCCTGCCG,+,0.00) 12(GGGAAGCAGCGG,+,0.00) 114(TTTTCCCG,-,0.00) -104(TGCGCAGC,-,0.00) -160(CCGAGTCG,-,0.00) 24(GCGGCCCGGCCC,+,0.00) 561_WT_peak_1629 chr12 25538638 25539816 + 134 NA Intergenic CpG -135362 NM_033360 3845 Hs.505033 NM_004985 HPRD:01817 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|KI-RAS|KRAS1|KRAS2|NS|NS3|RASK2 Kirsten rat sarcoma viral oncogene homolog protein-coding 0.077250 0.576760 966(AGCGACAT,-,0.00) 512(GCGGGCACGCGG,-,0.00) 312(TCGCCGCC,+,0.00),466(GGCGGCGA,-,0.00),556(GGCGTCCA,-,0.00) 252(CGGCTGCCGCCC,-,0.00) 389(CGCGTGCG,+,0.00) 168(CCGAGCGA,+,0.00) 238(AGGGCCGGGA,-,0.00) 525(GCCGCGGG,+,0.00) 395(CGTCACGA,-,0.00),488(TCGTGCCA,+,0.00) 458(CACAACCG,+,0.00),643(CAGTTTTG,-,0.00) 71(CCTTCTGCCCCC,-,0.00),405(CATCCGGCTCCC,-,0.00) 875(GAAACAGGGAGG,+,0.00) 248(TGCGCGGC,-,0.00),420(TGGGCGGC,-,0.00) 307(CGCCGTCGCCGC,-,0.00),520(GCGGGGCCGCGG,+,0.00) 519(CGCGGGGCCGCG,+,0.00),519(CGCGGGGCCGCG,-,0.00) -77(AGCCCCGCCC,-,0.00) 317(GCCGCCCTGCCG,+,0.00),984(CCCCATTGCGGC,-,0.00) 294(GCTCCGCAGC,-,0.00) -16(CAGGAAGGCCGC,-,0.00) 561_WT_peak_4707 chr20 57606931 57607282 + 134 NA intron (NR_037929, intron 6 of 7) CpG 316 NM_006886 514 Hs.177530 NM_006886 ATP5E ATPE|MC5DN3 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit protein-coding 0.088319 0.664773 -1(TCGAGGCC,+,0.00),33(GCGACGCC,+,0.00),46(GGCGGCGA,-,0.00),50(GCGACGCC,+,0.00) 31(CAGCGACG,-,0.00) 4(GCCGCGCC,+,0.00) 43(CTTGGCGG,+,0.00) 47(GCGGCGACGC,+,0.00) 135(GCGGGCCGGCTC,+,0.00) 561_WT_peak_5203 chr3 111386737 111386986 + 134 NA Intergenic Intergenic -6662 NM_001185106 257068 Hs.477114 NM_153268 HPRD:07114 PLCXD2 - phosphatidylinositol-specific phospholipase C, X domain containing 2 protein-coding 0.004016 0.408000 -64(GAAACAGAAAGA,+,0.00),-7(GGAAGAGGAAGC,+,0.00) 561_WT_peak_3572 chr19 2552959 2553339 + 133 NA intron (NM_052847, intron 3 of 4) L1M4|LINE|L1 77026 NM_015675 4616 Hs.110571 NM_015675 HPRD:05382 GADD45B GADD45BETA|MYD118 growth arrest and DNA-damage-inducible, beta protein-coding 0.034211 0.412073 -6(CAAAACCA,+,0.00) 561_WT_peak_6304 chr6 35436075 35436569 + 133 NA intron (NM_007104, intron 1 of 5) CpG 144 NM_007104 4736 Hs.148340 NM_007104 HPRD:10199 RPL10A CSA19|Csa-19|L10A|NEDD6 ribosomal protein L10a protein-coding 0.101215 0.656566 252(TCGAAGCC,+,0.00) 82(GCCGCGGG,+,0.00) 192(CGTCGCTC,+,0.00) 227(GTCCGCCG,-,0.00) 53(GCCGCGCC,+,0.00) -164(CTTCTCGG,+,0.00) 82(GCCGCGGGGC,+,0.00) 561_WT_peak_198 chr1 40974207 40974615 + 133 NA promoter-TSS (NM_022774) promoter-TSS (NM_022774) -22 NM_022774 64789 Hs.59584 NM_022774 HPRD:07955 EXO5 C1orf176|DEM1|Exo V|hExo5 exonuclease 5 protein-coding 0.095588 0.667482 -71(ACACCCTCCTCC,+,0.00) 5(CTGGGAAGGCGG,-,0.00) 27(GCCGCGGG,+,0.00) 231(GGGCTGGGAGGC,-,0.00) 184(GTCCGAGG,-,0.00) -93(CAAAACCT,+,0.00) 54(TGGGCGGC,-,0.00) -14(GGCGGCGCCGCG,+,0.00),-14(GGCGGCGCCGCG,-,0.00) 55(GGGCGGCTTT,+,0.00) -8(GCCGCGAGGGCC,+,0.00) 27(GCCGCGGGGC,+,0.00),233(GCTGGGAGGC,+,0.00) 561_WT_peak_328 chr1 94158860 94159120 + 133 NA intron (NM_001261408, intron 3 of 13) intron (NM_001261408, intron 3 of 13) -11596 NM_003567 8412 Hs.36958 NM_003567 HPRD:05268 BCAR3 NSP2|SH2D3B breast cancer anti-estrogen resistance 3 protein-coding 0.011538 0.459770 -161(CAAAACCT,+,0.00) 561_WT_peak_693 chr1 204535074 204535304 + 133 NA Intergenic Intergenic 49682 NM_001278517 4194 Hs.497492 NM_002393 HPRD:04082 MDM4 HDMX|MDMX|MRP1 MDM4, p53 regulator protein-coding 0.026087 0.432900 -71(GGGCGGGCGGTC,-,0.00) 561_WT_peak_5643 chr4 184365125 184366336 + 133 NA promoter-TSS (NM_017632) promoter-TSS (NM_017632) -59 NM_017632 55602 Hs.644077 NM_017632 HPRD:16683 CDKN2AIP CARF CDKN2A interacting protein protein-coding 0.116433 0.706271 205(GGAGGAGGACGG,-,0.00) 858(GGACCCGAAACC,+,0.00) 44(AGGCGTCT,+,0.00),407(AAGCGTCT,+,0.00) 201(CGGGGGAGGAGG,-,0.00) 327(CCGACGCC,+,0.00),458(GGCGGCGA,-,0.00),843(CCGACGCC,+,0.00) 418(GAGCGCCGGCTC,+,0.00) -48(TCGCTCGG,-,0.00),272(TCGGTCGT,-,0.00) 71(CCCGCGGC,-,0.00),132(CGCCCGGC,-,0.00),199(GGCGGGGG,+,0.00),570(GCCGCGGG,+,0.00) 214(CGGCAGGA,-,0.00),428(TCGCGCCG,+,0.00) 476(GGGAAGAAGCCG,+,0.00),831(CGGATGAAGCTG,+,0.00) 947(CGTCCCTA,+,0.00) 325(GCCCGACG,-,0.00) 863(CGAAACCG,+,0.00) 864(GAAACCGGCAGC,+,0.00) 128(GCCGCGCC,+,0.00),502(TGGGCGGT,-,0.00) 64(CACAGGCCCCGC,-,0.00),390(GCGGCCCCGGCG,+,0.00),394(CCCCGGCGCCGC,-,0.00),453(GCGGCGGCGGCG,+,0.00),599(CGCTCGCCCCGC,-,0.00),805(CGCTGGCGGCGC,-,0.00),814(CGCTGCCTCCGC,-,0.00) 73(CGCGGCTGCGGG,-,0.00) 69(GCCCCGCGGC,-,0.00),183(GCGCCGCAGC,-,0.00),382(GCGTCGCAGC,-,0.00),729(GCTGCGACGG,+,0.00),778(GCTTCGCAAC,-,0.00) 707(GCAGCCTGGGTG,+,0.00) 561_WT_peak_3642 chr19 13056526 13056886 + 133 NA promoter-TSS (NM_001270363) promoter-TSS (NM_001270363) 78 NM_001270363 5886 Hs.643267 NM_005053 HPRD:07191 RAD23A HHR23A|HR23A RAD23 homolog A (S. cerevisiae) protein-coding 0.144444 0.717452 153(CGGGCCGGAGCC,+,0.00) 57(TCGCTCGG,-,0.00) 148(CGGGCCGGGC,-,0.00) 55(CGTCGCTC,+,0.00),174(GAGCGACG,-,0.00) -17(GGCGCGGC,-,0.00) 43(CCGGGGCCGCCG,+,0.00),60(CTCGGGCCCCGC,-,0.00),151(GCCGGGCCGGAG,+,0.00) -20(CGCGGCGCGGCG,+,0.00),-20(CGCGGCGCGGCG,-,0.00) 52(CCGCGTCG,-,0.00) 67(CCCGCCATGGCC,+,0.00),69(CGCCATGGCCGT,-,0.00) 561_WT_peak_4460 chr2 208890207 208890723 + 133 NA promoter-TSS (NM_001080475) promoter-TSS (NM_001080475) -181 NM_001080475 389072 Hs.159188 NM_001080475 ENSG00000178385 PLEKHM3 DAPR|PLEKHM1L pleckstrin homology domain containing, family M, member 3 protein-coding 0.054264 0.541586 -11(GGACCCGGCAGC,+,0.00) -119(AAGCGGCT,+,0.00),-118(AGCGGCTT,-,0.00) -162(CAGCCCGCCCGG,+,0.00) -140(TCCCGGCCCG,+,0.00) 274(CGGTTTTG,-,0.00),337(TGGTTTTG,-,0.00) -138(CCGGCCCGGCTC,+,0.00),21(CCGCCAGGCCTC,-,0.00) 561_WT_peak_7755 chrY 59363138 59363465 + 133 NA Intergenic (TTAGGG)n|Simple_repeat|Simple_repeat -2447 NR_110561 727856 Hs.740212 NR_110561 DDX11L16 - DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 like 16 pseudo 0.000000 0.515244 561_WT_peak_868 chr10 6317225 6317578 + 132 NA Intergenic Intergenic -51106 NR_040079 399715 NR_040079 ENSG00000215244 LOC399715 - uncharacterized LOC399715 ncRNA 0.039660 0.573446 46(AGGCCTCT,+,0.00) 12(CCGGGAACGCTG,-,0.00) -58(TCGGGGCCTGCG,+,0.00) 561_WT_peak_4649 chr20 44600395 44600985 + 132 NA intron (NM_022095, intron 1 of 27) CpG-16708 143 NM_022095 63925 Hs.174193 NM_022095 HPRD:11709 ZNF335 MCPH10|NIF-1|NIF1|NIF2 zinc finger protein 335 protein-coding 0.091525 0.666667 124(GCCTCCGGGTAT,-,0.00) -58(AGGCGGCT,+,0.00),62(AGCGACTA,-,0.00),354(AGGTCGCT,+,0.00) -81(GCTCCCCCCCGG,+,0.00) 13(CCGACGCC,+,0.00),237(GGCATCGA,-,0.00) -48(CAGCGACG,-,0.00),214(TAGCCACG,-,0.00) 11(GCCCGACG,-,0.00) 371(CAAAACCA,+,0.00) 186(TCTACCCG,-,0.00) -153(CCTTCGGCCCCC,-,0.00) -18(GGCTGTCCCCGG,-,0.00),316(CGCTGGCCCCGG,-,0.00) 269(GCTGCGGAGG,+,0.00) 561_WT_peak_3588 chr19 5622586 5622919 + 132 NA promoter-TSS (NM_001201340) promoter-TSS (NM_001201340) 186 NM_014649 9667 Hs.655392 NM_014649 HPRD:06424 SAFB2 - scaffold attachment factor B2 protein-coding 0.141141 0.682635 -112(AGCCGCCT,-,0.00),28(TAGCGGCT,+,0.00) 101(CGCGCACG,+,0.00),103(CGCACGCG,-,0.00),107(CGCGCACG,+,0.00),109(CGCACGCG,-,0.00) -158(CCGCTTCTTCAG,-,0.00) 99(GCCGCGCA,+,0.00) 81(CTCCCGCCCCGC,-,0.00) -117(CGCTGAGCCGCC,+,0.00) -148(AGCTCCGCCC,-,0.00) -110(CCGCCTCG,-,0.00),-57(CCGAGTCG,-,0.00) 141(CAGCAAGGACGC,-,0.00) 561_WT_peak_1163 chr10 125919450 125919758 + 132 NA Intergenic Intergenic -66481 NM_001270765 51363 Hs.287537 NM_014863 HPRD:12203 CHST15 BRAG|GALNAC4S-6ST carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 protein-coding 0.031579 0.412587 79(TTTACACG,-,0.00) 561_WT_peak_3306 chr17 62971882 62972172 + 132 NA promoter-TSS (NR_026903) promoter-TSS (NR_026903) -324 NR_026903 201283 Hs.396447 NM_153032 HPRD:08720 AMZ2P1 - archaelysin family metallopeptidase 2 pseudogene 1 pseudo 0.113793 0.683849 -145(AAGCCCCAGCCG,+,0.00) -14(GCCGCGGG,+,0.00) -10(CGGGTTTG,-,0.00) -95(CGGGGCTCCGCG,-,0.00) -91(GCTCCGCGGC,-,0.00) -86(GCGGCCTGGTTC,+,0.00) 561_WT_peak_3032 chr17 8042433 8042906 + 132 NA Intergenic Intergenic 5720 NR_106943 102465532 NR_106943 MIR6883 hsa-mir-6883 microRNA 6883 ncRNA 0.031712 0.483122 -119(TCCCTCTCCTCC,+,0.00) -139(GAGCGGCAGCCT,+,0.00) -118(CCCTCTCCTCCC,+,0.00) -89(CAAAACGG,+,0.00),-78(CAAATCCG,+,0.00) 235(AGCCACGGCGCC,-,0.00) 561_WT_peak_3343 chr17 73663417 73663712 + 132 NA promoter-TSS (NM_004259) promoter-TSS (NM_004259) 165 NM_013260 29115 Hs.655088 NM_013260 HPRD:17094 SAP30BP HCNGP|HTRG|HTRP SAP30 binding protein protein-coding 0.071186 0.601351 18(CTGCCCGGAATG,+,0.00) -91(TTTACGCG,-,0.00) -45(CGAGGCGG,+,0.00) 561_WT_peak_3311 chr17 63177385 63177762 + 132 NA intron (NM_003835, intron 9 of 18) intron (NM_003835, intron 9 of 18) 44117 NM_001081955 8787 Hs.664380 NM_003835 HPRD:04962 RGS9 PERRS|RGS9L regulator of G-protein signaling 9 protein-coding 0.015915 0.494709 40(AGGTGTCT,+,0.00) 103(GGGGCCGGGA,-,0.00) -71(TGGTTTTG,-,0.00) -157(GCTTCCCTTTTC,-,0.00) 561_WT_peak_6252 chr6 29895064 29895246 + 132 NA promoter-TSS (NR_001317).7 promoter-TSS (NR_001317).7 -163 NR_001317 80868 Hs.661198 NR_001317 HCG4B HCG4P6|HCGIV-06|HCGIV-6|HCGIV.5|bCX67J3.3|bPG309N1.1|bQB90C11.3 HLA complex group 4B (non-protein coding) ncRNA 0.065934 0.628415 -132(TGGCGGCT,+,0.00),-38(AGACACCT,-,0.00) -141(CGGCGGAC,+,0.00) -137(GGACATGGCGGC,-,0.00) 561_WT_peak_7447 chr9 131873746 131873997 + 132 NA promoter-TSS (NM_001257363) promoter-TSS (NM_001257363) -96 NM_001193397 5524 Hs.400740 NM_021131 HPRD:02858 PPP2R4 PP2A|PR53|PTPA protein phosphatase 2A activator, regulatory subunit 4 protein-coding 0.079681 0.698413 -28(GGCTGAGGGCGA,-,0.00) -60(GCATCCGGGTCG,-,0.00) -158(CGGCCGGCGCTC,-,0.00),-18(GAGCGGCAGCCG,+,0.00) -108(GGGAGAGGAAGG,+,0.00) 10(GCGGGGCCAGGC,+,0.00),20(GCCGGGCCGGGG,+,0.00) 12(GGGGCCAGGCCG,+,0.00),13(GGGCCAGGCCGG,-,0.00) 561_WT_peak_2729 chr16 21964440 21964968 + 132 NA promoter-TSS (NM_003366) promoter-TSS (NM_003366) 95 NM_003366 7385 Hs.528803 NM_003366 HPRD:01876 UQCRC2 MC3DN5|QCR2|UQCR2 ubiquinol-cytochrome c reductase core protein II protein-coding 0.041667 0.534972 73(CCGGCCTCCGCC,+,0.00) 241(AGGTGTCT,+,0.00) 53(CGGGGAACGCTG,-,0.00) 273(TCGGTCTG,-,0.00) 188(CGGGTTTG,-,0.00) 136(GAATCATGAAGC,+,0.00) 233(CGAGGCGG,+,0.00) 203(GCTGGGGAGC,+,0.00) 561_WT_peak_441 chr1 145396749 145397293 + 132 NA intron (NM_001039703, intron 68 of 85) intron (NM_001039703, intron 68 of 85) -16170 NM_213653 148738 Hs.632436 NM_145277 HPRD:10521 HFE2 HFE2A|HJV|JH|RGMC hemochromatosis type 2 (juvenile) protein-coding 0.060662 0.524771 -27(TGACTCGGATTC,+,0.00) 41(AGCCACTA,-,0.00) 219(TCGATGCC,+,0.00) -64(AAAAACCG,+,0.00) 250(TGGGCGGC,-,0.00) 561_WT_peak_7539 chrX 48541980 48542207 + 132 NA promoter-TSS (NM_000377) promoter-TSS (NM_000377) -93 NM_000377 7454 Hs.2157 NM_000377 HPRD:02314 WAS IMD2|SCNX|THC|THC1|WASP Wiskott-Aldrich syndrome protein-coding 0.013216 0.561404 561_WT_peak_6666 chr7 45025937 45026247 + 132 NA promoter-TSS (NR_002952) promoter-TSS (NR_002952) 167 NR_003697 285958 Hs.25892 NR_003697 ENSG00000232956 SNHG15 C7orf40|Linc-Myo1g|MYO1GUT small nucleolar RNA host gene 15 (non-protein coding) ncRNA 0.067742 0.604502 -117(CGAACGCG,-,0.00) -131(CGGGTAAA,+,0.00) 90(ACCGCGCC,+,0.00) 561_WT_peak_1180 chr11 506207 506805 + 132 NA intron (NM_203387, intron 1 of 10) CpG 315 NM_203383 6050 Hs.530687 NM_002939 HPRD:01412 RNH1 RAI|RNH ribonuclease/angiogenin inhibitor 1 protein-coding 0.075251 0.626043 71(GACACCGGCCCC,-,0.00),139(CGGCCCGGCGTC,+,0.00) 303(AGGCCGCT,+,0.00) 201(CCTCCCTCCCCG,+,0.00),290(GCTCCTTCCCGG,+,0.00),297(CCCGGGAGGCCG,-,0.00),298(CCGGGAGGCCGC,-,0.00) 249(CGCCCGGC,-,0.00) 225(CAAGACCG,+,0.00) 229(ACCGCCCA,+,0.00) 137(CGCGGCCCGGCG,-,0.00) 134(CTTCGCGG,+,0.00) 279(TCCGCCAGGGCG,+,0.00) 133(GCTTCGCGGC,-,0.00) -104(GGGGCCTGCCTG,+,0.00),138(GCGGCCCGGCGT,+,0.00),280(CCGCCAGGGCGC,-,0.00) 561_WT_peak_2935 chr16 87417489 87417762 + 132 NA promoter-TSS (NM_024735) promoter-TSS (NM_024735) -226 NM_024735 79791 Hs.567582 NM_024735 FBXO31 FBX14|FBXO14|Fbx31|pp2386 F-box protein 31 protein-coding 0.117216 0.675182 -149(CCCCCTCCCCGC,+,0.00) -135(GGCGGCGA,-,0.00) -157(CCGCGCCACCCC,+,0.00) 63(TCGCGCCG,+,0.00) -158(GCCGCGCC,+,0.00) -163(CCCCGGCCGCGC,-,0.00) -140(CGCGGGGCGGCG,+,0.00) -86(GGCGCCGCCC,-,0.00) 561_WT_peak_724 chr1 212740265 212740586 + 132 NA intron (NM_001030287, intron 1 of 3) intron (NM_001030287, intron 1 of 3) 1749 NM_001030287 467 Hs.460 NM_001674 HPRD:04395 ATF3 - activating transcription factor 3 protein-coding 0.021807 0.437888 561_WT_peak_6041 chr5 178977306 178977720 + 132 NA promoter-TSS (NM_025158) promoter-TSS (NM_025158) -49 NM_025158 80230 Hs.306769 NM_025158 HPRD:15282 RUFY1 RABIP4|ZFYVE12 RUN and FYVE domain containing 1 protein-coding 0.094203 0.667470 -78(GGCGGCCGGG,+,0.00) 115(AGGCGGCT,+,0.00) 67(CCGCCCGCCCGC,+,0.00),109(CCGGGAAGGCGG,-,0.00) 61(CCGCGCCCGCCC,+,0.00),167(GGGCCGGGGCCC,-,0.00) 105(CCGACCGG,+,0.00) 132(GGCGGGGG,+,0.00) -85(TCCTGCCG,+,0.00) 164(CCGGGGCCGGGG,+,0.00),170(CCGGGGCCCGGG,+,0.00) -6(CGAGGCGG,+,0.00) 561_WT_peak_1071 chr10 81076421 81076705 + 132 NA TTS (NM_020338) TTS (NM_020338) -30657 NM_005729 10105 Hs.381072 NM_005729 HPRD:06839 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding 0.003521 0.568421 -71(AGGTGGCT,+,0.00) 28(GTAGCAGGAAGC,+,0.00) 561_WT_peak_2847 chr16 53737830 53738328 + 132 NA promoter-TSS (NM_001127897) promoter-TSS (NM_001127897) 204 NM_001080432 79068 Hs.528833 NM_001080432 FTO ALKBH9 fat mass and obesity associated protein-coding 0.072289 0.589178 202(GGAACCGGAAGG,+,0.00) 84(AGGCGGCT,+,0.00) 254(GGGATGACAGGG,-,0.00) -104(TGTCGGAC,+,0.00) 236(TGCGCGGT,-,0.00) 79(GGCGAAGGCGGC,-,0.00) 561_WT_peak_7493 chrX 1581838 1582165 + 132 NA 3' UTR (NM_178129, exon 2 of 2) 3' UTR (NM_178129, exon 2 of 2) -9346 NM_001173473 8623 Hs.533514 NM_004192 HPRD:02156 ASMTL ASMTLX|ASMTLY|ASTML acetylserotonin O-methyltransferase-like protein-coding 0.039755 0.478659 -159(AAGTGGCT,+,0.00) -119(TCGACGCA,+,0.00) 561_WT_peak_3720 chr19 34663432 34663912 + 132 NA intron (NM_015578, intron 1 of 9) CpG 320 NM_001114093 26065 Hs.744009 NM_015578 HPRD:12697 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A, SCD6 homolog A (S. cerevisiae) protein-coding 0.127083 0.729730 97(GGGGGCCGAG,+,0.00) -154(AAGCGGCT,+,0.00),185(AGGCCTCT,+,0.00) 233(CGGCCTCCCCGC,+,0.00) -140(GGCGCCGA,-,0.00),37(TCGACACC,+,0.00),214(GGCGTCGC,-,0.00) 72(GGTACGCG,-,0.00) -136(CCGACGGA,+,0.00) 156(TCCCTCCCCT,+,0.00) 106(GCCGGGCG,+,0.00),140(CCCGCGGC,-,0.00),240(CCCGCGGC,-,0.00) 161(CCCCTCCCTCCG,-,0.00) 240(CCCGCGGCTCCC,-,0.00) 308(TGCGCGGC,-,0.00) -116(GCGGAGCGGGCG,+,0.00),-65(GCGGCGGCGGCG,+,0.00),-62(GCGGCGGCGGCG,+,0.00) 242(CGCGGCTCCCTG,-,0.00) 99(GGGCCGAGCC,+,0.00) 216(CGTCGCGG,+,0.00) -54(GGCGCCATGAGC,+,0.00) -59(GCGGCGGCGC,+,0.00) 561_WT_peak_7626 chrX 153438112 153438814 + 132 NA Intergenic AluJb|SINE|Alu -9622 NM_000513 2652 Hs.247787 NM_000513 OPN1MW CBBM|CBD|COD5|GCP|GOP|OPN1MW1 opsin 1 (cone pigments), medium-wave-sensitive protein-coding 0.029915 0.529161 36(AGCCCCGGAAGC,+,0.00),377(GATACCGGGTCT,-,0.00) 49(TCCCCGCCCT,+,0.00) 302(CCCGCTCAGCCT,+,0.00) -136(CAAAACCC,+,0.00) 46(GCTTCCCCGC,-,0.00) 561_WT_peak_5400 chr4 3956923 3957193 + 132 NA promoter-TSS (NR_024253) promoter-TSS (NR_024253) 90 NR_024253 348926 Hs.591720 NR_024253 FAM86EP - family with sequence similarity 86, member A pseudogene pseudo 0.125926 0.745387 -123(GCCGGGGG,+,0.00) -45(GCCGCCCA,+,0.00) -76(CGCGAGCCCCGC,-,0.00),-55(CGCTCGCCCCGC,-,0.00) -135(CGTGGCGG,+,0.00) 52(GGCGCCATGGCG,+,0.00),54(CGCCATGGCGTG,-,0.00) -50(GCCCCGCCGC,-,0.00) 561_WT_peak_2939 chr16 87812827 87813047 + 132 NA promoter-TSS (NR_120309) promoter-TSS (NR_120309) -183 NR_120309 102724467 Hs.587857 NR_120309 LOC102724467 - uncharacterized LOC102724467 ncRNA 0.086364 0.647059 -145(GTCGGCCGCC,-,0.00) 43(CGCGGACG,+,0.00) -146(CGTCGGCC,+,0.00) -122(CCCGCGCA,+,0.00) -141(GCCGCCAGGGGT,+,0.00) 561_WT_peak_5637 chr4 169930781 169931176 + 132 NA intron (NM_032783, intron 1 of 4) CpG 490 NM_032783 84869 Hs.659311 NM_032783 HPRD:07859 CBR4 SDR45C1 carbonyl reductase 4 protein-coding 0.081013 0.601010 220(CTTTCCGGGCCA,-,0.00) -4(AGACGCAT,-,0.00) 22(GAGCGCCTGCAC,+,0.00) -11(CTGCACGA,-,0.00) 172(CGGCTTTG,-,0.00) -163(GCTCCTCAGC,-,0.00),-56(GCTGCGTGGC,+,0.00) 561_WT_peak_123 chr1 26947169 26947686 + 132 NA Intergenic CpG 66394 NR_031740 100302190 NR_031740 MIR1976 hsa-mir-1976 microRNA 1976 ncRNA 0.100580 0.650579 -124(AGCGACCT,-,0.00) 343(TCGACGCT,+,0.00) 232(CCGGCCGA,+,0.00) 26(CGGAACGA,-,0.00) 110(CGGGAAAA,+,0.00) 135(CCGACACG,-,0.00) 561_WT_peak_4422 chr2 198318240 198318723 + 131 NA intron (NM_025147, intron 1 of 4) CpG 250 NM_025147 80219 Hs.606592 NM_025147 HPRD:08582 COQ10B - coenzyme Q10 homolog B (S. cerevisiae) protein-coding 0.078675 0.588843 44(GGGACCGGAAGG,+,0.00),71(AGAGCCGGACTC,+,0.00) 30(GGCTGCCGAG,+,0.00) 223(AAGCGACT,+,0.00),224(AGCGACTT,-,0.00) -69(CCGTCCGA,+,0.00) -67(GTCCGAAG,-,0.00) 23(CGATTTTG,-,0.00) 44(GGGACCGGAAGG,+,0.00) 561_WT_peak_4391 chr2 190305860 190306414 + 131 NA promoter-TSS (NM_032168) promoter-TSS (NM_032168) -22 NM_032168 84128 Hs.399984 NM_032168 HPRD:07775 WDR75 NET16|UTP17 WD repeat domain 75 protein-coding 0.057762 0.526126 369(CTCGCCCGCC,-,0.00) 10(AAGTGTCT,+,0.00) 359(CGCGTTCG,+,0.00) -15(CTGTTTTG,-,0.00) 128(ATTACCCG,-,0.00) 184(ACTGCGCA,+,0.00) 157(GCGGGACCAGAG,+,0.00),314(GCGGGGCGTGAG,+,0.00) 561_WT_peak_1592 chr12 10573098 10573245 + 131 NA promoter-TSS (NM_007333) promoter-TSS (NM_007333) 23 NM_007333 3823 Hs.654362 NM_002261 HPRD:04203 KLRC3 NKG2-E|NKG2E killer cell lectin-like receptor subfamily C, member 3 protein-coding 0.000000 0.452703 561_WT_peak_4122 chr2 69664242 69664694 + 131 NA 5' UTR (NM_015700, exon 1 of 8) 5' UTR (NM_015700, exon 1 of 8) 292 NM_001002756 27247 Hs.430439 NM_015700 HPRD:12163 NFU1 HIRIP|HIRIP5|MMDS1|NIFUC|Nfu|NifU NFU1 iron-sulfur cluster scaffold protein-coding 0.086283 0.677704 20(GGCGGCGA,-,0.00),139(TCGCCGCC,+,0.00) 91(TGCGCAGC,-,0.00),197(TGCGCAGC,-,0.00) -3(CCGCCTCG,-,0.00) 117(GCTCCCCAGC,-,0.00) 95(CAGCCCGGCGGC,-,0.00) 561_WT_peak_187 chr1 38455624 38455872 + 131 NA promoter-TSS (NM_006802) promoter-TSS (NM_006802) 13 NM_006802 10946 Hs.77897 NM_006802 HPRD:10411 SF3A3 PRP9|PRPF9|SAP61|SF3a60 splicing factor 3a, subunit 3, 60kDa protein-coding 0.060484 0.594378 -97(TCCTGCCG,+,0.00) -93(GCCGCCCA,+,0.00) 561_WT_peak_1576 chr12 9102613 9102836 + 131 NA promoter-TSS (NM_002355) promoter-TSS (NM_002355) -367 NM_002355 4074 Hs.134084 NM_002355 HPRD:01106 M6PR CD-MPR|MPR 46|MPR-46|MPR46|SMPR mannose-6-phosphate receptor (cation dependent) protein-coding 0.098655 0.611607 -95(TCGCCGCC,+,0.00),-48(TCGACTCC,+,0.00) -13(CAGCGACG,-,0.00) -91(CGCCTGAGAGGG,-,0.00) -158(CTCGGGCTCCGC,-,0.00) 7(GCGTCCTGGCTT,+,0.00) 561_WT_peak_851 chr10 3852553 3852938 + 131 NA Intergenic Intergenic -25272 NM_001160124 1316 Hs.4055 NM_001300 HPRD:03632 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel-like factor 6 protein-coding 0.007792 0.367876 -74(ATGTGGCT,+,0.00) -54(GGGCAGCTTT,+,0.00) 561_WT_peak_3263 chr17 56407434 56407896 + 131 NA TTS (NR_029683) TTS (NR_029683) 699 NR_038413 100506779 Hs.718477 NR_038410 ENSG00000265148 BZRAP1-AS1 - BZRAP1 antisense RNA 1 ncRNA 0.006494 0.384449 561_WT_peak_4993 chr3 5020553 5020947 + 131 NA promoter-TSS (NM_003670) promoter-TSS (NM_003670) -347 NM_003670 8553 Hs.744856 NM_003670 HPRD:16050 BHLHE40 BHLHB2|DEC1|HLHB2|SHARP-2|STRA13|Stra14 basic helix-loop-helix family, member e40 protein-coding 0.065990 0.686076 -13(TCCCCCTCCCCC,+,0.00),185(GGGGGAGGGCGG,-,0.00) 98(AGACACCT,-,0.00),199(AGGTCGCT,+,0.00) 185(GGGGGAGGGCGG,-,0.00) -149(GGGCTGGAGCTA,-,0.00),108(GGGCCGGGGCTG,-,0.00),114(GGGCTGGGGGTG,-,0.00) -155(AGGGCTGGGC,-,0.00) 182(GCCGGGGG,+,0.00) 55(TCGTGCTG,+,0.00) -109(GTCAGACG,-,0.00) 75(CGGGGAAA,+,0.00) -100(GGGCGGATCC,+,0.00) 561_WT_peak_844 chr10 3214524 3215014 + 130 NA intron (NM_014889, intron 1 of 26) CpG 264 NM_014889 10531 Hs.528300 NM_014889 HPRD:07142 PITRM1 MP1|PreP pitrilysin metallopeptidase 1 protein-coding 0.100000 0.706721 -140(CTCGGCCTCC,-,0.00),227(CTCAGCCGCC,-,0.00) 230(AGCCGCCT,-,0.00) -33(CCGGGAGCGCCG,-,0.00) -25(GCCGCGGG,+,0.00) 310(CCCTCTTAACCC,+,0.00) 315(TTAACCCG,-,0.00) 48(CTCGGAGCCTCG,+,0.00) 204(CCGTCGCAGC,-,0.00) 561_WT_peak_5677 chr5 32174064 32174707 + 130 NA promoter-TSS (NM_022130) promoter-TSS (NM_022130) 40 NM_022130 64083 Hs.408909 NM_022130 HPRD:11007 GOLPH3 GOPP1|GPP34|MIDAS golgi phosphoprotein 3 (coat-protein) protein-coding 0.116641 0.722050 -35(TCGCCCTCCTCC,+,0.00),-32(CCCTCCTCCTCC,+,0.00) 18(GACGCCGGGGCG,-,0.00),261(GGCGCCGGAAGC,+,0.00) 273(GGCGGCCGGG,+,0.00) -28(CCTCCTCCCCGC,+,0.00),305(CACCCTTCCCGG,+,0.00) -75(GGCGCCGA,-,0.00),96(GGCGTCGG,-,0.00) -44(CCGACCGG,+,0.00),33(TCCGTCGG,-,0.00) 45(AGGGCCGGGG,-,0.00),251(TGGGCCGGGA,-,0.00),311(TCCCGGCCCT,+,0.00) 48(GCCGGGGG,+,0.00),92(GCCGGGCG,+,0.00) 266(CGGAAGCGGCGG,+,0.00) -64(GGGCCGAGAGGG,-,0.00) 32(GTCCGTCG,-,0.00) 401(CCTTCCGTTCCC,-,0.00) -106(GCTGGGTCAGCG,+,0.00),43(GCAGGGCCGGGG,+,0.00),174(GCGGCGGCGGCG,+,0.00) -73(CGCCGAGCCGGG,+,0.00) -162(CTTGTCGG,+,0.00) 177(GCGGCGGCGC,+,0.00) 84(GCGGGCTGGCCG,+,0.00) 561_WT_peak_2160 chr14 31596958 31597236 + 130 NA exon (NM_015382, exon 26 of 43) exon (NM_015382, exon 26 of 43) 79632 NM_015382 25831 Hs.708017 NM_015382 HPRD:17098 HECTD1 EULIR HECT domain containing E3 ubiquitin protein ligase 1 protein-coding 0.000000 0.383513 561_WT_peak_3210-2 chr17 44271942 44272314 + 130 NA intron (NR_034172, intron 1 of 1) intron (NR_034172, intron 1 of 1) 1189 NR_034172 644246 Hs.644600 NR_034172 ENSG00000214401 KANSL1-AS1 - KANSL1 antisense RNA 1 ncRNA 0.021505 0.383378 -113(CAAAACTG,+,0.00),89(CGGTTTTA,-,0.00) 561_WT_peak_4873 chr22 30163192 30163638 + 130 NA promoter-TSS (NM_013387) promoter-TSS (NM_013387) 57 NM_001003684 29796 Hs.284292 NM_013387 HPRD:13691 UQCR10 HSPC051|HSPC151|QCR9|UCCR7.2|UCRC ubiquinol-cytochrome c reductase, complex III subunit X protein-coding 0.062780 0.557047 34(GGCGGCCGCG,+,0.00) 148(CGCGGACG,+,0.00) 263(TTTACCAG,-,0.00) -1(GGCGCGGT,-,0.00) 1(CGCGGTGGCGCG,+,0.00) 39(CCGCGACG,-,0.00) 561_WT_peak_3210 chr17 44271629 44271780 + 130 NA intron (NR_034172, intron 1 of 1) intron (NR_034172, intron 1 of 1) 765 NR_034172 644246 Hs.644600 NR_034172 ENSG00000214401 KANSL1-AS1 - KANSL1 antisense RNA 1 ncRNA 0.013245 0.421053 -144(TCCTGCCG,+,0.00) 561_WT_peak_5806 chr5 72456028 72456362 + 130 NA Intergenic Intergenic -12828 NM_153217 134288 Hs.508588 NM_153217 HPRD:14432 TMEM174 - transmembrane protein 174 protein-coding 0.011976 0.349254 123(AAAACAGGAAGC,+,0.00) 561_WT_peak_3797 chr19 45942878 45943243 + 130 NA Intergenic CpG -15883 NM_001166049 2067 Hs.435981 NM_001983 HPRD:00533 ERCC1 COFS4|RAD10|UV20 excision repair cross-complementation group 1 protein-coding 0.142466 0.751366 -51(CCGGGAGCCCGG,-,0.00),-44(CCCGGGAGGCGG,-,0.00),-43(CCGGGAGGCGGG,-,0.00),55(GCTCCTCCCCGG,+,0.00) -95(CCGACGCC,+,0.00),0(TCGAGGCC,+,0.00) -105(CGGACGCG,-,0.00),90(CGCGCACG,+,0.00) -4(CCGATCGA,+,0.00) -108(CGGCGGAC,+,0.00) 130(TTTACCCC,-,0.00) -152(GGCGCGGC,-,0.00) 112(CGCGGCGCCGCG,+,0.00),112(CGCGGCGCCGCG,-,0.00) 181(ATAGCGGCCC,-,0.00) -17(GTCCAGGGCGCC,-,0.00) 561_WT_peak_610 chr1 168482651 168482891 + 130 NA Intergenic Intergenic 30464 NM_003175 6846 Hs.458346 NM_003175 HPRD:05317 XCL2 SCM-1b|SCM1B|SCYC2 chemokine (C motif) ligand 2 protein-coding 0.029167 0.468880 561_WT_peak_819 chr1 243418190 243418660 + 130 NA promoter-TSS (NM_006642) promoter-TSS (NM_006642) 283 NM_001042405 9859 Hs.533635 NM_014812 HPRD:17172 CEP170 FAM68A|KAB|KIAA0470 centrosomal protein 170kDa protein-coding 0.131915 0.700637 -118(GGCGCCCGAG,+,0.00) -161(CCCCCTTCGCGG,+,0.00),14(CGGGGGAGGCGG,-,0.00) 85(TCGTCGCC,+,0.00) -137(CCCCCGCC,-,0.00),-130(CCCGCGGC,-,0.00) 101(CGTCGCTG,+,0.00) -99(CAAACCCG,+,0.00) 279(ACTGCGCA,+,0.00) -137(CCCCCGCCCCGC,-,0.00),-120(GCGGCGCCCGAG,+,0.00) -122(GGGCGGCGCC,+,0.00) -157(CTTCGCGG,+,0.00) -132(GCCCCGCGGC,-,0.00),-52(GCTGCGGCGC,+,0.00) 561_WT_peak_1357 chr11 65265234 65265461 + 130 NA non-coding (NR_002819, exon 1 of 1) non-coding (NR_002819, exon 1 of 1) 114 NR_002819 378938 Hs.621695 NR_002819 ENSG00000251562 MALAT1 HCN|LINC00047|MALAT-1|NCRNA00047|NEAT2|PRO2853|mascRNA metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) ncRNA 0.057269 0.600877 -107(TAGCAACG,-,0.00),-7(CAGCGACG,-,0.00) -87(GCCGGGAAGC,+,0.00) 561_WT_peak_2397 chr14 106873598 106873788 + 130 NA Intergenic Intergenic -64752 NR_027457 338005 Hs.322826 NR_027457 ENSG00000187156 LINC00221 C14orf98|NCRNA00221 long intergenic non-protein coding RNA 221 ncRNA 0.031579 0.638743 561_WT_peak_6935 chr8 19333002 19333350 + 130 NA intron (NR_024040, intron 3 of 9) intron (NR_024040, intron 3 of 9) 126880 NM_001130518 55790 Hs.613729 NM_018371 HPRD:13114 CSGALNACT1 CSGalNAcT-1|ChGn|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding 0.011494 0.446991 -23(AAGTGGTT,+,0.00) 561_WT_peak_6952 chr8 27631610 27631979 + 130 NA promoter-TSS (NM_001017420) promoter-TSS (NM_001017420) -264 NM_001017420 157570 Hs.99480 NM_001017420 HPRD:18564 ESCO2 2410004I17Rik|EFO2|RBS establishment of sister chromatid cohesion N-acetyltransferase 2 protein-coding 0.035230 0.475676 -97(AGAGGCCT,-,0.00) 191(GGGCTGGTGCTC,-,0.00) 83(GTCCGGCG,-,0.00) 182(GCGGGGCAAGGG,+,0.00) 561_WT_peak_107 chr1 24968948 24969440 + 130 NA promoter-TSS (NM_005839) promoter-TSS (NM_005839) -400 NM_005839 10250 Hs.18192 NM_005839 HPRD:10441 SRRM1 160-KD|POP101|SRM160 serine/arginine repetitive matrix 1 protein-coding 0.075203 0.596349 229(AGGCCTCT,+,0.00),320(AAGCCTCT,+,0.00) -113(CCCTCGCAGCCA,+,0.00) 51(CGAAACCG,+,0.00) 173(CTGGTAAA,+,0.00),181(CGCGTAAA,+,0.00) 220(GGAAGCCGCAGG,+,0.00) -52(CTTCTCGG,+,0.00),251(CCGCCTCG,-,0.00) -92(CACCAGGGCGGC,-,0.00) -113(CCCTCGCAGC,-,0.00),133(GCTGCCAGGC,+,0.00) 561_WT_peak_5930 chr5 134240616 134241419 + 130 NA intron (NM_032151, intron 1 of 3) CpG 207 NM_032151 84105 Hs.710014 NM_032151 PCBD2 DCOH2|DCOHM|PHS2 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 protein-coding 0.102117 0.674129 186(AGGCCCGGCGGC,+,0.00) 516(TGGCGGCT,+,0.00) -104(GCGGGAAGGCTG,-,0.00),270(CCGCGTCCCGGG,+,0.00),314(CCGGGGTGGCCG,-,0.00) 195(GGCGTCGG,-,0.00),258(GGCGTCGG,-,0.00) -66(CCGGGCCAGCCC,+,0.00),-38(GGGCTGGCGGTA,-,0.00) 559(AGGTTTTG,-,0.00) 3(TGGGCGGC,-,0.00) 103(GCGAGGCCAGAG,+,0.00) 238(GGGCCGAGCC,+,0.00) 78(CGACGCGG,+,0.00) 46(GCCAATGGCGGC,-,0.00),125(GCGGCCATGGTG,+,0.00),511(CCCTATGGCGGC,-,0.00) 100(GCTGCGAGGC,+,0.00),180(GGTGCGAGGC,+,0.00) 500(CGGGCCTGGCTC,+,0.00) 561_WT_peak_6142 chr6 26045594 26046204 + 130 NA exon (NM_003531, exon 1 of 1) exon (NM_003531, exon 1 of 1) 260 NM_003531 8352 Hs.248176 NM_003531 HPRD:11906 HIST1H3C H3.1|H3/c|H3FC histone cluster 1, H3c protein-coding 0.065574 0.531915 -115(CTCGTACG,+,0.00) 298(CCGTTTCTTCCT,-,0.00) -2(CATCGCTA,+,0.00),37(CGTCGCTA,+,0.00) 117(CAAAACCG,+,0.00) -72(TCCGCGCA,+,0.00) -50(AAAGCAGCCC,-,0.00) -82(GCGGCAAAGC,+,0.00) 561_WT_peak_5996 chr5 156698724 156699304 + 130 NA intron (NM_014376, intron 1 of 30) intron (NM_014376, intron 1 of 30) 2662 NM_014376 26999 Hs.519702 NM_014376 HPRD:07556 CYFIP2 PIR121 cytoplasmic FMR1 interacting protein 2 protein-coding 0.022414 0.540448 97(AGCCACCT,-,0.00) 33(CATACGCG,-,0.00) 202(AACACAGGAAGC,+,0.00) 561_WT_peak_3522 chr18 60867435 60867689 + 130 NA intron (NM_000633, intron 2 of 2) intron (NM_000633, intron 2 of 2) 119051 NM_000633 596 Hs.150749 NM_000633 HPRD:01045 BCL2 Bcl-2|PPP1R50 B-cell CLL/lymphoma 2 protein-coding 0.000000 0.400000 -65(GACACAGGAAAC,+,0.00) 561_WT_peak_6799 chr7 104585022 104585848 + 130 NA Intergenic Intergenic -18343 NR_027374 723809 Hs.124316 NR_027374 LHFPL3-AS2 - LHFPL3 antisense RNA 2 ncRNA 0.030266 0.529625 88(TAGAGACG,-,0.00) 606(CGGGAAAA,+,0.00) 28(CCGAGTAG,-,0.00),151(CCGCCTCG,-,0.00) 561_WT_peak_6005 chr5 158839338 158839668 + 130 NA Intergenic Intergenic 53781 NR_027110 285627 Hs.552766 NR_027110 ENSG00000253298 LOC285627 - uncharacterized LOC285627 ncRNA 0.015152 0.513595 25(TCCCAGCCCT,+,0.00) 22(CCCTCCCAGCCC,+,0.00) -92(CAGGTAAA,+,0.00) 561_WT_peak_3195 chr17 41561004 41561454 + 130 NA promoter-TSS (NM_004941) promoter-TSS (NM_004941) -105 NM_004941 1659 Hs.463105 NM_004941 HPRD:02672 DHX8 DDX8|HRH1|PRP22|PRPF22 DEAH (Asp-Glu-Ala-His) box polypeptide 8 protein-coding 0.071111 0.578714 -72(TCGCCCTCTGCC,+,0.00) 154(TGACCCGGAAGT,+,0.00) -62(CCGACCCA,+,0.00) -115(CTGTTTTG,-,0.00) -152(GATTCCTTTTTC,-,0.00),65(ACTTCCTGTTTG,-,0.00) 250(GTAGCCATGGCG,+,0.00),252(AGCCATGGCGGG,-,0.00) 561_WT_peak_783 chr1 228779466 228779659 + 130 NA promoter-TSS (NR_037962) promoter-TSS (NR_037962) -832 NR_037962 58480 Hs.647774 NM_021205 HPRD:06965 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding 0.067358 0.577320 561_WT_peak_4010 chr2 28974831 28975180 + 130 NA exon (NM_206876, exon 2 of 9) exon (NM_206876, exon 2 of 9) 379 NM_002709 5500 Hs.702907 NM_002709 HPRD:11792 PPP1CB HEL-S-80p|PP-1B|PP1B|PP1beta|PPP1CD protein phosphatase 1, catalytic subunit, beta isozyme protein-coding 0.123209 0.722857 -62(CTCCGCCGCC,-,0.00) 162(CTGGGAGCGCGG,-,0.00) -118(GGGGTCGA,-,0.00) 63(GCCGCGGG,+,0.00) 176(CGGCGGAC,+,0.00) -141(CGGGAAAA,+,0.00) 6(GGGAGCTGAACG,+,0.00) 172(GGCGCGGC,-,0.00) 169(CGCGGCGCGGCG,+,0.00),169(CGCGGCGCGGCG,-,0.00) -54(CCGAGAAG,-,0.00),-12(CCGACAAG,-,0.00),149(CCGAGACG,-,0.00) -32(GCTGGGAAGG,+,0.00) 561_WT_peak_2471 chr15 48469922 48470510 + 130 NA intron (NR_125408, intron 1 of 8) CpG 342 NR_125408 50804 Hs.6638 NM_016132 HPRD:14794 MYEF2 HsT18564|MEF-2|MST156|MSTP156|myEF-2 myelin expression factor 2 protein-coding 0.091837 0.706282 233(TCCGCCTCCGCG,+,0.00) 369(CTCGGCCGCC,-,0.00) 406(TGGCGGCT,+,0.00) 161(CCCGGTTCCCGG,+,0.00),234(CCGCCTCCGCGG,+,0.00),342(CCGCCATCCCGC,+,0.00) 267(CGCCCGGC,-,0.00) 356(CCGCTGCCTCCG,-,0.00) 55(GGAAGCCGATGG,+,0.00) 357(CGCTGCCTCCGC,-,0.00) 272(GGCGGCTCTGCG,-,0.00) 27(GGAGCGGCCC,-,0.00) -139(CGTGGCGG,+,0.00),365(CCGCCTCG,-,0.00) 401(GACAATGGCGGC,-,0.00) 30(GCGGCCCAGCTG,+,0.00),114(CAGCCCGGCCTC,-,0.00) 561_WT_peak_1878 chr12 120632493 120632904 + 130 NA promoter-TSS (NM_006836) promoter-TSS (NM_006836) -185 NM_006836 10985 Hs.298716 NM_006836 HPRD:16127 GCN1L1 GCN1|GCN1L|PRIC295 GCN1 general control of amino-acid synthesis 1-like 1 (yeast) protein-coding 0.087591 0.679612 -121(GCTTCCGGGTCA,-,0.00) -136(AACCGCTT,-,0.00) -43(CCGGGCAGGACG,-,0.00),-17(CCGGGCAGCCGG,-,0.00),34(CCTCCTCCCCAG,+,0.00) 158(CAGGGCCAGCCC,+,0.00) -157(TCCTGCCG,+,0.00) -72(GCGGGGGCAGGG,+,0.00),41(CCCAGGGCCCGC,-,0.00),157(GCAGGGCCAGCC,+,0.00) 127(GCCTTGCAGC,-,0.00) 561_WT_peak_6797 chr7 104583938 104584328 + 130 NA Intergenic Intergenic -17041 NR_027374 723809 Hs.124316 NR_027374 LHFPL3-AS2 - LHFPL3 antisense RNA 2 ncRNA 0.020513 0.511509 -67(AACCGGCT,+,0.00),132(AGAGGCCT,-,0.00) 561_WT_peak_1698 chr12 51441708 51441988 + 129 NA promoter-TSS (NR_045017) promoter-TSS (NR_045017) -234 NR_045019 25875 Hs.655272 NM_015416 HPRD:09978 LETMD1 1110019O13Rik|HCCR-1|HCCR-2|HCCR1|HCRR-2 LETM1 domain containing 1 protein-coding 0.057143 0.619217 44(GTTTCCGGCGCC,-,0.00) -114(CCGACGCC,+,0.00) -8(CGTCGCAA,+,0.00) -116(CTCCGACG,-,0.00) -85(GGGCGGCGCT,+,0.00) -11(CCGCGTCG,-,0.00) -78(GCTGGGAAGC,+,0.00) 561_WT_peak_5988 chr5 151150326 151151001 + 129 NA promoter-TSS (NM_198395) promoter-TSS (NM_198395) 406 NM_001278082 100652758 Hs.646665 NM_001278082 LOC100652758 - uncharacterized LOC100652758 protein-coding 0.082963 0.630178 140(CGCGGCCGCC,-,0.00),301(CTTGGCCGCC,-,0.00) 14(CCCGCGGC,-,0.00),138(CCCGCGGC,-,0.00) -8(TAGCGACG,-,0.00) 187(CACTCTCAGGCC,+,0.00) 475(CACAACCG,+,0.00) 479(ACCGCCCA,+,0.00) -32(GGGACGAGTT,+,0.00) 145(CCGCCTCG,-,0.00),159(CCGCCAAG,-,0.00) 489(GGGCACGGCGGC,-,0.00) 147(GCCTCGCAGC,-,0.00),260(GCCCCGCAGC,-,0.00) 561_WT_peak_2473 chr15 49170001 49170821 + 129 NA exon (NM_014335, exon 1 of 1) exon (NM_014335, exon 1 of 1) 121 NM_014335 23741 Hs.255973 NM_014335 HPRD:06907 EID1 C15orf3|CRI1|EID-1|IRO45620|PTD014|RBP21 EP300 interacting inhibitor of differentiation 1 protein-coding 0.069512 0.588307 382(GGAGGAGGAGGA,-,0.00),388(GGAGGAGGCCCA,-,0.00),496(GGACGAGGGCGA,-,0.00) 14(GCGACGCC,+,0.00) 624(GAGAACCAGCCC,+,0.00) 132(CGCACGCG,-,0.00),136(CGCGCACG,+,0.00) 562(TGGTGCCG,+,0.00) 117(AGCGCGCA,+,0.00),152(GCCGCGCA,+,0.00) 407(GCGGCGCCAGAG,+,0.00) 600(CCGACAAG,-,0.00) 400(GCCAATGGCGGC,-,0.00) 152(GCCGCGCAGC,-,0.00),345(GCAGCGGGGC,+,0.00),449(GCTGGGGAGC,+,0.00) 458(CAGCCAGGCCAG,-,0.00) 561_WT_peak_2528 chr15 67413566 67413802 + 129 NA intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) -4370 NM_001145102 4088 Hs.727986 NM_005902 HPRD:04380 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding 0.046610 0.670886 -154(CACGCGGCCC,-,0.00) -106(GCAGGCTGGCTG,+,0.00) 561_WT_peak_5653 chr4 186346752 186347289 + 129 NA exon (NM_018359, exon 1 of 12) exon (NM_018359, exon 1 of 12) 119 NR_028085 55325 Hs.713548 NM_018359 UFSP2 C4orf20 UFM1-specific peptidase 2 protein-coding 0.085661 0.630112 -112(GGTGGCCGAG,+,0.00) -164(AAGTCTCT,+,0.00),45(TGGCGGCT,+,0.00) 276(CGCGGACG,+,0.00) -72(CCCCCGGC,-,0.00) 4(CGGCAGGA,-,0.00),42(TCGTGGCG,+,0.00),238(CGGCATGA,-,0.00) 62(CGGGGAAA,+,0.00) 297(GGTAGCCGAAGA,+,0.00) -71(CCCCGGCCCAGC,-,0.00),196(GCGGGGCCCGGG,+,0.00) -40(AGAGCCGCCC,-,0.00) -106(CGAGGCGG,+,0.00),43(CGTGGCGG,+,0.00),109(CCGCGACG,-,0.00),115(CGTGGCGG,+,0.00),285(CGAGGCGG,+,0.00) -37(GCCGCCCTGCCC,+,0.00) 28(GCTGTGAAGC,+,0.00) 561_WT_peak_4933 chr22 41252710 41252995 + 129 NA promoter-TSS (NM_001204827) promoter-TSS (NM_001204827) 160 NM_003932 6767 Hs.712713 NM_003932 HPRD:08426 ST13 AAG2|FAM10A1|FAM10A4|HIP|HOP|HSPABP|HSPABP1|P48|PRO0786|SNC6 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) protein-coding 0.052632 0.552448 81(TCAACGCC,+,0.00) -91(TCGTGCTG,+,0.00) -127(TGCGCGCT,-,0.00) 561_WT_peak_2745 chr16 25269399 25269748 + 129 NA promoter-TSS (NM_001012981) promoter-TSS (NM_001012981) -718 NM_001012981 342357 Hs.513451 NM_001012981 HPRD:11268 ZKSCAN2 ZNF694|ZSCAN31|ZSCAN34 zinc finger with KRAB and SCAN domains 2 protein-coding 0.091691 0.685714 118(GGCCCTTCCCGG,+,0.00) 8(GCGGTCGG,-,0.00) 71(GGCGCGGC,-,0.00),128(GGCGCGGT,-,0.00) -144(CTAGGCGG,+,0.00) -137(GCGGCGGGGC,+,0.00) -132(GGGGCCTCCCTG,+,0.00),-101(GGGGCCTGGCTG,+,0.00) 561_WT_peak_5562 chr4 102436908 102437111 + 129 NA Intergenic MIRb|SINE|MIR 168075 NR_033874 90024 Hs.534513 NR_033874 ENSG00000254531 FLJ20021 - uncharacterized LOC90024 ncRNA 0.000000 0.303922 561_WT_peak_6611 chr7 22862650 22862860 + 129 NA promoter-TSS (NM_019059) promoter-TSS (NM_019059) -284 NM_019059 54543 Hs.112318 NM_019059 HPRD:16266 TOMM7 TOM7 translocase of outer mitochondrial membrane 7 homolog (yeast) protein-coding 0.014286 0.412322 561_WT_peak_1136 chr10 104404456 104404947 + 129 NA exon (NM_030912, exon 1 of 6) exon (NM_030912, exon 1 of 6) 449 NM_030912 81603 Hs.336810 NM_030912 HPRD:06934 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding 0.097760 0.678862 -63(GAAGCCGGGCCT,-,0.00) -107(AGCGGCCT,-,0.00) -101(CTCGTACG,+,0.00),-99(CGTACGCT,-,0.00) 102(GTCCCACG,-,0.00),291(GTGCGACG,-,0.00) 301(GAGATCCGAAGG,+,0.00) 58(CCCGCGCA,+,0.00) 11(CGCCGGCGGCGC,-,0.00),53(CGCTGCCCGCGC,-,0.00) 43(CGCGGCCCCCCG,-,0.00) 38(GCCGCCGCGGCC,+,0.00) 80(GCTGCGAGGC,+,0.00) 561_WT_peak_2890 chr16 70380397 70380969 + 129 NA promoter-TSS (NM_018332) promoter-TSS (NM_018332) -33 NR_039997 100506083 Hs.635008 NR_039997 ENSG00000261777 LOC100506083 - uncharacterized LOC100506083 ncRNA 0.083916 0.558464 225(GCTTCCGGTCCG,-,0.00) 374(AAGCGGCT,+,0.00) 388(TCGGTCAG,-,0.00) 251(TCGCGCCG,+,0.00) 220(CCGCCGCTTCCG,-,0.00) 280(TTGCGACG,-,0.00) 164(GCCGCGCA,+,0.00) 157(ACCTGGCGCCGC,-,0.00) 272(GGCCCGCGTT,+,0.00) -157(CTACTCGG,+,0.00),-93(CCGCCACG,-,0.00),341(CCGACTCG,-,0.00) 351(GGCCCTGGCGGT,-,0.00) 561_WT_peak_7097 chr8 103424613 103424984 + 129 NA 5' UTR (NM_001282873, exon 1 of 59) 5' UTR (NM_001282873, exon 1 of 59) 119 NM_001282873 51366 Hs.492445 NM_015902 HPRD:06436 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding 0.126685 0.758065 -128(GCAGGAGGGCGA,-,0.00) -144(CGGCCCGGAGGG,+,0.00) -69(GGCGGCCGGG,+,0.00),-13(GGCGGCCGGG,+,0.00) -132(GCGGGCAGGAGG,-,0.00),-103(CCGCTCCCCCGG,+,0.00) -136(AGGGGCGGGC,-,0.00) -160(GCCGGGCG,+,0.00),-98(CCCCCGGC,-,0.00),-9(GCCGGGGG,+,0.00),190(GGCGGGGG,+,0.00) 79(AGGAAGGAGGGG,+,0.00) 113(CGTCACTA,+,0.00) -4(GGGAGGAGAGGG,-,0.00) 49(CGGCGGAC,+,0.00) -95(CCGGCGACAGCG,+,0.00),170(CGCAGGCTCCGC,-,0.00) 180(GCTCCGGAGC,+,0.00),180(GCTCCGGAGC,-,0.00) 561_WT_peak_1928 chr12 133021456 133021827 + 129 NA Intergenic Intergenic -45516 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin-like 1 protein-coding 0.051213 0.634409 -34(AGGCCCGGAGCC,+,0.00) 125(AACCACTT,-,0.00) -159(CCCCCGCC,-,0.00) -95(CGGTTTGG,-,0.00),122(CAAAACCA,+,0.00) 139(CCGGGCCCAGCC,+,0.00) 177(GGCTCCGCCC,-,0.00) -151(GGCCAAGGCTGC,-,0.00) -39(CAGGCAGGCCCG,-,0.00) 561_WT_peak_5126 chr3 53164290 53164864 + 129 NA promoter-TSS (NM_052859) promoter-TSS (NM_052859) -107 NM_052859 91869 Hs.631910 NM_052859 HPRD:15239 RFT1 CDG1N RFT1 homolog (S. cerevisiae) protein-coding 0.057491 0.566957 152(TCGGTAGG,-,0.00) 79(GGGCACGA,-,0.00),116(TCGGGCCG,+,0.00) 193(CCCTCTCTTCCC,+,0.00) 157(AGGTTTTG,-,0.00) -71(GGGCCGCGTG,+,0.00) -76(CAGCCGGGCCGC,-,0.00) 561_WT_peak_918 chr10 25305733 25305923 + 129 NA promoter-TSS (NM_145010) promoter-TSS (NM_145010) 320 NM_024838 79896 Hs.645274 NM_024838 HPRD:07974 THNSL1 TSH1 threonine synthase-like 1 (S. cerevisiae) protein-coding 0.100000 0.638743 11(CGCGCACG,+,0.00) -118(TTTCCCCG,-,0.00) -22(GCCGCGCA,+,0.00) -38(CGAGGCTCCTCG,-,0.00) -7(CCGCCACG,-,0.00) -22(GCCGCGCAGC,-,0.00) -144(AAGCCAGCCCGC,-,0.00) 561_WT_peak_308 chr1 89149515 89149894 + 129 NA promoter-TSS (NM_006256) promoter-TSS (NM_006256) -218 NM_006256 5586 Hs.440833 NM_006256 HPRD:03972 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding 0.076517 0.584211 -30(AAGCCGTT,+,0.00) 18(CCGCCTCCCCAG,+,0.00) 128(CGCGTTCG,+,0.00) 162(TCCCTGCCCG,+,0.00) 92(CGCGGAGTCGGG,+,0.00) 561_WT_peak_1555 chr12 4381428 4382133 + 129 NA intron (NR_125790, intron 1 of 1) CpG -1122 NM_001759 894 Hs.376071 NM_001759 HPRD:00451 CCND2 KIAK0002 cyclin D2 protein-coding 0.082270 0.672805 51(TCCCCTTCCTCC,+,0.00) 451(AGACACCT,-,0.00) 396(TCCCCCTCCCGG,+,0.00),397(CCCCCTCCCGGG,+,0.00) 206(GGCGGCGA,-,0.00) -38(TCAGTCGG,-,0.00),195(CCGACCGT,+,0.00),458(TCGGGCGG,-,0.00) 518(GCCGCGGG,+,0.00) 260(CGAAACCG,+,0.00) 321(CGGGGAAA,+,0.00) 222(CAGTCGGCTCCC,-,0.00) 83(GGCGCGGT,-,0.00) 513(CGCTGGCCGCGG,-,0.00) -4(CACGCCATGCCC,+,0.00),-2(CGCCATGCCCGC,-,0.00) -116(CACCCAGCCCGC,-,0.00) 561_WT_peak_120 chr1 26705012 26705223 + 129 NA Intergenic Intergenic -5851 NM_173574 257101 Hs.353208 NM_173574 HPRD:14563 ZNF683 - zinc finger protein 683 protein-coding 0.004739 0.570755 -141(GGGCTGACAGTG,-,0.00) 561_WT_peak_4650 chr20 44718347 44718720 + 129 NA promoter-TSS (NM_020967) promoter-TSS (NM_020967) 47 NM_020967 57727 Hs.654991 NM_020967 HPRD:14813 NCOA5 CIA|bA465L10.6 nuclear receptor coactivator 5 protein-coding 0.134048 0.745989 73(GGCGGCCGGG,+,0.00) -156(GGGCCTTCCCGC,+,0.00) 175(GGCGTCGA,-,0.00) 109(CGCGCACG,+,0.00) 44(CCAACCGA,+,0.00),48(CCGACCGG,+,0.00) -68(TCCCGGCACT,+,0.00) 77(GCCGGGCG,+,0.00) 59(GGGCACGA,-,0.00) 80(GGGCGGAGAGTG,-,0.00),163(GGGCTGAGTTGG,-,0.00) 7(CGTCGGCC,+,0.00),26(CGTAGGAC,+,0.00) 140(CAAGACCG,+,0.00) 125(GGCGCGGC,-,0.00) 163(GGGCTGAGTT,+,0.00) 4(CCGCGTCG,-,0.00) 67(GGCAATGGCGGC,-,0.00) -71(GCTTCCCGGC,-,0.00) -129(CGGCCAGGCCCC,-,0.00),74(GCGGCCGGGCGG,+,0.00) 561_WT_peak_6374 chr6 74405395 74405797 + 129 NA promoter-TSS (NM_001159587) promoter-TSS (NM_001159587) -212 NM_001159587 135228 Hs.399891 NM_133493 HPRD:10590 CD109 CPAMD7|p180|r150 CD109 molecule protein-coding 0.057214 0.560794 89(GACGCCGGGCCA,-,0.00) 187(GGGATGGGAGGG,-,0.00) -161(CGGTTTTG,-,0.00) 84(GCTGGGACGC,+,0.00) 561_WT_peak_2705 chr16 14797089 14797330 + 129 NA Intergenic CpG -8337 NM_001277324 642799 NM_001277324 ENSG00000254852 NPIPA2 NPIP nuclear pore complex interacting protein family, member A2 protein-coding 0.091286 0.739669 60(GGGCCCGGGTTC,+,0.00) -131(GGCGGCGGAG,+,0.00) -135(CCGGGGCGGCGG,-,0.00) -159(CCGACAGA,+,0.00) 54(GCCGCGGG,+,0.00) 56(CGCGGGGCCCGG,-,0.00),57(GCGGGGCCCGGG,+,0.00) -64(GCTGCGGTGC,+,0.00),54(GCCGCGGGGC,+,0.00) 18(GCTTCCTGGCTG,+,0.00) 561_WT_peak_1833 chr12 104680629 104681116 + 129 NA 5' UTR (NM_182729, exon 1 of 15) 5' UTR (NM_182729, exon 1 of 15) 412 NM_182729 7296 Hs.654922 NM_003330 HPRD:03068 TXNRD1 GRIM-12|TR|TR1|TRXR1|TXNR thioredoxin reductase 1 protein-coding 0.063655 0.573770 -106(CTGCACGA,-,0.00),279(TCGTGGCG,+,0.00) 122(CAAAGCCG,+,0.00),291(CGGTTTCG,-,0.00) 108(CGGGTGAA,+,0.00) -15(GAAACAGCAACC,+,0.00) 207(CGTCTCGG,+,0.00) 561_WT_peak_1333 chr11 64546581 64547198 + 129 NA promoter-TSS (NM_004630) promoter-TSS (NM_004630) -573 NM_201995 7536 Hs.502829 NM_004630 HPRD:03306 SF1 BBP|D11S636|MBBP|ZCCHC25|ZFM1|ZNF162 splicing factor 1 protein-coding 0.048622 0.480583 237(CGAGGCGGGCGA,-,0.00) -77(AACCGGCT,+,0.00) 392(CCCGGGAGGCGG,-,0.00) -96(GGGCTGGCGCGC,-,0.00) 191(GCCGGGCG,+,0.00) 12(TAGAGACG,-,0.00),298(CGTCTCTA,+,0.00) -80(GAAAACCG,+,0.00) -57(CAGGTAAA,+,0.00) 395(GGGAGGCGGAGG,+,0.00) -46(ACTTCCTGTTTT,-,0.00) 195(GGCGCGGT,-,0.00) 237(CGAGGCGG,+,0.00) 561_WT_peak_5877 chr5 112196597 112196908 + 129 NA promoter-TSS (NM_003135) promoter-TSS (NM_003135) -133 NM_001204193 6728 Hs.637001 NM_003135 SRP19 - signal recognition particle 19kDa protein-coding 0.051447 0.506410 134(GGCGCCGA,-,0.00) 138(CCGAGCGA,+,0.00) -21(GAAACTGGAAAC,+,0.00) 561_WT_peak_2412 chr15 26327289 26327589 + 129 NA Intergenic tRNA-Glu-GAG_|tRNA|tRNA -33521 NR_038851 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA 0.060000 0.508306 -55(GAACCCGGGCCG,-,0.00),115(GCTTTCGGTGCT,-,0.00) -61(GGAGTCGA,-,0.00) 108(TGCGCGGG,-,0.00) -47(GCCGCCTGGGTG,+,0.00) 561_WT_peak_102 chr1 24069956 24070266 + 129 NA intron (NM_003198, intron 1 of 10) CpG 255 NM_003198 6924 Hs.15535 NM_003198 HPRD:02873 TCEB3 EloA|SIII|SIII p110|TCEB3A transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A) protein-coding 0.145161 0.745981 -124(GGCGGCGGAG,+,0.00) -155(CCGGCGAGGAGG,-,0.00) 127(GGCGTCGG,-,0.00) -16(TGGGTCGG,-,0.00) 12(CGGCCCGA,-,0.00) 122(CGTCGGGC,+,0.00) -144(GCCGCGCC,+,0.00) -120(GCGGAGTCGGCG,+,0.00),11(GCGGCCCGAGCG,+,0.00),51(GCCAGGCCCCGC,-,0.00),96(CGCTGCCCGCGC,-,0.00) 21(CGTGGCGG,+,0.00) -130(AGCGATGGCGGC,-,0.00) 49(GAGCCAGGCCCC,-,0.00) 561_WT_peak_3008 chr17 7118330 7118568 + 129 NA intron (NM_001365, intron 3 of 21) intron (NM_001365, intron 3 of 21) -1995 NM_001270447 37 Hs.437178 NM_000018 HPRD:01940 ACADVL ACAD6|LCACD|VLCAD acyl-CoA dehydrogenase, very long chain protein-coding 0.021008 0.589958 59(TCCACGCC,+,0.00) -66(AGCGCCATGGGC,+,0.00) 561_WT_peak_4101 chr2 64441600 64441962 + 129 NA Intergenic Intergenic -9162 NR_033837 150992 Hs.272318 NR_033837 ENSG00000230923 LINC00309 NCRNA00309 long intergenic non-protein coding RNA 309 ncRNA 0.002762 0.399449 561_WT_peak_4540 chr20 1447104 1447678 + 129 NA exon (NM_001206736, exon 1 of 9) exon (NM_001206736, exon 1 of 9) 946 NM_016143 55968 Hs.12865 NM_016143 HPRD:09425 NSFL1C P47|UBX1|UBXD10|UBXN2C|dJ776F14.1 NSFL1 (p97) cofactor (p47) protein-coding 0.141115 0.753043 13(TTCGGCCGCC,-,0.00),190(CTCCGCCGCC,-,0.00) -89(CCGCGTTCCCCC,+,0.00) 146(TCGGCGCC,+,0.00) -103(TGGCTGGGGCTG,-,0.00),-97(GGGCTGGCCCGC,-,0.00),245(CAGGCCCAGCCC,+,0.00) -24(TGGGTCGG,-,0.00),110(CCGGCCGA,+,0.00) 20(GCCGCGGG,+,0.00) -20(TCGGGCCG,+,0.00),160(CGCCACGA,-,0.00) 122(AGAAAGAAGCGG,+,0.00) 88(CGGCGCTA,+,0.00) -152(CGCTGACGCCGC,-,0.00) 378(CGCCGCTCCGCG,-,0.00) -92(GGCCCGCGTT,+,0.00),-18(GGGCCGCGGT,+,0.00),328(AGCCCCGCCC,-,0.00) 114(CCGACTCG,-,0.00),159(CCGCCACG,-,0.00) 189(GCTCCGCCGC,-,0.00),253(GCCCCGCTGC,-,0.00),374(GCCCCGCCGC,-,0.00) 561_WT_peak_3963 chr2 10760692 10760885 + 129 NA intron (NR_048552, intron 12 of 19) intron (NR_048552, intron 12 of 19) 69325 NM_024894 79954 Hs.222494 NM_024894 HPRD:07849 NOL10 PQBP5 nucleolar protein 10 protein-coding 0.000000 0.371134 561_WT_peak_1378 chr11 66115523 66115799 + 129 NA promoter-TSS (NM_006876) promoter-TSS (NM_006876) -500 NM_006876 11041 Hs.8526 NM_006876 HPRD:09270 B3GNT1 B3GN-T1|B3GNT6|BETA3GNTI|MDDGA13|iGAT|iGNT UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1 protein-coding 0.043478 0.527076 -91(GGTGGCCGAG,+,0.00) -101(CGTAGGAC,+,0.00),-19(CGTCGGCC,+,0.00) 561_WT_peak_2518 chr15 66084819 66085123 + 129 NA promoter-TSS (NM_005848) promoter-TSS (NM_005848) -340 NM_001144823 10260 Hs.654567 NM_005848 HPRD:02662 DENND4A IRLB|MYCPBP DENN/MADD domain containing 4A protein-coding 0.055921 0.577049 -38(CTTCCTCCCCGG,+,0.00) 98(CCGAGTAG,-,0.00) 561_WT_peak_2013 chr13 42535078 42535573 + 129 NA promoter-TSS (NR_039974) promoter-TSS (NR_039974) 20 NR_039974 100507240 Hs.147766 NR_039974 VWA8-AS1 - VWA8 antisense RNA 1 (head to head) ncRNA 0.107071 0.701613 -161(AGCCGCAT,-,0.00) -86(CCGGGGGGGCTG,-,0.00) 121(GAGCTCCAGCCC,+,0.00) 70(GCCCGGCCCT,+,0.00) -87(GCCGGGGG,+,0.00),41(CCCGCGGC,-,0.00) 21(GTCCGCCG,-,0.00) 253(TTCACCCG,-,0.00) -4(GGGACAGGAAGC,+,0.00) 46(GGCGCGGC,-,0.00) 47(GCGCGGCCGGCT,+,0.00) 69(AGCCCGGCCC,-,0.00) -138(GCCGCCGTGGCC,+,0.00) -151(GCCGCGAGGC,+,0.00),115(CCTGCGGAGC,+,0.00),182(GCTGCGGCGC,+,0.00) -145(AGGCCGGGCCGC,-,0.00) 561_WT_peak_6546 chr6 160147810 160148284 + 129 NA promoter-TSS (NM_004906) promoter-TSS (NM_004906) 17 NM_152858 9589 Hs.446091 NM_004906 HPRD:09259 WTAP - Wilms tumor 1 associated protein protein-coding 0.094937 0.669474 169(CTCGGCCGCT,-,0.00) -56(TCGCCGCC,+,0.00),280(TCGAGGCC,+,0.00) 156(GCCCGCCCCT,+,0.00) -64(CCCGCGGC,-,0.00) 12(CGTCACGA,-,0.00),62(CCGCACGA,-,0.00) 300(GGCCGACG,-,0.00) -54(GCCGCCCA,+,0.00) 151(CGCTGGCCCGCC,-,0.00),202(CCGGGGCCCGCG,+,0.00) -62(CGCGGCTCGCCG,-,0.00) -15(CCGACACG,-,0.00) 41(GCCGCCTTCGCC,+,0.00) 74(GCCCCGCAGC,-,0.00) 561_WT_peak_1621 chr12 14956212 14956436 + 129 NA promoter-TSS (NM_016312) promoter-TSS (NM_016312) 77 NM_016312 51729 Hs.655138 NM_016312 HPRD:18293 WBP11 NPWBP|PPP1R165|SIPP1|WBP-11 WW domain binding protein 11 protein-coding 0.071429 0.577778 -161(AAGCCGCT,+,0.00) -154(TGCGCGGG,-,0.00) 561_WT_peak_4816 chr21 44527219 44527739 + 129 NA intron (NM_001025203, intron 1 of 7) CpG 209 NM_006758 7307 Hs.365116 NM_006758 HPRD:01871 U2AF1 FP793|RN|RNU2AF1|U2AF35|U2AFBP U2 small nuclear RNA auxiliary factor 1 protein-coding 0.150000 0.748560 127(CCACCCTGCGCC,+,0.00) -130(CGACTCGGAGGC,+,0.00),26(GGGGCCGGAAGG,+,0.00) -71(CTCGGCCGCG,-,0.00) -150(AGGCGGCT,+,0.00) 44(GCTCCTTCCCGC,+,0.00),95(GGGCCTCCCCGG,+,0.00) 243(GCCGTCGA,-,0.00),259(CCGACGCC,+,0.00),277(CCGACGCC,+,0.00) 79(CCGCGCCGGCCC,+,0.00) 301(CGGACGCG,-,0.00) 67(CCCCCGCC,-,0.00),153(CCCCCGGC,-,0.00),158(GGCGGGGG,+,0.00) -157(CGGCTCGA,-,0.00) 42(CCGCTCCTTCCC,-,0.00) -113(CGTCGGGC,+,0.00) 78(GCCGCGCC,+,0.00) 230(CGCCGCCGCCGC,-,0.00) -65(CGCGGCGCCCCG,+,0.00),-65(CGCGGCGCCCCG,-,0.00) -152(CGAGGCGG,+,0.00),-130(CGACTCGG,+,0.00),-2(CGAGGCGG,+,0.00) -102(CAGCCAGTCCGG,-,0.00),84(CCGGCCCGCCTG,+,0.00) 561_WT_peak_4296 chr2 130939318 130939541 + 129 NA promoter-TSS (NM_001171083) promoter-TSS (NM_001171083) -72 NM_025029 80097 Hs.469925 NM_025029 HPRD:07857 MZT2B FAM128B|MOZART2B mitotic spindle organizing protein 2B protein-coding 0.080717 0.602679 -41(CCGCCCGCCCCG,+,0.00) -87(CGCGTGCG,+,0.00),-85(CGTGCGCG,-,0.00),-81(CGCGTAAG,+,0.00) -44(CCCCCGCC,-,0.00) -127(CCTCCGGCGCCC,-,0.00) -28(AAAGCGACCC,-,0.00) 561_WT_peak_7103 chr8 103876001 103876539 + 129 NA 5' UTR (NM_148174, exon 1 of 12) 5' UTR (NM_148174, exon 1 of 12) 127 NM_148174 51582 Hs.459106 NM_015878 HPRD:07443 AZIN1 OAZI|OAZIN|ODC1L antizyme inhibitor 1 protein-coding 0.083643 0.601113 46(GGCGGCCGAA,+,0.00) -102(AAGCGTCT,+,0.00) 242(GCGACGCC,+,0.00) 240(CAGCGACG,-,0.00) 94(GGGCTGGGTGGG,-,0.00) -108(CGGGTAAA,+,0.00),-1(GGGGTAAA,+,0.00) 46(GGCGGCCGAAGG,+,0.00) 233(GCGGCGCCAGCG,+,0.00) 294(CGGGCAGCCGCG,+,0.00) -41(ACCCAAGGCGGC,-,0.00) 92(GCGGGCTGGGTG,+,0.00) 561_WT_peak_6514 chr6 149866909 149867487 + 129 NA promoter-TSS (NM_139126) promoter-TSS (NM_139126) 40 NM_139126 85313 Hs.744238 NM_139126 HPRD:07606 PPIL4 HDCME13P peptidylprolyl isomerase (cyclophilin)-like 4 protein-coding 0.105536 0.647668 100(GGAGGAGGGGGG,-,0.00),103(GGAGGGGGGTGA,-,0.00),117(GGCGCAGGCCGA,-,0.00) 96(CCCGGGAGGAGG,-,0.00),97(CCGGGAGGAGGG,-,0.00) 130(GGCGTCGT,-,0.00),137(TCTACGCC,+,0.00) 216(CCGGTCGG,-,0.00) 273(CCCCCGGC,-,0.00) 157(CGGCGCGA,-,0.00) 98(CGGGAGGAGGGG,+,0.00) 123(GGCCGACG,-,0.00) 285(CCGTTTTG,-,0.00),314(CGATTTTG,-,0.00) -75(ACTGCGCA,+,0.00),278(GGCGCGGC,-,0.00) 182(CGCCGGCGCCGC,-,0.00),188(CGCCGCCCCCGG,-,0.00) 186(GGCGCCGCCC,-,0.00),391(AGAGCGGCCC,-,0.00) 61(ACCGCCATGGCG,+,0.00),63(CGCCATGGCGCC,-,0.00) 561_WT_peak_4720 chr20 61733542 61733957 + 129 NA promoter-TSS (NR_003245) promoter-TSS (NR_003245) -78 NR_003245 768097 Hs.635159 NR_003245 ENSG00000231133 HAR1B HAR1R|LINC00065|NCRNA00065 highly accelerated region 1B (non-protein coding) ncRNA 0.122892 0.680288 15(CCCTCCGGTCCG,-,0.00) 122(GGGGCCGGGA,-,0.00) 4(CGCCCGGC,-,0.00),41(CCCGCGGC,-,0.00) 47(GCGTGCCG,+,0.00) -51(TTTAACCG,-,0.00) -27(GCCGCGCC,+,0.00) 225(GCGGGCCGAGCG,+,0.00) -28(CGCCGCGCCGCG,+,0.00),-28(CGCCGCGCCGCG,-,0.00),65(CGCGGAGCCACC,+,0.00) 240(AGAGCGGCCC,-,0.00) 218(CCGACACG,-,0.00) 195(GCCCAGGGCGCC,-,0.00) 153(GCTCCGCACC,-,0.00) 561_WT_peak_3054 chr17 16593273 16593553 + 129 NA promoter-TSS (NM_014695) promoter-TSS (NM_014695) -226 NM_014695 9720 Hs.745246 NM_014695 ENSG00000170160 CCDC144A - coiled-coil domain containing 144A protein-coding 0.032143 0.622776 73(GGGCAGGCGCAC,-,0.00) 561_WT_peak_7482 chr9 139294629 139294866 + 129 NA Intergenic CpG -1858 NM_003086 6621 Hs.113265 NM_003086 HPRD:04146 SNAPC4 PTFalpha|SNAP190 small nuclear RNA activating complex, polypeptide 4, 190kDa protein-coding 0.143460 0.764706 -34(CGCGGCCGCC,-,0.00) -94(CCGGGACGGCCG,-,0.00) -53(CGGCTCGA,-,0.00) -30(GCCGCCCTGGGG,+,0.00) -80(GCGGCCTGCCGG,+,0.00) 561_WT_peak_2314 chr14 81687468 81687973 + 129 NA promoter-TSS (NM_015859) promoter-TSS (NM_015859) -145 NM_201595 2957 Hs.592334 NM_015859 HPRD:02748 GTF2A1 TF2A1|TFIIA|TFIIA-42|TFIIAL general transcription factor IIA, 1, 19/37kDa protein-coding 0.085149 0.561265 88(CCGCGGAGGAGG,-,0.00) 211(CGTTCGCG,-,0.00) 73(CCTCGCTA,+,0.00) -153(AAATCGGACC,-,0.00) 203(CTTCGCGG,+,0.00) 202(GCTTCGCGGC,-,0.00) 561_WT_peak_4330 chr2 152145803 152146651 + 129 NA 5' UTR (NM_004688, exon 1 of 8) 5' UTR (NM_004688, exon 1 of 8) 203 NM_004688 9111 Hs.54483 NM_004688 HPRD:04632 NMI - N-myc (and STAT) interactor protein-coding 0.062500 0.542992 246(AGGCCCGGGTTC,+,0.00) 0(CCGGGGAGCAGG,-,0.00) -98(TCGAAGCC,+,0.00) 177(GCGCGCCTGCCC,+,0.00) 141(CGCGTCCG,+,0.00) 37(TCCGTCGG,-,0.00) 72(CCCCCGGC,-,0.00),287(GCCGCGGG,+,0.00) 503(TGGTTTTG,-,0.00) 237(GGGAGGGGAAGG,+,0.00) -21(CGACTCGG,+,0.00) 561_WT_peak_2321 chr14 90722760 90723303 + 129 NA intron (NM_002802, intron 1 of 10) CpG 137 NM_002802 5700 Hs.356654 NM_002802 HPRD:04084 PSMC1 P26S4|S4|p56 proteasome (prosome, macropain) 26S subunit, ATPase, 1 protein-coding 0.081031 0.643382 95(AGGCGGCT,+,0.00),297(AGGCCGCT,+,0.00) 234(GGGCCGGGGCTC,-,0.00) 204(CCGACCAA,+,0.00) -63(CGTCCCTA,+,0.00) 51(CGTCGCGG,+,0.00),148(CTTCTCGG,+,0.00) -42(CTGGCGGGCCGC,-,0.00) 561_WT_peak_4832 chr22 19109689 19109916 + 129 NA non-coding (NR_033674, exon 1 of 9) non-coding (NR_033674, exon 1 of 9) 165 NR_033674 9993 Hs.517357 NM_005137 HPRD:08999 DGCR2 DGS-C|IDD|LAN|SEZ-12 DiGeorge syndrome critical region gene 2 protein-coding 0.096916 0.706140 15(GGGCTGGCGCAC,-,0.00) 10(GCCGCGGG,+,0.00) -23(CGCGGAGAGGCG,+,0.00) 13(GCGGGCTGGCGC,+,0.00) 561_WT_peak_1089 chr10 91093694 91094035 + 129 NA intron (NM_001031683, intron 1 of 1) intron (NM_001031683, intron 1 of 1) 1628 NM_001031683 3437 Hs.47338 NM_001549 HPRD:05228 IFIT3 CIG-49|GARG-49|IFI60|IFIT4|IRG2|ISG60|P60|RIG-G interferon-induced protein with tetratricopeptide repeats 3 protein-coding 0.002933 0.473684 18(AGCCACTT,-,0.00) 561_WT_peak_2990 chr17 4607077 4607825 + 129 NA promoter-TSS (NR_103482) promoter-TSS (NR_103482) -74 NR_103482 101559451 Hs.634966 NR_103482 ENSG00000244184 LOC101559451 - uncharacterized LOC101559451 ncRNA 0.092246 0.658211 -158(TGCACCGTAATC,+,0.00) -108(GCGGGCACGCGG,-,0.00) 335(GGCGCCGA,-,0.00) -73(CCCACCGA,+,0.00),-69(CCGACCCA,+,0.00) -111(GCCGCGGG,+,0.00),69(GCCGCGGG,+,0.00) 457(CGGAACGA,-,0.00) 398(GTCCGAGG,-,0.00) -16(CGGTTTGG,-,0.00),256(CGGTCTTG,-,0.00) -36(CGGGCAAA,+,0.00) -133(GCCGCGCC,+,0.00),315(TGCGCGGA,-,0.00) 63(GGCGGAGCCGCG,+,0.00) 212(CCGCGACG,-,0.00),401(CGAGGCGG,+,0.00) 122(GCCGCGGAGC,+,0.00),301(GCTGGGAAGG,+,0.00) 328(CAGCCTGGGCGC,-,0.00) 561_WT_peak_7393 chr9 114800060 114800365 + 129 NA intron (NR_036085, intron 3 of 3) intron (NR_036085, intron 3 of 3) 105832 NR_039814 100616114 NR_039814 MIR4668 - microRNA 4668 ncRNA 0.003279 0.421569 561_WT_peak_2666 chr16 3124969 3125619 + 128 NA Intergenic Intergenic 9509 NM_001012636 9235 Hs.943 NM_004221 HPRD:09346 IL32 IL-32alpha|IL-32beta|IL-32delta|IL-32gamma|NK4|TAIF|TAIFa|TAIFb|TAIFc|TAIFd interleukin 32 protein-coding 0.013846 0.514593 -10(GGGCCCGGAAGC,+,0.00) 227(AAGTCTCT,+,0.00) 474(GGGGCCTCCCTG,+,0.00) 561_WT_peak_7362 chr9 98778276 98778871 + 128 NA 3' UTR (NM_020207, exon 19 of 19) 3' UTR (NM_020207, exon 19 of 19) 5464 NR_024129 100188953 Hs.434310 NR_024129 ENSG00000225194 LINC00092 NCRNA00092|bA346B7.1 long intergenic non-protein coding RNA 92 ncRNA 0.001681 0.407718 561_WT_peak_3465 chr18 21509613 21509866 + 128 NA intron (NM_198129, intron 64 of 74) intron (NM_198129, intron 64 of 74) 56755 NM_000227 3909 Hs.436367 NM_000227 HPRD:02883 LAMA3 BM600|E170|LAMNA|LOCS|lama3a laminin, alpha 3 protein-coding 0.007905 0.417323 561_WT_peak_3535 chr18 76828547 76829000 + 128 NA promoter-TSS (NM_198531) promoter-TSS (NM_198531) -624 NM_198531 374868 Hs.465475 NM_198531 HPRD:16528 ATP9B ATPASEP|ATPIIB|NEO1L|hMMR1 ATPase, class II, type 9B protein-coding 0.108168 0.687225 106(CGAGGAGGGCGC,-,0.00) 144(CGCGTACT,+,0.00) 53(GGGCACCGAAGG,+,0.00) 87(GAAGCAAGAAGC,+,0.00) -58(GGCGCGGT,-,0.00) 229(GCTGCGAGGC,+,0.00) 561_WT_peak_6541 chr6 159291044 159291336 + 128 NA Intergenic CpG -12526 NR_028496 202459 Hs.487035 NM_145303 HPRD:14130 OSTCP1 DC2L|OSTCL oligosaccharyltransferase complex subunit pseudogene 1 pseudo 0.078767 0.600683 87(TCGACGGC,+,0.00) -98(GTCCGAGG,-,0.00),-77(CGTCGCAC,+,0.00) 561_WT_peak_7042 chr8 67445864 67446152 + 128 NA Intergenic Intergenic 40517 NM_152765 254778 Hs.268869 NM_152765 HPRD:14565 C8orf46 - chromosome 8 open reading frame 46 protein-coding 0.024306 0.453287 110(CCGCCTTCCCCG,+,0.00) 561_WT_peak_5100 chr3 48955834 48956173 + 128 NA promoter-TSS (NM_006321) promoter-TSS (NM_006321) -278 NM_006321 10425 Hs.633601 NM_006321 HPRD:09286 ARIH2 ARI2|TRIAD1 ariadne RBR E3 ubiquitin protein ligase 2 protein-coding 0.088496 0.614706 -41(AGCGGCCGAG,+,0.00) 104(TAGTGGCT,+,0.00) 122(TCGGCGCC,+,0.00) 118(GCGGTCGG,-,0.00) -69(TCCCGGCCCA,+,0.00) 83(CGGGAGACGCTG,+,0.00) -93(CCGCCTCG,-,0.00) 561_WT_peak_4747 chr21 15918423 15918817 + 128 NA promoter-TSS (NM_001286523) promoter-TSS (NM_001286523) 61 NM_001286523 64092 Hs.473341 NM_022136 HPRD:06413 SAMSN1 HACS1|NASH1|SASH2|SH3D6B|SLy2 SAM domain, SH3 domain and nuclear localization signals 1 protein-coding 0.000000 0.356962 561_WT_peak_6027 chr5 175080177 175080542 + 128 NA Intergenic Intergenic -4681 NM_001131055 3274 Hs.247885 NM_022304 HPRD:00816 HRH2 H2R histamine receptor H2 protein-coding 0.008219 0.404372 152(AGAGGCCT,-,0.00),154(AGGCCTCT,+,0.00) 561_WT_peak_1912 chr12 123942587 123943009 + 128 NA intron (NR_104103, intron 1 of 1) CpG 147 NM_022717 11066 Hs.632738 NM_007020 SNRNP35 HM-1|U1SNRNPBP small nuclear ribonucleoprotein 35kDa (U11/U12) protein-coding 0.080569 0.626478 21(AAGCGGCT,+,0.00),22(AGCGGCTT,-,0.00),231(AGCGGCCT,-,0.00) -103(GGCGGCGA,-,0.00),234(GGCCTCGA,-,0.00) -18(TCCGTCGG,-,0.00) 223(GGCGGGGG,+,0.00) 29(TGGAAGGAGCGG,+,0.00) -16(CGTCGGAA,+,0.00) -8(GGGAGCCCAAGC,+,0.00),198(CCTGCGGCCCCC,-,0.00) -122(CAAACAGGAAAC,+,0.00) 81(CGCTGTGCCCGC,-,0.00) 224(GCGGGGGAGC,+,0.00) 561_WT_peak_348 chr1 108113180 108113530 + 128 NA TTS (NM_001079874) TTS (NM_001079874) 117771 NM_001079874 10451 Hs.267659 NM_006113 HPRD:05706 VAV3 - vav 3 guanine nucleotide exchange factor protein-coding 0.045714 0.549858 6(TGAACCGGACTC,+,0.00) -117(GCCCTGCCCT,+,0.00) -120(GGCGCCCTGCCC,+,0.00) 561_WT_peak_6311 chr6 37150856 37151356 + 128 NA Intergenic Intergenic 13184 NM_001243186 5292 Hs.81170 NM_002648 HPRD:01292 PIM1 PIM Pim-1 proto-oncogene, serine/threonine kinase protein-coding 0.008000 0.510978 -121(AGCCACCT,-,0.00) 10(TGGGCCTGGCTG,+,0.00) 561_WT_peak_491 chr1 149783535 149783975 + 127 NA exon (NM_001161334, exon 1 of 2) exon (NM_001161334, exon 1 of 2) 173 NM_001161334 440689 Hs.632451 NM_001024599 HPRD:18639 HIST2H2BF - histone cluster 2, H2bf protein-coding 0.090909 0.575964 201(AGAGACTT,-,0.00) 95(TCTTGCCG,+,0.00) -163(CCTCGGAC,+,0.00) 231(CAAAACGG,+,0.00) -63(CAGGCGGGACGC,-,0.00) 561_WT_peak_1223 chr11 17098931 17099806 + 127 NA promoter-TSS (NM_001017) promoter-TSS (NM_001017) -148 NM_001017 6207 Hs.446588 NM_001017 HPRD:01604 RPS13 S13 ribosomal protein S13 protein-coding 0.065143 0.599315 -156(CTCCCCGGATTC,+,0.00) -41(TGGCGGCT,+,0.00),584(AGCGGCTA,-,0.00) -160(CCCCCTCCCCGG,+,0.00) -108(TGCGTCGA,-,0.00),97(GGCGGCGA,-,0.00),361(TGCGTCGA,-,0.00),378(TGGACGCC,+,0.00) 33(CCCCCGCC,-,0.00) 440(TGGAAGAAGCAG,+,0.00) -106(CGTCGATA,+,0.00),266(CGTCGCAA,+,0.00) -99(AGGGTAAA,+,0.00) 213(GCTGCGCA,+,0.00),215(TGCGCAGC,-,0.00),591(ACCGCCCA,+,0.00) -6(CCCTCGGCCCGC,-,0.00) 575(AGCCATGGCAGC,-,0.00) 213(GCTGCGCAGC,+,0.00),213(GCTGCGCAGC,-,0.00) 561_WT_peak_4497 chr2 233414912 233415669 + 127 NA promoter-TSS (NR_049797) promoter-TSS (NR_049797) -7 NR_049797 100847037 NR_049797 miRBase:MI0017867 MIR5001 - microRNA 5001 ncRNA 0.095112 0.670185 525(GGAGGAGGGGGC,-,0.00) 220(TAGCCGCT,+,0.00),221(AGCCGCTT,-,0.00) 473(CCGGCTTCCCTG,+,0.00),521(GCGGGGAGGAGG,-,0.00) 347(GGCGGCGA,-,0.00),372(TCGACGCG,+,0.00) 427(CCGCGCCCGCCC,+,0.00),445(GGGCTGGGGCGG,-,0.00) -66(GCGACCGA,+,0.00),576(CCGTCCGA,+,0.00) 370(GTTCGACG,-,0.00) 229(CCAAACCG,+,0.00),270(CAAAACCG,+,0.00) 189(TGCGCAGC,-,0.00),264(CCCGCGCA,+,0.00) 49(CGACGCGG,+,0.00) -112(TCTGCGAAGC,+,0.00),165(GCTCCGCCGC,-,0.00),535(GCTGGGGAGC,+,0.00) 561_WT_peak_2999 chr17 5094897 5095188 + 127 NA promoter-TSS (NR_034082) promoter-TSS (NR_034082) 136 NM_032530 84622 Hs.658402 NM_032530 ENSG00000180626 ZNF594 - zinc finger protein 594 protein-coding 0.096220 0.719178 -55(CGCGGCCGCC,-,0.00) -118(AGGCCTCT,+,0.00) 7(TCGGTCGG,-,0.00) -64(CGCAGGCGCCGC,-,0.00) 44(CGCGGCTCCTAG,-,0.00) 561_WT_peak_67 chr1 14056855 14057765 + 127 NA intron (NM_001135610, intron 2 of 7) intron (NM_001135610, intron 2 of 7) -18566 NM_001007257 7799 Hs.371823 NM_012231 HPRD:03120 PRDM2 HUMHOXY1|KMT8|MTB-ZF|RIZ|RIZ1|RIZ2 PR domain containing 2, with ZNF domain protein-coding 0.012088 0.452250 582(AGACCCGGATTG,+,0.00) 231(AGGTGGCT,+,0.00) 700(TTTACCCT,-,0.00) 361(GCTTCAGGTTTC,-,0.00) 561_WT_peak_135 chr1 28051920 28052195 + 127 NA promoter-TSS (NM_001143914) promoter-TSS (NM_001143914) -433 NM_152660 199870 Hs.469359 NM_152660 HPRD:14583 FAM76A - family with sequence similarity 76, member A protein-coding 0.058182 0.572464 561_WT_peak_2964 chr17 685201 685545 + 127 NA promoter-TSS (NM_018146) promoter-TSS (NM_018146) -140 NM_018146 55178 Hs.182729 NM_018146 HPRD:15266 RNMTL1 - RNA methyltransferase like 1 protein-coding 0.101744 0.649275 -33(CCTCCCTCCGCC,+,0.00) -13(CTCGGGCGCC,-,0.00) 81(AAGCGGTT,+,0.00) 9(GCGCGCCAGCCC,+,0.00) -35(CCCCTCCCTCCG,-,0.00) 19(CCCTGTCGGCCC,+,0.00) -77(GGTCGGAC,+,0.00) -93(ACCGCGCA,+,0.00) -27(TCCGCCAGGGCC,+,0.00) 561_WT_peak_5268 chr3 135969192 135969416 + 127 NA exon (NM_001178014, exon 1 of 16) exon (NM_001178014, exon 1 of 16) 137 NM_001178014 5096 Hs.63788 NM_000532 HPRD:01982 PCCB - propionyl CoA carboxylase, beta polypeptide protein-coding 0.129464 0.680000 -114(GCGGTCGG,-,0.00) -12(CGCCGGAC,+,0.00) -67(GGTCCGCAGC,-,0.00) -52(CAGCCAGGCCAC,-,0.00) 561_WT_peak_6491 chr6 138036889 138037197 + 127 NA Intergenic MIR|SINE|MIR 23131 NR_121618 100507406 Hs.556703 NR_121618 ENSG00000234956 LOC100507406 - uncharacterized LOC100507406 ncRNA 0.009740 0.414239 -55(GGGTTTTG,-,0.00) 561_WT_peak_6062 chr5 180648927 180649600 + 127 NA promoter-TSS (NM_201627) promoter-TSS (NM_201627) 370 NR_039781 100616342 NR_039781 miRBase:MI0017265 MIR4638 - microRNA 4638 ncRNA 0.062407 0.553412 -58(CCGACTGA,+,0.00) -46(GCCGGGCG,+,0.00) 391(TCCTGCCG,+,0.00) 420(CGGCTGAGACGG,-,0.00) 200(CAGTTTTG,-,0.00),314(CGGTTTCG,-,0.00) 561_WT_peak_1792 chr12 90257211 90257559 + 127 NA Intergenic Intergenic 154653 NR_028138 338758 Hs.601766 NR_028138 ENSG00000271614 LINC00936 - long intergenic non-protein coding RNA 936 ncRNA 0.017241 0.432665 156(GGCGTTGA,-,0.00) 151(TGGGCGGC,-,0.00) 152(GGGCGGCGTT,+,0.00) 561_WT_peak_2372 chr14 102290986 102291468 + 127 NA intron (NM_001161725, intron 3 of 15) intron (NM_001161725, intron 3 of 15) 15087 NM_178587 5527 Hs.368264 NM_002719 HPRD:03385 PPP2R5C B56G|PR61G protein phosphatase 2, regulatory subunit B', gamma protein-coding 0.014523 0.494824 272(CGTCACTA,+,0.00) 7(CAGCAAGGCCTC,-,0.00) 561_WT_peak_1164 chr10 126377394 126377766 + 127 NA intron (NM_014661, intron 3 of 4) intron (NM_014661, intron 3 of 4) -15017 NR_120631 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA 0.008065 0.455764 561_WT_peak_5112 chr3 50387915 50388218 + 127 NA promoter-TSS (NM_007022) promoter-TSS (NM_007022) -60 NM_007022 11068 Hs.149443 NM_007022 HPRD:06143 CYB561D2 101F6|TSP10|XXcos-LUCA11.4 cytochrome b561 family, member D2 protein-coding 0.069307 0.631579 -92(CCGCGAGCCCGG,+,0.00) 90(TCGAGGCC,+,0.00) 561_WT_peak_780 chr1 228770571 228770936 + 127 NA Intergenic CpG -9641 NR_037962 58480 Hs.647774 NM_021205 HPRD:06965 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding 0.098630 0.677596 73(CCGCCAGCCCGG,+,0.00) 71(CACCGCCAGCCC,+,0.00) 36(GCCCGGCCCG,+,0.00) 86(GCCGCGGG,+,0.00),123(CCCGCGGC,-,0.00),134(CCCCCGGC,-,0.00) 134(CCCCCGGCTCCC,-,0.00) 80(CCCGGGGCCGCG,+,0.00) 35(AGCCCGGCCC,-,0.00) 86(GCCGCGGGGC,+,0.00) 11(GGCGCCTGGCTG,+,0.00),38(CCGGCCCGGCCG,+,0.00),73(CCGCCAGCCCGG,-,0.00) 561_WT_peak_4134 chr2 70417591 70418068 + 127 NA intron (NM_017880, intron 1 of 9) CpG 322 NM_017880 54980 Hs.720049 NM_017880 HPRD:07927 C2orf42 - chromosome 2 open reading frame 42 protein-coding 0.073375 0.635983 75(CCGGCTTCCGGG,+,0.00),122(CCTGCTTCCCGG,+,0.00),258(CCGCCGCCCCGG,+,0.00) 39(GAGCGGCCGCCC,+,0.00) 45(CCGCCCGA,+,0.00) 125(GCTTCCCGGC,-,0.00) 561_WT_peak_7300 chr9 74979551 74980077 + 127 NA promoter-TSS (NM_001278243) promoter-TSS (NM_001278243) -306 NM_001278244 7763 Hs.406096 NM_006007 HPRD:05302 ZFAND5 ZA20D2|ZFAND5A|ZNF216 zinc finger, AN1-type domain 5 protein-coding 0.140684 0.762808 148(GGAGGAGGTGGA,-,0.00),248(CGAGGAGGGCGA,-,0.00) -154(CGGCCCGGCAAC,+,0.00) 139(GGGGGCCGAG,+,0.00),242(GGCGGACGAG,+,0.00) 178(AGCGGCTA,-,0.00) -33(CCGGGAAGGCTG,-,0.00),144(CCGAGGAGGAGG,-,0.00) 81(AGCGTCGA,-,0.00),209(TCGTCGCC,+,0.00) 5(CGGGCCGGGA,-,0.00) -158(CCCCCGGC,-,0.00),-20(GCCGGGCG,+,0.00),1(GCCGCGGG,+,0.00),52(GCCGCGGG,+,0.00) -60(CGGCACGA,-,0.00),-9(TGGTGCCG,+,0.00) 341(TGCGCGGC,-,0.00) -157(CCCCGGCCCGGC,-,0.00),42(CGCCGCCGCCGC,-,0.00),45(CGCCGCCGCCGC,-,0.00) 343(CGCGGCTCCCGG,-,0.00) 41(GCGCCGCCGC,-,0.00),271(GCCGCGAGGC,+,0.00),339(GCTGCGCGGC,+,0.00) 561_WT_peak_4190 chr2 88990826 88991257 + 127 NA promoter-TSS (NM_144563) promoter-TSS (NM_144563) -135 NM_144563 22934 Hs.469264 NM_144563 HPRD:01589 RPIA RPI ribose 5-phosphate isomerase A protein-coding 0.081206 0.608796 177(CGGGGGAGCCGG,-,0.00) 98(TCGAAGCC,+,0.00),218(GGCGTCGG,-,0.00) 159(CGTAAGCG,-,0.00) -22(CCCGCGGC,-,0.00),184(GCCGGGGG,+,0.00) 180(GGGAGCCGGGGG,+,0.00),243(CCTTCAGCACCC,-,0.00) 130(CCCGCGCA,+,0.00) 41(CGTCGCGG,+,0.00) 561_WT_peak_859 chr10 5855547 5855956 + 127 NA promoter-TSS (NM_001494) promoter-TSS (NM_001494) -239 NM_001494 2665 Hs.299055 NM_001494 HPRD:02863 GDI2 HEL-S-46e|RABGDIB GDP dissociation inhibitor 2 protein-coding 0.124694 0.719512 -113(GCTTCCGGTTCC,-,0.00),164(GGGCCCGGAGCC,+,0.00) -58(CCGGGGTGGAGG,-,0.00),120(CGGGGGTGGCGG,-,0.00) -128(GGCGTCGC,-,0.00),48(TCGCCGCC,+,0.00) 10(GGGCGGGAGCTC,-,0.00),109(GGGCTGCCTCTC,-,0.00) 73(CGCGTGCG,+,0.00) 20(TCGCTCGG,-,0.00) -135(AGGGCGGGGC,-,0.00),103(CGGGCCGGGC,-,0.00) -38(GCCGCGGG,+,0.00) -126(CGTCGCCA,+,0.00) 209(TTTTCCCG,-,0.00) -113(GCTTCCGGTTCC,-,0.00) -44(CACGGAGCCGCG,+,0.00) 104(GGGCCGGGCT,+,0.00) 561_WT_peak_2061 chr13 52377638 52378539 + 127 NA intron (NM_001270424, intron 1 of 9) CpG 210 NM_001031719 79758 Hs.266728 NM_024705 HPRD:07833 DHRS12 SDR40C1 dehydrogenase/reductase (SDR family) member 12 protein-coding 0.112098 0.699557 556(GCTTCCGGTTCC,-,0.00) 160(CTCGGGCGCC,-,0.00) 40(AGACACTT,-,0.00) 471(CCGCGCTCCCGG,+,0.00),502(CCGCCCCCCGGG,+,0.00) -144(GGCGACGA,-,0.00),67(GGCGCCGA,-,0.00),608(TCGACTCC,+,0.00),690(GGGGTCGA,-,0.00) 174(TCGGTCGC,-,0.00) 297(GCCGCGGG,+,0.00) 551(CCGCGGCTTCCG,-,0.00) 229(GGTCGCTA,+,0.00) 537(CGGTTATG,-,0.00) -85(TGGAGCCAAAGG,+,0.00) 556(GCTTCCGGTTCC,-,0.00) 78(GCCGCCCA,+,0.00),373(GCCGCGCC,+,0.00),481(GGCGCGGC,-,0.00) 99(CGCCGGGGCCGC,-,0.00),363(CCCGCGCCCCGC,-,0.00),494(CCCTGGTCCCGC,-,0.00) 357(CGGGGCCCCGCG,-,0.00) 150(AGCCCCGCCC,-,0.00),610(GACTCCGCCC,-,0.00) 335(CGAGGCGG,+,0.00) 368(GCCCCGCCGC,-,0.00) 561_WT_peak_5051 chr3 32726596 32726947 + 127 NA non-coding (NR_046352, exon 1 of 17) non-coding (NR_046352, exon 1 of 17) 134 NM_015442 25904 Hs.444851 NM_015442 HPRD:16731 CNOT10 - CCR4-NOT transcription complex, subunit 10 protein-coding 0.099715 0.704545 75(GGGCCCGGAGCC,+,0.00) -87(CGGAAGTAGTGG,+,0.00) -108(GGCGCGGC,-,0.00) -143(GCGGGGCCAGTA,+,0.00) 78(CCCGGAGCCGGG,+,0.00) 175(CCGAGTCG,-,0.00) 125(CGGCCAGCCCGG,-,0.00),129(CAGCCCGGCGGC,-,0.00) 561_WT_peak_599 chr1 163291414 163291781 + 127 NA promoter-TSS (NM_031423) promoter-TSS (NM_031423) -16 NM_001254748 8490 Hs.24950 NM_003617 HPRD:04471 RGS5 MST092|MST106|MST129|MSTP032|MSTP092|MSTP106|MSTP129 regulator of G-protein signaling 5 protein-coding 0.079019 0.597826 48(CCGCCCTGCGCC,+,0.00) 21(TCGACGCC,+,0.00) 6(GTCCGAGG,-,0.00) -116(TGGTTTTG,-,0.00),-22(CGAAACCG,+,0.00) -102(AACTCGGACC,-,0.00) 16(CCGACTCG,-,0.00),122(CGTCGCGG,+,0.00),141(CTTGGCGG,+,0.00) 561_WT_peak_1283 chr11 48076853 48077123 + 127 NA intron (NM_002843, intron 1 of 24) intron (NM_002843, intron 1 of 24) 74878 NM_002843 5795 Hs.318547 NM_002843 HPRD:02955 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase, receptor type, J protein-coding 0.003704 0.498155 561_WT_peak_913 chr10 22629414 22629865 + 126 NA Intergenic CpG -4735 NM_172242 9576 Hs.655170 NM_012443 HPRD:09305 SPAG6 CT141|Repro-SA-1|pf16 sperm associated antigen 6 protein-coding 0.126386 0.747788 185(AGAGGCCT,-,0.00) 79(GGGCAGCCGCTC,-,0.00) -48(CCGACCGG,+,0.00) -7(GCCGCGGG,+,0.00),67(CCCCCGCC,-,0.00),241(CCCGCGGC,-,0.00) -11(TAGCGCCG,-,0.00) -42(GGCGCGGC,-,0.00),212(GCCGCGCC,+,0.00) -14(CGCTAGCGCCGC,-,0.00),-4(GCGGGGCCTGGG,+,0.00),26(CGCCGGCTCCGG,-,0.00),207(CGCCCGCCGCGC,-,0.00) -99(GGCCAGGGCGCT,-,0.00) -7(GCCGCGGGGC,+,0.00) -100(CGGCCAGGGCGC,-,0.00),-2(GGGGCCTGGGTT,+,0.00) 561_WT_peak_3046 chr17 14205151 14205515 + 126 NA exon (NM_006041, exon 1 of 2) exon (NM_006041, exon 1 of 2) 827 NM_006041 9953 Hs.48384 NM_006041 HS3ST3B1 30ST3B1|3OST3B1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 protein-coding 0.085165 0.646575 19(GGCGCCGA,-,0.00) 6(CGTGCGCG,-,0.00) 188(AGGGCAGGGA,-,0.00) -36(CGGCACGC,-,0.00) 170(CTTCGGAC,+,0.00) -158(GCTGCGAGCC,+,0.00) 561_WT_peak_7025 chr8 56986843 56987314 + 126 NA promoter-TSS (NM_001023) promoter-TSS (NM_001023) 62 NM_001146227 6224 Hs.8102 NM_001023 RPS20 S20 ribosomal protein S20 protein-coding 0.106157 0.671610 98(GCATCCGGGTCC,-,0.00),228(GGAGCCGAAGTC,+,0.00) -115(GGCGCCCGAG,+,0.00) -44(CTGACCGA,+,0.00) -120(CCCCCGGC,-,0.00) 40(CCGCGTCTTCCT,-,0.00) 262(GCGCCGAGAGGG,-,0.00) -133(CGAAACCG,+,0.00) 227(AGGAGCCGAAGT,+,0.00) 561_WT_peak_4023 chr2 36473466 36473814 + 126 NA Intergenic Intergenic 109073 NR_037631 100288911 Hs.432924 NR_037631 LOC100288911 - uncharacterized LOC100288911 ncRNA 0.002874 0.338109 -48(AACCACTT,-,0.00),124(AGCCACCT,-,0.00) 561_WT_peak_6218 chr6 27782328 27782527 + 126 NA promoter-TSS (NM_003521) promoter-TSS (NM_003521) 91 NM_021066 8331 Hs.406691 NM_021066 HIST1H2AJ H2A/E|H2AFE|dJ160A22.4 histone cluster 1, H2aj protein-coding 0.095477 0.655000 -43(GCCCGGCCCG,+,0.00) -40(CGGCCCGA,-,0.00) -44(AGCCCGGCCC,-,0.00) -36(CCGAGAAG,-,0.00) -18(GGCCTTGGCGCG,-,0.00) 561_WT_peak_1890 chr12 121567000 121567219 + 126 NA Intergenic Intergenic -3513 NR_033953 5027 Hs.729169 NM_002562 HPRD:03977 P2RX7 P2X7 purinergic receptor P2X, ligand-gated ion channel, 7 protein-coding 0.013699 0.481818 561_WT_peak_7093 chr8 102149377 102149843 + 126 NA Intergenic Intergenic 68350 NM_001267708 51123 Hs.374485 NM_016096 HPRD:13688 ZNF706 PNAS-106|PNAS-113 zinc finger protein 706 protein-coding 0.030043 0.552463 -34(AGGTGGCT,+,0.00),159(AGAGGCCT,-,0.00),170(AGGTGTCT,+,0.00) 56(CGGCACGG,-,0.00) 294(CGTCGGCC,+,0.00) 149(CAAAACAG,+,0.00) 150(AAAACAGGAAGA,+,0.00) 561_WT_peak_1915 chr12 124196669 124196901 + 126 NA promoter-TSS (NM_012463) promoter-TSS (NM_012463) -80 NM_012463 23545 Hs.25786 NM_012463 HPRD:16521 ATP6V0A2 A2|ARCL|ARCL2A|ATP6A2|ATP6N1D|J6B7|RTF|STV1|TJ6|TJ6M|TJ6S|VPH1|WSS ATPase, H+ transporting, lysosomal V0 subunit a2 protein-coding 0.150862 0.742489 38(GGAACCGGAACC,+,0.00) -125(CCGGGGAGCCGC,-,0.00),15(CGGGGGGGGCGG,-,0.00) -5(GGCGTCCA,-,0.00) -83(GAGCGCCAGCTG,+,0.00) -64(CGTACCCG,-,0.00) 3(TTGGTCGG,-,0.00),7(TCGGCCGG,-,0.00) 13(GGCGGGGG,+,0.00) -24(TCGTGCGG,+,0.00) -91(GTCCGGCG,-,0.00) -124(CGGGGAGCCGCG,+,0.00) -32(CCGCCACG,-,0.00) 561_WT_peak_644 chr1 182360474 182360905 + 126 NA promoter-TSS (NM_001033056) promoter-TSS (NM_001033056) -150 NM_001033056 2752 Hs.518525 NM_002065 HPRD:00701 GLUL GLNS|GS|PIG43|PIG59 glutamate-ammonia ligase protein-coding 0.106729 0.708333 -150(GGCGCAGGCCGG,-,0.00) 151(GACACCGGGCCG,-,0.00) 183(CCGAGCAGGCGG,-,0.00) -36(CAGCGCCAGCCC,+,0.00) 62(AGGGCTGGGA,-,0.00) 21(TCATGCCG,+,0.00) 196(CGGGTAAA,+,0.00) 102(TGGGCGGC,-,0.00) -123(GGGCGGCGCT,+,0.00) 202(AAGCTAGGCCGC,-,0.00) 561_WT_peak_1187 chr11 2421619 2422049 + 126 NA promoter-TSS (NM_001297659) promoter-TSS (NM_001297659) 116 NM_005706 10078 Hs.523424 NM_005706 HPRD:10357 TSSC4 - tumor suppressing subtransferable candidate 4 protein-coding 0.093023 0.663573 -9(GTTTCCGGGGCT,-,0.00),3(GCTTCCGAGCCG,-,0.00) 95(GGCGGCCCAG,+,0.00),149(CTCGGCCGGC,-,0.00) 29(GGCGTGGA,-,0.00),83(GGCGTCGG,-,0.00),205(GGCGCCGA,-,0.00) 91(GAGCGGCGGCCC,+,0.00) 150(TCGGCCGG,-,0.00),209(CCGACCAA,+,0.00) 21(AGGGCCGGGG,-,0.00) 179(GGGCTGAGCGCG,-,0.00) -37(CGGTCTTG,-,0.00) -117(CCAGCCTGGCTG,+,0.00) 561_WT_peak_471 chr1 148000730 148000970 + 126 NA intron (NR_102404, intron 17 of 18).2 tRNA-Asn-AAC|tRNA|tRNA 6704 NR_104086 101954277 NR_104086 RNVU1-19 RNU1-126|RNU1-147|RNVU1-13|vU1.13|vU1.19 RNA, variant U1 small nuclear 19 snRNA 0.058333 0.485477 63(AGCCACTA,-,0.00) -66(CGCGTTCG,+,0.00) 561_WT_peak_2669 chr16 3208874 3209123 + 126 NA Intergenic CpG 23864 NM_001134655 7760 Hs.115284 NM_004220 HPRD:12224 ZNF213 CR53|ZKSCAN21|ZSCAN53 zinc finger protein 213 protein-coding 0.088353 0.576000 22(CTCGGCCGCA,-,0.00) 68(GGGCCGATCC,+,0.00) 561_WT_peak_3952 chr2 7865669 7866000 + 126 NA Intergenic Intergenic 173952 NR_110256 101929551 Hs.116006 NR_110256 LOC101929551 - uncharacterized LOC101929551 ncRNA 0.003021 0.421687 39(CAAAACCA,+,0.00) 561_WT_peak_4613 chr20 34203648 34204168 + 126 NA promoter-TSS (NM_003116) promoter-TSS (NM_003116) 99 NM_003116 6676 Hs.123159 NM_003116 HPRD:04330 SPAG4 CT127|SUN4 sperm associated antigen 4 protein-coding 0.101923 0.706334 138(TCGGCCTCGTCC,+,0.00) 236(GCCCGGGCCT,+,0.00) -17(GCCGCGGG,+,0.00),23(CCCGCGGC,-,0.00) 247(GGGAGCCCGAGG,+,0.00) -99(GCGCGGCCAGGG,+,0.00),-14(GCGGGGCCTGCC,+,0.00),231(GCGGAGCCCGGG,+,0.00),269(CCGGGGCCCGAG,+,0.00) -146(GCTGCCATGGCT,+,0.00),-95(GGCCAGGGCAGC,-,0.00),56(GGCCTTGGCGAC,-,0.00) -17(GCCGCGGGGC,+,0.00),116(GCGGCGAAGC,+,0.00) 561_WT_peak_1676 chr12 48499978 48500244 + 126 NA promoter-TSS (NM_001267594) promoter-TSS (NM_001267594) -20 NM_001267594 29843 Hs.371957 NM_014554 HPRD:07153 SENP1 SuPr-2 SUMO1/sentrin specific peptidase 1 protein-coding 0.075188 0.558052 -62(CGTACTCG,-,0.00) 21(CGCCCGGC,-,0.00) -1(CTTACCCG,-,0.00) -12(CCCTCTGCTCCC,-,0.00) -156(TGCGCGGT,-,0.00) -138(CCGAGAAG,-,0.00) 561_WT_peak_5666 chr5 1801486 1801722 + 126 NA exon (NM_004553, exon 1 of 4) exon (NM_004553, exon 1 of 4) 108 NM_004553 4726 Hs.408257 NM_004553 NDUFS6 CI-13kA|CI-13kD-A|CI13KDA NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase) protein-coding 0.118644 0.704641 -15(CCGGGGAGAAGG,-,0.00) -113(GGCGGCGA,-,0.00) -19(CCGACCGG,+,0.00) -142(CGGGTCAA,+,0.00) -65(GCGGAGCCTGCC,+,0.00) -74(CGAGGCGG,+,0.00) 561_WT_peak_3580 chr19 3505736 3506109 + 126 NA promoter-TSS (NM_016263) promoter-TSS (NM_016263) -373 NM_016263 51343 Hs.413133 NM_016263 FZR1 CDC20C|CDH1|FZR|FZR2|HCDH|HCDH1 fizzy/cell division cycle 20 related 1 (Drosophila) protein-coding 0.077748 0.601604 7(GGCTTCGA,-,0.00) 169(GCTTCCTGTATT,-,0.00) 158(CGTGGAGCCGCG,+,0.00) 561_WT_peak_5658 chr4 191043838 191044285 + 125 NA Intergenic (TTAGGG)n|Simple_repeat|Simple_repeat 58404 NR_121644 100419743 NR_121644 DBET DBE-T D4Z4 binding element transcript (non-protein coding) ncRNA 0.018265 0.535308 561_WT_peak_4473 chr2 219433347 219434001 + 125 NA promoter-TSS (NM_020935) promoter-TSS (NM_020935) 371 NM_001271634 9125 Hs.148767 NM_005444 HPRD:08828 RQCD1 CNOT9|CT129|RCD-1|RCD1 RCD1 required for cell differentiation1 homolog (S. pombe) protein-coding 0.079511 0.621374 -159(GGAGGAGGGTCA,-,0.00) -78(CCTTCCGGTCCT,-,0.00),50(CGAGCCGGAGTC,+,0.00) 65(TGGCGGCT,+,0.00) -87(CGCGGACG,+,0.00),124(CGGACGCG,-,0.00),128(CGCGTCCG,+,0.00) 330(CGGCACGC,-,0.00) 177(TGGCGACG,-,0.00) 14(GGGGTGAGAGGT,-,0.00) 121(GGTCGGAC,+,0.00),122(GTCGGACG,-,0.00),433(GTCCCACG,-,0.00) 100(GGGTGCTGAAGG,+,0.00) 44(GCGGAGCGAGCC,+,0.00) -29(AACTAGGCCC,-,0.00) 33(CCGCGAAG,-,0.00) -24(GGCCCTGGAGGC,-,0.00) 561_WT_peak_4327 chr2 149925940 149926152 + 125 NA intron (NM_177964, intron 1 of 6) intron (NM_177964, intron 1 of 6) 31065 NM_177964 130576 Hs.357567 NM_177964 HPRD:14045 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding 0.000000 0.422535 561_WT_peak_2164 chr14 32030571 32030927 + 125 NA exon (NM_025152, exon 1 of 11) exon (NM_025152, exon 1 of 11) 158 NR_120408 80224 Hs.288981 NM_025152 HPRD:16600 NUBPL C14orf127|IND1|huInd1 nucleotide binding protein-like protein-coding 0.070225 0.655462 -6(CCGAGCGA,+,0.00) -34(GCGGGGCCACTG,+,0.00) 176(CGTGGCGG,+,0.00) 561_WT_peak_845 chr10 3799913 3800314 + 125 NA Intergenic Intergenic 27360 NM_001300 1316 Hs.4055 NM_001300 HPRD:03632 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel-like factor 6 protein-coding 0.024938 0.537313 29(TAGCGTCT,+,0.00) -76(CAGCCTCCCCGC,+,0.00) 561_WT_peak_4421 chr2 198299300 198300170 + 125 NA promoter-TSS (NM_012433) promoter-TSS (NM_012433) 36 NM_001005526 23451 Hs.632554 NM_012433 HPRD:09281 SF3B1 Hsh155|MDS|PRP10|PRPF10|SAP155|SF3b155 splicing factor 3b, subunit 1, 155kDa protein-coding 0.075862 0.583238 645(TGAGCCGTAATC,+,0.00) -45(AAGCCGCT,+,0.00),-44(AGCCGCTT,-,0.00) 310(TCGTCGCC,+,0.00),313(TCGCCGCC,+,0.00) 355(CGCGTGCG,+,0.00) 379(TCCGTCGG,-,0.00) 655(TCGTGTCG,+,0.00) 191(TAGCAACG,-,0.00) -35(AACGAGGCCC,-,0.00) 319(CCGCCACG,-,0.00) 318(GCCGCCACGGAG,+,0.00) 561_WT_peak_5715 chr5 42951159 42951529 + 125 NA Intergenic CpG 42091 NR_104643 643977 Hs.535791 NR_104643 FLJ32255 - uncharacterized LOC643977 ncRNA 0.108108 0.698113 -93(CGCCCCGGCAGC,+,0.00) -137(GGAGGCCGAG,+,0.00) 96(GCGACCGA,+,0.00) 126(TGGTGCCG,+,0.00) -36(CGCCGCCGCCGC,-,0.00) 87(AGCGGTGCCGCG,+,0.00) 193(GCCAATGGCGCC,-,0.00) -116(GCGGCGGCGC,+,0.00),-37(GCGCCGCCGC,-,0.00) 561_WT_peak_5437 chr4 26585281 26585713 + 125 NA promoter-TSS (NM_001292054) promoter-TSS (NM_001292054) -49 NM_001292054 55296 Hs.479403 NM_018317 HPRD:07730 TBC1D19 - TBC1 domain family, member 19 protein-coding 0.050926 0.517321 561_WT_peak_391 chr1 114354653 114354954 + 125 NA exon (NM_018364, exon 1 of 7) exon (NM_018364, exon 1 of 7) 267 NM_018364 54665 Hs.486285 NM_018364 HPRD:08561 RSBN1 ROSBIN round spermatid basic protein 1 protein-coding 0.112957 0.695364 -93(CTCGGCCGCC,-,0.00) -141(TGGCGGCT,+,0.00) -133(GCGACGCC,+,0.00) 115(CGTCCGCG,-,0.00) 102(CCGACCGC,+,0.00) -82(CCGCTTCTCCTG,-,0.00) 63(TGCGCAGC,-,0.00),117(TCCGCGCA,+,0.00) -90(GGCCGCCCCCGC,-,0.00) -136(GCTGCGACGC,+,0.00) 561_WT_peak_1558 chr12 4758271 4758494 + 125 NA promoter-TSS (NM_001278309) promoter-TSS (NM_001278309) 118 NM_005002 4704 Hs.75227 NM_005002 NDUFA9 CC6|CI-39k|CI39k|NDUFS2L|SDR22E1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa protein-coding 0.067265 0.580357 -141(TGGCGGCT,+,0.00) -83(CCGGGAACGGCG,-,0.00) -39(AGGTTTTG,-,0.00) -55(CCGAGACG,-,0.00) 561_WT_peak_5490 chr4 56814819 56815454 + 125 NA 5' UTR (NM_025009, exon 1 of 26) 5' UTR (NM_025009, exon 1 of 26) 162 NM_025009 9662 Hs.518767 NM_014645 HPRD:09954 CEP135 CEP4|KIAA0635|MCPH8 centrosomal protein 135kDa protein-coding 0.118110 0.720126 71(GTTACCGGGGCA,-,0.00) 47(AGCCGCTA,-,0.00),203(ATGCGGCT,+,0.00) 335(CCGGGAGGCCGC,-,0.00) -54(GGCGCCGA,-,0.00),21(TCGTCGCC,+,0.00),187(TCGAGGCC,+,0.00) 228(CGGCTGGAGCTG,-,0.00) 315(CGGGCCGGGC,-,0.00) -60(GCCGCGGG,+,0.00),350(GCCGCGGG,+,0.00) 22(CGTCGCCA,+,0.00),143(TAGCGCCG,-,0.00) 386(GGGCGGGGAGGG,-,0.00) 58(GTCCGCCG,-,0.00) 257(GGGAGCCAGAGG,+,0.00) 302(TGGGCGGT,-,0.00) 344(CGCGCGGCCGCG,+,0.00) -162(GGGCGGCGTT,+,0.00),316(GGGCCGGGCT,+,0.00) 99(CGTGTCGG,+,0.00) -37(GGCGCCGTGGCC,+,0.00) 366(AGGCCAGGCCGG,-,0.00) 561_WT_peak_7273 chr9 66493856 66494188 + 125 NA promoter-TSS (NR_024496) promoter-TSS (NR_024496) -247 NR_024496 442421 Hs.585349 NR_024496 PTGER4P2-CDK2AP2P2 PTGER4P2 PTGER4P2-CDK2AP2P2 readthrough transcribed pseudogene pseudo 0.069277 0.681682 122(TCGAGGCC,+,0.00) -42(GCTTGGCCGC,-,0.00) 561_WT_peak_3669 chr19 16435585 16436110 + 125 NA intron (NM_016270, intron 1 of 2) CpG 196 NM_016270 10365 Hs.744182 NM_016270 HPRD:03602 KLF2 LKLF Kruppel-like factor 2 protein-coding 0.135238 0.749049 83(GGCGGCCGGG,+,0.00) -100(CCGCCCGCCCGC,+,0.00),39(CCGCGAGCGCGG,-,0.00),71(CGGGGACGGCGG,-,0.00),190(CGGGGATCGCGG,-,0.00) -45(CGTCCGCG,-,0.00) 5(TCCTGCCG,+,0.00),34(CCGTGCCG,+,0.00) 301(GTCCGGCG,-,0.00) -151(GCCGCGCC,+,0.00),97(TGGGCGGC,-,0.00) -158(CGCGCGCGCCGC,-,0.00),-131(GCGGGCCCGGCC,+,0.00),-108(AGCCGTCCCCGC,-,0.00),70(GCGGGGACGGCG,+,0.00),278(CGCTGGCCGCGC,-,0.00) -20(CCGGCCATGGCG,+,0.00),-18(GGCCATGGCGCT,-,0.00) 237(GCCCCGCCGC,-,0.00) -80(CAGCCCGGCCTC,-,0.00) 561_WT_peak_2687 chr16 8891531 8891910 + 125 NA promoter-TSS (NM_000303) promoter-TSS (NM_000303) 50 NM_000303 5373 Hs.625732 NM_000303 HPRD:03472 PMM2 CDG1|CDG1a|CDGS|PMI|PMI1|PMM 2 phosphomannomutase 2 protein-coding 0.094987 0.665789 101(CCCGCGGC,-,0.00) 2(TCGTGCCA,+,0.00) 91(CCCTCACCGCCC,+,0.00) 53(GCCTGGCCCAGC,-,0.00) -10(GGGCCGAGTT,+,0.00) 141(CGACGCGG,+,0.00) 41(GGACATGGCAGC,-,0.00) 99(GCCCCGCGGC,-,0.00) 561_WT_peak_5025 chr3 15468854 15469046 + 125 NA promoter-TSS (NM_152396) promoter-TSS (NM_152396) 92 NM_152396 131965 Hs.149487 NM_152396 HPRD:14494 METTL6 - methyltransferase like 6 protein-coding 0.062500 0.585492 11(CCCCCGCC,-,0.00) 14(CCGCCACTTCCG,-,0.00) -2(TGCCATGGCACC,-,0.00) 561_WT_peak_2765 chr16 29625136 29625368 + 125 NA promoter-TSS (NR_002593) promoter-TSS (NR_002593) -214 NR_002593 81893 Hs.677169 NM_031211 HPRD:13964 SLC7A5P1 DC49|LAT1-3TM|MLAS|hLAT1-3TM solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1 pseudo 0.107759 0.763948 1(CCGTCCTCCCGG,+,0.00) -24(CCCCCGGC,-,0.00) -164(GGCTCTCAGCCC,+,0.00) -21(CCGGCGCCCGCG,+,0.00),23(GCGGGGCCTGGC,+,0.00) -157(AGCCCCGCCC,-,0.00) 25(GGGGCCTGGCAG,+,0.00) 561_WT_peak_814 chr1 236260394 236260628 + 125 NA Intergenic LTR10A|LTR|ERV1 -32030 NM_002508 4811 Hs.356624 NM_002508 HPRD:00574 NID1 NID nidogen 1 protein-coding 0.017094 0.634043 561_WT_peak_3189 chr17 41323191 41323482 + 125 NA promoter-TSS (NR_110868) promoter-TSS (NR_110868) 349 NM_001291571 4077 Hs.277721 NM_005899 HPRD:01326 NBR1 1A1-3B|IAI3B|M17S2 neighbor of BRCA1 gene 1 protein-coding 0.051546 0.565068 -99(AGAGCCGGTAGC,+,0.00) -65(CGGCAGGCGCCC,-,0.00) -139(TTTATCCG,-,0.00) 561_WT_peak_3957 chr2 9770923 9771134 + 125 NA intron (NM_006826, intron 1 of 5) CpG-14702 156 NM_006826 10971 Hs.74405 NM_006826 HPRD:00886 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta protein-coding 0.127962 0.712264 -117(AGCGGCAT,-,0.00),-105(AACCGGCT,+,0.00) -114(GGCATCGA,-,0.00) -34(CCGACCCA,+,0.00) -76(GCCCGGCCCT,+,0.00) -77(CGCCCGGC,-,0.00) -151(CCGCACCTTCCC,-,0.00) -159(CGTTGGCCCCGC,-,0.00),-58(GCGCGGCCGGAG,+,0.00) -14(CACGTCTCCGCG,-,0.00) -1(CCGCGACG,-,0.00) -2(GCCGCGACGC,+,0.00) 561_WT_peak_1659 chr12 44200167 44200454 + 125 NA promoter-TSS (NM_001242397) promoter-TSS (NM_001242397) -132 NR_073473 5756 Hs.189075 NM_002822 HPRD:10174 TWF1 A6|PTK9 twinfilin actin-binding protein 1 protein-coding 0.094077 0.663194 59(CCGACGCC,+,0.00) -80(CCCCCGGC,-,0.00) -33(TCTTGCCG,+,0.00) -25(CCGCCTCTCCCG,-,0.00),-16(CCGCTTCTTCCG,-,0.00) -73(CCTCGCTA,+,0.00) 31(CTCCGACG,-,0.00) 96(CAAAAACG,+,0.00) 57(CGCCGACGCCGC,-,0.00) -118(GCCCCGCCGC,-,0.00) -100(GCCGCCGGGCTG,+,0.00) 561_WT_peak_66 chr1 12570718 12571161 + 125 NA 3' UTR (NM_018156, exon 69 of 69) 3' UTR (NM_018156, exon 69 of 69) 3639 NR_003022 677882 Hs.658450 NR_003022 SNORA59B ACA59 small nucleolar RNA, H/ACA box 59B snoRNA 0.013544 0.495495 561_WT_peak_587 chr1 161424255 161424615 + 125 NA Intergenic CpG -50770 NM_021642 2212 Hs.352642 NM_021642 HPRD:00906 FCGR2A CD32|CD32A|CDw32|FCG2|FCGR2|FCGR2A1|FcGR|IGFR2 Fc fragment of IgG, low affinity IIa, receptor (CD32) protein-coding 0.091667 0.692521 -4(GAACCCGGGCCG,-,0.00) 52(AGGCGGCT,+,0.00) 172(GCGACGCC,+,0.00) -116(TGGCTGGGGCGC,-,0.00) -130(GCCGCGGG,+,0.00) -105(CGGGAGAAGCGA,+,0.00) 170(CCGCGACG,-,0.00) -61(GGGGCCTGGCAG,+,0.00) 561_WT_peak_1683 chr12 49523887 49524350 + 125 NA intron (NM_006082, intron 1 of 3) CpG 1186 NM_006082 10376 Hs.524390 NM_006082 HPRD:03960 TUBA1B K-ALPHA-1 tubulin, alpha 1b protein-coding 0.056156 0.603448 259(GGCGGCCCAG,+,0.00) 105(GGGCGCGCGCTC,-,0.00) 123(CCCCCGGC,-,0.00) 141(AGGCACGA,-,0.00) -140(CTAAACCG,+,0.00) 179(GCCGCCCA,+,0.00) 70(CGGGGCTCTGCG,-,0.00) 67(GGGCGGGGCT,+,0.00) 561_WT_peak_6795 chr7 102937865 102938194 + 124 NA intron (NM_004279, intron 1 of 12) CpG 156 NM_004279 9512 Hs.184211 NM_004279 HPRD:07539 PMPCB Beta-MPP|MPP11|MPPB|MPPP52|P-52 peptidase (mitochondrial processing) beta protein-coding 0.103343 0.690909 -121(TGGCGGCT,+,0.00) 44(TCGGCGCC,+,0.00) 101(GGGCGCCAGGCG,+,0.00),112(GGCCTGGGGCTG,-,0.00) 66(TGGGTCGG,-,0.00) 98(GCCGGGCG,+,0.00),132(GCCGGGGG,+,0.00) -109(CGGCTCGA,-,0.00) -84(GGCGCGGC,-,0.00) -87(CGCGGCGCGGCG,+,0.00),-87(CGCGGCGCGGCG,-,0.00) 561_WT_peak_4971 chr22 50624065 50624265 + 124 NA promoter-TSS (NM_025204) promoter-TSS (NM_025204) -195 NM_025204 80305 Hs.517731 NM_025204 HPRD:11450 TRABD LP6054|PP2447 TraB domain containing protein-coding 0.125000 0.751244 -71(GGACCCGGGAGC,+,0.00) -67(CCGGGAGCGCCG,-,0.00),-58(CCGGGGGGGGGG,-,0.00) -59(GCCGGGGG,+,0.00),-41(GGCGGGGG,+,0.00) -5(GTCCGAAG,-,0.00) -39(CGGGGGCCCCGC,-,0.00) 561_WT_peak_3802 chr19 45972698 45973137 + 124 NA intron (NM_006732, intron 1 of 3) intron (NM_006732, intron 1 of 3) 1664 NM_006732 2354 Hs.590958 NM_006732 HPRD:01270 FOSB AP-1|G0S3|GOS3|GOSB FBJ murine osteosarcoma viral oncogene homolog B protein-coding 0.050114 0.627273 -112(TGGCGGCT,+,0.00) -94(TCGGCGCC,+,0.00) 240(GCGAGCCAGCCC,+,0.00) 233(TTGGTCGG,-,0.00) -142(CCCTCTCTGTCC,+,0.00) 164(GCGAACCGAAGG,+,0.00) 200(AGCTCCGCCC,-,0.00) -114(CTTGGCGG,+,0.00) 561_WT_peak_7078 chr8 98788589 98788802 + 124 NA intron (NM_018407, intron 1 of 6) CpG 886 NM_018407 55353 Hs.492314 NM_018407 LAPTM4B LAPTM4beta|LC27 lysosomal protein transmembrane 4 beta protein-coding 0.107981 0.621495 -29(TCGACGGC,+,0.00) -115(CGCGTAGG,+,0.00) -125(CCCGCGGC,-,0.00) 39(CGGATTTG,-,0.00) -39(GCTTTGTGTTTC,-,0.00) -135(TCCGCGCA,+,0.00) -133(CGCGCAGCCCCG,+,0.00),-131(CGCAGCCCCGCG,-,0.00),-123(CGCGGCCTCGCG,-,0.00) -127(GCCCCGCGGC,-,0.00) 561_WT_peak_5974 chr5 143569480 143569766 + 124 NA intron (NM_020768, intron 2 of 3) intron (NM_020768, intron 2 of 3) 19186 NM_020768 57528 Hs.661870 NM_020768 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding 0.020979 0.452962 -101(AGGTTTTG,-,0.00) 561_WT_peak_3212 chr17 44438626 44438865 + 124 NA intron (NM_016632, intron 1 of 4).3 CpG 389 NM_001039083 100506084 Hs.559259 NM_001039083 ENSG00000228696 ARL17B ARL17|ARL17A ADP-ribosylation factor-like 17B protein-coding 0.083682 0.650000 13(AGGCCGCT,+,0.00) -29(CCGGCTCCCGGG,+,0.00) -51(CGTGCGCG,-,0.00) -32(CGCCCGGC,-,0.00) -96(CGGCACGA,-,0.00) -21(CGGGGAAA,+,0.00) -49(TGCGCGGC,-,0.00) 7(GCTGCCAGGC,+,0.00) -42(CAGCCAGGCACG,-,0.00),8(CTGCCAGGCCGC,-,0.00) 561_WT_peak_7651 chrY 15815665 15816074 + 124 NA 5' UTR (NM_004202, exon 1 of 2) 5' UTR (NM_004202, exon 1 of 2) 422 NM_004202 9087 Hs.159201 NM_004202 HPRD:02458 TMSB4Y TB4Y thymosin beta 4, Y-linked protein-coding 0.051345 0.514634 32(AACCACTT,-,0.00),48(AAGTGGCT,+,0.00) -95(CGCCTACG,+,0.00) -33(CGTGGCTA,+,0.00) 221(GAAAGAGGAAGC,+,0.00) 561_WT_peak_7629 chrX 153626221 153626507 + 124 NA promoter-TSS (NM_006013) promoter-TSS (NM_006013) -207 NM_001256580 6134 Hs.534404 NM_006013 HPRD:02421 RPL10 AUTSX5|DXS648|DXS648E|L10|NOV|QM ribosomal protein L10 protein-coding 0.087413 0.627178 -157(CCGGCCTCCCGG,+,0.00),-156(CGGCCTCCCGGG,+,0.00) 66(TCTACGCC,+,0.00) -134(AACGCGGGCC,-,0.00) 561_WT_peak_14 chr1 1342433 1342974 + 124 NA promoter-TSS (NM_017971) promoter-TSS (NM_017971) -10 NM_017971 55052 Hs.182698 NM_017971 HPRD:14746 MRPL20 L20mt|MRP-L20 mitochondrial ribosomal protein L20 protein-coding 0.131238 0.726937 90(GCTTCCGGGTCA,-,0.00) -105(CCGGGCAGGCGG,-,0.00) 36(CGCACGCG,-,0.00),258(CGCGGACG,+,0.00),281(CGCACGCG,-,0.00) -50(GCGGTCGG,-,0.00) 366(CCCGCGGC,-,0.00) -58(CGAAAGTAGCGG,+,0.00) 248(CGTGGCTA,+,0.00) -19(TGCGCGGT,-,0.00) 359(CGGGGGCCCCGC,-,0.00) -5(GACCATGGCGCC,-,0.00) 364(GCCCCGCGGC,-,0.00) 561_WT_peak_7650 chrY 15590980 15591731 + 124 NA intron (NM_001258270, intron 1 of 27) CpG 1195 NR_047599 7404 Hs.115277 NM_007125 HPRD:02451 UTY KDM6AL|UTY1 ubiquitously transcribed tetratricopeptide repeat containing, Y-linked protein-coding 0.059920 0.543883 460(AGACGCCT,-,0.00) 421(GTCCCACG,-,0.00) -82(TGGGCGGT,-,0.00),385(ACTGCGCA,+,0.00) 561_WT_peak_479 chr1 148760197 148760976 + 124 NA intron (NR_104217, intron 2 of 17) CpG -45429 NM_001144032 730262 NM_001144032 PPIAL4E COAS2 peptidylprolyl isomerase A (cyclophilin A)-like 4E protein-coding 0.068036 0.608974 -91(TAGTGGCT,+,0.00),339(AGCCGCCT,-,0.00),448(AGTCGCTT,-,0.00) -123(GGGCTGGCCCTT,-,0.00) -137(CCGGTCGG,-,0.00) 520(AGGGCAGGGA,-,0.00) 147(CGCCCGGC,-,0.00) 151(CGGCAGGA,-,0.00),332(CGGCCCGA,-,0.00),403(TCGCGCCG,+,0.00) 436(CCCTCCCTGCCC,+,0.00) 216(CGTTGGAC,+,0.00) 177(GAAAACCG,+,0.00),451(CGCTTTTG,-,0.00) 275(CCCGCCCTGCCC,+,0.00) 464(GCTGCGGAGC,+,0.00) 561_WT_peak_6299 chr6 34203504 34204315 + 124 NA promoter-TSS (NM_002131) promoter-TSS (NM_002131) -668 NM_145903 3159 Hs.518805 NM_002131 HPRD:02829 HMGA1 HMG-R|HMGA1A|HMGIY high mobility group AT-hook 1 protein-coding 0.067818 0.616995 17(TCCGCCTGCGCC,+,0.00) -147(CCGGGGAGGAAG,-,0.00),42(CCGCCCTCCCCG,+,0.00) 78(TCGCTCGG,-,0.00) 105(GCCGGGCG,+,0.00),112(GCCGGGCG,+,0.00) -141(AGGAAGAAGGGG,+,0.00) 63(CCTTTGGCTTCC,-,0.00) 43(CGCCCTCCCCGC,-,0.00),574(CCCTGGGCCCGC,-,0.00) 11(CGCCGCTCCGCC,-,0.00) -51(CCGCCTCG,-,0.00),-20(CCGAGAAG,-,0.00),127(CGTGGCGG,+,0.00) 561_WT_peak_184 chr1 37980182 37980662 + 124 NA promoter-TSS (NM_022756) promoter-TSS (NM_022756) -2 NM_022756 64769 Hs.17118 NM_022756 MEAF6 C1orf149|CENP-28|EAF6|NY-SAR-91 MYST/Esa1-associated factor 6 protein-coding 0.120833 0.715177 173(ATGCGGCT,+,0.00) -137(GGGCGGGCGCGG,-,0.00) 24(CGGCGCGA,-,0.00),114(CCGTGCCG,+,0.00) 124(CTTCGCTA,+,0.00) 5(GGGCTGAGGCGG,-,0.00) -140(GCGGGGCGGGCG,+,0.00),-28(CGGCGGCGCCGC,-,0.00),17(GCGGCGGCGGCG,+,0.00),49(GCGCCGCCAGGG,+,0.00) -130(CGCGGAGCCCCA,+,0.00) 153(CTTCTCGG,+,0.00) 51(GCCGCCAGGGGG,+,0.00) -29(GCGGCGGCGC,+,0.00),20(GCGGCGGCGC,+,0.00) -163(GCGGCCGGGCTT,+,0.00) 561_WT_peak_2615 chr15 93352503 93353054 + 124 NA Intergenic CpG 14064 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo 0.099819 0.635870 29(GGAGCCGGGCGA,-,0.00),123(GCGCCCTCCGCC,+,0.00) -72(CGGCCCGGAGGG,+,0.00) -32(CCGGGGGCGGGG,-,0.00) 20(CGCGTTCG,+,0.00),118(CGGACGCG,-,0.00) -33(GCCGGGGG,+,0.00),32(GCCGGGCG,+,0.00),171(CCCGCGGC,-,0.00) -126(TCCTGCCG,+,0.00),280(TCGTGGCG,+,0.00) 56(TTTACCCA,-,0.00) 107(ACCGCGCC,+,0.00) -26(GCGGGGTCAGCC,+,0.00) -93(CGCGGAGCCGTG,+,0.00),26(CGAGGAGCCGGG,+,0.00) -28(GGGCGGGGTC,+,0.00),16(GGGCCGCGTT,+,0.00) -1(GCTGCGAGCC,+,0.00) 561_WT_peak_5440 chr4 36287842 36288279 + 124 NA intron (NM_001170700, intron 1 of 8) intron (NM_001170700, intron 1 of 8) 2416 NM_001170700 401124 Hs.363407 NM_001136536 DTHD1 - death domain containing 1 protein-coding 0.009153 0.410959 83(CAAAACCT,+,0.00) 561_WT_peak_4423 chr2 198364605 198364904 + 124 NA promoter-TSS (NM_002157) promoter-TSS (NM_002157) 33 NM_001202485 100529241 Hs.633165 NM_001202485 HSPE1-MOB4 HSPE1-PHOCN HSPE1-MOB4 readthrough protein-coding 0.100334 0.670000 4(GTTCCCGGGCCT,-,0.00) -71(GCGCGCGAGCCC,+,0.00) 15(TCGCTCGG,-,0.00) 6(TCCCGGGCCT,+,0.00) -143(CCCGCGGC,-,0.00) -28(CGCGCTCAGCCC,+,0.00),-19(CCCTCTCCGGCC,+,0.00) -47(CCCGCGCA,+,0.00) -150(CTCCCGCCCCGC,-,0.00),-68(CGCGAGCCCCGC,-,0.00) -141(CGCGGCACCGCG,+,0.00),-141(CGCGGCACCGCG,-,0.00) -64(AGCCCCGCCC,-,0.00) -145(GCCCCGCGGC,-,0.00) 561_WT_peak_7569 chrX 69353812 69353976 + 124 NA exon (NM_001551, exon 2 of 7) exon (NM_001551, exon 2 of 7) 576 NM_001551 3476 Hs.496267 NM_001551 HPRD:02140 IGBP1 ALPHA-4|IBP1 immunoglobulin (CD79A) binding protein 1 protein-coding 0.079268 0.569697 -150(CGCGGCTCCCCG,-,0.00) 561_WT_peak_6182 chr6 26554207 26554544 + 124 NA Intergenic tRNA-Ile-ATT|tRNA|tRNA 15803 NM_006353 10473 Hs.236774 NM_006353 HMGN4 HMG17L3|NHC high mobility group nucleosomal binding domain 4 protein-coding 0.044510 0.452663 40(CCCGTACG,+,0.00),42(CGTACGGG,-,0.00) 561_WT_peak_5648 chr4 185655288 185655508 + 124 NA promoter-TSS (NM_024629) promoter-TSS (NM_024629) -112 NM_024629 79682 Hs.575032 NM_024629 HPRD:14722 CENPU CENP50|CENPU50|KLIP1|MLF1IP|PBIP1 centromere protein U protein-coding 0.100000 0.647059 -151(CGCGTGCG,+,0.00) -114(TCCCTGGCCT,+,0.00) 561_WT_peak_2243 chr14 61809232 61809598 + 124 NA intron (NM_006255, intron 1 of 13) intron (NM_006255, intron 1 of 13) 21254 NM_006255 5583 Hs.333907 NM_006255 HPRD:05669 PRKCH PKC-L|PKCL|PRKCL|nPKC-eta protein kinase C, eta protein-coding 0.005464 0.468665 -78(CGGGTTTG,-,0.00) -49(AACTCTGCCC,-,0.00) 561_WT_peak_7617 chrX 135055540 135055881 + 124 NA intron (NM_173470, intron 1 of 3) CpG 424 NM_173470 93380 Hs.110702 NM_173470 HPRD:06626 MMGT1 EMC5|TMEM32 membrane magnesium transporter 1 protein-coding 0.061584 0.584795 141(GAGCAGCAGCCC,+,0.00) -33(TCGGTCCG,-,0.00) 116(CAGCGACG,-,0.00) -30(GTCCGATG,-,0.00) 52(GCTGCGCA,+,0.00),54(TGCGCAGC,-,0.00) 52(GCTGCGCAGC,+,0.00),52(GCTGCGCAGC,-,0.00) 561_WT_peak_23 chr1 2322772 2323002 + 124 NA promoter-TSS (NM_007033) promoter-TSS (NM_007033) 303 NR_125361 79906 Hs.642701 NM_024848 HPRD:07843 MORN1 - MORN repeat containing 1 protein-coding 0.126087 0.714286 19(CTCGCCCGCC,-,0.00) -70(AGCGACCT,-,0.00) -120(GGGGTCGA,-,0.00),-111(GGCGTAGA,-,0.00) 36(TCTTGCCG,+,0.00) 57(TAGCGACC,-,0.00) -9(GACGCGGCCC,-,0.00) -26(CCGCCTAG,-,0.00),-22(CTAGGCGG,+,0.00),-10(CGACGCGG,+,0.00) 561_WT_peak_7410 chr9 123342118 123342822 + 124 NA promoter-TSS (NR_073556) promoter-TSS (NR_073556) -22 NR_073557 55755 Hs.269560 NM_018249 HPRD:09740 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding 0.071023 0.587234 -122(CGGCCCGGTTAC,+,0.00) 196(CCGACCGG,+,0.00) 218(CGGGCAGGGA,-,0.00) 37(TAGCGACC,-,0.00) 394(TTTACGCG,-,0.00) -159(AGGCCGCGTT,+,0.00),372(AAAGCGGGCC,-,0.00) 163(CGAGGCGG,+,0.00) 9(GCGGCGGCGC,+,0.00) 561_WT_peak_1401 chr11 70049123 70049628 + 124 NA 5' UTR (NM_003824, exon 1 of 2) 5' UTR (NM_003824, exon 1 of 2) 106 NM_003824 8772 Hs.86131 NM_003824 HPRD:03909 FADD MORT1 Fas (TNFRSF6)-associated via death domain protein-coding 0.110891 0.695652 44(AAACGGCT,+,0.00) 17(CGTCCGCG,-,0.00) -160(CCCCGGCCCT,+,0.00),240(AGGGCCGGGC,-,0.00) -10(GCCGGGCG,+,0.00) 56(CTTCGCTA,+,0.00),62(TAGGGACG,-,0.00) 9(GCCGCGCC,+,0.00),72(TGCGCGGG,-,0.00) -160(CCCCGGCCCTGC,-,0.00),25(GCGCCGCCAGCC,+,0.00),182(GCTGGGCAAGCG,+,0.00),205(CCAGGGCCAGCG,+,0.00) 21(CGCGGCGCCGCC,+,0.00),21(CGCGGCGCCGCC,-,0.00) 273(CCCGCCATGGAC,+,0.00) 32(CAGCCAGGGCGG,-,0.00),241(GGGCCGGGCCGC,-,0.00) 561_WT_peak_2040 chr13 48807350 48807654 + 124 NA exon (NM_021999, exon 1 of 6) exon (NM_021999, exon 1 of 6) 228 NM_021999 9445 Hs.643683 NM_021999 HPRD:04878 ITM2B ABRI|BRI|BRI2|BRICD2B|E25B|E3-16|FBD|imBRI2 integral membrane protein 2B protein-coding 0.128289 0.740984 -163(CTCTGCCGCC,-,0.00) 74(CCGACGCC,+,0.00) -25(GCCGCGCC,+,0.00) -30(CCCAGGCCGCGC,-,0.00) -126(CCCGGAGCCGCT,+,0.00) 81(CGTCGCGG,+,0.00) -23(CGCGCCATGGTG,+,0.00) -156(GCCGCGGAGC,+,0.00) 561_WT_peak_4408 chr2 192542661 192542919 + 123 NA promoter-TSS (NM_001254736) promoter-TSS (NM_001254736) -8 NM_001254736 64859 Hs.591610 NM_022837 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding 0.116279 0.729730 -96(GGCGGCCGGG,+,0.00) -129(CCGGGGAGGAGC,-,0.00) -86(TCCCGCCCCT,+,0.00),-6(AGGGGCGGGC,-,0.00) -37(GCGTGCCG,+,0.00),10(TCCTGCCG,+,0.00) -151(GCGGAGCCCGCG,+,0.00),-2(GCGGGCCGAGGG,+,0.00) -153(GGGCGGAGCC,+,0.00) 561_WT_peak_2320 chr14 90422593 90422858 + 123 NA intron (NM_001008744, intron 1 of 15) MIR|SINE|MIR 479 NM_018319 55775 Hs.209945 NM_018319 HPRD:06226 TDP1 - tyrosyl-DNA phosphodiesterase 1 protein-coding 0.060377 0.545113 23(TCGTGCCT,+,0.00) 561_WT_peak_2286 chr14 74551696 74551944 + 123 NA promoter-TSS (NM_001278594) promoter-TSS (NM_001278594) 164 NM_001024674 91750 Hs.612866 NM_001024674 LIN52 C14orf46|c14_5549 lin-52 DREAM MuvB core complex component protein-coding 0.032258 0.534137 27(TTTCCCCG,-,0.00) 561_WT_peak_317 chr1 91487243 91488133 + 123 NA promoter-TSS (NM_016620) promoter-TSS (NM_016620) 124 NM_201269 84146 Hs.173001 NM_016620 HPRD:15885 ZNF644 BM-005|MYP21|NatF|ZEP-2 zinc finger protein 644 protein-coding 0.078652 0.635241 -80(TCCGCCTCCTCG,+,0.00) 18(AGAGCCGGAGGC,+,0.00),83(AGGCCCGAAACC,+,0.00) -133(CGCGGCCGCC,-,0.00),-72(CTCGGCCGCC,-,0.00) -79(CCGCCTCCTCGG,+,0.00) 318(GCCGCGGG,+,0.00) 144(TGGTGCCG,+,0.00) 298(CCGCCTCTGCCG,-,0.00) 17(GAGAGCCGGAGG,+,0.00),237(CCCTCCGCTCCC,-,0.00) -111(CCGGGGCCCGGG,+,0.00) 217(CTACTCGG,+,0.00) 561_WT_peak_2721 chr16 21513090 21513542 + 123 NA non-coding (NR_027155, exon 1 of 29) non-coding (NR_027155, exon 1 of 29) 286 NR_027155 100271836 Hs.552700 NR_027155 ENSG00000180747 SMG1P3 - SMG1 pseudogene 3 pseudo 0.132743 0.728477 70(GGAGGAGGAGGA,-,0.00),73(GGAGGAGGAGGA,-,0.00),148(CGAGGAGGCGGG,-,0.00),245(GGAGGAGGACGA,-,0.00) 63(CCGAGAAGGAGG,-,0.00),241(CCGAGGAGGAGG,-,0.00) 95(GGCGGGGG,+,0.00) -122(TGGTGCCG,+,0.00),-113(TGGTGCCG,+,0.00),-37(CGACACGA,-,0.00) 48(GGGCTGAGAAGG,-,0.00) -15(GCCGCCCA,+,0.00),163(GGCGCGGT,-,0.00),216(TGCGCGGC,-,0.00) -107(CGCCGCCGCCGC,-,0.00),-104(CGCCGCCGCCGC,-,0.00),-101(CGCCGCCGCCGC,-,0.00),-98(CGCCGCCGCCGC,-,0.00),-95(CGCCGCCGCCGC,-,0.00),-92(CGCCGCCGCCGC,-,0.00),-89(CGCCGCCGCCGC,-,0.00) -64(CGGGGCTCTGCG,-,0.00) -38(CCGACACG,-,0.00),63(CCGAGAAG,-,0.00) -20(GCGCCGCCGC,-,0.00) 561_WT_peak_7180 chr8 144631383 144631852 + 123 NA Intergenic MLT1A0|LTR|ERVL-MaLR -3940 NM_001166237 79792 Hs.118983 NM_024736 HPRD:11014 GSDMD DF5L|DFNA5L|GSDMDC1 gasdermin D protein-coding 0.019190 0.506383 115(AGCCACTT,-,0.00) -94(CCGACTGA,+,0.00) 279(CTTGGCGG,+,0.00) 561_WT_peak_5726 chr5 43066025 43067074 + 123 NA promoter-TSS (NR_102752) promoter-TSS (NR_102752) 524 NR_034127 100132356 Hs.726831 NM_175919 LOC100132356 - uncharacterized LOC100132356 ncRNA 0.082936 0.591429 317(GGAGGCCGAG,+,0.00) -68(CCCGGGAGGCGG,-,0.00) 430(GGCGTCGC,-,0.00) 370(CGTCCGCG,-,0.00) 698(GCGACCGA,+,0.00) 299(GCCGGGGG,+,0.00),415(CCCCCGCC,-,0.00) 280(TAGAGACG,-,0.00) 259(CGAAACCG,+,0.00),651(CGGTGTTG,-,0.00) -140(ATTACCCG,-,0.00) -65(GGGAGGCGGAGG,+,0.00) 372(TCCGCGCA,+,0.00) 291(GCGGCGCCGCCG,+,0.00) 412(GCTCCCCCGC,-,0.00) 561_WT_peak_993 chr10 52383865 52384198 + 123 NA promoter-TSS (NM_147156) promoter-TSS (NM_147156) -294 NM_147156 259230 Hs.654698 NM_147156 HPRD:18203 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding 0.045045 0.550898 -9(AGGGCCGGAGAC,+,0.00) 6(AGCCGCTA,-,0.00) 60(AGGCACGA,-,0.00) 561_WT_peak_5857 chr5 96143392 96143835 + 123 NA 5' UTR (NM_016442, exon 1 of 20) 5' UTR (NM_016442, exon 1 of 20) 279 NM_001040458 51752 Hs.666524 NM_016442 HPRD:06015 ERAP1 A-LAP|ALAP|APPILS|ARTS-1|ARTS1|ERAAP|ERAAP1|PILS-AP|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding 0.106095 0.736486 -154(TCGCCTTCCTCC,+,0.00),-133(TCTCCCTCCTCC,+,0.00),-112(TCTCCCTCCTCC,+,0.00) 110(AGGCTGGCGCTG,-,0.00) 208(CCGAGCGA,+,0.00) -36(TCCCGGCCCG,+,0.00) -16(CCCGCGGC,-,0.00) -12(CGGCTCGA,-,0.00),132(CGGCCCGA,-,0.00) -62(GGGAAGGGGCGG,+,0.00) 189(AGGGTAAA,+,0.00) 101(GGGAGCGGCAGG,+,0.00) 117(CGCTGAGCGGCG,+,0.00) 35(GCGCCGCCGC,-,0.00),153(GCGGGGAAGC,+,0.00) 561_WT_peak_4357 chr2 170440921 170441488 + 123 NA intron (NM_004792, intron 1 of 13) CpG 354 NM_004792 9360 Hs.470544 NM_004792 HPRD:12083 PPIG CARS-Cyp|CYP|SCAF10|SRCyp peptidylprolyl isomerase G (cyclophilin G) protein-coding 0.065256 0.612676 171(CAGCCCCCGCCC,+,0.00) -33(TGCGTACG,+,0.00) 174(CCCCCGCC,-,0.00) 9(GGCGCGGC,-,0.00) 1(GCGGAGCCGGCG,+,0.00),142(CCGGGGCCTGGG,+,0.00) -1(GGGCGGAGCC,+,0.00) 167(CTGCCAGCCCCC,-,0.00) 561_WT_peak_3798 chr19 45953615 45954051 + 123 NA Intergenic AluSx|SINE|Alu -17420 NM_001114171 2354 Hs.590958 NM_006732 HPRD:01270 FOSB AP-1|G0S3|GOS3|GOSB FBJ murine osteosarcoma viral oncogene homolog B protein-coding 0.059633 0.546911 -91(GCCGGCCGAG,+,0.00) -90(CCGGCCGA,+,0.00) -32(GCCGGGCG,+,0.00) 77(CGTCTCTA,+,0.00) -28(GGCGCGGT,-,0.00) -101(CCGCCACG,-,0.00),14(CTAGGCGG,+,0.00) 561_WT_peak_1526 chr11 128194502 128195043 + 123 NA Intergenic Intergenic 197433 NM_005238 2113 Hs.369438 NM_005238 HPRD:01260 ETS1 ETS-1|EWSR2|p54 v-ets avian erythroblastosis virus E26 oncogene homolog 1 protein-coding 0.024030 0.536900 274(CCGGGCAGGAGG,-,0.00) 47(TCGTGCCT,+,0.00) -75(CCTTCAGCTCAC,-,0.00) 561_WT_peak_932 chr10 30637888 30638168 + 123 NA intron (NM_018109, intron 1 of 8) CpG 239 NM_018109 55149 Hs.173946 NM_018109 HPRD:15097 MTPAP PAPD1|SPAX4 mitochondrial poly(A) polymerase protein-coding 0.050000 0.604982 -93(AGCCGTTT,-,0.00),78(AGGCCGCT,+,0.00) -71(TTTCCCCG,-,0.00) 561_WT_peak_1104 chr10 96305390 96305731 + 123 NA promoter-TSS (NM_018063) promoter-TSS (NM_018063) 36 NM_001289068 3070 Hs.655830 NM_018063 HPRD:07232 HELLS LSH|PASG|SMARCA6 helicase, lymphoid-specific protein-coding 0.082111 0.622807 39(TGGGCCGGCAGC,+,0.00) -63(GCGGGAGGGCGG,-,0.00),99(CCCGGTTCCCGG,+,0.00) 16(GGCGGGGG,+,0.00) -99(GAAAACCG,+,0.00),50(CGGTTGTG,-,0.00) -137(CAGGTAAA,+,0.00),-18(TTTTCCCG,-,0.00) -68(GCGGGGCGGGAG,+,0.00) -13(CCGCGAAG,-,0.00) -71(GCAGCGGGGC,+,0.00) 561_WT_peak_5805 chr5 72143850 72144401 + 123 NA intron (NM_153188, intron 1 of 24) CpG 195 NM_153188 3842 Hs.482497 NM_002270 HPRD:04210 TNPO1 IPO2|KPNB2|MIP|MIP1|TRN transportin 1 protein-coding 0.079855 0.648551 -41(CTCGGCGGCC,-,0.00),-38(GGCGGCCGCG,+,0.00),-7(GGCGGCCGGG,+,0.00),374(GGCGGCCGGG,+,0.00) 129(AAGCCTCT,+,0.00) 369(CCCCCGGC,-,0.00),378(GCCGGGGG,+,0.00) 171(TCTTCCTGTGTC,-,0.00) 338(CCCGCGCA,+,0.00) 345(AGCTCGCCCCGC,-,0.00) -35(GGCCGCGGCGGC,-,0.00) -6(GCGGCCGGGCTG,+,0.00),323(GAGGCCTGGCCG,+,0.00) 561_WT_peak_2437 chr15 40986973 40987254 + 123 NA promoter-TSS (NM_001164270) promoter-TSS (NM_001164270) 190 NR_040058 100505648 Hs.586876 NR_040058 ENSG00000245849 RAD51-AS1 - RAD51 antisense RNA 1 (head to head) ncRNA 0.078292 0.592199 0(CTCGGCCTCC,-,0.00) 42(CCCCCGGC,-,0.00) -143(CTGGTAAA,+,0.00) 561_WT_peak_2588 chr15 85923318 85923752 + 123 NA promoter-TSS (NM_006738) promoter-TSS (NM_006738) -312 NM_007200 11214 Hs.459211 NM_006738 HPRD:05253 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A kinase (PRKA) anchor protein 13 protein-coding 0.041475 0.544828 -160(TAGCGCCG,-,0.00) 50(GGGCGGAGAGGA,-,0.00) 561_WT_peak_1894 chr12 121837924 121838464 + 123 NA intron (NM_001256858, intron 1 of 4) CpG 273 NM_194271 80196 Hs.292804 NM_025126 HPRD:10509 RNF34 CARP-1|CARP1|RFI|RIF|RIFF|hRFI ring finger protein 34, E3 ubiquitin protein ligase protein-coding 0.085185 0.691312 -99(GCCGGCCGAG,+,0.00) 248(AGCCGCCA,-,0.00) 12(CCGCCTTAGCGG,+,0.00) 183(CGTTCGCG,-,0.00) -98(CCGGCCGA,+,0.00),86(CCAACCGA,+,0.00) 168(GCCGGGCG,+,0.00) 186(TCGCGCCG,+,0.00) 160(GGGGAGAAGCCG,+,0.00) 174(CGTCCCTA,+,0.00) 50(GCGCTGAGGGGG,-,0.00),201(CCCTCTCTGCGC,+,0.00) 341(CGTGGGAC,+,0.00) -163(ACCGCCCA,+,0.00) 64(CGCTTGCCCGGC,-,0.00) 249(GCCGCCAGGGCT,+,0.00) 561_WT_peak_623 chr1 172807556 172807873 + 123 NA Intergenic Intergenic 179529 NM_000639 356 Hs.2007 NM_000639 HPRD:00610 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6 Fas ligand (TNF superfamily, member 6) protein-coding 0.006309 0.380503 561_WT_peak_5825 chr5 77071634 77072081 + 123 NA intron (NM_001297738, intron 1 of 2) CpG 328 NM_001297740 6902 Hs.291212 NM_004607 HPRD:18166 TBCA - tubulin folding cofactor A protein-coding 0.120805 0.729911 -33(GAAACCGGGCCA,-,0.00) -153(CCGCTTCCCCGG,+,0.00) -41(GGCGCCGA,-,0.00) 151(GGGCCTGCGCTC,-,0.00) -87(GCCCGGCCCG,+,0.00),21(AGGGACGGGA,-,0.00) -77(CCCTCGCAGGCC,+,0.00),13(GAGCGGAGAGGG,-,0.00) 244(CGGTCTTG,-,0.00) -73(CGCAGGCCGCGG,-,0.00) 100(TGCGGAGCCCCG,+,0.00) -143(GGGCCAAGTT,+,0.00) 134(CCGCCTCG,-,0.00) 178(GCCGCCATGAGG,+,0.00) 98(ACTGCGGAGC,+,0.00) 561_WT_peak_4919 chr22 39715783 39716159 + 123 NA promoter-TSS (NM_000967) promoter-TSS (NM_000967) -301 NM_000967 6122 Hs.119598 NM_000967 HPRD:16042 RPL3 ASC-1|L3|TARBP-B ribosomal protein L3 protein-coding 0.058511 0.522546 -6(CGTCGCTT,+,0.00),34(TAGCGAAG,-,0.00) 76(TGGTTTTG,-,0.00) 561_WT_peak_601 chr1 166845032 166845612 + 123 NA intron (NM_053053, intron 1 of 7) CpG 332 NM_053053 117143 Hs.435967 NM_053053 HPRD:18114 TADA1 ADA1|HFI1|STAF42|TADA1L|hADA1 transcriptional adaptor 1 protein-coding 0.103448 0.703959 121(GTCTCCGGGGCG,-,0.00) 239(CTTGGCCGCC,-,0.00) 293(CCGACCGC,+,0.00) 305(CGCCCGGC,-,0.00) -68(GCGCTTCTCCCG,-,0.00) 195(TCTTACTGTTTC,-,0.00) 38(GGCCCGCCCCGC,-,0.00) 111(CGACGCGG,+,0.00) 71(GCCCCGCCGC,-,0.00) 130(GCGGGCTGGCAG,+,0.00) 561_WT_peak_7612 chrX 130946936 130947350 + 123 NA intron (NR_026975, intron 2 of 12) intron (NR_026975, intron 2 of 12) 17528 NR_026975 286467 Hs.720385 NR_026975 ENSG00000213468 FIRRE LINC01200 firre intergenic repeating RNA element ncRNA 0.014493 0.440964 152(CAAAAGCG,+,0.00) 561_WT_peak_7135 chr8 125273927 125274442 + 123 NA Intergenic Intergenic -14545 NR_125420 101927588 Hs.617072 NR_125420 ENSG00000214803 LOC101927588 - uncharacterized LOC101927588 ncRNA 0.009709 0.467054 140(CAAAACAG,+,0.00) 29(GCAACAGGAAGA,+,0.00),58(GCTTCCTTTTTT,-,0.00) 225(GCTGTGAAGC,+,0.00) 561_WT_peak_2564 chr15 78246296 78246467 + 123 NA Intergenic MER5A|DNA|hAT-Charlie -27193 NR_027024 645752 Hs.546408 NR_027024 LOC645752 - golgin A6 family, member A pseudogene pseudo 0.005848 0.476744 -3(GGGTTTTG,-,0.00) 561_WT_peak_6437 chr6 111580370 111580884 + 122 NA 5' UTR (NM_153369, exon 1 of 4) 5' UTR (NM_153369, exon 1 of 4) 145 NM_153369 91749 Hs.400572 NM_153369 KIAA1919 MFSD4B|NaGLT1 KIAA1919 protein-coding 0.093385 0.675728 241(CCCCCGGC,-,0.00) -58(AGGCACGA,-,0.00),42(GCGTGCCG,+,0.00) 296(CGGAGCCGGAGG,+,0.00) -14(CCCGCGCA,+,0.00) -25(CCGCCACG,-,0.00),138(CTTCTCGG,+,0.00) 161(GCTGAGAAGC,+,0.00),247(GCTGCGGGGC,+,0.00) 561_WT_peak_4640 chr20 42380099 42380449 + 122 NA Intergenic Intergenic -24632 NM_176791 149699 Hs.447626 NM_176791 HPRD:12778 GTSF1L C20orf65|FAM112A|dJ1028D15.4 gametocyte specific factor 1-like protein-coding 0.014286 0.492877 129(ATGTGGCT,+,0.00) 561_WT_peak_4182 chr2 87303456 87303897 + 122 NA promoter-TSS (NR_026846) promoter-TSS (NR_026846) -140 NR_026846 285074 Hs.424184 NM_001012626 HPRD:17345 LOC285074 - anaphase promoting complex subunit 1 pseudogene pseudo 0.113379 0.674208 -66(GGGGGAGGGGGA,-,0.00) 223(GAAACCGGCCCT,-,0.00) 169(CAGCCCCAGCGC,+,0.00) -114(CCGACCGA,+,0.00) -88(CGGCACCA,-,0.00) -146(GGCGCGGC,-,0.00) 224(AAACCGGCCC,-,0.00) 561_WT_peak_2316 chr14 88459102 88459929 + 122 NA promoter-TSS (NM_001201401) promoter-TSS (NM_001201401) 100 NM_001201401 2581 Hs.513439 NM_000153 HPRD:06057 GALC - galactosylceramidase protein-coding 0.097944 0.653382 257(GACTCCGGCGCC,-,0.00) 312(AGGCCGCT,+,0.00) 72(GCCGTCGA,-,0.00),102(GTCGTCGA,-,0.00),286(TCGCCGCC,+,0.00) -127(CCGCCCCAGCCC,+,0.00) 111(CACGTACG,+,0.00),113(CGTACGCG,-,0.00) 200(TCGCTCGG,-,0.00) 82(TCCCGGCCCA,+,0.00) -30(GCCGCGGG,+,0.00),123(GCCGGGCG,+,0.00),178(CCCGCGGC,-,0.00) 8(TCTTGCCG,+,0.00),290(CGCCACGA,-,0.00) 74(CGTCGAAC,+,0.00),95(CGTCGGAG,+,0.00) 351(CGGGTCAA,+,0.00) 61(ACCGCGCC,+,0.00),162(GGCGCGGC,-,0.00) -13(GGCTGGCCCCAC,-,0.00),41(CGCTCACCCCGC,-,0.00),56(CGCTGACCGCGC,-,0.00),328(CGCCGCCGCCGC,-,0.00) 162(GGCGCGGCCC,-,0.00) 289(CCGCCACG,-,0.00) -119(GCCCCGCAGC,-,0.00) 561_WT_peak_657 chr1 185286687 185287262 + 122 NA promoter-TSS (NM_006469) promoter-TSS (NM_006469) -513 NM_006469 10625 Hs.497183 NM_006469 HPRD:10004 IVNS1ABP FLARA3|HSPC068|KLHL39|ND1|NS-1|NS1-BP|NS1BP influenza virus NS1A binding protein protein-coding 0.040000 0.543403 -142(TCGCCGCC,+,0.00),100(GGCGTGGA,-,0.00) 310(TCGTGTCG,+,0.00) -22(CGTCAGAC,+,0.00) 285(CTGTTTTG,-,0.00) 311(CGTGTCGG,+,0.00) 561_WT_peak_6840 chr7 129251134 129251680 + 122 NA promoter-TSS (NM_001293163) promoter-TSS (NM_001293163) -136 NM_001293163 4899 Hs.654363 NM_005011 HPRD:02930 NRF1 ALPHA-PAL nuclear respiratory factor 1 protein-coding 0.115385 0.698355 234(TCCCCCTCCTCG,+,0.00) 47(GGTTCCGGCCCC,-,0.00),193(GAAGCCGGGCCG,-,0.00) 179(GGCGGCCGGG,+,0.00) -105(AACCACTT,-,0.00) -137(CCGGGAAGGCAG,-,0.00),189(CGGGGAAGCCGG,-,0.00) 15(CGTCCGCG,-,0.00),210(CGCGTGCG,+,0.00) 225(TCCCTCCCCT,+,0.00) 183(GCCGGGCG,+,0.00) 1(CCGCTTCTCCGG,-,0.00),259(CGGCAGAAGCGG,+,0.00) 154(GCCGCGCC,+,0.00),315(GGCGCGGT,-,0.00) -7(CGCTTGCGCCGC,-,0.00),246(GCGGCGGCGGCG,+,0.00),249(GCGGCGGCGGCG,+,0.00) 88(CGACGCGG,+,0.00) 170(CATCATGGCGGC,-,0.00) 188(GCGGGGAAGC,+,0.00) 180(GCGGCCGGGCGG,+,0.00) 561_WT_peak_2153 chr14 24898860 24899327 + 122 NA promoter-TSS (NM_015299) promoter-TSS (NM_015299) -48 NM_015299 23351 Hs.713590 NM_015299 HPRD:11076 KHNYN KIAA0323 KH and NYN domain containing protein-coding 0.094218 0.696581 68(GGAGGAGGGCGC,-,0.00) 289(GGCGGCGGAG,+,0.00) 183(CCGGGAAGGCCC,-,0.00) -140(TTGGTCGG,-,0.00) -48(AGGGCCGGGA,-,0.00) 85(CGGGAGGAGCTG,+,0.00) 262(GCGCTGAGAGGA,-,0.00) 239(CGGGCAAA,+,0.00) -74(ACTGCGCA,+,0.00),50(GGCGCGGC,-,0.00) 77(CGCGCAGCCGGG,+,0.00) 101(GACTCCGCCC,-,0.00) -84(CCGAGAAG,-,0.00) 251(GGGCCTGGCGGG,-,0.00) 250(GGGGCCTGGCGG,+,0.00) 561_WT_peak_1694 chr12 51157472 51157800 + 122 NA promoter-TSS (NM_005171) promoter-TSS (NM_005171) -153 NM_005171 466 Hs.648565 NM_005171 HPRD:00440 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding 0.106707 0.659574 -142(AGGGCCGGCGTC,+,0.00) -136(GGCGTCGG,-,0.00) 80(CGCGTACA,+,0.00) -134(CGTCGGTC,+,0.00) 139(GCGGAGGCAGCG,+,0.00) 561_WT_peak_2887 chr16 70285598 70286042 + 122 NA promoter-TSS (NM_058219) promoter-TSS (NM_058219) 13 NM_058219 118460 Hs.660633 NM_058219 HPRD:12107 EXOSC6 EAP4|MTR3|Mtr3p|hMtr3p|p11 exosome component 6 protein-coding 0.105856 0.694382 172(AGGCCCGGAGGG,+,0.00) -81(CGCGTACA,+,0.00),-79(CGTACACG,-,0.00),-21(CGCGTACA,+,0.00) -45(GCCGGGCG,+,0.00) 92(CTGGTTCTTCCG,-,0.00) -28(CGTCGGCC,+,0.00) 121(GCTGCGCA,+,0.00) 117(CGCGGCTGCGCA,-,0.00) -160(CCGACACG,-,0.00) 36(AGGCATGGCGGT,-,0.00) -99(GCTCAGCAGC,-,0.00) 561_WT_peak_3590 chr19 5719830 5720131 + 122 NA promoter-TSS (NM_152784) promoter-TSS (NM_152784) 196 NR_076392 9361 Hs.350265 NM_004793 HPRD:05689 LONP1 LON|LONP|LonHS|PIM1|PRSS15|hLON lon peptidase 1, mitochondrial protein-coding 0.132890 0.764901 82(ATCGGCCGCC,-,0.00) 6(GGCGTCGC,-,0.00) -51(CCCCCGCC,-,0.00),64(CCCCCGGC,-,0.00) -56(CAAAACCC,+,0.00) 104(ACCGCGCC,+,0.00) -161(CCGGCGCCCGCG,+,0.00),19(CGCTGGCCTCGG,-,0.00) -73(CGCGGCTGCTCG,-,0.00) 56(GAACCCGCCC,-,0.00) 561_WT_peak_1433 chr11 82868151 82868423 + 122 NA 5' UTR (NM_015885, exon 1 of 16) 5' UTR (NM_015885, exon 1 of 16) 150 NM_015885 51585 Hs.128959 NM_015885 PCF11 - PCF11 cleavage and polyadenylation factor subunit protein-coding 0.091912 0.637363 28(CCCCCCTCCGCG,+,0.00) -100(AGCCGCCA,-,0.00),-51(TGGCGGCT,+,0.00) 56(GCCGGAGCCGCG,+,0.00) 561_WT_peak_4130 chr2 70352080 70352465 + 122 NA non-coding (NR_024444, exon 1 of 2) non-coding (NR_024444, exon 1 of 2) 176 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LOC100133985 - uncharacterized LOC100133985 ncRNA 0.077922 0.593264 -100(GGAAGAGGGCGG,-,0.00) 109(GGGCTGGAGCCG,-,0.00) 203(TGCGTACG,+,0.00) 13(CGTGGGAC,+,0.00) 175(CGCTGCCGCCGC,-,0.00) 561_WT_peak_3718 chr19 33864648 33864926 + 122 NA promoter-TSS (NM_001252296) promoter-TSS (NM_001252296) 212 NM_001806 1054 Hs.429666 NM_001806 HPRD:00738 CEBPG GPE1BP|IG/EBP-1 CCAAT/enhancer binding protein (C/EBP), gamma protein-coding 0.140288 0.781362 26(GGAGGAGGCCGC,-,0.00) 39(GCGACGCC,+,0.00) 2(CGGCGGGCGCCC,-,0.00),85(CAGCCCCGGCCC,+,0.00) -86(TGGGTCGG,-,0.00) -77(TCGGGCCG,+,0.00) -123(CGTCGCTC,+,0.00) -99(GGGCTGTGAGGC,-,0.00) -135(CGGTTTCG,-,0.00) 75(CGGGGAAA,+,0.00) -140(GCTGCCGGTTTC,-,0.00) 63(GCGGGCCCGGCT,+,0.00) -64(CGCGGGGCCGCT,+,0.00) -158(GCTGCGGAAC,+,0.00),36(GCGGCGACGC,+,0.00) 561_WT_peak_4009 chr2 28615692 28615938 + 122 NA promoter-TSS (NM_005253) promoter-TSS (NM_005253) 36 NM_005253 2355 Hs.220971 NM_005253 FOSL2 FRA2 FOS-like antigen 2 protein-coding 0.121951 0.692308 -98(CCGAGCGA,+,0.00) -11(GCCGGGCG,+,0.00) -141(TCGTGCCA,+,0.00) -17(GGCGCGGC,-,0.00) 59(AGCGGGGCCGCG,+,0.00) 63(GGGCCGCGTC,+,0.00) -5(CGAGGCGG,+,0.00) 561_WT_peak_53 chr1 10093006 10093214 + 122 NA promoter-TSS (NM_001105562) promoter-TSS (NM_001105562) 69 NM_006048 10277 Hs.593974 NM_006048 HPRD:11659 UBE4B E4|HDNB1|UBOX3|UFD2|UFD2A ubiquitination factor E4B protein-coding 0.057692 0.631579 -31(TCCCCCTCCCCC,+,0.00) -6(GGCGTGGA,-,0.00) 561_WT_peak_3057 chr17 17597559 17597900 + 122 NA intron (NM_030665, intron 1 of 5) intron (NM_030665, intron 1 of 5) 12942 NM_030665 10743 Hs.655395 NM_030665 HPRD:07406 RAI1 SMCR|SMS retinoic acid induced 1 protein-coding 0.055718 0.660819 62(GGCCTCGA,-,0.00),168(GGCGGCGA,-,0.00) 45(AGGGCTGGGA,-,0.00),57(GCCCGGGCCT,+,0.00) 46(GGGCTGGGAGGG,-,0.00) -101(CGTCGCGG,+,0.00) 561_WT_peak_2874 chr16 67880602 67880905 + 122 NA promoter-TSS (NM_005796) promoter-TSS (NM_005796) -66 NM_005796 10204 Hs.356630 NM_005796 NUTF2 NTF2|PP15 nuclear transport factor 2 protein-coding 0.095710 0.700658 -160(AGAGGCTT,-,0.00) -115(CCTCCCTCCCTG,+,0.00) -19(TCATGCCG,+,0.00),106(TCGTGCCA,+,0.00) -63(TCCGCGCA,+,0.00) 27(GCGGGGCGGGCG,+,0.00) 24(GCAGCGGGGC,+,0.00) 561_WT_peak_6254 chr6 29910316 29910560 + 122 NA intron (NM_002116, intron 1 of 7) CpG 191 NM_002116 3105 Hs.181244 NM_002116 HPRD:00826 HLA-A HLAA major histocompatibility complex, class I, A protein-coding 0.081967 0.722449 -19(GGCGGGGG,+,0.00) 11(CGGGACGA,-,0.00) 4(GCCGCGCC,+,0.00) -2(GGGGGAGCCGCG,+,0.00) -146(GCCGTCATGGCG,+,0.00),-144(CGTCATGGCGCC,-,0.00),-107(GGGGCCCTGGCC,+,0.00) 561_WT_peak_4292 chr2 128643861 128644185 + 122 NA promoter-TSS (NM_001199140) promoter-TSS (NM_001199140) -509 NM_001199140 83607 Hs.546449 NM_031445 HPRD:14625 AMMECR1L - AMMECR1-like protein-coding 0.108025 0.680000 -19(CTGGGCCGCC,-,0.00) 81(TCGGCCGG,-,0.00) -54(CGCCCGGC,-,0.00) -155(CGTGGGAC,+,0.00) -43(CAAAACTG,+,0.00) -151(GGACCGAGTT,+,0.00) -64(CCGAGTAG,-,0.00),49(CCGCGACG,-,0.00),68(CCGCGTCG,-,0.00) 92(GCTGCCAGGC,+,0.00) 561_WT_peak_228 chr1 46806294 46806636 + 122 NA promoter-TSS (NM_001256127) promoter-TSS (NM_001256127) -385 NM_001256128 387338 Hs.163424 NM_199044 NSUN4 SHTAP NOP2/Sun domain family, member 4 protein-coding 0.090643 0.620991 -28(CCACCTCCCCGG,+,0.00) -41(CGGGTGGCGCTC,-,0.00) 9(CCGGTCGG,-,0.00) 93(TCGCGACG,-,0.00) -121(GGGCGGAGTC,+,0.00) 561_WT_peak_698 chr1 205600310 205600587 + 122 NA intron (NM_021795, intron 1 of 2) intron (NM_021795, intron 1 of 2) 1552 NM_001973 2005 Hs.497520 NM_001973 HPRD:02592 ELK4 SAP1 ELK4, ETS-domain protein (SRF accessory protein 1) protein-coding 0.072202 0.579137 16(TCCACGCC,+,0.00),31(TCGCCGCC,+,0.00),72(GGCGACGA,-,0.00),99(GGCGTCCA,-,0.00) -132(CGCGGACG,+,0.00) 561_WT_peak_5889 chr5 122847814 122848148 + 122 NA 5' UTR (NM_001270573, exon 1 of 12) 5' UTR (NM_001270573, exon 1 of 12) 188 NM_001270573 1456 Hs.129206 NM_004384 HPRD:05034 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1, gamma 3 protein-coding 0.110778 0.641791 -98(ACTTCCGGGTCC,-,0.00) -134(AGACGCTT,-,0.00) -86(GGCGTCGA,-,0.00),20(GGCGGCGA,-,0.00) 17(TCGGGCGG,-,0.00) -145(CGCCGCTA,+,0.00) -90(GTCCGGCG,-,0.00) 561_WT_peak_4858 chr22 24830418 24831105 + 122 NA intron (NR_103546, intron 19 of 19) MIR3|SINE|MIR 2674 NM_001278497 135 Hs.197029 NM_000675 HPRD:00043 ADORA2A A2aR|ADORA2|RDC8 adenosine A2a receptor protein-coding 0.014556 0.574128 261(GTTTCCGGGCCA,-,0.00) -70(AGAGGCCT,-,0.00),391(AGGTGGCT,+,0.00) 102(TAAAGAGGAAGC,+,0.00) 561_WT_peak_3508 chr18 51884032 51884525 + 122 NA promoter-TSS (NR_110234) promoter-TSS (NR_110234) -9 NM_001288980 162681 Hs.208701 NM_173529 HPRD:11334 C18orf54 LAS2 chromosome 18 open reading frame 54 protein-coding 0.079108 0.617409 -97(AGCGACTT,-,0.00) 111(GGTGTCGA,-,0.00) 38(CGCCCGGC,-,0.00) 134(CGGAGGAAGCTG,+,0.00) 253(CGGTTTTT,-,0.00) -152(CCCGCGCA,+,0.00),54(GCCGCGCA,+,0.00) 561_WT_peak_5261 chr3 132378975 132379416 + 122 NA promoter-TSS (NM_032169) promoter-TSS (NM_032169) 55 NM_024818 79876 Hs.170737 NM_024818 HPRD:15598 UBA5 THIFP1|UBE1DC1 ubiquitin-like modifier activating enzyme 5 protein-coding 0.086168 0.656109 33(CGCACCGGAAGC,+,0.00) 41(AAGCGGCT,+,0.00) 196(GGCGGCGA,-,0.00) 204(AGGCCCGGGC,-,0.00) 210(GGGCTGGGAGCG,-,0.00) -156(CGTCAGAC,+,0.00) -36(TTTAGCCG,-,0.00) -15(GGAAGCCGAAAG,+,0.00) -32(GCCGGCCCAGCG,+,0.00),163(CGCGGGCCCAGC,-,0.00),164(GCGGGCCCAGCC,+,0.00) 42(AGCGGCTCCGAG,-,0.00) 187(GGCGAAGGCGGC,-,0.00),237(CCAGCCATGGCG,+,0.00),239(AGCCATGGCGGA,-,0.00) 197(GCGGCGAAGG,+,0.00) 561_WT_peak_2331 chr14 91694877 91695357 + 122 NA Intergenic Intergenic 15735 NM_001177676 8111 Hs.8882 NM_003485 HPRD:03241 GPR68 GPR12A|OGR1 G protein-coupled receptor 68 protein-coding 0.016667 0.555094 14(AGCCACAT,-,0.00),52(AGCCACCT,-,0.00) -100(GGGCTGGGGCTC,-,0.00) 136(TAGCGAGG,-,0.00) 271(TGGTTTTG,-,0.00) 62(GCTCTGCAGC,-,0.00) 561_WT_peak_5402 chr4 4543503 4544063 + 122 NA promoter-TSS (NM_016930) promoter-TSS (NM_016930) -8 NM_016930 53407 Hs.584913 NM_016930 HPRD:06923 STX18 Ufe1 syntaxin 18 protein-coding 0.110714 0.688057 161(CCGGCCTGCGCC,+,0.00) -9(TGGCCCGGAATA,+,0.00) 385(TGGCGGCT,+,0.00) -70(TCGACCCC,+,0.00) -108(GCCGGGGG,+,0.00),129(CCCCCGGC,-,0.00) -85(TCGTCCCG,+,0.00),82(CGGCGCGA,-,0.00) 24(TAGCGACC,-,0.00),237(TCGCGACG,-,0.00) 34(CACCCTCAGCCC,+,0.00) -21(CGGTCTTG,-,0.00) -62(GCCGCCCA,+,0.00),291(TGCGCGGA,-,0.00) -138(CGCGGGCCCGGC,-,0.00),-137(GCGGGCCCGGCT,+,0.00),-12(CGCTGGCCCGGA,-,0.00) -141(CTTCGCGG,+,0.00) -136(CGGGCCCGGCTG,+,0.00) 561_WT_peak_2877 chr16 68344631 68345062 + 122 NA promoter-TSS (NM_032178) promoter-TSS (NM_032178) 22 NM_032178 84138 Hs.729520 NM_032178 SLC7A6OS - solute carrier family 7, member 6 opposite strand protein-coding 0.097448 0.655093 34(TAGTGGCT,+,0.00) 125(TCGACGCT,+,0.00) 198(CCCGCGGC,-,0.00) -4(CCGCTTCACCCG,-,0.00) -65(CGTCGCTC,+,0.00) -97(CTCCGACG,-,0.00) 0(TTCACCCG,-,0.00) -25(CGCCGGCTCCGC,-,0.00) 236(GGGTCGCTTT,+,0.00) -68(CCGCGTCG,-,0.00) 17(GGTCCTGGCGGC,-,0.00) 108(GCCCCCCAGC,-,0.00),224(GCTGGGAAGG,+,0.00) 561_WT_peak_63 chr1 12040310 12040783 + 122 NA intron (NM_001127660, intron 1 of 17) CpG 308 NM_014874 9927 Hs.376681 NM_014874 HPRD:08495 MFN2 CMT2A|CMT2A2|CPRP1|HSG|MARF mitofusin 2 protein-coding 0.103594 0.729958 210(GCCGCCGGGCCC,-,0.00) 85(CCGGGGTGGCGG,-,0.00) 208(TCGCCGCC,+,0.00) 6(GGGGTGGCGCTC,-,0.00) 268(TCGGTGGG,-,0.00) 103(GCCCGGCCCG,+,0.00),108(GCCCGGCCCG,+,0.00),223(CCCCGGCCCT,+,0.00) 297(CCCCCGCC,-,0.00) 142(GGCCGACG,-,0.00) -101(GCGGGGCGAGCC,+,0.00) -137(CGCCGAGTCGCG,+,0.00) -135(CCGAGTCG,-,0.00) 45(GCCGCGAGGC,+,0.00),205(GCCTCGCCGC,-,0.00) 561_WT_peak_7504 chrX 13142103 13142288 + 122 NA Intergenic Intergenic -79278 NM_174901 171484 Hs.667546 NM_174901 HPRD:06507 FAM9C TEX39C family with sequence similarity 9, member C protein-coding 0.010811 0.370968 -91(CAAAACTG,+,0.00) 561_WT_peak_9 chr1 1167119 1167399 + 122 NA promoter-TSS (NM_080605) promoter-TSS (NM_080605) 188 NM_016547 51150 Hs.42806 NM_016176 HPRD:13113 SDF4 Cab45|SDF-4 stromal cell derived factor 4 protein-coding 0.142857 0.758007 -36(CGGCCGTCCCGG,+,0.00) -50(CCCGCGGC,-,0.00),85(GGCGGGGG,+,0.00) -87(AGACCCGCCC,-,0.00) -116(GCCCAAGGCGGG,-,0.00) -52(GCCCCGCGGC,-,0.00) 561_WT_peak_1835 chr12 105065455 105065718 + 122 NA intron (NM_018413, intron 2 of 2) intron (NM_018413, intron 2 of 2) 80175 NR_037487 100500843 NR_037487 MIR3922 - microRNA 3922 ncRNA 0.011407 0.473485 -29(AGAGGCTT,-,0.00) -121(TTTACCCA,-,0.00) 46(AAATCGGCCA,-,0.00) 561_WT_peak_6021 chr5 172198964 172199685 + 122 NA Intergenic CpG-21390 -1121 NM_004417 1843 Hs.171695 NM_004417 HPRD:02835 DUSP1 CL100|HVH1|MKP-1|MKP1|PTPN10 dual specificity phosphatase 1 protein-coding 0.072122 0.619114 8(TCGACGGC,+,0.00) 28(CCGCCCGA,+,0.00) 274(CCCCCGCC,-,0.00) 344(CAGCGACG,-,0.00),467(CGTCGCTG,+,0.00) 274(CCCCCGCCCCGC,-,0.00) 32(CCGACACG,-,0.00),185(CGTCGCGG,+,0.00) 343(GCAGCGACGC,+,0.00) 561_WT_peak_6086 chr6 4021673 4021999 + 122 NA intron (NM_003913, intron 1 of 14) CpG 267 NM_003913 8899 Hs.159014 NM_003913 HPRD:09087 PRPF4B PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1 pre-mRNA processing factor 4B protein-coding 0.104294 0.685015 66(GGCGGCCGCG,+,0.00) 114(AGCGGCCT,-,0.00),140(TGGCGGCT,+,0.00) 104(CGTAGGCG,-,0.00) -21(CGGCGCGA,-,0.00) -158(AGTCGCTA,+,0.00) 98(GGGAGGCGTAGG,+,0.00) 138(CGTGGCGG,+,0.00) 45(GGCCGTGGCTGC,-,0.00) 73(GCGGCCTGCCGC,+,0.00) 561_WT_peak_6108 chr6 14452994 14453265 + 122 NA Intergenic Intergenic -167444 NR_108096 102216342 Hs.563409 NR_108096 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA 0.007380 0.459559 58(CAAAACCC,+,0.00) 561_WT_peak_830 chr1 245027539 245027807 + 122 NA 5' UTR (NM_004501, exon 1 of 14) 5' UTR (NM_004501, exon 1 of 14) 154 NM_004501 3192 Hs.106212 NM_004501 HPRD:04185 HNRNPU HNRPU|SAF-A|U21.1|hnRNP U heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) protein-coding 0.104478 0.643123 -29(TGGCGGCT,+,0.00) 57(GGTGTCGA,-,0.00) 33(TCGTGCTG,+,0.00) -164(CGTCGCTT,+,0.00) -55(CTCGGCTCCGCT,-,0.00) -57(AACTCGGCTC,-,0.00) -5(GGCCCGGGCGGC,-,0.00) 37(GCTGCAGAGC,+,0.00) 561_WT_peak_7000 chr8 42248947 42249315 + 122 NA promoter-TSS (NM_001135694) promoter-TSS (NM_001135694) -148 NM_005662 7419 Hs.699301 NM_005662 HPRD:06750 VDAC3 HD-VDAC3|VDAC-3 voltage-dependent anion channel 3 protein-coding 0.100543 0.677507 100(CGCACGCG,-,0.00) 109(GCTGCGGAGC,+,0.00),168(GCTCCGAAGC,+,0.00) 561_WT_peak_2805 chr16 33963244 33963523 + 122 NA promoter-TSS (NR_038368) promoter-TSS (NR_038368) -880 NR_038368 649159 Hs.532675 NM_001040069 ENSG00000256642 LINC00273 NCRNA00273|TOP long intergenic non-protein coding RNA 273 ncRNA 0.043011 0.482143 -118(AAGCGTTT,+,0.00),-75(AGCCGCCT,-,0.00) 561_WT_peak_2337 chr14 92339794 92340046 + 122 NA intron (NM_006329, intron 10 of 10) L2b|LINE|L2 -6040 NM_001128596 123036 Hs.510262 NM_152332 HPRD:11375 TC2N C14orf47|C2CD1|MTAC2D1|Tac2-N tandem C2 domains, nuclear protein-coding 0.023810 0.498024 561_WT_peak_2198 chr14 50335098 50335345 + 122 NA Intergenic Intergenic -15682 NM_004713 9147 Hs.655964 NM_004713 HPRD:08494 NEMF NY-CO-1|SDCCAG1 nuclear export mediator factor protein-coding 0.064777 0.540323 -22(TTGCGACG,-,0.00) 561_WT_peak_1974 chr13 30169004 30169510 + 122 NA intron (NM_003045, intron 1 of 12) CpG 568 NM_003045 6541 Hs.14846 NM_003045 HPRD:00091 SLC7A1 ATRC1|CAT-1|ERR|HCAT1|REC1L solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding 0.128458 0.759369 205(CACTCCGGGGCC,-,0.00) -134(GGCGGCCGGG,+,0.00) -137(CCGGGCGGCCGG,-,0.00),253(CAGCGTTCCCGG,+,0.00) -35(TCGCCGCC,+,0.00) 185(GGGCACCAGCCC,+,0.00) 18(CGCCTACG,+,0.00) 218(GCCCGGCCCT,+,0.00) -153(GCCGCGGG,+,0.00),217(CGCCCGGC,-,0.00) -85(TCGTGGCG,+,0.00) 46(TAGCGGCG,-,0.00) 114(CGGTGTTG,-,0.00) -61(ACCGCGCC,+,0.00) 209(CCGGGGCCCGCC,+,0.00),310(GCGGCGCCAGGG,+,0.00) 54(CGCGGGTCCCCG,-,0.00),299(CGCGGCCCCACG,-,0.00) -84(CGTGGCGG,+,0.00) 289(GCCGCCCTGCCG,+,0.00),312(GGCGCCAGGGCC,+,0.00) -133(GCGGCCGGGCAG,+,0.00) 561_WT_peak_2279 chr14 73493932 73494123 + 122 NA promoter-TSS (NM_021260) promoter-TSS (NM_021260) -107 NM_001281734 53349 Hs.335106 NM_021260 HPRD:12017 ZFYVE1 DFCP1|PPP1R172|SR3|TAFF1|ZNFN2A1 zinc finger, FYVE domain containing 1 protein-coding 0.057592 0.552083 561_WT_peak_3376 chr17 78518546 78518866 + 121 NA promoter-TSS (NM_001163034) promoter-TSS (NM_001163034) 81 NM_001163034 57521 Hs.133044 NM_020761 HPRD:06184 RPTOR KOG1|Mip1 regulatory associated protein of MTOR, complex 1 protein-coding 0.059375 0.613707 -108(TCTGTCGG,-,0.00) 114(CAGCCAGGCCGC,-,0.00) 561_WT_peak_691 chr1 204482061 204482455 + 121 NA Intergenic MIR3|SINE|MIR -3249 NM_001278518 4194 Hs.497492 NM_002393 HPRD:04082 MDM4 HDMX|MDMX|MRP1 MDM4, p53 regulator protein-coding 0.010152 0.362025 561_WT_peak_2065 chr13 53226184 53226978 + 121 NA promoter-TSS (NM_006704) promoter-TSS (NM_006704) -250 NM_001130912 10910 Hs.281902 NM_006704 SUGT1 SGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) protein-coding 0.073048 0.594969 156(TCATCCGGGCCT,-,0.00) 190(AGCCGCTA,-,0.00) 468(CTGGGAGCGCGG,-,0.00) 422(CGTGTACG,+,0.00) -119(CTGACCGA,+,0.00),610(TCGGTTGG,-,0.00) 40(GCCGGGCG,+,0.00) 449(TGGCTGCGAGGG,-,0.00) 399(GGCGCGGT,-,0.00) 461(GCGGGGACTGGG,+,0.00),527(AGCCGGCCCCGC,-,0.00) -97(AAAGCGGCAC,-,0.00) 451(GCTGCGAGGG,+,0.00),573(GCTGCGTGGC,+,0.00) 573(GCTGCGTGGCTG,+,0.00) 561_WT_peak_4446 chr2 204103511 204103926 + 121 NA 5' UTR (NM_177538, exon 1 of 13) 5' UTR (NM_177538, exon 1 of 13) 554 NM_177538 57404 Hs.446065 NM_020674 HPRD:07100 CYP20A1 CYP-M cytochrome P450, family 20, subfamily A, polypeptide 1 protein-coding 0.106024 0.699519 -161(TGCACCGAAATC,+,0.00),-4(GTTTCCGGGTCC,-,0.00) -134(AGGCTGGCGCTA,-,0.00) 17(CCCCCGCC,-,0.00) 97(TGGGCGGC,-,0.00) -51(CTCTGGCGCCGG,-,0.00),210(CCCGGGCGCCGC,-,0.00) -81(CCCGGCTCCTCG,-,0.00) 214(GGCGCCGCCC,-,0.00) -125(CTAGGCGG,+,0.00),81(CCGAGACG,-,0.00) 561_WT_peak_3781 chr19 42748832 42749200 + 121 NA Intergenic CpG -2280 NM_019884 2931 Hs.466828 NM_019884 HPRD:06002 GSK3A - glycogen synthase kinase 3 alpha protein-coding 0.057065 0.560976 178(GGCGGCGA,-,0.00) -11(ACTTCCGCTCCC,-,0.00) 27(CGCGGCTAGGCG,-,0.00) 561_WT_peak_7053 chr8 73921144 73921460 + 121 NA exon (NM_017489, exon 1 of 10) exon (NM_017489, exon 1 of 10) 205 NM_003218 7013 Hs.442707 NM_003218 HPRD:02975 TERF1 PIN2|TRBF1|TRF|TRF1|hTRF1-AS|t-TRF1 telomeric repeat binding factor (NIMA-interacting) 1 protein-coding 0.094937 0.678233 -22(GGAGGAGGAGGA,-,0.00),-19(GGAGGAGGAGGA,-,0.00),-16(GGAGGAGGAGGA,-,0.00),-13(GGAGGAGGAGGA,-,0.00),-10(GGAGGAGGAGGA,-,0.00) 11(GGTGGCCGAG,+,0.00) -26(CCGAGGAGGAGG,-,0.00) 145(CGCGTCCG,+,0.00) 108(CGCAGGACCCGC,-,0.00) 83(CCGCGACG,-,0.00) 26(GGCCGTGGCTGC,-,0.00) 561_WT_peak_3700 chr19 21203518 21203803 + 121 NA intron (NM_001172671, intron 1 of 4) intron (NM_001172671, intron 1 of 4) 234 NM_001172671 80264 Hs.729202 NM_025189 HPRD:15788 ZNF430 - zinc finger protein 430 protein-coding 0.042105 0.639860 -14(AAGTGGCT,+,0.00),85(TGGCGGCT,+,0.00) 5(CAGGCCTCCCGG,+,0.00) -59(GTCCGACA,-,0.00) 100(CAGGCGGGCCCC,-,0.00) 561_WT_peak_5378 chr3 197677010 197677272 + 121 NA promoter-TSS (NM_001134435) promoter-TSS (NM_001134435) 89 NM_000996 6165 Hs.529631 NM_000996 HPRD:01596 RPL35A DBA5|L35A ribosomal protein L35a protein-coding 0.053435 0.558935 -162(GGAGTCGA,-,0.00) -129(GCGGCGGGGC,+,0.00) 561_WT_peak_4916 chr22 39101965 39102206 + 121 NA exon (NM_004286, exon 1 of 12) exon (NM_004286, exon 1 of 12) 278 NM_004286 9567 Hs.276925 NM_004286 HPRD:03765 GTPBP1 GP-1|GP1|HSPC018 GTP binding protein 1 protein-coding 0.153527 0.772727 -28(CGAGGACGGCGA,-,0.00) 41(CGGCGGGCGCTG,-,0.00) -65(CCGCCCGA,+,0.00) 26(AGGCCCGGGC,-,0.00) -49(CGGCTTTG,-,0.00) 34(GCGGCGGCGGCG,+,0.00) -87(GCGGCCAGGGCC,+,0.00),-85(GGCCAGGGCCGC,-,0.00),-79(GGCCGCGGCGGC,-,0.00),-57(CTCCACGGCGGC,-,0.00),27(GGCCCGGGCGGC,-,0.00) 561_WT_peak_4512 chr2 236179688 236179899 + 121 NA Intergenic Intergenic -222940 NM_001037131 116987 Hs.435039 NM_014914 HPRD:16359 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding 0.014218 0.419811 561_WT_peak_5660 chr5 217868 218206 + 121 NA promoter-TSS (NM_001294332) promoter-TSS (NM_001294332) 260 NM_145265 133957 Hs.294145 NM_145265 CCDC127 - coiled-coil domain containing 127 protein-coding 0.056213 0.530973 24(CCGCCCACCTCC,+,0.00) 147(CCACCTCCCCGG,+,0.00) 35(CGCGGACG,+,0.00) 91(TCGGTCTG,-,0.00) 15(GGGCCGCTCC,+,0.00) 561_WT_peak_5687 chr5 35617610 35617975 + 121 NA promoter-TSS (NM_144722) promoter-TSS (NM_144722) -197 NM_144722 79925 Hs.298863 NM_024867 HPRD:11181 SPEF2 CT122|KPL2 sperm flagellar 2 protein-coding 0.049315 0.573770 80(AACGGCTT,-,0.00) -90(GAGCGCCACCCC,+,0.00),94(GCGCTGGCGCAC,-,0.00) 114(CTTACCCG,-,0.00) 27(CCGCCTCG,-,0.00) 561_WT_peak_5582 chr4 114683000 114684185 + 121 NA promoter-TSS (NM_172128) promoter-TSS (NM_172128) -509 NM_001221 817 Hs.144114 NM_001221 HPRD:09653 CAMK2D CAMKD calcium/calmodulin-dependent protein kinase II delta protein-coding 0.047257 0.568297 184(GTTCCCGGGCCA,-,0.00) 226(AACCACTT,-,0.00),449(AGCCACAT,-,0.00) 157(CCGGGCAGCAGG,-,0.00) 238(TCCACGCC,+,0.00) 725(GGCGGGGG,+,0.00) -129(TAGCGACT,-,0.00),369(CGTCGCCA,+,0.00) 409(CCCCCGCAGCCC,+,0.00) 145(CTGTTTTG,-,0.00),341(CAAAACCC,+,0.00),383(CAGAACCG,+,0.00) 116(GCCGCCCTGGGT,+,0.00) 409(CCCCCGCAGC,-,0.00) 561_WT_peak_782 chr1 228772771 228772996 + 121 NA Intergenic CpG -7511 NR_037962 58480 Hs.647774 NM_021205 HPRD:06965 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding 0.062222 0.588496 36(GGCGCCTGGCTG,+,0.00) 561_WT_peak_798 chr1 234614664 234614902 + 121 NA promoter-TSS (NM_005646) promoter-TSS (NM_005646) 66 NM_005646 6894 Hs.498115 NM_005646 HPRD:05445 TARBP1 TRM3|TRP-185|TRP185 TAR (HIV-1) RNA binding protein 1 protein-coding 0.151261 0.769874 -153(CCGGGAGCGCGC,-,0.00) 27(GAGCGCCCGCGC,+,0.00) -22(TCCCGGCTCT,+,0.00) -109(TCGAGCCG,+,0.00) -124(CGCGCCTCCTCG,-,0.00),-21(CCCGGCTCTGCG,-,0.00) 561_WT_peak_2388 chr14 105282319 105282768 + 121 NA Intergenic CpG -4995 NR_024396 196872 Hs.352220 NR_024396 ENSG00000258701 LINC00638 - long intergenic non-protein coding RNA 638 ncRNA 0.142539 0.722222 -153(CCCGGCGGGCGG,-,0.00) 21(GCGTGCCG,+,0.00) -6(TAGCGCCG,-,0.00) 55(CAAAAGCG,+,0.00) -143(GGGAGCGGATGG,+,0.00) 6(TGCGCGGG,-,0.00) -3(CGCCGGCGCTGC,-,0.00),78(GCGCTGCCAGCG,+,0.00) -94(CGTGGGGCCGCG,+,0.00) -17(GGGCCGGGCT,+,0.00) 561_WT_peak_2497 chr15 57210403 57210817 + 121 NA promoter-TSS (NM_207038) promoter-TSS (NM_207038) 87 NR_015419 145783 Hs.620525 NR_015419 ENSG00000137871 LOC145783 - uncharacterized LOC145783 ncRNA 0.108696 0.718072 -54(GGGGGCCGAG,+,0.00),206(GGCGGCGGAG,+,0.00) 37(GCGGTCGG,-,0.00),116(CCGACCGC,+,0.00) 239(CCCGCGGC,-,0.00) 168(CAGCTCCTCCCC,-,0.00) -68(CGTCGCTC,+,0.00) 235(TTAACCCG,-,0.00) 203(CTAGGCGG,+,0.00) 207(GCGGCGGAGC,+,0.00) 561_WT_peak_3537 chr18 77438928 77439484 + 121 NA promoter-TSS (NM_004715) promoter-TSS (NM_004715) -595 NM_004715 9150 Hs.465490 NM_004715 HPRD:05377 CTDP1 CCFDN|FCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding 0.106115 0.676840 318(GGAGGAGAGCGG,-,0.00) 271(GGACCCGTAGTC,+,0.00) -65(AAGTGGCT,+,0.00),-48(AGCCACTT,-,0.00) -112(CCGCCCGCCCGC,+,0.00),14(CCGCCCTCCCGC,+,0.00),86(CCGCCTGCGCGG,+,0.00) 177(CCCGCGGC,-,0.00),248(CCCGCGGC,-,0.00) 91(TGCGCGGG,-,0.00) 94(GCGGGCCGAGGG,+,0.00),209(GCGGGGCCACCA,+,0.00),241(CTCTGGGCCCGC,-,0.00) 29(GGTCCGATTT,+,0.00) 205(CGAGGCGG,+,0.00),283(CCGCGACG,-,0.00) 62(GGCGCCTTGCCC,+,0.00) 561_WT_peak_1529 chr11 129872937 129873515 + 121 NA promoter-TSS (NM_020228) promoter-TSS (NM_020228) -496 NM_020228 56980 Hs.275086 NM_020228 HPRD:11455 PRDM10 PFM7 PR domain containing 10 protein-coding 0.095156 0.644214 93(GGGCCCGGTGTC,+,0.00) 38(CTCGGGCGCC,-,0.00) -144(AGGCCTCT,+,0.00) 74(CCGCCTCCCGCG,+,0.00),140(CCGCCCGCCCCG,+,0.00) 42(GGCGCCGA,-,0.00) 135(CGCGTCCG,+,0.00) 208(CGCCCGGC,-,0.00),268(GCCGGGCG,+,0.00) 194(GAAAACCG,+,0.00) -116(CGTGTAAA,+,0.00) 41(GGGCGCCGAGGG,+,0.00) 141(CGCCCGCCCCGC,-,0.00) -10(GCGGCCCGCGTG,+,0.00),170(GTGGCCTGGCCG,+,0.00) 561_WT_peak_2173 chr14 35761507 35761874 + 121 NA exon (NM_002791, exon 1 of 7) exon (NM_002791, exon 1 of 7) 167 NM_002791 5687 Hs.446260 NM_002791 HPRD:04171 PSMA6 IOTA|PROS27|p27K proteasome (prosome, macropain) subunit, alpha type, 6 protein-coding 0.065395 0.605978 189(GGGCTGGAGCTG,-,0.00) 32(CGGTTTTG,-,0.00) 59(TTCACCCG,-,0.00) 156(GACGCGGCCC,-,0.00) 561_WT_peak_6656 chr7 44121655 44122178 + 121 NA exon (NM_013284, exon 1 of 11) exon (NM_013284, exon 1 of 11) 223 NR_104299 27434 Hs.596982 NM_013284 HPRD:16208 POLM Pol Mu|Tdt-N polymerase (DNA directed), mu protein-coding 0.103250 0.648855 83(AGGCCCGGCGGC,+,0.00) 165(AGCGGCAT,-,0.00) 313(GCGGGCGGGCGG,-,0.00) 36(GGCGTCAA,-,0.00),142(CGCGTCGA,-,0.00),154(GGCGTGGA,-,0.00),198(TCGCCGCC,+,0.00) 63(GCGCGCCAGGCC,+,0.00) 265(CCGAGCGA,+,0.00) 347(GCCCCGCCCT,+,0.00) 173(CGCCGCTA,+,0.00) -148(TGGTTTTG,-,0.00),-19(CAAAACCA,+,0.00) 9(GCCGCGCC,+,0.00),14(GCCGCGCC,+,0.00) 4(CCCTCGCCGCGC,-,0.00) 8(CGCCGCGCCGCG,+,0.00),8(CGCCGCGCCGCG,-,0.00) 169(GCATCGCCGC,-,0.00) 561_WT_peak_7041 chr8 67026392 67026625 + 121 NA Intergenic Intergenic -12770 NM_184087 84675 Hs.85524 NM_033058 HPRD:05927 TRIM55 MURF-2|RNF29|muRF2 tripartite motif containing 55 protein-coding 0.055794 0.512821 -78(TCGATGCC,+,0.00) -45(CCCGTACG,+,0.00) 2(GTCAGACG,-,0.00) -39(CGGTTTTT,-,0.00) 561_WT_peak_428 chr1 144339906 144340114 + 121 NA intron (NR_111953, intron 2 of 3) CpG 749 NR_109754 728855 Hs.456578 NR_024510 ENSG00000235398 LINC00623 CH17-118O6.2 long intergenic non-protein coding RNA 623 ncRNA 0.091346 0.660287 9(TCGGCGCC,+,0.00) 13(CGCCGGAC,+,0.00) -40(TGGAGCCGAAGG,+,0.00) 561_WT_peak_5525 chr4 83956370 83956618 + 121 NA intron (NM_016129, intron 1 of 9) intron (NM_016129, intron 1 of 9) 255 NM_001258006 51138 Hs.190384 NM_016129 HPRD:09888 COPS4 CSN4 COP9 signalosome subunit 4 protein-coding 0.052419 0.586345 561_WT_peak_1182 chr11 809254 810093 + 120 NA promoter-TSS (NM_001004) promoter-TSS (NM_001004) -263 NM_001004 6181 Hs.437594 NM_001004 RPLP2 D11S2243E|LP2|P2|RPP2 ribosomal protein, large, P2 protein-coding 0.109654 0.692857 399(GGGGGAGGGGGA,-,0.00) 190(GGCGGCCGCG,+,0.00),592(CTCCGCCGCC,-,0.00) -21(AGGCGGCT,+,0.00) 392(CTGGGAAGGGGG,-,0.00),641(CCGGGGTGCCGG,-,0.00),653(CTGGGGACGCGG,-,0.00) 539(TCGGCGCC,+,0.00) 487(CGCGCACG,+,0.00),576(CGCACGCG,-,0.00) 113(CCCGCGGC,-,0.00) 453(TCGTGACG,+,0.00) 76(CAGCTTCTGCCC,-,0.00),527(CCGCCTCTTGCG,-,0.00) -35(AGTCGCTA,+,0.00) -151(GGGGTGAGCGGG,-,0.00),389(GGGCTGGGAAGG,-,0.00) -26(GTCCGAGG,-,0.00),13(CGTGGGAC,+,0.00),285(GTCCAACG,-,0.00) 209(GGGAGCTGTAGG,+,0.00) 485(GCCGCGCA,+,0.00) -63(GCGGGGGCGGCC,+,0.00),30(CCGCGGCCAGGG,+,0.00) 479(TGCGGCGCCGCG,+,0.00),479(TGCGGCGCCGCG,-,0.00) -23(CGAGGCGG,+,0.00),187(CGTGGCGG,+,0.00) 184(GGGCGTGGCGGC,-,0.00) 391(GCTGGGAAGG,+,0.00) 561_WT_peak_5119 chr3 52029705 52030049 + 120 NA promoter-TSS (NM_000992) promoter-TSS (NM_000992) 81 NM_000992 6159 Hs.425125 NM_000992 HPRD:03495 RPL29 HIP|HUMRPL29|L29|RPL29P10|RPL29_3_370 ribosomal protein L29 protein-coding 0.095930 0.631884 30(AGAACCGGAAGA,+,0.00) -97(CCGACAGA,+,0.00),-86(ACGGTCGG,-,0.00) -59(CCCGCGCCCCGC,-,0.00),110(CCCAGGCTCCGC,-,0.00) 111(CCAGGCTCCGCG,-,0.00) 118(CCGCGAAG,-,0.00) -68(TCTCCGCAGC,-,0.00),-54(GCCCCGCCGC,-,0.00),49(GCTGCGGTGC,+,0.00) 561_WT_peak_6573 chr7 2393514 2393758 + 120 NA promoter-TSS (NM_003751) promoter-TSS (NM_003751) -838 NM_001037283 8662 Hs.371001 NM_003751 HPRD:06795 EIF3B EIF3-ETA|EIF3-P110|EIF3-P116|EIF3S9|PRT1 eukaryotic translation initiation factor 3, subunit B protein-coding 0.098361 0.644898 -69(AGCCACAT,-,0.00) 30(CCCCCGCC,-,0.00) -36(CCCGCGCA,+,0.00) 561_WT_peak_585 chr1 161284103 161284582 + 120 NA intron (NM_001035513, intron 1 of 3) CpG 176 NR_103459 6391 Hs.444472 NM_003001 SDHC CYB560|CYBL|PGL3|QPS1|SDH3 succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa protein-coding 0.068894 0.627083 293(GTCCTACG,-,0.00) 101(TTTTCCCG,-,0.00) 172(CCCTCGGCTCTC,-,0.00) -134(CGCGCCTCCGCC,-,0.00) 561_WT_peak_6788 chr7 102234063 102234589 + 120 NA intron (NM_001079877, intron 13 of 19) CpG-24757 -21258 NM_001097615 548644 Hs.610255 NM_001015884 HPRD:18684 POLR2J3 POLR2J2|RPB11b1|RPB11b2 polymerase (RNA) II (DNA directed) polypeptide J3 protein-coding 0.095057 0.719165 -38(CGTCCGCG,-,0.00),296(CGCGCACG,+,0.00),298(CGCACGCG,-,0.00) 271(TCGTGCTG,+,0.00) 129(CCTTAGGCTCCG,-,0.00) 28(GGCACAGGAAGC,+,0.00),185(GCTCCCTGGTTC,-,0.00) 340(GCGGGGCACGCG,+,0.00) 232(AACCCGGCCC,-,0.00) -133(GGCCAGGGCCCC,-,0.00) 561_WT_peak_6416 chr6 106545684 106545888 + 120 NA promoter-TSS (NM_182907) promoter-TSS (NM_182907) -951 NM_182907 639 Hs.436023 NM_001198 HPRD:04572 PRDM1 BLIMP1|PRDI-BF1 PR domain containing 1, with ZNF domain protein-coding 0.004902 0.409756 -23(AGCCACAT,-,0.00) 561_WT_peak_6313 chr6 37786556 37786795 + 120 NA promoter-TSS (NM_021943) promoter-TSS (NM_021943) -632 NM_021943 60685 Hs.36959 NM_021943 HPRD:12121 ZFAND3 TEX27 zinc finger, AN1-type domain 3 protein-coding 0.041841 0.600000 -17(CTCCCCGGAATC,+,0.00) 42(CCGGGAAGCCAG,-,0.00) 33(CCGACGCC,+,0.00) 7(GAGCGGCAGCTC,+,0.00) 31(CTCCGACG,-,0.00) 561_WT_peak_1709 chr12 53764904 53765074 + 120 NA Intergenic Intergenic -8990 NM_138473 6667 Hs.620754 NM_003109 HPRD:01796 SP1 - Sp1 transcription factor protein-coding 0.023529 0.549708 -52(CGGAAGAAGCGC,+,0.00) 561_WT_peak_5110 chr3 50275220 50275452 + 120 NA intron (NM_001282618, intron 1 of 7) intron (NM_001282618, intron 1 of 7) 1747 NM_001282618 2771 Hs.77269 NM_002070 HPRD:00764 GNAI2 GIP|GNAI2B|H_LUCA15.1|H_LUCA16.1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 protein-coding 0.043103 0.592275 18(GCCTCCGGGGCA,-,0.00) 54(ATCCGCTT,-,0.00) 15(CCGGCCTCCGGG,+,0.00) -57(TCGTGCTG,+,0.00) 58(GCTTCGCTGC,-,0.00) 561_WT_peak_154 chr1 32573651 32573888 + 120 NA intron (NM_012316, intron 1 of 13) intron (NM_012316, intron 1 of 13) 125 NM_012316 23633 Hs.470588 NM_012316 HPRD:09465 KPNA6 IPOA7|KPNA7 karyopherin alpha 6 (importin alpha 7) protein-coding 0.067511 0.626050 -116(CTCCGCCGCC,-,0.00) -95(AGCGGACCCGCG,+,0.00) -111(CCGCCAAG,-,0.00) 561_WT_peak_602 chr1 167189398 167189713 + 120 NA promoter-TSS (NM_002697) promoter-TSS (NM_002697) -511 NM_001198786 5451 Hs.283402 NM_002697 HPRD:01250 POU2F1 OCT1|OTF1|oct-1B POU class 2 homeobox 1 protein-coding 0.085714 0.636076 -43(AGCGGCTT,-,0.00) -67(AGGGCCGGAA,-,0.00) -51(TAGCGAGG,-,0.00) -11(TGCGCGGA,-,0.00) -99(CGTGGCGG,+,0.00) 25(CACGCGGGCCGC,-,0.00) 561_WT_peak_1636 chr12 27975102 27975403 + 120 NA Intergenic Intergenic 42065 NM_020782 57542 Hs.505104 NM_020782 HPRD:17237 KLHL42 Ctb9|KLHDC5 kelch-like family member 42 protein-coding 0.023256 0.443709 -59(CTGTTTTG,-,0.00) 561_WT_peak_695 chr1 205180456 205180933 + 120 NA promoter-TSS (NM_015375) promoter-TSS (NM_015375) 33 NM_015375 25778 Hs.6874 NM_015375 HPRD:11495 DSTYK CAKUT1|DustyPK|RIP5|RIPK5 dual serine/threonine and tyrosine protein kinase protein-coding 0.100629 0.686192 94(CCTCCCTCCTCC,+,0.00) -161(CCGTGAGGGAGG,-,0.00),98(CCTCCTCCCCGC,+,0.00) -10(GGGGCCGGGA,-,0.00) 149(CCCCCGCC,-,0.00),285(GCCGCGGG,+,0.00) -66(TAGCGGCG,-,0.00),217(CGCCGCTA,+,0.00) 204(CCAAACCG,+,0.00) 83(CGCAGGCCCGGC,-,0.00) 1(CCGAGACG,-,0.00) -16(GCCGCCGGGGCC,+,0.00),18(CCCCATGGCACC,-,0.00) 561_WT_peak_754 chr1 226249475 226249861 + 120 NA promoter-TSS (NR_002315) promoter-TSS (NR_002315) -740 NM_002107 3020 Hs.533624 NM_002107 HPRD:03082 H3F3A H3.3A|H3F3 H3 histone, family 3A protein-coding 0.111399 0.720930 -50(GGAGGAGAGCGA,-,0.00) 109(GCGGGAAGGAGG,-,0.00) 124(TCGGTCCG,-,0.00) 63(TCGGGCCG,+,0.00) 129(CCGCCCCTCCCG,-,0.00) -93(GGCCGACG,-,0.00),55(CGGCGGAC,+,0.00),122(CGTCGGTC,+,0.00),157(GTCCGACA,-,0.00) -14(CAACACCG,+,0.00) -117(TGCGCGCT,-,0.00),100(AGCGCGCA,+,0.00) 204(GCTGGGGAGC,+,0.00) 561_WT_peak_7087 chr8 101734043 101734328 + 120 NA 5' UTR (NM_002568, exon 1 of 15) 5' UTR (NM_002568, exon 1 of 15) 130 NM_002568 26986 Hs.387804 NM_002568 HPRD:05247 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein, cytoplasmic 1 protein-coding 0.070175 0.496503 -115(GCGGGCGGGCGG,-,0.00),96(CCGGGGAGAAGG,-,0.00) -118(GCCGCGGG,+,0.00),-40(GGCGGGGG,+,0.00) -36(GGGGAGACGCGG,+,0.00),98(GGGGAGAAGGGG,+,0.00) 78(CACTCTCAGCAC,+,0.00) -123(GCGGGGCCGCGG,+,0.00) -124(TGCGGGGCCGCG,+,0.00) -126(GCTGCGGGGC,+,0.00) 561_WT_peak_7201 chr9 3528493 3528848 + 120 NA Intergenic MSTA|LTR|ERVL-MaLR -2669 NM_134428 5991 Hs.136829 NM_002919 HPRD:03215 RFX3 - regulatory factor X, 3 (influences HLA class II expression) protein-coding 0.019718 0.466292 48(TCGCCTTCCGCC,+,0.00) 45(CCTTCGCCTTCC,-,0.00) 94(GCTTCCTGTTAA,-,0.00) 561_WT_peak_1532 chr11 133815001 133815312 + 120 NA intron (NM_001277285, intron 2 of 19) intron (NM_001277285, intron 2 of 19) 11493 NM_001277285 22997 Hs.204121 NM_014987 ENSG00000080854 IGSF9B - immunoglobulin superfamily, member 9B protein-coding 0.025723 0.580128 -147(AAGCCTCT,+,0.00) 561_WT_peak_4066 chr2 54013839 54014130 + 120 NA promoter-TSS (NM_001127397) promoter-TSS (NM_001127397) 1 NM_001201965 51130 Hs.40763 NM_016115 HPRD:05769 ASB3 ASB-3 ankyrin repeat and SOCS box containing 3 protein-coding 0.109966 0.667808 -75(AAGCGGCT,+,0.00) 99(CGTAGGCG,-,0.00) 58(CCGTCCGA,+,0.00) 89(TCCCGGCCCC,+,0.00) -11(GTCCGAGG,-,0.00) 107(GACGGCTCCGCG,-,0.00) 561_WT_peak_4183 chr2 87304194 87304568 + 119 NA promoter-TSS (NR_026846) promoter-TSS (NR_026846) -845 NR_026846 285074 Hs.424184 NM_001012626 HPRD:17345 LOC285074 - anaphase promoting complex subunit 1 pseudogene pseudo 0.082888 0.677333 -82(AGCCGCTT,-,0.00) -138(GGCGGGGG,+,0.00),-111(GGCGGGGG,+,0.00) 172(TTTACCCC,-,0.00),182(CGGGTAAA,+,0.00) 561_WT_peak_2371 chr14 102289881 102290348 + 119 NA intron (NM_001161725, intron 3 of 15) intron (NM_001161725, intron 3 of 15) 13974 NM_178587 5527 Hs.368264 NM_002719 HPRD:03385 PPP2R5C B56G|PR61G protein phosphatase 2, regulatory subunit B', gamma protein-coding 0.017131 0.459402 37(CGGTTCTG,-,0.00) 561_WT_peak_2512 chr15 64679682 64680254 + 119 NA promoter-TSS (NR_109934) promoter-TSS (NR_109934) -35 NM_016213 9325 Hs.500340 NM_016213 HPRD:05140 TRIP4 ASC-1|ASC1|HsT17391|ZC2HC5 thyroid hormone receptor interactor 4 protein-coding 0.057692 0.570681 239(CCGGGGAGCCGC,-,0.00),340(CGGGGAAGGAGC,-,0.00),378(CCGGGAAGCGGG,-,0.00) 9(TCGACTCC,+,0.00) 46(AGGAAGAAGCAG,+,0.00) -34(GTCCTACG,-,0.00) 242(GGGAGCCGCTGG,+,0.00) 51(GAAGCAGGAGGC,+,0.00),375(GAACCGGGAAGC,+,0.00) 240(CGGGGAGCCGCT,+,0.00) -136(GCCTCTCAGC,-,0.00) 561_WT_peak_4476 chr2 220024989 220025259 + 119 NA intron (NM_024782, intron 1 of 7) CpG 463 NM_024782 79840 Hs.225988 NM_024782 HPRD:07784 NHEJ1 XLF nonhomologous end-joining factor 1 protein-coding 0.081481 0.671587 -80(AGCCGCCA,-,0.00),41(AGCGGCTT,-,0.00) 98(TCCACGCC,+,0.00) 49(CGTCGCAC,+,0.00) 27(CAAAGCCG,+,0.00) 7(GGCGCGGC,-,0.00) 561_WT_peak_393 chr1 114414295 114414684 + 119 NA promoter-TSS (NM_001193431) promoter-TSS (NM_001193431) -114 NM_001193431 26191 Hs.535276 NM_012411 HPRD:06100 PTPN22 LYP|LYP1|LYP2|PEP|PTPN8 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) protein-coding 0.010283 0.464103 -145(AGACACCT,-,0.00) 561_WT_peak_2636 chr15 102264228 102264632 + 119 NA exon (NM_152334, exon 1 of 19) exon (NM_152334, exon 1 of 19) 215 NM_152334 123283 Hs.657163 NM_152334 HPRD:15469 TARSL2 - threonyl-tRNA synthetase-like 2 protein-coding 0.138614 0.760494 172(CTCCGCCGCC,-,0.00),187(CTCGGCCGCC,-,0.00) -46(TGGCGGCT,+,0.00) 192(CCGCCATCGCGG,+,0.00) 159(GCGACGCC,+,0.00),217(CCGACGCC,+,0.00) 143(TCCTGCCG,+,0.00) -152(CCGTCTCGGCCC,+,0.00) -145(GGCCCGCCCCGC,-,0.00) -45(GGCGGCTCCGCT,-,0.00),24(CCCGGAGCTGCG,+,0.00) -151(CGTCTCGG,+,0.00) 161(GACGCCACGGCC,+,0.00),176(GCCGCCAGGGCC,+,0.00),191(GCCGCCATCGCG,+,0.00),193(CGCCATCGCGGC,-,0.00) 65(GCCTGGCAGC,-,0.00) -52(GTGGCCTGGCGG,+,0.00) 561_WT_peak_1538 chr12 94184 94445 + 119 NA Intergenic TAR1|Satellite|telo 6330 NR_028269 100288778 Hs.585931 NR_028269 LOC100288778 - WAS protein family homolog 1 pseudogene pseudo 0.045977 0.671756 32(GGCGCCCTGGCA,+,0.00) 561_WT_peak_4316 chr2 136765801 136766124 + 119 NA TTS (NR_110199) TTS (NR_110199) -22708 NM_001293312 1615 Hs.503787 NM_001349 HPRD:04361 DARS HBSL|aspRS aspartyl-tRNA synthetase protein-coding 0.015480 0.549383 -130(CGGATAAA,+,0.00) 561_WT_peak_4344 chr2 160372812 160373079 + 119 NA intron (NM_001289975, intron 2 of 35) intron (NM_001289975, intron 2 of 35) -98860 NR_110588 643072 Hs.632541 NR_110587 LOC643072 - uncharacterized LOC643072 ncRNA 0.007491 0.380597 561_WT_peak_1496 chr11 117873688 117874247 + 119 NA Intergenic Intergenic 16861 NM_001558 3587 Hs.504035 NM_001558 HPRD:00911 IL10RA CD210|CD210a|CDW210A|HIL-10R|IL-10R1|IL10R interleukin 10 receptor, alpha protein-coding 0.003578 0.473214 -55(CCCCCGGC,-,0.00) 245(CAGTTTTG,-,0.00) 146(GGGCTGATTT,+,0.00) 561_WT_peak_5022 chr3 15333488 15334021 + 119 NA intron (NM_001018009, intron 3 of 8) intron (NM_001018009, intron 3 of 8) 38063 NR_046084 100505696 Hs.745026 NR_046084 ENSG00000224660 SH3BP5-AS1 - SH3BP5 antisense RNA 1 ncRNA 0.011257 0.520599 561_WT_peak_3475 chr18 29598519 29598862 + 119 NA 5' UTR (NM_017831, exon 1 of 6) 5' UTR (NM_017831, exon 1 of 6) 245 NM_017831 54941 Hs.633703 NM_017831 HPRD:11500 RNF125 TRAC-1|TRAC1 ring finger protein 125, E3 ubiquitin protein ligase protein-coding 0.096210 0.671512 -100(TCCGCCTCCGCG,+,0.00) -79(AGGCGGCT,+,0.00),-3(AGGTGGCT,+,0.00) 35(GGCGGCGA,-,0.00) -38(GCCCTGCCCT,+,0.00),50(TGGGCCGGGA,-,0.00) -55(CCCGCGGC,-,0.00) -43(CGCTCGCCCTGC,-,0.00) -53(CGCGGCCGCGCG,-,0.00) -81(CTAGGCGG,+,0.00) -57(GCCCCGCGGC,-,0.00),28(GCTGGGAGGC,+,0.00),112(GCTTCGCAGC,-,0.00) 561_WT_peak_3649 chr19 14116802 14117036 + 119 NA 5' UTR (NM_002918, exon 1 of 21) 5' UTR (NM_002918, exon 1 of 21) 215 NM_002918 5989 Hs.655215 NM_002918 HPRD:02476 RFX1 EFC|RFX regulatory factor X, 1 (influences HLA class II expression) protein-coding 0.089744 0.719149 -120(AGACACCT,-,0.00),-23(AAACGCTT,-,0.00) -78(CAGCCACCCCGG,+,0.00) -3(GGAGTCGA,-,0.00) -156(GACCGCCCGCCC,+,0.00) -152(GCCCGCCCCT,+,0.00),38(CGGGCCGGGC,-,0.00) -150(CCGCCCCTTCCC,-,0.00),-49(CCGCTTCTCCCC,-,0.00) -98(GCCGCCCA,+,0.00) -108(CCCCGGCCCCGC,-,0.00),-90(CCCCGGCCCGGC,-,0.00),41(GCCGGGCCTGGG,+,0.00) -103(GCCCCGCCGC,-,0.00) 561_WT_peak_760 chr1 227127044 227127586 + 119 NA promoter-TSS (NM_020247) promoter-TSS (NM_020247) -623 NM_020247 56997 Hs.118241 NM_020247 HPRD:07375 ADCK3 ARCA2|CABC1|COQ10D4|COQ8|SCAR9 aarF domain containing kinase 3 protein-coding 0.086716 0.646409 124(AGAGGCTT,-,0.00) 335(TCCACGCC,+,0.00) 184(CCGGCCGA,+,0.00) 192(AGGGCCGGAA,-,0.00) -139(TCGAGCCG,+,0.00) 15(CAAAACCC,+,0.00),133(CTGTTTTG,-,0.00) 128(GCTTCCTGTTTT,-,0.00) 209(TGCGCGGC,-,0.00) 561_WT_peak_2041 chr13 49071094 49071322 + 119 NA intron (NM_001286831, intron 10 of 11) L2b|LINE|L2 36184 NM_001268 1102 Hs.652712 NM_001268 HPRD:04631 RCBTB2 CHC1L|RLG regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 protein-coding 0.004386 0.458515 561_WT_peak_3903 chr19 56166398 56166867 + 119 NA intron (NM_001012478, intron 1 of 11) CpG-14459 1216 NM_001012478 11338 Hs.528007 NM_007279 HPRD:01872 U2AF2 U2AF65 U2 small nuclear RNA auxiliary factor 2 protein-coding 0.136461 0.687234 -106(CGCGGCCGCC,-,0.00) -156(AAGCGGCT,+,0.00) -33(CCGGGGTCGCGG,-,0.00),225(CGGGGGACGCGG,-,0.00) -70(GAGCGGCAGCTC,+,0.00) -110(CCTACGCG,-,0.00) 17(CCCCCGCC,-,0.00) 234(CGGCACGA,-,0.00) 3(CGTCGCTC,+,0.00) -90(TGTCGGAC,+,0.00) -11(TGGGCGGC,-,0.00) 152(GCGGGGCGCGGG,+,0.00) -9(GGCGGCTCCTCG,-,0.00) -109(CTACGCGG,+,0.00) 176(GCGCACGGCGGC,-,0.00) 149(GCGGCGGGGC,+,0.00) 561_WT_peak_3648 chr19 14063322 14063497 + 119 NA promoter-TSS (NM_138353) promoter-TSS (NM_138353) 90 NM_138353 90379 Hs.443636 NM_138353 ENSG00000132017 DCAF15 C19orf72 DDB1 and CUL4 associated factor 15 protein-coding 0.120000 0.750000 -20(GGAGCCGGAGTG,+,0.00) -102(CGGGGGAGCCGG,-,0.00) -127(GGGCTGGGAGCG,-,0.00) -38(CGGGTCAA,+,0.00) -99(GGGAGCCGGAGG,+,0.00) -118(GCGGCGGCGGCG,+,0.00),-111(CGGCGGCCCCGG,-,0.00) 561_WT_peak_15 chr1 1509670 1510041 + 119 NA intron (NM_014188, intron 1 of 4) CpG 407 NM_014188 29101 Hs.30026 NM_014188 HPRD:13712 SSU72 HSPC182|PNAS-120 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) protein-coding 0.129380 0.731183 -36(GGAGGAGGGAGG,-,0.00) -84(CGGCCCGGCTTC,+,0.00),188(GTGGCCGGAAGC,+,0.00) 178(GGCGGCCGCG,+,0.00) -40(CCGGGGAGGAGG,-,0.00) -103(CCGACCCA,+,0.00) -87(GCCCGGCCCG,+,0.00) 120(CCCGCGGC,-,0.00) 51(CGGTTCTG,-,0.00) -2(GCGGGGACAGGG,+,0.00) -93(AGCGCGGCCC,-,0.00) 96(GACGGCATGGCG,+,0.00),98(CGGCATGGCGGC,-,0.00),182(GCCGCGGTGGCC,+,0.00) -90(GCGGCCCGGCCC,+,0.00),-85(CCGGCCCGGCTT,+,0.00) 561_WT_peak_6288 chr6 32821598 32822226 + 119 NA promoter-TSS (NM_002800).3 promoter-TSS (NM_002800).3 -26 NM_002800 5698 Hs.654585 NM_002800 HPRD:01514 PSMB9 LMP2|PSMB6i|RING12|beta1i proteasome (prosome, macropain) subunit, beta type, 9 protein-coding 0.074841 0.642289 216(GGCGGCGA,-,0.00) 48(AGGGCGGGGC,-,0.00) 100(TAGCGCCG,-,0.00) 144(GGCGGCGCCGCG,+,0.00),144(GGCGGCGCCGCG,-,0.00) -149(AAAGCGGCCG,-,0.00),49(GGGCGGGGCT,+,0.00),113(AAAGCAGCCC,-,0.00),159(GGGCGGGGCT,+,0.00) 151(CCGCGAAG,-,0.00) 119(GCCCCGCAGC,-,0.00) 561_WT_peak_6530 chr6 157744334 157744791 + 119 NA 5' UTR (NM_018452, exon 1 of 4) 5' UTR (NM_018452, exon 1 of 4) 729 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding 0.065646 0.628821 -87(CCGACGCC,+,0.00) 186(GGGGCCGGGA,-,0.00) 64(AACTGGGCCC,-,0.00) 561_WT_peak_7294 chr9 73028517 73029288 + 118 NA 5' UTR (NM_001206, exon 1 of 2) 5' UTR (NM_001206, exon 1 of 2) 671 NM_001206 687 Hs.150557 NM_001206 HPRD:04211 KLF9 BTEB|BTEB1 Kruppel-like factor 9 protein-coding 0.089494 0.623057 15(CTCGGCCGCC,-,0.00) 108(AGACACTT,-,0.00) 27(GCCGTCGA,-,0.00) -106(GCGCGCCGGCCC,+,0.00),92(GAGCGCCAGGTC,+,0.00) -96(CCCTCTGAGCCG,+,0.00) 570(CGGTTTTC,-,0.00) 52(TTCACCCG,-,0.00),115(TTTTCCCG,-,0.00) -140(CCCCTGCCCCGC,-,0.00),-103(CGCCGGCCCCTC,-,0.00) -62(CGTGGCGG,+,0.00),20(CCGCCTCG,-,0.00),67(CGACGCGG,+,0.00) -162(GCGCCGCCGC,-,0.00),411(GCTGGGAGGC,+,0.00) 561_WT_peak_4167 chr2 85555085 85555415 + 118 NA 5' UTR (NM_001206841, exon 1 of 4) 5' UTR (NM_001206841, exon 1 of 4) 169 NM_001206840 10618 Hs.593382 NM_006464 HPRD:04343 TGOLN2 TGN38|TGN46|TGN48|TGN51|TTGN2 trans-golgi network protein 2 protein-coding 0.106061 0.664653 131(GAGCTGGAGCTC,-,0.00) -97(TCCCGCCCCT,+,0.00) 34(CCTCTTCTTCCT,-,0.00) -7(CCTTCGGCTGCT,-,0.00) -59(CCGCCAAG,-,0.00),101(CCGCCTCG,-,0.00) 561_WT_peak_3272 chr17 57287235 57287548 + 118 NA promoter-TSS (NM_018149) promoter-TSS (NM_018149) 20 NM_018149 55181 Hs.7296 NM_018149 HPRD:08551 SMG8 C17orf71 SMG8 nonsense mediated mRNA decay factor protein-coding 0.057508 0.554140 -20(CGGACCGGAAGG,+,0.00),121(CGGACCGGAGCC,+,0.00) -37(CCGGTCGG,-,0.00) -76(CTGAAGAAGCGG,+,0.00) -32(CGGTTTTA,-,0.00) 130(GCCTCCATGGCG,+,0.00),132(CTCCATGGCGGG,-,0.00) 561_WT_peak_3005 chr17 6554517 6554966 + 118 NA promoter-TSS (NM_001105520) promoter-TSS (NM_001105520) 213 NM_016060 51003 Hs.567493 NM_016060 HPRD:14382 MED31 3110004H13Rik|Soh1 mediator complex subunit 31 protein-coding 0.037862 0.535556 252(TCTTCCGGTCCC,-,0.00) 0(AGACGCTA,-,0.00) 149(TAGCGACA,-,0.00) 561_WT_peak_5411 chr4 7865681 7865877 + 118 NA intron (NM_198595, intron 3 of 16) (CATCC)n|Simple_repeat|Simple_repeat 75874 NM_198595 60312 Hs.529369 NM_021638 HPRD:09747 AFAP1 AFAP|AFAP-110|AFAP110 actin filament associated protein 1 protein-coding 0.000000 0.497462 561_WT_peak_5752 chr5 54429960 54430225 + 118 NA intron (NM_152623, intron 5 of 11) intron (NM_152623, intron 5 of 11) -25892 NM_001008397 493869 Hs.289044 NM_001008397 GPX8 EPLA847|GPx-8|GSHPx-8|UNQ847 glutathione peroxidase 8 (putative) protein-coding 0.007547 0.413534 -131(AGGCCGCT,+,0.00) 84(CAAAACTG,+,0.00) 561_WT_peak_4303-2 chr2 133012955 133013322 + 118 NA intron (NR_027020, intron 1 of 4) SSU-rRNA_Hsa|rRNA|rRNA 1515 NR_031608 100313824 NR_031608 miRBase:MI0006336 MIR663B MIRN663B microRNA 663b ncRNA 0.027248 0.478261 -70(GGGCTGTGGCTC,-,0.00) 131(CGTCACTA,+,0.00) 561_WT_peak_5590 chr4 128801740 128802500 + 118 NA promoter-TSS (NM_001190801) promoter-TSS (NM_001190801) 104 NM_014264 10733 Hs.172052 NM_014264 HPRD:10387 PLK4 SAK|STK18 polo-like kinase 4 protein-coding 0.084211 0.608410 32(GCTTCCGGCCCT,-,0.00),45(GGCCCCGAAGTC,+,0.00) -153(AAACGCTT,-,0.00) 254(TCGTCGCC,+,0.00) 7(CCGCCCGA,+,0.00),158(TCGGACGG,-,0.00) 34(TTCCGGCCCT,+,0.00),582(GCCCGCCCCT,+,0.00) 270(CGGTTTAG,-,0.00) -42(TTTACCCG,-,0.00) 89(GCCGCGCA,+,0.00),204(ACCGCCCA,+,0.00) 512(GCGGGGCGGGCA,+,0.00) 576(GGAGCGGCCC,-,0.00) 294(GGCGCCAAGGCC,+,0.00) 22(TCTCCGCAGC,-,0.00),436(GCAGCGGGGC,+,0.00),509(GCTGCGGGGC,+,0.00) 303(GCCGGCTGGCTG,+,0.00) 561_WT_peak_2093 chr13 107220000 107220463 + 118 NA exon (NM_018011, exon 1 of 4) exon (NM_018011, exon 1 of 4) 283 NM_018011 55082 Hs.508644 NM_018011 ARGLU1 - arginine and glutamate rich 1 protein-coding 0.140389 0.681034 -120(GCGCGCTCCCGG,+,0.00) 247(GGCGTCTA,-,0.00) 180(GGGCTGGCGGTT,-,0.00) -72(CGCGAACG,+,0.00),-9(CGCACGCG,-,0.00),173(CGGACGCG,-,0.00) -139(GCGGTCGG,-,0.00),-135(TCGGGCGG,-,0.00) -102(TCGCGCCG,+,0.00),72(CGGGACGA,-,0.00) 170(CTTCGGAC,+,0.00) 240(TTTTCCCG,-,0.00) -105(CGCTCGCGCCGG,-,0.00) 92(AGACCGGCCC,-,0.00) 178(GCGGGCTGGCGG,+,0.00) 561_WT_peak_1162 chr10 124768035 124768280 + 118 NA promoter-TSS (NM_001271840) promoter-TSS (NM_001271840) 46 NM_001271840 64376 Hs.501289 NM_001271840 HPRD:05873 IKZF5 PEGASUS|ZNFN1A5 IKAROS family zinc finger 5 (Pegasus) protein-coding 0.114286 0.670732 -12(CGAGCCGGCAGC,+,0.00) -23(TCGCCGCC,+,0.00),58(TCGCCGCC,+,0.00) -139(CCTACCGA,+,0.00),-17(CCGTCCGA,+,0.00) -82(CGCCACGA,-,0.00),-33(TCCTGCCG,+,0.00) 59(CGCCGCCGCCGC,-,0.00) -83(CCGCCACG,-,0.00),-28(CCGCGTCG,-,0.00) -26(GCGTCGCCGC,-,0.00) -91(CAGCCGGCCCGC,-,0.00) 561_WT_peak_3266 chr17 56415243 56415494 + 118 NA intron (NR_038416, intron 1 of 2) intron (NR_038416, intron 1 of 2) 805 NR_038417 100506779 Hs.718477 NR_038410 ENSG00000265148 BZRAP1-AS1 - BZRAP1 antisense RNA 1 ncRNA 0.019920 0.630952 -16(AGGCCAGGGA,-,0.00) -23(GCCCCCAAGGCC,+,0.00),69(CCCGCCAGGGCC,+,0.00) 561_WT_peak_5720 chr5 43017938 43018465 + 118 NA non-coding (NR_034086, exon 1 of 2) non-coding (NR_034086, exon 1 of 2) 712 NR_034086 648987 Hs.649468 NR_034085 ENSG00000177738 LOC648987 - uncharacterized LOC648987 ncRNA 0.091082 0.604167 332(CTCGGCGGCC,-,0.00),335(GGCGGCCGAA,+,0.00) 19(TCGTGCCC,+,0.00),175(CTGCACGA,-,0.00) 42(TAGCGCCG,-,0.00),161(CGGCGCTA,+,0.00) 299(CGGTTTTT,-,0.00) 286(TGCGCGGA,-,0.00) 66(GCGGGTCCAGCG,+,0.00),289(GCGGAGCCGGCG,+,0.00) 288(CGCGGAGCCGGC,+,0.00) 157(GCGGCGGCGC,+,0.00) 561_WT_peak_3030 chr17 8023511 8023801 + 118 NA TTS (NM_032580) TTS (NM_032580) -1422 NM_001165960 59344 Hs.232770 NM_021628 HPRD:06231 ALOXE3 ARCI3|E-LOX|eLOX-3|eLOX3 arachidonate lipoxygenase 3 protein-coding 0.044828 0.487973 38(CTGCACGA,-,0.00) -46(GCCTGGCAGC,-,0.00) -48(CAGCCTGGCAGC,-,0.00) 561_WT_peak_2645 chr16 745459 745709 + 118 NA exon (NM_153350, exon 3 of 6) exon (NM_153350, exon 3 of 6) -5184 NM_032259 84219 Hs.459632 NM_032259 HPRD:15665 WDR24 C16orf21|JFP7 WD repeat domain 24 protein-coding 0.104000 0.681275 -82(TCCACGCC,+,0.00) -116(GCTGCGCA,+,0.00),-114(TGCGCAGC,-,0.00) 54(GGCCCTGGCGCG,-,0.00) -116(GCTGCGCAGC,+,0.00),-116(GCTGCGCAGC,-,0.00) 561_WT_peak_4036 chr2 40006170 40006372 + 118 NA exon (NM_025264, exon 1 of 10) exon (NM_025264, exon 1 of 10) 145 NM_025264 80745 Hs.468254 NM_025264 HPRD:15506 THUMPD2 C2orf8 THUMP domain containing 2 protein-coding 0.113861 0.729064 -118(CCGCCCACCTCC,+,0.00) -74(GGCCGCCAGCCG,+,0.00),-3(GGGCGCCAGCCT,+,0.00) -133(AGGGCAGGGA,-,0.00) -119(GCCGCCCA,+,0.00),-66(GCCGCGCC,+,0.00) -98(GCAGCGAGGC,+,0.00) 561_WT_peak_3976 chr2 18741576 18741977 + 118 NA exon (NM_020905, exon 1 of 2) exon (NM_020905, exon 1 of 2) 183 NM_020905 57665 Hs.120319 NM_020905 HPRD:10190 RDH14 PAN2|SDR7C4 retinol dehydrogenase 14 (all-trans/9-cis/11-cis) protein-coding 0.132170 0.761194 -87(CTCGGCGGCC,-,0.00),-84(GGCGGCCGTG,+,0.00) -65(AGGCCGCT,+,0.00) -151(CCGCCTCCTCGG,+,0.00),-108(CCGCGCTCCCAG,+,0.00),147(CCGCCTTACCGG,+,0.00) 175(TGTACGCG,-,0.00) -75(GGCGCGGC,-,0.00),-1(TGCGCAGC,-,0.00),194(GGCGCGGC,-,0.00) -75(GGCGCGGCCC,-,0.00) -83(GCGGCCGTGGCG,+,0.00),-81(GGCCGTGGCGCG,-,0.00) 135(GTTCCGCAGC,-,0.00) 30(CCGGCGGGCCGC,-,0.00) 561_WT_peak_421 chr1 143687377 143687725 + 118 NA intron (NR_111930, intron 1 of 8).2 intron (NR_111930, intron 1 of 8).2 424 NR_111930 100132057 Hs.585189 NR_033189 LOC100132057 - phosphodiesterase 4D interacting protein pseudogene pseudo 0.022989 0.409742 561_WT_peak_1943 chr13 21050048 21050256 + 118 NA intron (NM_015974, intron 3 of 7) intron (NM_015974, intron 3 of 7) -42167 NR_039721 100616304 NR_039721 MIR4499 - microRNA 4499 ncRNA 0.028846 0.564593 -42(CGCACGCG,-,0.00) -36(CGGCAGGA,-,0.00) 561_WT_peak_4303 chr2 133012555 133012765 + 118 NA intron (NR_027020, intron 1 of 4) SSU-rRNA_Hsa|rRNA|rRNA 1993 NR_031608 100313824 NR_031608 miRBase:MI0006336 MIR663B MIRN663B microRNA 663b ncRNA 0.052381 0.488152 561_WT_peak_1773 chr12 76328269 76328624 + 118 NA Intergenic Intergenic 97110 NM_007350 22822 Hs.602085 NM_007350 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology-like domain, family A, member 1 protein-coding 0.008451 0.353933 561_WT_peak_1793 chr12 92539100 92539653 + 118 NA 5' UTR (NM_001731, exon 1 of 2) 5' UTR (NM_001731, exon 1 of 2) 297 NM_001731 694 Hs.255935 NM_001731 BTG1 - B-cell translocation gene 1, anti-proliferative protein-coding 0.092224 0.655235 -113(TCGCCCTGCTCA,+,0.00) 112(CAGCCACCCCGG,+,0.00) -122(CCGACGCC,+,0.00),-3(GGCGGCGA,-,0.00) 76(CGGCTGGGGCTC,-,0.00) 274(TCGCTCGG,-,0.00) 231(CGGCAGGA,-,0.00) 142(AGGCTGAGAGGA,-,0.00) -124(CTCCGACG,-,0.00) 220(GAGACAGGAGGC,+,0.00) 91(GGCGCGGC,-,0.00) -139(GTGGGGCCCGCG,+,0.00),59(GCGGGGGCGGCC,+,0.00) 91(GGCGCGGCCC,-,0.00) -12(GGACACGGCGGC,-,0.00),253(AGCGATGGCGGC,-,0.00) 307(GCTCCGCAGC,-,0.00) 22(GCGGCCCGGGTG,+,0.00) 561_WT_peak_5667 chr5 5422290 5422518 + 118 NA promoter-TSS (NM_015325) promoter-TSS (NM_015325) -382 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongator complex ELL subunit 1 protein-coding 0.096491 0.672489 10(GACGCCGGGTCC,-,0.00) -160(AGCCGCCA,-,0.00),33(AGGCGTCT,+,0.00) -109(CCGCCCGCCCCG,+,0.00) -129(GGCGCCGA,-,0.00),8(TGGACGCC,+,0.00) -108(CGCCCGCCCCGC,-,0.00),-60(CCCTGGCCCAGG,-,0.00) -103(GCCCCGCAGC,-,0.00) 561_WT_peak_6713 chr7 73668828 73669216 + 118 NA promoter-TSS (NM_002914) promoter-TSS (NM_002914) -234 NM_181471 5982 Hs.647062 NM_002914 HPRD:02675 RFC2 RFC40 replication factor C (activator 1) 2, 40kDa protein-coding 0.100515 0.678663 -34(AGGTCGCT,+,0.00) -54(GCGACGCC,+,0.00) 38(AGGGCCTGGA,-,0.00) -92(CGCCCGGC,-,0.00) 72(CGGTGTTG,-,0.00) 118(GCGGGGTCCGGG,+,0.00) -56(CCGCGACG,-,0.00) -140(TGCCCTGGCGGC,-,0.00) -57(GCCGCGACGC,+,0.00),14(GCTCCGCGGC,-,0.00) 561_WT_peak_2715 chr16 19079249 19079564 + 118 NA promoter-TSS (NR_119379) promoter-TSS (NR_119379) 167 NM_001190983 10229 Hs.157113 NM_016138 HPRD:03401 COQ7 CAT5|CLK-1|CLK1 coenzyme Q7 homolog, ubiquinone (yeast) protein-coding 0.060317 0.582278 94(CCGACCTA,+,0.00),103(TTGGTCGG,-,0.00) 27(GCCCGACG,-,0.00) -82(GTGCGGCCAGCG,+,0.00) -68(CCGAGTCG,-,0.00) 561_WT_peak_4393 chr2 190627545 190628041 + 118 NA 5' UTR (NM_022353, exon 1 of 9) 5' UTR (NM_022353, exon 1 of 9) 131 NM_022353 64172 Hs.60772 NM_022353 HPRD:07026 OSGEPL1 Qri7 O-sialoglycoprotein endopeptidase-like 1 protein-coding 0.030242 0.442656 -137(AGCGGCAT,-,0.00) 215(TAGCGGCG,-,0.00) 260(CATCGGAC,+,0.00) 561_WT_peak_3111 chr17 29877011 29877248 + 118 NA Intergenic tRNA-Thr-ACG|tRNA|tRNA -9886 NR_029710 406968 NR_029710 miRBase:MI0000487 MIR193A MIRN193|MIRN193A microRNA 193a ncRNA 0.097046 0.642857 -164(CCGGGGGCGGGG,-,0.00) -61(GGCGTCGG,-,0.00) 35(CACGTACG,+,0.00),37(CGTACGCC,-,0.00) -59(CGTCGGTC,+,0.00) -82(GGCGCGGT,-,0.00) -158(GCGGGGCCGAGG,+,0.00) 561_WT_peak_4542 chr20 2451017 2451433 + 118 NA intron (NM_003091, intron 1 of 6) CpG 274 NM_003091 6628 Hs.83753 NM_003091 HPRD:01655 SNRPB COD|SNRPB1|Sm-B/B'|SmB/B'|SmB/SmB'|snRNP-B small nuclear ribonucleoprotein polypeptides B and B1 protein-coding 0.086538 0.628297 -51(GACACCGGTTCC,-,0.00),111(AGACTCGGAAGC,+,0.00) -61(CTCGGCCTCC,-,0.00) -67(AGCGACCT,-,0.00),25(AGCGGCCT,-,0.00),55(AAGTGGCT,+,0.00),201(AGAGGCCT,-,0.00),223(AGCCGATT,-,0.00) -104(GGTGTCGA,-,0.00),-29(TCGACCCC,+,0.00) -70(CCGAGCGA,+,0.00),18(CAGACCGA,+,0.00) 237(CGCCGCTA,+,0.00) 161(CGGTTCTG,-,0.00) 127(GCGCCGCCAGCC,+,0.00) -8(CCGCCAAG,-,0.00) 561_WT_peak_2690 chr16 9185424 9186135 + 118 NA 5' UTR (NM_014117, exon 1 of 4) 5' UTR (NM_014117, exon 1 of 4) 242 NM_014117 29035 Hs.221497 NM_014117 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding 0.126582 0.755618 328(GGAGGAGGGCGA,-,0.00) 220(GCCGCCGGGCCG,-,0.00) 31(GGCGGCCGAG,+,0.00),508(CTCGGCCACC,-,0.00) -105(GGCGACGA,-,0.00),285(GGCGGCGA,-,0.00) 79(TCGGCCGG,-,0.00),204(TCGGTCGC,-,0.00) -144(AGGGCGGGGA,-,0.00) 109(GGCGGGGG,+,0.00),136(GCCGCGGG,+,0.00),294(GCCGCGGG,+,0.00) 323(CGGAAGGAGGAG,+,0.00) -106(TGGCGACG,-,0.00) 202(CGTCGGTC,+,0.00) 318(AGGAGCGGAAGG,+,0.00) -49(TGCGCGGA,-,0.00),458(GCCGCGCA,+,0.00) -27(GCGGCGGCGGCG,+,0.00),82(GCCGGGCCCGGG,+,0.00),251(CGGGGGCCCCGC,-,0.00) 130(CACGGGGCCGCG,+,0.00) 142(GGGCGGGGCT,+,0.00),226(GGGCCGCTTG,+,0.00),506(AACTCGGCCA,-,0.00) 1(AGCGCCATGGGG,+,0.00),3(CGCCATGGGGGG,-,0.00),515(ACCGCCGTGGCC,+,0.00) 136(GCCGCGGGGC,+,0.00),286(GCGGCGAGGC,+,0.00),458(GCCGCGCAGC,-,0.00) 221(CCGCCGGGCCGC,-,0.00),287(CGGCGAGGCCGC,-,0.00) 561_WT_peak_1587 chr12 9911383 9911569 + 118 NA intron (NM_001781, intron 1 of 4) intron (NM_001781, intron 1 of 4) 2021 NM_001781 969 Hs.208854 NM_001781 HPRD:00119 CD69 AIM|BL-AC/P26|CLEC2C|EA1|GP32/28|MLR-3 CD69 molecule protein-coding 0.032258 0.481283 561_WT_peak_4388 chr2 187350489 187351240 + 118 NA promoter-TSS (NM_018471) promoter-TSS (NM_018471) -21 NM_018471 55854 Hs.741180 NM_018471 HPRD:13988 ZC3H15 HT010|LEREPO4|MSTP012 zinc finger CCCH-type containing 15 protein-coding 0.082557 0.606383 577(AGCCACTT,-,0.00) 57(CGTAAGCG,-,0.00),234(CGCGCACG,+,0.00),236(CGCACGCG,-,0.00),423(CGCGTAAG,+,0.00) 198(TCCCGTCCCT,+,0.00) 481(GCCGGGGG,+,0.00) 7(CGGCAGGA,-,0.00),384(TCCTGCCG,+,0.00) 267(CCTCGCTA,+,0.00) 70(GGACTGAGAGGA,-,0.00) 242(CGCAGCTCCGCT,-,0.00) 308(AGGCCGCGTT,+,0.00) -59(CCGAGTCG,-,0.00) 561_WT_peak_523 chr1 151371737 151372197 + 118 NA promoter-TSS (NM_002796) promoter-TSS (NM_002796) -74 NM_002796 5692 Hs.89545 NM_002796 HPRD:03710 PSMB4 HN3|HsN3|PROS-26|PROS26 proteasome (prosome, macropain) subunit, beta type, 4 protein-coding 0.067391 0.533623 -97(CCTCCCTCCTCC,+,0.00) 7(CTCGGTCGCC,-,0.00) 167(AAGCGTTT,+,0.00) 8(TCGGTCGC,-,0.00) 198(GGCGGGGG,+,0.00) 170(CGTTTTTG,-,0.00) -29(GATGCGAAGC,+,0.00) 561_WT_peak_2797 chr16 31519676 31520039 + 117 NA promoter-TSS (NM_022744) promoter-TSS (NM_022744) -117 NM_022744 64755 Hs.9003 NM_022744 HPRD:07839 C16orf58 RUS chromosome 16 open reading frame 58 protein-coding 0.096419 0.653846 -26(GTCCGCCG,-,0.00),26(CTTCGGAC,+,0.00) -22(GCCGCGCA,+,0.00) -127(AGCCCCGCCC,-,0.00) -161(CCGCGTCG,-,0.00) 84(GGCGCCGTGGGC,+,0.00) 561_WT_peak_7046 chr8 67837232 67837792 + 117 NA intron (NR_002599, intron 1 of 3) CpG 265 NR_002599 641638 Hs.372680 NR_002599 ENSG00000245910 SNHG6 HBII-276HG|NCRNA00058|U87HG small nucleolar RNA host gene 6 (non-protein coding) ncRNA 0.083929 0.622103 305(CTCCGCCGCC,-,0.00) 385(AGCGACAT,-,0.00) 233(CGGCACGT,-,0.00),325(CGGCATGA,-,0.00) -65(CAAGACCG,+,0.00),33(CGGTGTTG,-,0.00) 89(ACTGCGCA,+,0.00) 167(CGCCCGCTCCGC,-,0.00),299(CGCAGTCTCCGC,-,0.00) 199(GGGCCGCGCT,+,0.00) -115(CCGCCAAG,-,0.00) -116(ACCGCCAAGGCC,+,0.00),-114(CGCCAAGGCCGC,-,0.00),121(GGCCTTGGGGGC,-,0.00) 172(GCTCCGCTGC,-,0.00) 561_WT_peak_4407 chr2 192542364 192542565 + 117 NA promoter-TSS (NM_001254736) promoter-TSS (NM_001254736) -334 NM_001254736 64859 Hs.591610 NM_022837 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding 0.049751 0.524752 -40(GGGCAGGGGCTC,-,0.00) 561_WT_peak_1919 chr12 125411800 125412099 + 117 NA Intergenic tRNA-Asp-GAY|tRNA|tRNA 11856 NR_049820 100847004 NR_049820 miRBase:MI0018167 MIR5188 - microRNA 5188 ncRNA 0.053512 0.463333 104(GTCCGACT,-,0.00) -145(TTTACCTG,-,0.00) -2(ACCGCCCA,+,0.00) 561_WT_peak_176 chr1 36107118 36107425 + 117 NA promoter-TSS (NM_001199779) promoter-TSS (NM_001199779) -119 NM_001199779 5690 Hs.471441 NM_002794 PSMB2 HC7-I proteasome (prosome, macropain) subunit, beta type, 2 protein-coding 0.081433 0.558442 48(AAGTGGCT,+,0.00),129(AGCCGTTT,-,0.00) -151(GCGACGCC,+,0.00) -37(CGTACGGG,-,0.00) -141(CAGCACGA,-,0.00) -81(GGCGCGGC,-,0.00) -79(CGCGGCGCCGGG,+,0.00),-79(CGCGGCGCCGGG,-,0.00) 120(TAGCCAGGCAGC,-,0.00) 561_WT_peak_7357 chr9 98079747 98079963 + 117 NA promoter-TSS (NM_001243743) promoter-TSS (NM_001243743) 136 NM_000136 2176 Hs.494529 NM_000136 HPRD:01967 FANCC FA3|FAC|FACC Fanconi anemia, complementation group C protein-coding 0.092593 0.626728 32(CGCCCGGC,-,0.00) 20(TTTTCCCG,-,0.00) 40(AGTGGAGCCGCG,+,0.00) -119(GCGGCCTGCCGC,+,0.00) 561_WT_peak_778 chr1 228766096 228766278 + 117 NA Intergenic CpG -14207 NR_037962 58480 Hs.647774 NM_021205 HPRD:06965 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding 0.060440 0.562842 5(GGCGCCTGGCTG,+,0.00) 561_WT_peak_5080 chr3 44666526 44666737 + 117 NA promoter-TSS (NR_046658) promoter-TSS (NR_046658) 120 NM_001024855 10168 Hs.157035 NM_006991 HPRD:10322 ZNF197 D3S1363E|P18|VHLaK|ZKSCAN9|ZNF166|ZNF20|ZSCAN41 zinc finger protein 197 protein-coding 0.104265 0.731132 -149(CTCGGCTGCC,-,0.00) -111(AGCGGCCT,-,0.00) -20(CAGGGAAGGCGG,-,0.00),-8(CCCGGGACGCGG,-,0.00) -103(GGCGCCGA,-,0.00) -108(GGCCTGGCGCCG,-,0.00) -15(AAGGCGGCCC,-,0.00) -98(CGAGGCGG,+,0.00) -110(GCGGCCTGGCGC,+,0.00) 561_WT_peak_5760 chr5 55623706 55624043 + 117 NA Intergenic L2c|LINE|L2 -94688 NM_024669 79722 Hs.436214 NM_024669 HPRD:07758 ANKRD55 - ankyrin repeat domain 55 protein-coding 0.017804 0.449704 -45(GCGTGCCG,+,0.00) -27(CACTCTCCGCCC,+,0.00) 561_WT_peak_1816 chr12 96839635 96839827 + 117 NA Intergenic Intergenic -45365 NM_001170464 5128 Hs.506415 NM_002595 HPRD:09141 CDK17 PCTAIRE2|PCTK2 cyclin-dependent kinase 17 protein-coding 0.010417 0.476684 -53(GCAACAGGAAAC,+,0.00) 561_WT_peak_6893 chr7 149157632 149157814 + 117 NA intron (NM_015694, intron 1 of 5) CpG 330 NM_015694 27153 Hs.38512 NM_015694 HPRD:13849 ZNF777 - zinc finger protein 777 protein-coding 0.071429 0.617486 7(CGCCCGGC,-,0.00) -98(CCCTCTCAGGCC,+,0.00) -61(CGTCGGAG,+,0.00) 561_WT_peak_4419 chr2 197664112 197664606 + 117 NA 5' UTR (NM_001206774, exon 1 of 9) 5' UTR (NM_001206774, exon 1 of 9) 133 NM_001206774 9330 Hs.470996 NM_012086 HPRD:11997 GTF3C3 TFIIIC102|TFIIICgamma|TFiiiC2-102 general transcription factor IIIC, polypeptide 3, 102kDa protein-coding 0.068826 0.573737 101(AGAACCGGAAGA,+,0.00),157(GGAACCGGCGTC,+,0.00) 223(GCGCGCCAGACC,+,0.00) 218(CGCGTGCG,+,0.00),220(CGTGCGCG,-,0.00) 138(CCGGGGCCAGCA,+,0.00) 192(GCGCCGCAGC,-,0.00) 561_WT_peak_4519 chr2 240323095 240323379 + 117 NA promoter-TSS (NM_006037) promoter-TSS (NM_006037) -594 NM_006037 9759 Hs.20516 NM_006037 HPRD:05610 HDAC4 AHO3|BDMR|HA6116|HD4|HDAC-4|HDAC-A|HDACA histone deacetylase 4 protein-coding 0.112676 0.691228 37(GCGGGGAGCCGG,-,0.00) 63(GGCGTCCA,-,0.00) -150(AGGCGCCAGCCG,+,0.00) 2(GCGCTTAGAGGG,-,0.00) -131(CTTCGCGG,+,0.00) 53(GCCTCGCCGC,-,0.00) 46(CGGCCAGGCCTC,-,0.00) 561_WT_peak_5115 chr3 50638657 50639132 + 117 NA Intergenic Intergenic 10368 NM_013324 1154 Hs.655334 NM_013324 HPRD:03897 CISH BACTS2|CIS|CIS-1|G18|SOCS cytokine inducible SH2-containing protein protein-coding 0.018947 0.588235 -53(AGAGGCCT,-,0.00) 26(CCTTCTCTGCCC,+,0.00) 561_WT_peak_4557 chr20 5100127 5100614 + 117 NA exon (NM_002592, exon 2 of 7) exon (NM_002592, exon 2 of 7) 138 NR_028370 100302739 Hs.744934 NR_028370 PCNA-AS1 PCNA-AS|PCNAAS PCNA antisense RNA 1 ncRNA 0.088296 0.641393 -94(CCGGCTTCCCGG,+,0.00),188(GCGGGAAGGAGG,-,0.00) -23(GGTGTCGA,-,0.00),-19(TCGAAGCC,+,0.00) 173(CGCCGCTA,+,0.00),248(CGTCGCGA,+,0.00),250(TCGCGACG,-,0.00) 21(CGTGGGAC,+,0.00) -100(CCGGGGCCGGCT,+,0.00) -87(CCCGGGGCCGCG,+,0.00) -127(CCGCCAAG,-,0.00) -81(GCCGCGAGGC,+,0.00) -108(CAGGCGGGCCGG,-,0.00) 561_WT_peak_7286 chr9 70856800 70857064 + 117 NA promoter-TSS (NM_201453) promoter-TSS (NM_201453) 71 NM_001291821 445571 Hs.645337 NM_201453 CBWD3 bA561O23.1 COBW domain containing 3 protein-coding 0.090909 0.626415 -86(CGTGCGCG,-,0.00) -142(TAGCGTCG,-,0.00),-139(CGTCGCGA,+,0.00),-38(TAGGGACG,-,0.00) -84(TGCGCGGC,-,0.00) -113(CGGCCAGGCCGG,-,0.00) 561_WT_peak_7337 chr9 93809940 93810261 + 117 NA Intergenic Intergenic 27314 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA 0.009346 0.372671 115(CAGTTTTG,-,0.00) 561_WT_peak_4108 chr2 65357112 65357485 + 117 NA 5' UTR (NM_015543, exon 1 of 4) 5' UTR (NM_015543, exon 1 of 4) 137 NM_004161 5861 Hs.310645 NM_004161 HPRD:01538 RAB1A RAB1|YPT1 RAB1A, member RAS oncogene family protein-coding 0.093834 0.647059 96(GTGCGACG,-,0.00) -156(CGGGTAAT,+,0.00),11(TTTACACG,-,0.00) 133(GCCGCGCC,+,0.00) 69(CGCGGCTACGCG,-,0.00) 124(CCGCCAAG,-,0.00) 561_WT_peak_459 chr1 147090221 147090415 + 116 NA intron (NM_004326, intron 7 of 9) intron (NM_004326, intron 7 of 9) 52316 NM_016361 51205 Hs.562154 NM_016361 ACP6 ACPL1|LPAP|PACPL1 acid phosphatase 6, lysophosphatidic protein-coding 0.000000 0.384615 561_WT_peak_7346 chr9 94474474 94474729 + 116 NA Intergenic Intergenic -75974 NR_037489 100500902 NR_037489 MIR3910-2 - microRNA 3910-2 ncRNA 0.015686 0.449219 -19(TTCCTGCCCT,+,0.00) 561_WT_peak_6054 chr5 180287792 180288031 + 116 NA intron (NM_152283, intron 1 of 2) CpG 375 NM_001172638 643836 Hs.509227 NM_152283 ENSG00000196670 ZFP62 ZET|ZNF755 ZFP62 zinc finger protein protein-coding 0.050209 0.562500 -81(CAAAACAG,+,0.00) -34(CTTCTCGG,+,0.00) -46(GGGGCCCTGGCC,+,0.00) 561_WT_peak_1093 chr10 93557889 93558269 + 116 NA promoter-TSS (NM_025235) promoter-TSS (NM_025235) -31 NR_108071 100507633 Hs.291528 NR_108070 TNKS2-AS1 - TNKS2 antisense RNA 1 (head to head) ncRNA 0.107895 0.658793 180(CTCCGCCGCC,-,0.00) -17(AAGCCTCT,+,0.00) 64(CGCACGCG,-,0.00) -83(TCGTTCGG,-,0.00) 187(GCCGCGGG,+,0.00),198(GCCGGGGG,+,0.00) 15(TCGCGCCG,+,0.00),72(CGGGACGA,-,0.00) -35(CCCCTTCTCCCG,-,0.00) 23(CCTCGCTA,+,0.00) 60(ACTGCGCA,+,0.00) 174(CGCTGCCTCCGC,-,0.00) 20(CCGCCTCG,-,0.00),141(CCGCGTCG,-,0.00) 187(GCCGCGGGGC,+,0.00) 561_WT_peak_4049 chr2 43653611 43654035 + 116 NA intron (NM_022065, intron 28 of 37) intron (NM_022065, intron 28 of 37) 169290 NM_001083953 63892 Hs.369592 NM_022065 HPRD:18177 THADA GITA thyroid adenoma associated protein-coding 0.004717 0.381176 213(CTGTTTTG,-,0.00) 160(CCTTCTGCTCCA,-,0.00) 561_WT_peak_2432 chr15 39719437 39719691 + 116 NA Intergenic Intergenic -153716 NM_003246 7057 Hs.164226 NM_003246 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding 0.027559 0.529412 11(ACGTGCCG,+,0.00) 561_WT_peak_1463 chr11 101981086 101981263 + 116 NA promoter-TSS (NM_006106) promoter-TSS (NM_006106) -18 NM_001282098 10413 Hs.503692 NM_006106 HPRD:09424 YAP1 COB1|YAP|YAP2|YAP65|YKI Yes-associated protein 1 protein-coding 0.090395 0.606742 -123(GGGCGGGCGCTT,-,0.00) -71(TCAGTCGG,-,0.00) -141(GCGGGGCCGCGG,+,0.00),-130(GCGGCGCGGGCG,+,0.00) -142(GGCGGGGCCGCG,+,0.00),-134(CGCGGCGGCGCG,+,0.00),-134(CGCGGCGGCGCG,-,0.00) -137(GGCCGCGGCGGC,-,0.00) -133(GCGGCGGCGC,+,0.00) 561_WT_peak_2483 chr15 52274313 52274656 + 116 NA Intergenic Intergenic -10486 NM_138792 123169 Hs.567662 NM_138792 HPRD:11231 LEO1 RDL Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) protein-coding 0.017493 0.438953 -129(CAAAACTG,+,0.00),-104(CAAAACTG,+,0.00) 561_WT_peak_7210 chr9 6757465 6757830 + 116 NA promoter-TSS (NM_001146694) promoter-TSS (NM_001146694) 6 NM_015061 23081 Hs.709425 NM_015061 HPRD:12016 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C|bA146B14.1 lysine (K)-specific demethylase 4C protein-coding 0.093151 0.636612 93(GCTTCCGGGCAA,-,0.00) 26(TCGGCGCC,+,0.00) -7(CGTCCGCG,-,0.00) 1(CGTCGGAG,+,0.00) -123(CGGGTGAA,+,0.00) -79(GCTGCGAGCC,+,0.00) 561_WT_peak_2927 chr16 82688951 82689356 + 116 NA intron (NM_001220488, intron 2 of 14) intron (NM_001220488, intron 2 of 14) 28754 NM_001220488 1012 Hs.654386 NM_001257 HPRD:03219 CDH13 CDHH|P105 cadherin 13 protein-coding 0.007407 0.467980 561_WT_peak_4591 chr20 26189314 26189498 + 116 NA promoter-TSS (NR_030386) promoter-TSS (NR_030386) 463 NR_040095 284801 Hs.370699 NR_040095 ENSG00000227195 MIR663AHG - MIR663A host gene (non-protein coding) ncRNA 0.108696 0.697297 -145(CTCGGCCACC,-,0.00) -159(GGCGACGA,-,0.00) -6(GCCGGGGG,+,0.00) -55(AGTCGCTA,+,0.00) -157(CGACGAGCCGCG,+,0.00) 561_WT_peak_2552 chr15 75182259 75182521 + 116 NA promoter-TSS (NM_001289156) promoter-TSS (NM_001289156) 38 NM_001289157 4351 Hs.75694 NM_002435 HPRD:01108 MPI CDG1B|PMI|PMI1 mannose phosphate isomerase protein-coding 0.103053 0.676806 -144(AAGCCTCT,+,0.00) -64(GCCGCGGG,+,0.00) -75(GGGCGCAGAGGG,-,0.00) -6(GGCCGCTCCGCG,-,0.00) -121(GGGGCCTGGCGG,+,0.00) 561_WT_peak_4157 chr2 75185771 75186055 + 116 NA exon (NM_019896, exon 1 of 4) exon (NM_019896, exon 1 of 4) 138 NM_019896 56655 Hs.469060 NM_019896 POLE4 YHHQ1|p12 polymerase (DNA-directed), epsilon 4, accessory subunit protein-coding 0.116197 0.722807 -159(GGCGGCCGCG,+,0.00) -63(AGCGGCCT,-,0.00) -133(CCGGGATGGCGG,-,0.00) -53(CAGCCCCAGGCC,+,0.00) -112(CGGCAGGA,-,0.00),71(TGGCACGA,-,0.00) -59(GCCTCGCAGCCC,+,0.00) 48(GGGACAGGAAGC,+,0.00) -125(GCGGCGGCGGCG,+,0.00),-122(GCGGCGGCGGCG,+,0.00) -59(GCCTCGCAGC,-,0.00) -62(GCGGCCTCGCAG,+,0.00) 561_WT_peak_7112 chr8 110552143 110552626 + 116 NA promoter-TSS (NM_004215) promoter-TSS (NM_004215) 80 NM_004215 9166 Hs.409368 NM_004215 HPRD:05775 EBAG9 EB9|PDAF estrogen receptor binding site associated, antigen, 9 protein-coding 0.070393 0.632231 108(TCGCCATGCTCC,+,0.00) 39(GTTTCCGGGTCA,-,0.00),152(CGGCCCGGAAAG,+,0.00) 178(AGCCGCCT,-,0.00) 11(TCGACGCC,+,0.00) -59(CGTCGGCC,+,0.00) 175(CAAAGCCG,+,0.00) -42(GCCGCGCA,+,0.00) -48(CGCCTAGCCGCG,+,0.00) 244(AGGCCGATTT,+,0.00) -49(CCGCCTAG,-,0.00) 561_WT_peak_6764 chr7 99097714 99098011 + 116 NA promoter-TSS (NM_032164) promoter-TSS (NM_032164) 15 NM_032164 84124 Hs.386324 NM_032164 HPRD:18333 ZNF394 ZKSCAN14|ZSCAN46 zinc finger protein 394 protein-coding 0.057239 0.580537 49(TCGAGGCC,+,0.00) 30(CCGTGCCG,+,0.00) 561_WT_peak_7602 chrX 110924416 110924786 + 116 NA promoter-TSS (NM_001257239) promoter-TSS (NM_001257239) 203 NM_001257241 79868 Hs.443061 NM_018466 HPRD:06542 ALG13 CDG1S|CXorf45|GLT28D1|MDS031|TDRD13|YGL047W ALG13, UDP-N-acetylglucosaminyltransferase subunit protein-coding 0.086486 0.636119 -73(TCGGCGCC,+,0.00) 104(CGCCCGGC,-,0.00) 144(GTTGCCTGTTTC,-,0.00) -28(GCGGCTTGGCTC,+,0.00) 561_WT_peak_4597 chr20 30697186 30697800 + 116 NA 5' UTR (NM_014742, exon 1 of 18) 5' UTR (NM_014742, exon 1 of 18) 184 NM_014742 9777 Hs.654665 NM_014742 HPRD:15514 TM9SF4 dJ836N17.2 transmembrane 9 superfamily protein member 4 protein-coding 0.050489 0.593496 20(AGCGACCT,-,0.00),296(AGCCACCT,-,0.00) 195(TGGCGACG,-,0.00) 369(CCCTGGCCCTGC,-,0.00) 561_WT_peak_7573 chrX 70401501 70401691 + 116 NA Intergenic Intergenic -33466 NM_001097642 2705 Hs.333303 NM_000166 HPRD:02367 GJB1 CMTX|CMTX1|CX32 gap junction protein, beta 1, 32kDa protein-coding 0.026316 0.554974 -58(CCACCCTCCTCC,+,0.00) -97(CTTTCCGGTTCT,-,0.00) -92(CGGTTCTG,-,0.00) 561_WT_peak_4945 chr22 42229132 42229466 + 116 NA exon (NM_004599, exon 1 of 19) exon (NM_004599, exon 1 of 19) 216 NM_004599 6721 Hs.443258 NM_004599 HPRD:02726 SREBF2 SREBP-2|SREBP2|bHLHd2 sterol regulatory element binding transcription factor 2 protein-coding 0.128743 0.746269 29(GGAGCTGGGCGA,-,0.00) 36(GGCGACGA,-,0.00) 137(CGCGTGCG,+,0.00) -122(GCCGGGCG,+,0.00),-118(GGCGGGGG,+,0.00),-29(GCCGGGCG,+,0.00) 104(GGGAGGAAGGGG,+,0.00) -90(TGGCGACG,-,0.00) -97(TGGGCGGT,-,0.00) 90(GCGGGGGCCGCG,+,0.00) -35(CGCTGAGCCGGG,+,0.00) 561_WT_peak_4180 chr2 86790569 86790843 + 116 NA promoter-TSS (NM_001193517) promoter-TSS (NM_001193517) -86 NR_036454 51652 Hs.591582 NM_016079 HPRD:15650 CHMP3 NEDF|VPS24 charged multivesicular body protein 3 protein-coding 0.051095 0.512727 -137(CGGCACTA,-,0.00) 561_WT_peak_987 chr10 48133159 48133414 + 116 NA Intergenic Intergenic -22657 NR_033407 1517 Hs.568350 NR_033407 CTSLP2 CTSL1P2|CTSL1P5|CTSL1P7|CTSLL2|CTSLL5|CTSLL7|CTSLP5|CTSLP7|bA144G6.6|bA342C24.4 cathepsin L pseudogene 2 pseudo 0.000000 0.378906 561_WT_peak_3270 chr17 57232224 57232514 + 116 NA promoter-TSS (NM_018304) promoter-TSS (NM_018304) 431 NM_001100595 348235 Hs.463607 NM_182620 HPRD:13306 SKA2 FAM33A spindle and kinetochore associated complex subunit 2 protein-coding 0.055172 0.580756 -3(CCAGCCTCCGCC,+,0.00) 2(CTCCGCCGCC,-,0.00) -46(TGGCGGCT,+,0.00) -121(CAGCATCTCCCG,-,0.00) -65(CGGTTTAG,-,0.00) -76(CTTACCCG,-,0.00) -70(CGAGGCGG,+,0.00) 51(GGCCATGGGGGA,-,0.00) 561_WT_peak_3771 chr19 41768471 41769485 + 116 NA intron (NM_144732, intron 1 of 14) intron (NM_144732, intron 1 of 14) 597 NM_144732 11100 Hs.155218 NM_007040 HPRD:10428 HNRNPUL1 E1B-AP5|E1BAP5|HNRPUL1 heterogeneous nuclear ribonucleoprotein U-like 1 protein-coding 0.062130 0.546798 69(GGAGGCCGAG,+,0.00),773(GGCGGCCGCG,+,0.00) 355(ATGCGTCT,+,0.00),654(AGCCGATT,-,0.00) -54(TCGATGCC,+,0.00) 677(GCGGTCGG,-,0.00) 29(GCCGGGCG,+,0.00) 138(CGTCTCTA,+,0.00) 235(GGGAGGCGGAGG,+,0.00),705(GGGAGGGGAAGG,+,0.00) 33(GGCGCGGT,-,0.00) 75(CGAGGCGG,+,0.00),197(CTACTCGG,+,0.00),614(CTTGTCGG,+,0.00) 167(GGGCATGGTGGC,-,0.00) 561_WT_peak_494 chr1 149811989 149812600 + 116 NA TTS (NM_021059) TTS (NM_021059) 471 NM_021059 126961 Hs.647745 NM_021059 HIST2H3C H3|H3.2|H3/M|H3F2|H3FM|H3FN histone cluster 2, H3c protein-coding 0.098200 0.665033 232(GGCGTGGA,-,0.00) 357(CGCGTACC,+,0.00) 147(CCGGCCGA,+,0.00) -149(CCCCCGCC,-,0.00) 84(CAGCTTCTTCCA,-,0.00) 413(TAGCGCCG,-,0.00) 11(CCGTTTTG,-,0.00) 21(GGGAGCCTAAGC,+,0.00) -157(CCCCGGCCCCCC,-,0.00) -146(CCGCCACG,-,0.00) -13(GCACCGCAGC,-,0.00) 561_WT_peak_3297 chr17 61926113 61926431 + 116 NA Intergenic CpG -5921 NM_001098426 6603 Hs.250581 NM_003077 HPRD:03439 SMARCD2 BAF60B|CRACD2|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 protein-coding 0.072327 0.551724 39(GTGTCCGGGCCG,-,0.00) -3(CGTGGCTTCGCG,-,0.00) -17(GTCCAAGGCGGG,-,0.00) 25(GCGGGCCGGCTC,+,0.00) 561_WT_peak_5039 chr3 25824613 25824857 + 116 NA intron (NM_001145294, intron 1 of 11) CpG 254 NM_018297 55768 Hs.368960 NM_018297 HPRD:10118 NGLY1 CDG1V|PNG1|PNGase N-glycanase 1 protein-coding 0.077869 0.685714 59(CCGGGGACGCCG,-,0.00) -134(GGCGTCGC,-,0.00) -50(CCGTCCGA,+,0.00) -132(CGTCGCTG,+,0.00) -49(CGTCCGAC,+,0.00),-48(GTCCGACC,-,0.00) -133(GCGTCGCTGC,-,0.00) 561_WT_peak_630 chr1 174128666 174129131 + 116 NA promoter-TSS (NR_121197) promoter-TSS (NR_121197) 346 NM_014857 9910 Hs.585378 NM_014857 HPRD:16464 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1-like protein-coding 0.111828 0.733906 -164(CCGCCCTCCTCG,+,0.00),-102(GGTGGAGGGTGG,-,0.00),147(TCGGCCGCCTCC,+,0.00) -123(CGGCCCGGCTTC,+,0.00),0(CGGCCCGGCGGC,+,0.00),8(CGGCCCGGATCC,+,0.00) 146(GTCGGCCGCC,-,0.00) 237(TAGTGGCT,+,0.00) 46(GGCGTCGG,-,0.00),212(TCGGCGCC,+,0.00) 79(GGGCCCCAGCCG,+,0.00) 184(CCGCTCCTCGCG,-,0.00) 48(CGTCGGGC,+,0.00) 206(GCGGGGTCGGCG,+,0.00) -51(CGCGGAGACGTG,+,0.00),11(CCCGGATCCGCG,+,0.00),11(CCCGGATCCGCG,-,0.00) 130(GGGCGGGTTC,+,0.00),204(GGGCGGGGTC,+,0.00) -124(CCGGCCCGGCTT,+,0.00),-1(GCGGCCCGGCGG,+,0.00),30(GCTGCCTGGGTG,+,0.00) 561_WT_peak_3682 chr19 18654796 18655129 + 116 NA promoter-TSS (NM_012181) promoter-TSS (NM_012181) -579 NM_012181 23770 Hs.173464 NM_012181 HPRD:05327 FKBP8 FKBP38|FKBPr38 FK506 binding protein 8, 38kDa protein-coding 0.021021 0.541916 91(GGGAAGAAGGTG,+,0.00) -68(CCCTCCCATCCC,+,0.00) 1(GCTGCGCA,+,0.00) 561_WT_peak_183 chr1 36929748 36930192 + 116 NA promoter-TSS (NM_031280) promoter-TSS (NM_031280) 70 NM_031280 64960 Hs.352839 NM_031280 HPRD:11372 MRPS15 MPR-S15|RPMS15|S15mt mitochondrial ribosomal protein S15 protein-coding 0.099099 0.631461 -5(CGCGGCCGCC,-,0.00) 162(CCGGGTTCCCGC,+,0.00) -117(CGCCCGGC,-,0.00) 15(CGGCACGG,-,0.00),183(TCGGGCCG,+,0.00) 79(CAATACCG,+,0.00) -19(CGCGGGGCCCGC,-,0.00),-18(GCGGGGCCCGCG,+,0.00) 146(GGGCGGAGCT,+,0.00) 39(GCCGCCATGCTG,+,0.00) 561_WT_peak_5695 chr5 39074222 39074467 + 116 NA intron (NM_001285439, intron 1 of 38) CpG-20643 166 NM_001285440 253260 Hs.407926 NM_152756 HPRD:10682 RICTOR AVO3|PIA|hAVO3 RPTOR independent companion of MTOR, complex 2 protein-coding 0.093878 0.703252 -130(CCGCCCTGCGCG,+,0.00) 47(CGTACTCG,-,0.00) 8(GCCGGGCG,+,0.00) -67(CCCTGGCTCCGG,-,0.00) 561_WT_peak_7112-2 chr8 110552750 110552863 + 116 NA promoter-TSS (NM_001278938) promoter-TSS (NM_001278938) -49 NM_001278938 9166 Hs.409368 NM_004215 HPRD:05775 EBAG9 EB9|PDAF estrogen receptor binding site associated, antigen, 9 protein-coding 0.035398 0.517544 561_WT_peak_5122 chr3 52312469 52312774 + 116 NA promoter-TSS (NM_025222) promoter-TSS (NM_025222) 38 NM_025222 80335 Hs.194110 NM_025222 HPRD:15183 WDR82 MST107|MSTP107|PRO2730|PRO34047|SWD2|TMEM113|WDR82A WD repeat domain 82 protein-coding 0.131148 0.715686 -41(AGCCACCT,-,0.00) -143(GCGGGAAGTCGG,-,0.00),60(CCGGGAAAGGGG,-,0.00),96(GCGGGGAGGCGG,-,0.00) -59(CCGACCGT,+,0.00) -110(CCTCTTCTTCCT,-,0.00) -159(GCCGCGCC,+,0.00) -159(GCCGCGCCGGCG,+,0.00) 119(CAGCGCGGCCGC,-,0.00) 561_WT_peak_4222 chr2 97303981 97304305 + 116 NA promoter-TSS (NM_001115016) promoter-TSS (NM_001115016) -27 NR_047654 55683 Hs.516341 NM_017991 HPRD:07643 KANSL3 KIAA1310|NSL3|Rcd1 KAT8 regulatory NSL complex subunit 3 protein-coding 0.126543 0.661538 -147(TCGAAGCC,+,0.00),-62(TCCACGCC,+,0.00) -80(CGCGTGCG,+,0.00),-78(CGTGCGCG,-,0.00) 83(GTCCGAAG,-,0.00) -38(CGAGTAAA,+,0.00) -101(GGCCACGGCCGG,-,0.00) 11(GCGGCAAAGC,+,0.00) 561_WT_peak_1684 chr12 49524752 49525157 + 116 NA intron (NM_006082, intron 1 of 3) CpG 350 NM_006082 10376 Hs.524390 NM_006082 HPRD:03960 TUBA1B K-ALPHA-1 tubulin, alpha 1b protein-coding 0.086420 0.650246 -28(CTTTCCGGGCCC,-,0.00),205(GACACCGGGTCC,-,0.00) 167(TAGTGGCT,+,0.00) 143(GGGAGCCGCACG,+,0.00),182(AGGAGGCGAAGG,+,0.00) -56(CCGAGAAG,-,0.00),229(CCGACAAG,-,0.00) 16(CCCGCCCTGGCC,+,0.00) 561_WT_peak_3422 chr18 3624904 3625143 + 116 NA intron (NM_001242764, intron 4 of 9) intron (NM_001242764, intron 4 of 9) 21288 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA 0.020921 0.508333 66(GCTTCACAGC,-,0.00) 561_WT_peak_6772 chr7 99775308 99775569 + 116 NA promoter-TSS (NM_012447) promoter-TSS (NM_012447) 72 NM_001282718 10734 Hs.592283 NM_012447 HPRD:10253 STAG3 - stromal antigen 3 protein-coding 0.103448 0.664122 -139(GGGCGGGGCT,+,0.00),-129(AAAGCGGGCC,-,0.00) -59(GCTGTGGAGC,+,0.00) 561_WT_peak_1393 chr11 67980619 67980794 + 116 NA promoter-TSS (NM_016028) promoter-TSS (NM_016028) 78 NM_016028 51111 Hs.632120 NM_016028 HPRD:11616 SUV420H1 CGI85|KMT5B suppressor of variegation 4-20 homolog 1 (Drosophila) protein-coding 0.120000 0.676136 -105(GCCGCCGGGCCC,-,0.00) -110(GCCGCGCC,+,0.00) -144(CCCAGGCCCCGC,-,0.00),-102(GCCGGGCCCCGC,-,0.00),-101(CCGGGCCCCGCG,+,0.00) -116(TGCGGGGCCGCG,+,0.00) -112(GGGCCGCGCC,+,0.00) -139(GCCCCGCTGC,-,0.00),-123(GCTGCGATGC,+,0.00) -133(CTGCCCGGCCGC,-,0.00),-104(CCGCCGGGCCCC,-,0.00) 561_WT_peak_6200 chr6 27125822 27126009 + 116 NA Intergenic tRNA-His-CAY_|tRNA|tRNA 10510 NR_036096 100422934 NR_036096 miRBase:MI0014167 MIR3143 - microRNA 3143 ncRNA 0.069519 0.515957 -25(GAATCCGAGTCA,-,0.00) -98(AGCGGCCT,-,0.00) -84(GCGTGCCG,+,0.00) 561_WT_peak_1734 chr12 57873538 57873941 + 116 NA promoter-TSS (NM_032496) promoter-TSS (NM_032496) -106 NM_032496 64333 Hs.437126 NM_032496 HPRD:06449 ARHGAP9 10C|RGL1 Rho GTPase activating protein 9 protein-coding 0.007444 0.450495 221(AAGCCTCT,+,0.00) 178(CGATTTTG,-,0.00) -121(GACACAGGAAGG,+,0.00),-79(GAAACAGGGAGA,+,0.00),69(GAAACAGAAAGC,+,0.00) 189(GCTGAGAAGC,+,0.00) 561_WT_peak_1944 chr13 21347482 21348025 + 116 NA intron (NM_174928, intron 1 of 4) CpG 304 NM_174928 221143 Hs.26674 NM_174928 HPRD:14135 N6AMT2 ESP13 N-6 adenine-specific DNA methyltransferase 2 (putative) protein-coding 0.081031 0.630515 241(CGGCGCCAGCTC,+,0.00) 152(CGTGCGCG,-,0.00) 137(AGGCCCGGGC,-,0.00) -53(GCCGCGGG,+,0.00) 247(CAGCTCCTTCCC,-,0.00) 230(CACTCTCAGGCC,+,0.00) 110(TTTCCCCG,-,0.00) 48(GAGTCCTGTTTC,-,0.00) 154(TGCGCGGC,-,0.00) 240(CCGGCGCCAGCT,+,0.00) -136(AAAGCCGCCC,-,0.00) 59(CTACTCGG,+,0.00) 561_WT_peak_1744 chr12 58334896 58335091 + 115 NA promoter-TSS (NM_033276) promoter-TSS (NM_033276) -452 NM_033276 91419 Hs.61188 NM_033276 HPRD:17256 XRCC6BP1 KUB3 XRCC6 binding protein 1 protein-coding 0.051282 0.622449 -16(CGAGGAGGCGGG,-,0.00) -72(CGGCACAA,-,0.00) 16(GCAGCAGGAAGC,+,0.00) 561_WT_peak_6948 chr8 23104086 23104511 + 115 NA exon (NM_152272, exon 2 of 11) exon (NM_152272, exon 2 of 11) 3148 NM_152272 91782 Hs.5019 NM_152272 HPRD:14534 CHMP7 - charged multivesicular body protein 7 protein-coding 0.087059 0.694836 30(GGAGGAGGACGA,-,0.00) -24(GGAGGCCGAG,+,0.00) -66(CAGCCTTGCCGG,+,0.00) -55(GGGCTGGGGTTC,-,0.00) -8(GCCGGGGG,+,0.00) 12(CCTTCTGCCCCC,-,0.00) 152(GCCGCCAGGGGG,+,0.00) 561_WT_peak_3744 chr19 37329076 37329292 + 115 NA promoter-TSS (NM_001242802) promoter-TSS (NM_001242802) 102 NM_206894 388536 Hs.282067 NM_206894 ZNF790 - zinc finger protein 790 protein-coding 0.078704 0.603687 -65(TCCCCTCAGCCC,+,0.00) 561_WT_peak_3021 chr17 7590739 7590985 + 115 NA promoter-TSS (NM_001143992) promoter-TSS (NM_001143992) 6 NM_001126112 7157 Hs.437460 NM_000546 HPRD:01859 TP53 BCC7|LFS1|P53|TRP53 tumor protein p53 protein-coding 0.036585 0.574899 63(GGAGGAGGGTGC,-,0.00) -30(CCTGCGAGGC,+,0.00) 561_WT_peak_7154 chr8 131054605 131054988 + 115 NA Intergenic Intergenic -25899 NR_046361 51571 Hs.126941 NM_016623 HPRD:13313 FAM49B L1 family with sequence similarity 49, member B protein-coding 0.015666 0.536458 -162(AGACACCT,-,0.00) -119(GCCTCGCAGG,-,0.00) 85(CCGGCCTGGCCC,+,0.00) 561_WT_peak_3908 chr19 56904744 56905038 + 115 NA promoter-TSS (NR_037161) promoter-TSS (NR_037161) -2 NM_144690 147948 Hs.244391 NM_144690 HPRD:15859 ZNF582 - zinc finger protein 582 protein-coding 0.108844 0.684746 -94(CCGCCTCCTCGG,+,0.00),-64(CCGCGCCCCCGG,+,0.00) 47(GGGCCGGCGCCG,-,0.00) -59(CCCCCGGC,-,0.00) -65(GCCGCGCC,+,0.00),-9(TGCGCAGC,-,0.00) 48(GGCCGGCGCCGC,-,0.00) 561_WT_peak_3689 chr19 19626687 19627175 + 115 NA promoter-TSS (NM_032037) promoter-TSS (NM_032037) -88 NM_015965 51079 Hs.534453 NM_015965 NDUFA13 B16.6|CDA016|GRIM-19|GRIM19 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 protein-coding 0.077869 0.613497 202(GGCGTCAA,-,0.00),273(CGCGTCGA,-,0.00) 61(GCGGTCGG,-,0.00) 232(GCCGGGGG,+,0.00) 99(CCGTGCCG,+,0.00) 38(GTCCGCCG,-,0.00) -156(CGGGAAAA,+,0.00) 272(CCGCGTCG,-,0.00) 11(CAGCCCGGCAGC,-,0.00) 561_WT_peak_3624 chr19 11071061 11071367 + 115 NA promoter-TSS (NM_001128849) promoter-TSS (NM_001128849) -384 NM_003072 6597 Hs.327527 NM_003072 HPRD:04459 SMARCA4 BAF190|BAF190A|BRG1|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding 0.084967 0.644951 121(CGCGGCCGCC,-,0.00) -45(AAGCGGTT,+,0.00) -68(TCGCCGCC,+,0.00) -103(ACGGTCGG,-,0.00) 20(GTCCTACG,-,0.00) -1(CGGTCTTG,-,0.00) 34(GGTTCCTATTTC,-,0.00) -100(GTCGGGCCCCGC,-,0.00) -71(GCCTCGCCGC,-,0.00) 561_WT_peak_1871 chr12 116997064 116997864 + 115 NA intron (NM_001085481, intron 1 of 1) intron (NM_001085481, intron 1 of 1) 278 NM_001085481 643246 Hs.506947 NM_001085481 ENSG00000171471 MAP1LC3B2 ATG8G microtubule-associated protein 1 light chain 3 beta 2 protein-coding 0.025000 0.531835 411(GGAGGAGGAGGG,-,0.00) -31(AGCCACCT,-,0.00) -162(CAGCGACG,-,0.00) 27(GCCTCCCAGCCC,+,0.00) 488(CAGTTTTG,-,0.00) -38(GGCTCGCAGC,-,0.00),27(GCCTCCCAGC,-,0.00) 249(CAGCCAGGCTGG,-,0.00) 561_WT_peak_757 chr1 226595436 226595897 + 115 NA 5' UTR (NM_001618, exon 1 of 23) 5' UTR (NM_001618, exon 1 of 23) 135 NM_001618 142 Hs.177766 NM_001618 HPRD:01435 PARP1 ADPRT|ADPRT 1|ADPRT1|ARTD1|PARP|PARP-1|PPOL|pADPRT-1 poly (ADP-ribose) polymerase 1 protein-coding 0.136659 0.725108 24(CCGCCATCCTCC,+,0.00) 143(AGCCGCCA,-,0.00) -158(CAGCCTTCCCGG,+,0.00),-127(CCGCGTCCCCGC,+,0.00),225(CCGCGTCCACGG,+,0.00) 63(CCGACGCC,+,0.00),95(TCGCCGCC,+,0.00) -9(CGTACTCG,-,0.00),104(CGCGTGCG,+,0.00) 203(GCCGCGGG,+,0.00),269(GCCGGGGG,+,0.00) 67(CGCCACGA,-,0.00) 61(GCCCGACG,-,0.00) -140(TTAACCCG,-,0.00) 238(GCGGGGCCGGCG,+,0.00),247(GCGGCGCGCGCG,+,0.00) -134(CGGGGCGCCGCG,+,0.00),-134(CGGGGCGCCGCG,-,0.00) -103(ACAGCGGCCC,-,0.00),275(GGGCGGAGTT,+,0.00) 90(CCGCCTCG,-,0.00),98(CCGCCTCG,-,0.00) -117(GCCCCGCCGC,-,0.00),92(GCCTCGCCGC,-,0.00) 561_WT_peak_7071 chr8 96037137 96037488 + 115 NA promoter-TSS (NM_152416) promoter-TSS (NM_152416) 98 NM_152416 137682 Hs.729144 NM_152416 HPRD:17553 NDUFAF6 C8orf38 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 protein-coding 0.128205 0.755682 54(AGGTGTCT,+,0.00) -93(GGGGTCGA,-,0.00) -53(CGCGCACG,+,0.00),21(TGTACGCG,-,0.00) -98(GGCGGGGG,+,0.00) -94(GGGGGTCGAAGG,+,0.00) -55(TCCGCGCA,+,0.00),155(GGCGCGGC,-,0.00) 151(CCCTGGCGCGGC,-,0.00) -70(GGCGTCATGGCG,+,0.00),-68(CGTCATGGCGGC,-,0.00) 561_WT_peak_7576 chrX 70752464 70752472 + 115 NA promoter-TSS (NM_181672) promoter-TSS (NM_181672) -444 NM_181673 8473 Hs.405410 NM_003605 HPRD:02222 OGT HRNT1|O-GLCNAC O-linked N-acetylglucosamine (GlcNAc) transferase protein-coding 0.000000 0.444444 561_WT_peak_197 chr1 40840377 40840556 + 115 NA intron (NM_001198978, intron 1 of 9) intron (NM_001198978, intron 1 of 9) 161 NM_001198978 64744 Hs.15200 NM_022733 HPRD:12442 SMAP2 SMAP1L small ArfGAP2 protein-coding 0.005587 0.461111 561_WT_peak_6995 chr8 42011282 42011448 + 115 NA intron (NM_006803, intron 1 of 8) intron (NM_006803, intron 1 of 8) 901 NM_006803 10947 Hs.654529 NM_006803 HPRD:09801 AP3M2 AP47B|CLA20|P47B adaptor-related protein complex 3, mu 2 subunit protein-coding 0.006024 0.473054 -11(GAAATAGAAAGC,+,0.00) -49(GGGCAGCTTT,+,0.00) 561_WT_peak_5925 chr5 134073987 134074214 + 115 NA promoter-TSS (NM_001745) promoter-TSS (NM_001745) -70 NM_001745 819 Hs.529846 NM_001745 HPRD:03073 CAMLG CAML calcium modulating ligand protein-coding 0.074890 0.671053 -63(GGCGTCCA,-,0.00) -153(TCCCGGCCCT,+,0.00) -72(AGGCACGA,-,0.00) 42(GGGCGGGTCT,+,0.00) 561_WT_peak_5090 chr3 47029326 47029584 + 115 NA intron (NM_015175, intron 1 of 53) intron (NM_015175, intron 1 of 53) -5955 NM_144716 151903 Hs.631918 NM_144716 HPRD:13007 CCDC12 - coiled-coil domain containing 12 protein-coding 0.042636 0.683398 -79(TCCCCCTCCCCC,+,0.00) -159(AGGTCGCT,+,0.00) -49(CTGCCCCAGCCC,+,0.00) -91(GGGAGGAAGCGG,+,0.00) -122(CCCCGGCCCCCC,-,0.00) 561_WT_peak_5105 chr3 49066645 49066878 + 115 NA TTS (NM_017730) TTS (NM_017730) 114 NM_000884 3615 Hs.654400 NM_000884 HPRD:00895 IMPDH2 IMPD2|IMPDH-II IMP (inosine 5'-monophosphate) dehydrogenase 2 protein-coding 0.094421 0.641026 56(AGCCGATT,-,0.00) -77(GTCCGTCG,-,0.00),-62(CGTAGGAC,+,0.00) 9(ACCGCGCC,+,0.00),38(GCCGCGCC,+,0.00) 36(GGGCCGCGCC,+,0.00) -33(TCGGCCATGGCC,+,0.00) 561_WT_peak_2502 chr15 60690000 60690322 + 115 NA promoter-TSS (NM_001136015) promoter-TSS (NM_001136015) 24 NM_001002858 302 Hs.511605 NM_004039 HPRD:01061 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding 0.096273 0.746130 -136(GCCTCCGGGGCC,-,0.00) -6(GAGCTGAGAGCG,-,0.00) 49(TATACCCG,-,0.00) -159(CCTTCAGCCCCC,-,0.00) -38(GGCGCGCCCCGC,-,0.00),81(GGCCCGCCCCGC,-,0.00) -57(GCCCATCGCGGG,-,0.00) -117(GGGGCCTCCCTG,+,0.00),-108(CTGCCAGGCCGT,-,0.00) 561_WT_peak_1069 chr10 79793637 79793829 + 115 NA intron (NM_033022, intron 1 of 5) CpG 215 NM_033022 6229 Hs.280130 NM_001026 HPRD:03877 RPS24 DBA3|S24 ribosomal protein S24 protein-coding 0.072917 0.616580 561_WT_peak_858 chr10 5726325 5726532 + 115 NA promoter-TSS (NM_017782) promoter-TSS (NM_017782) -373 NM_017782 54906 Hs.610717 NM_017782 ENSG00000108021 FAM208B C10orf18|bA318E3.2 family with sequence similarity 208, member B protein-coding 0.048309 0.543269 -104(GCATTCGGGCCA,-,0.00) 29(CCGCCTCTTCCC,-,0.00) 561_WT_peak_622 chr1 172616128 172616374 + 115 NA Intergenic Intergenic -11934 NM_000639 356 Hs.2007 NM_000639 HPRD:00610 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6 Fas ligand (TNF superfamily, member 6) protein-coding 0.012195 0.518219 -13(CAGACAGGAAGC,+,0.00) 561_WT_peak_6244 chr6 28891084 28891699 + 115 NA exon (NM_006510, exon 1 of 8).3 exon (NM_006510, exon 1 of 8).3 377 NM_006510 5987 Hs.440382 NM_006510 HPRD:15996 TRIM27 RFP|RNF76 tripartite motif containing 27 protein-coding 0.110569 0.707792 -111(GCCGCCGGGCCC,-,0.00),236(CTCTCCGGTTCG,-,0.00) 264(CCGGGCGGACGG,-,0.00),282(GCGCCTCCCGGG,+,0.00) -113(TCGCCGCC,+,0.00),198(GGCGCCGA,-,0.00) -11(TCCCGGCACT,+,0.00) 1(GGGCACGA,-,0.00) -74(TTTACCAG,-,0.00) 428(GGTAGCCGAGGG,+,0.00) -85(TGCGCAGC,-,0.00),311(CCCGCGCA,+,0.00) 277(GGGCGGCGCC,+,0.00) 154(GAGGCCATGGCG,+,0.00),156(GGCCATGGCGCC,-,0.00) -110(CCGCCGGGCCCC,-,0.00) 561_WT_peak_5978 chr5 147763143 147763690 + 115 NA promoter-TSS (NM_030793) promoter-TSS (NM_030793) -3 NR_105057 102546294 Hs.660461 NR_105057 LOC102546294 - uncharacterized LOC102546294 ncRNA 0.065814 0.571168 303(GGCGGCTGAG,+,0.00) -75(AGAGACTT,-,0.00),239(AAGTGTCT,+,0.00) 325(CCGGGAGCGGGG,-,0.00) 201(CGGCGGAAGCGG,+,0.00) 258(CCCTCTCAACCA,+,0.00),305(CGGCTGAGTGGG,-,0.00) -10(TTCCGACG,-,0.00) 149(CGGGTTTG,-,0.00) 561_WT_peak_3296 chr17 61920022 61920228 + 115 NA 5' UTR (NM_001098426, exon 1 of 13) 5' UTR (NM_001098426, exon 1 of 13) 226 NM_001098426 6603 Hs.250581 NM_003077 HPRD:03439 SMARCD2 BAF60B|CRACD2|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 protein-coding 0.140777 0.647343 -162(CGGCCCGACATC,+,0.00),-119(GACTCCGGGCTC,-,0.00) -107(CGCGTCGA,-,0.00) -162(CGGCCCGA,-,0.00) -136(CGCGGTGCCGCG,+,0.00),-136(CGCGGTGCCGCG,-,0.00),-115(CCGGGCTCCGCG,-,0.00) -108(CCGCGTCG,-,0.00) 561_WT_peak_3542 chr19 246882 247348 + 115 NA Intergenic TAR1|Satellite|telo 44054 NM_177543 8612 Hs.465506 NM_003712 HPRD:06180 PPAP2C LPP2|PAP-2c|PAP2-g phosphatidic acid phosphatase type 2C protein-coding 0.042918 0.653105 -31(CGGCACGC,-,0.00) 561_WT_peak_4353 chr2 166810229 166810837 + 115 NA promoter-TSS (NM_024753) promoter-TSS (NM_024753) -185 NM_024753 79809 Hs.310672 NM_024753 HPRD:07752 TTC21B ATD4|IFT139|JBTS11|NPHP12|SRTD4|THM1 tetratricopeptide repeat domain 21B protein-coding 0.080592 0.620690 129(AAACGGCT,+,0.00) -160(GCCGCGGG,+,0.00) -48(TCGCGCCG,+,0.00),2(TCGTGCTG,+,0.00) -62(CGGGAGGGGCGG,+,0.00),314(GGGAAAAAGCGG,+,0.00) 44(GGGCTGCGAGGG,-,0.00) 313(CGGGAAAA,+,0.00) 29(GGGACCCGGAGG,+,0.00) -56(GGGCGGGGTC,+,0.00) -160(GCCGCGGGGC,+,0.00),46(GCTGCGAGGG,+,0.00) 561_WT_peak_1391 chr11 67381395 67381846 + 115 NA intron (NR_033791, intron 4 of 4) intron (NR_033791, intron 4 of 4) 1515 NR_033791 390213 Hs.523838 NR_033791 DOC2GP - double C2-like domains, gamma, pseudogene pseudo 0.033259 0.612832 -159(AAGCGGCT,+,0.00),204(AGCCACTT,-,0.00) -6(CCGGGGAGGATG,-,0.00) 155(GGGCTGGCGCTG,-,0.00) -111(CAAAACCC,+,0.00) 561_WT_peak_6453 chr6 117996293 117996854 + 115 NA promoter-TSS (NM_138459) promoter-TSS (NM_138459) -44 NM_138459 116150 Hs.289008 NM_138459 HPRD:12894 NUS1 C6orf68|MGC:7199|NgBR|TANGO14 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) protein-coding 0.094474 0.653025 28(TCGCCCTCCACG,+,0.00) -63(GACGCCGGGTCC,-,0.00) -112(TCTGTCGG,-,0.00) 217(GGCGGGGG,+,0.00),267(GGCGGGGG,+,0.00) 309(CGGATAAA,+,0.00) 111(GGGCCACGTT,+,0.00),185(GGGCGGGGCT,+,0.00) 561_WT_peak_2525 chr15 67383705 67383944 + 115 NA intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) 25629 NM_005902 4088 Hs.727986 NM_005902 HPRD:04380 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding 0.025105 0.470833 -133(CGGTGTTG,-,0.00) 561_WT_peak_7576-2 chrX 70752517 70753063 + 115 NA promoter-TSS (NM_181672) promoter-TSS (NM_181672) -122 NM_181673 8473 Hs.405410 NM_003605 HPRD:02222 OGT HRNT1|O-GLCNAC O-linked N-acetylglucosamine (GlcNAc) transferase protein-coding 0.075092 0.526508 -106(AGACGCCT,-,0.00) -107(TAGACGCC,+,0.00),265(TCGCCGCC,+,0.00) 66(GGGTTGACAGGG,-,0.00) -140(CGTTTTTG,-,0.00),-34(CAAAAACG,+,0.00),277(CAAGACCG,+,0.00) -3(TTTACCCT,-,0.00) 87(TGCGCGGT,-,0.00),125(TGCGCGGA,-,0.00) 60(CGAGTCGG,+,0.00) 561_WT_peak_6170 chr6 26327747 26327971 + 115 NA Intergenic tRNA-Ser-TCY|tRNA|tRNA -37528 NM_001197249 11118 Hs.376046 NM_007047 HPRD:12547 BTN3A2 BT3.2|BTF4|BTN3.2|CD277 butyrophilin, subfamily 3, member A2 protein-coding 0.058036 0.448889 22(CCGACCGA,+,0.00),26(CCGATCGA,+,0.00) -26(TCCTGCCG,+,0.00) 41(CGTGTAAA,+,0.00) -42(CCCGCGCA,+,0.00) 561_WT_peak_2492 chr15 55700376 55700835 + 115 NA promoter-TSS (NM_001198784) promoter-TSS (NM_001198784) -31 NM_004748 9236 Hs.285051 NM_004748 HPRD:09895 CCPG1 CPR8 cell cycle progression 1 protein-coding 0.089325 0.643478 -60(CTCGGGCGCC,-,0.00) -18(AGGCGTCT,+,0.00) -157(CCCCCTCCCGGG,+,0.00),55(CCTCCTGCCCGG,+,0.00) -101(CCGCCCGA,+,0.00) 116(GCCGGGCG,+,0.00) 234(TTCACCCG,-,0.00),240(CGGGAAAA,+,0.00) 134(GCTGGGCCAGGC,+,0.00) -137(CCGCCTAG,-,0.00) 561_WT_peak_3729 chr19 36208363 36208588 + 115 NA promoter-TSS (NM_014727) promoter-TSS (NM_014727) -446 NM_014727 9757 Hs.92236 NM_014727 HPRD:06017 KMT2B HRX2|MLL1B|MLL2|MLL4|TRX2|WBP-7|WBP7 lysine (K)-specific methyltransferase 2B protein-coding 0.080000 0.699115 24(AGACCCGGCAAC,+,0.00),39(CTTTCCGGGTCC,-,0.00) 36(CCGCTTTCCGGG,+,0.00) -67(CCCGCGGC,-,0.00) -79(CCGGGGCCCGAG,+,0.00) -41(CACGCGGGCCGC,-,0.00),45(GGGTCCTGGCCG,+,0.00) 561_WT_peak_3348 chr17 73975630 73975863 + 115 NA promoter-TSS (NM_004035) promoter-TSS (NM_004035) -231 NM_001185039 51 Hs.464137 NM_004035 HPRD:02030 ACOX1 ACOX|PALMCOX|SCOX acyl-CoA oxidase 1, palmitoyl protein-coding 0.051502 0.619658 -108(GCTTCCGGGTCC,-,0.00) -88(AGGCCTCT,+,0.00) -125(CCCGCGGC,-,0.00) -42(CGGGAGATGGGG,+,0.00) -134(CCCTCTTACCCC,+,0.00) 561_WT_peak_5219 chr3 119187589 119188028 + 115 NA promoter-TSS (NM_152305) promoter-TSS (NM_152305) 23 NR_024265 56983 Hs.231750 NM_152305 HPRD:17475 POGLUT1 C3orf9|CLP46|KDELCL1|KTELC1|MDSRP|Rumi|hCLP46 protein O-glucosyltransferase 1 protein-coding 0.079727 0.686364 40(GCTCCCGGGCCA,-,0.00),244(CTGGCCGGAGTC,+,0.00) -121(CAGGGAGGGAGG,-,0.00),-79(CCACCTTCCCGG,+,0.00) 34(GCTGCGGCTCCC,-,0.00) 23(GCCGCCCA,+,0.00) 58(TGCGGGGCCGCG,+,0.00) 62(GGGCCGCGCT,+,0.00) -10(GGCCACGGTGGC,-,0.00) 79(GCGCCGCAGC,-,0.00),263(GCTCCCCCGC,-,0.00) 561_WT_peak_2384 chr14 103851767 103852163 + 115 NA 5' UTR (NM_001128919, exon 1 of 17) 5' UTR (NM_001128919, exon 1 of 17) 264 NM_001128920 4140 Hs.35828 NM_002376 HPRD:04058 MARK3 CTAK1|KP78|PAR1A|Par-1a MAP/microtubule affinity-regulating kinase 3 protein-coding 0.128788 0.750630 -124(GGCGGAGGCTGA,-,0.00),12(TCCGCCTCCTCG,+,0.00) 219(CTCGGCCGCC,-,0.00),222(GGCCGCCGAG,+,0.00) 198(CCGCCCTCCCGG,+,0.00) -44(TCGGCGCC,+,0.00) -31(CCCGCGGC,-,0.00) -93(AGGGAGAAGCAG,+,0.00) 77(GTGCGACG,-,0.00) -147(GCGGCGGCAGCG,+,0.00),31(GCGCCGCCGGCG,+,0.00),35(CGCCGGCGGCGC,-,0.00) 182(CTCGGCTCCGCC,-,0.00) -65(CCTCCGCAGC,-,0.00) -25(GCGGCCTGTCTT,+,0.00) 561_WT_peak_6869 chr7 139045384 139045795 + 115 NA intron (NM_016019, intron 1 of 9) intron (NM_016019, intron 1 of 9) 997 NM_001270643 51631 Hs.731488 NM_016019 HPRD:17456 LUC7L2 CGI-74|LUC7B2 LUC7-like 2 (S. cerevisiae) protein-coding 0.024331 0.458738 -75(CCGCCGTCCTCC,+,0.00),-43(TCCCCCTCCTCT,+,0.00) 167(AGAGGCTT,-,0.00) -78(TCGCCGCC,+,0.00) 217(CGATTTTG,-,0.00) 561_WT_peak_7191 chr8 145747882 145748199 + 115 NA exon (NM_001024678, exon 5 of 5) exon (NM_001024678, exon 5 of 5) 4376 NM_001024678 441381 Hs.740859 NM_001024678 HPRD:18651 LRRC24 LRRC14OS leucine rich repeat containing 24 protein-coding 0.145110 0.720126 -81(AGCGGCTT,-,0.00) 107(GAGCGCCAGCAG,+,0.00) -145(TCCCGGCCCC,+,0.00) -162(GGCGGGGG,+,0.00) -100(CGCCGGAC,+,0.00) -145(TCCCGGCCCCGC,-,0.00),65(GCGGCGCCGGCG,+,0.00) -152(CGCGGAGTCCCG,+,0.00) -38(CGTCGCGG,+,0.00) 129(GCCGCAATGGCC,+,0.00) 561_WT_peak_7022 chr8 54934750 54934920 + 115 NA non-coding (NR_109901, exon 1 of 12) non-coding (NR_109901, exon 1 of 12) 181 NM_201437 6917 Hs.491745 NM_006756 HPRD:03252 TCEA1 GTF2S|SII|TCEA|TF2S|TFIIS transcription elongation factor A (SII), 1 protein-coding 0.152941 0.754386 -44(CCTCCTCCCCAG,+,0.00) -116(AGGCCCGGGC,-,0.00),-114(GCCCGGGCCT,+,0.00) -146(CCCCCGGC,-,0.00),-80(CCCGCGGC,-,0.00) -77(GCGGCGGCGGCG,+,0.00),-74(GCGGCGGCGGCG,+,0.00),-71(GCGGCGGCGGCG,+,0.00),-68(GCGGCGGCGGCG,+,0.00),-65(GCGGCGGCGGCG,+,0.00) 561_WT_peak_4284 chr2 122513167 122513470 + 115 NA non-coding (NR_048559, exon 1 of 4) non-coding (NR_048559, exon 1 of 4) 197 NR_048557 7247 Hs.75066 NM_004622 HPRD:08993 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding 0.108911 0.671053 -21(CTTGGCCGCC,-,0.00),66(GGCTGCCGAG,+,0.00) -33(GGCGTCCA,-,0.00) -102(TCGTGGCG,+,0.00) -111(TAGCGACG,-,0.00),-72(TAGCGGCG,-,0.00) -157(CGGCGGAC,+,0.00) 19(GGCGCCATGTCT,+,0.00) 67(GCTGCCGAGC,+,0.00) 561_WT_peak_7195 chr8 146277883 146278078 + 115 NA exon (NM_023080, exon 2 of 5) exon (NM_023080, exon 2 of 5) 156 NM_023080 65265 Hs.169615 NM_023080 HPRD:07951 C8orf33 - chromosome 8 open reading frame 33 protein-coding 0.092308 0.714286 -117(TGGCGGCT,+,0.00) -4(CCGGCTTCCCGG,+,0.00) -80(TCCAGGCCCT,+,0.00),2(TCCCGGCCCA,+,0.00) -12(CGCGGAGCCCGG,+,0.00) -1(GCTTCCCGGC,-,0.00) 561_WT_peak_4846 chr22 21356189 21356445 + 115 NA promoter-TSS (NM_001008695) promoter-TSS (NM_001008695) 87 NM_001008695 80764 Hs.512756 NM_030573 HPRD:15500 THAP7 - THAP domain containing 7 protein-coding 0.109375 0.684825 -125(AAGCGGCT,+,0.00),-13(AGCCGATT,-,0.00) -45(CCCCCGGC,-,0.00) -81(CCGCTCCTCCCC,-,0.00) 34(GCTGCGCCGC,+,0.00),34(GCTGCGCCGC,-,0.00) 561_WT_peak_3143 chr17 36857988 36858517 + 115 NA TTS (NR_039887) TTS (NR_039887) 332 NR_039887 100616203 NR_039887 miRBase:MI0017371 MIR4734 - microRNA 4734 ncRNA 0.064272 0.605660 350(AGCCGCCT,-,0.00) 287(CAGCCTCCCCCG,+,0.00) 155(GGCGTCGG,-,0.00) -46(GGGCTGGGACTC,-,0.00) 251(CCGGTCGG,-,0.00) -47(AGGGCTGGGA,-,0.00) 165(CAGCCTCTTCCC,-,0.00) 326(CTTCGCGG,+,0.00),352(CCGCCTAG,-,0.00) 561_WT_peak_3680 chr19 18391945 18392294 + 115 NA promoter-TSS (NR_036155) promoter-TSS (NR_036155) 347 NM_005354 3727 Hs.2780 NM_005354 HPRD:01304 JUND AP-1 jun D proto-oncogene protein-coding 0.126074 0.742857 145(AGGCCGCT,+,0.00) 101(CCGGGGACGCGA,-,0.00) 88(GGGAACAAGCGG,+,0.00) -148(CGTTGGAC,+,0.00) -17(GGCGCGGC,-,0.00),138(GCCGCCCA,+,0.00) 128(CACTGGCGCCGC,-,0.00) 93(CAAGCGGCCC,-,0.00) 138(GCCGCCCAGGCC,+,0.00) 133(GCGCCGCCGC,-,0.00) 140(CGCCCAGGCCGC,-,0.00) 561_WT_peak_7184 chr8 144911307 144911586 + 115 NA promoter-TSS (NM_001271100) promoter-TSS (NM_001271100) 110 NM_078480 22827 Hs.521924 NM_014281 HPRD:18051 PUF60 FIR|RoBPI|SIAHBP1|VRJS poly-U binding splicing factor 60KDa protein-coding 0.146953 0.717857 -79(TCGACGAC,+,0.00) -6(CGTCGCCA,+,0.00) 8(GTCCGTCG,-,0.00) -73(ACCCGGCCCCGC,-,0.00) -74(GACCCGGCCC,-,0.00) 11(CGTCGCGG,+,0.00) -93(GCGCCCAGGCTG,+,0.00) 561_WT_peak_6995-2 chr8 42011716 42011789 + 115 NA intron (NM_006803, intron 1 of 8) intron (NM_006803, intron 1 of 8) 1288 NM_006803 10947 Hs.654529 NM_006803 HPRD:09801 AP3M2 AP47B|CLA20|P47B adaptor-related protein complex 3, mu 2 subunit protein-coding 0.013699 0.445946 -163(GCTGCGCA,+,0.00) 561_WT_peak_2833 chr16 46654981 46655262 + 115 NA intron (NM_024745, intron 1 of 12) CpG 190 NM_024745 79801 Hs.123253 NM_024745 HPRD:11557 SHCBP1 PAL SHC SH2-domain binding protein 1 protein-coding 0.106762 0.744681 -10(AGGCGGCT,+,0.00) -34(CCGACGCC,+,0.00) -143(CCGCCCGA,+,0.00) -109(GCCGCGCA,+,0.00),53(ACCGCCCA,+,0.00) -9(GGCGGCTCCTCG,-,0.00) 74(GGCGCCATGGCC,+,0.00),76(CGCCATGGCCGC,-,0.00) 561_WT_peak_1343 chr11 64889755 64889992 + 115 NA promoter-TSS (NM_001997) promoter-TSS (NM_001997) 157 NR_037568 740 Hs.744882 NM_004927 HPRD:06037 MRPL49 C11orf4|L49mt|MRP-L49|NOF|NOF1 mitochondrial ribosomal protein L49 protein-coding 0.080169 0.617647 -61(AGAACCGGTGTC,+,0.00) -109(CAGGTAAA,+,0.00) 561_WT_peak_2872 chr16 67867602 67868010 + 114 NA 5' UTR (NM_025082, exon 4 of 16) 5' UTR (NM_025082, exon 4 of 16) -8407 NM_020457 57215 Hs.632200 NM_020457 HPRD:11629 THAP11 CTG-B43a|CTG-B45d|RONIN THAP domain containing 11 protein-coding 0.090686 0.633252 42(CCGCCTTCCCGC,+,0.00) -38(GGCGTGGA,-,0.00) -45(CGTGCGCG,-,0.00) -91(GCCGCGGG,+,0.00) 84(CCCGCACAGCCC,+,0.00) 185(CGGGTAAA,+,0.00) -82(TGCGCGGG,-,0.00),-43(TGCGCGGC,-,0.00),20(ACCGCCCA,+,0.00) -80(CGCGGGTCCGCT,-,0.00) -3(CGTCTCGG,+,0.00) -57(GCGTCGCAGC,-,0.00),176(GCCTCGCTGC,-,0.00) 173(GCAGCCTCGCTG,+,0.00) 561_WT_peak_6229 chr6 27839887 27840405 + 114 NA promoter-TSS (NM_003533) promoter-TSS (NM_003533) -47 NM_003533 8354 Hs.132854 NM_003533 HPRD:11908 HIST1H3I H3.f|H3/f|H3FF histone cluster 1, H3i protein-coding 0.063707 0.504817 -35(AGCCGCCT,-,0.00) -67(TTGACGCC,+,0.00) -136(TCGGTCGA,-,0.00) 34(TCGTGCCA,+,0.00) -121(TAGCGGCG,-,0.00) 211(CTGTTTTG,-,0.00),236(TGGTTTTG,-,0.00),259(CAAAAACG,+,0.00) -12(TGCGCGGC,-,0.00) -34(GCCGCCTTGGTG,+,0.00) -4(GCTTTGCCGC,-,0.00) 561_WT_peak_6876 chr7 142506455 142506927 + 114 NA Intergenic Intergenic 26783 NM_002770 5645 Hs.449281 NM_002770 PRSS2 TRY2|TRY8|TRYP2 protease, serine, 2 (trypsin 2) protein-coding 0.008475 0.536998 -23(AGCCACCT,-,0.00) -70(GCTGCCGGGCTG,+,0.00) 561_WT_peak_3387 chr17 79632736 79633298 + 114 NA promoter-TSS (NM_199287) promoter-TSS (NM_199287) 601 NM_001039842 339229 Hs.405942 NM_001039842 ENSG00000204237 OXLD1 C17orf90 oxidoreductase-like domain containing 1 protein-coding 0.032028 0.564831 176(AGGCCTCT,+,0.00) 1(TCGACACC,+,0.00) -51(GGCCTGGCGCCG,-,0.00) 228(CGTCGCTG,+,0.00) 178(GCCTCTCAGGCC,+,0.00),189(CCCTCTCATCCC,+,0.00) 384(GAAACAGGAAAG,+,0.00) -52(GGGCCTGGCGCC,-,0.00) 561_WT_peak_3679 chr19 18390478 18390524 + 114 NA TTS (NM_005354) TTS (NM_005354) 1965 NM_005354 3727 Hs.2780 NM_005354 HPRD:01304 JUND AP-1 jun D proto-oncogene protein-coding 0.065217 0.702128 -156(GGCGGGGG,+,0.00) -132(ACCAGGCCCCGC,-,0.00) 561_WT_peak_3223 chr17 45908683 45909040 + 114 NA promoter-TSS (NM_033413) promoter-TSS (NM_033413) 46 NM_148887 124995 Hs.347535 NM_145255 HPRD:14738 MRPL10 L10MT|MRP-L10|MRP-L8|MRPL8|RPML8 mitochondrial ribosomal protein L10 protein-coding 0.078431 0.639665 101(GGGGCCGGAAGC,+,0.00) 142(AGACGCAT,-,0.00) 119(CGTACCCG,-,0.00) -26(CTTACCCG,-,0.00) 157(GCCGGGCCAACG,+,0.00) 12(CCGCCACG,-,0.00) 11(CCCGCCACGGCC,+,0.00),13(CGCCACGGCCGC,-,0.00) -2(CCCTCGCAGC,-,0.00) 561_WT_peak_2127 chr14 23030697 23030915 + 114 NA Intergenic Intergenic 27337 NM_001344 1603 Hs.82890 NM_001344 HPRD:02589 DAD1 OST2 defender against cell death 1 protein-coding 0.004587 0.502283 -19(GCTTCCGGCCCC,-,0.00) -87(AGGGCTGGGC,-,0.00) 561_WT_peak_4283 chr2 122407344 122407583 + 114 NA promoter-TSS (NM_015282) promoter-TSS (NM_015282) -102 NR_037856 254128 Hs.712685 NR_037856 ENSG00000236859 NIFK-AS1 - NIFK antisense RNA 1 ncRNA 0.046025 0.525000 7(TTGGTCGG,-,0.00) -23(TGGGTAAA,+,0.00) 561_WT_peak_1440 chr11 85375787 85376334 + 114 NA non-coding (NR_028027, exon 1 of 4) non-coding (NR_028027, exon 1 of 4) 122 NR_028027 58487 Hs.535319 NM_021212 HPRD:07340 CREBZF SMILE|ZF CREB/ATF bZIP transcription factor protein-coding 0.085923 0.642336 358(AAGTCTCT,+,0.00) -161(CCTCCTCCCCCG,+,0.00) 121(TCGACCCC,+,0.00) 147(AGGGACGGGA,-,0.00) 55(CCCCCGGC,-,0.00) 188(ACCGCGCC,+,0.00) -18(GGGCCGCGGT,+,0.00) 92(CCGAGTCG,-,0.00) 40(CCCCAGGGCGGG,-,0.00),130(CGCGCCAAGGCG,+,0.00),132(CGCCAAGGCGCG,-,0.00) 561_WT_peak_3158 chr17 37886864 37887047 + 114 NA promoter-TSS (NM_032339) promoter-TSS (NM_032339) -167 NM_032339 84299 Hs.333526 NM_032339 HPRD:12681 MIEN1 C17orf37|C35|ORB3|RDX12|XTP4 migration and invasion enhancer 1 protein-coding 0.071038 0.657609 -80(CCTCCTTCCCTG,+,0.00) -106(GGGCAGGGGCTG,-,0.00) -125(GCTCCGGAGC,+,0.00),-125(GCTCCGGAGC,-,0.00) 561_WT_peak_36 chr1 6663956 6664160 + 114 NA Intergenic Intergenic -1129 NM_014851 9903 Hs.7764 NM_014851 HPRD:17239 KLHL21 - kelch-like family member 21 protein-coding 0.034314 0.570732 561_WT_peak_1237 chr11 30344272 30344586 + 114 NA promoter-TSS (NM_152316) promoter-TSS (NM_152316) -220 NM_152316 120534 Hs.502208 NM_152316 ARL14EP ARF7EP|C11orf46|dJ299F11.1 ADP-ribosylation factor-like 14 effector protein protein-coding 0.041401 0.520635 105(CCGCCCCTTCCG,-,0.00) 561_WT_peak_731 chr1 219347222 219347454 + 114 NA promoter-TSS (NR_038845) promoter-TSS (NR_038845) 165 NM_001300769 127018 Hs.657617 NM_138794 HPRD:14335 LYPLAL1 - lysophospholipase-like 1 protein-coding 0.073276 0.613734 22(GTCGCCGGGCCC,-,0.00) -152(TGGCGGCT,+,0.00) -108(CCGGCAGGGAGG,-,0.00) -116(TCGTGTCG,+,0.00) 60(CGTCGCCA,+,0.00) -134(CGGTTCTG,-,0.00) -157(AGCGATGGCGGC,-,0.00) 561_WT_peak_4028 chr2 38604198 38604414 + 114 NA exon (NM_022374, exon 1 of 13) exon (NM_022374, exon 1 of 13) 126 NM_022374 64225 Hs.727652 NM_022374 HPRD:10662 ATL2 ARL3IP2|ARL6IP2|atlastin2 atlastin GTPase 2 protein-coding 0.138889 0.732719 27(TCCCCCTCCGCC,+,0.00) -106(CCCGCGGC,-,0.00) -27(GTCCGTCG,-,0.00) -21(CGCCGGCGCCAC,-,0.00) -108(GCCCCGCGGC,-,0.00) 561_WT_peak_221 chr1 45987406 45987747 + 114 NA promoter-TSS (NM_002574) promoter-TSS (NM_002574) 34 NM_002574 5052 Hs.180909 NM_002574 HPRD:01458 PRDX1 MSP23|NKEF-A|NKEFA|PAG|PAGA|PAGB|PRX1|PRXI|TDPX2 peroxiredoxin 1 protein-coding 0.099707 0.666667 71(AGAGGAGGGGGA,-,0.00) 97(CGCCCGGC,-,0.00) 52(GGGTGCCGGAGG,+,0.00) -110(GCCGCGCC,+,0.00) -158(GGCGGGCCCCGG,-,0.00),-96(CGCAGGGGCCGC,-,0.00),102(GGCGCGCCCCGC,-,0.00) 92(AGCCCCGCCC,-,0.00) 561_WT_peak_6783 chr7 102056105 102056315 + 114 NA intron (NM_024653, intron 5 of 5) MIR|SINE|MIR -17767 NM_001126340 80228 Hs.363308 NM_032831 HPRD:09860 ORAI2 C7orf19|CBCIP2|MEM142B|TMEM142B ORAI calcium release-activated calcium modulator 2 protein-coding 0.019048 0.573460 561_WT_peak_7297 chr9 73178558 73178841 + 114 NA intron (NM_001007471, intron 21 of 24) intron (NM_001007471, intron 21 of 24) -149126 NM_001206 687 Hs.150557 NM_001206 HPRD:04211 KLF9 BTEB|BTEB1 Kruppel-like factor 9 protein-coding 0.007067 0.440141 39(AACCACTT,-,0.00) 36(CAAAACCA,+,0.00),48(TGGTTTTG,-,0.00) 86(GCTTCCTGTCTT,-,0.00) 561_WT_peak_485 chr1 149298484 149298716 + 114 NA Intergenic tRNA-Val-GTG|tRNA|tRNA 11149 NR_111934 644634 Hs.723057 NR_111934 FAM231D - family with sequence similarity 231, member D ncRNA 0.064655 0.420601 28(AGCCGTTT,-,0.00) -159(CGAGTAAA,+,0.00) -7(TGCGCGGC,-,0.00) 561_WT_peak_3950 chr2 3622596 3623158 + 114 NA promoter-TSS (NM_001011) promoter-TSS (NM_001011) 24 NM_001011 6201 Hs.534346 NM_001011 HPRD:04712 RPS7 DBA8|S7 ribosomal protein S7 protein-coding 0.088968 0.639432 -141(TCGGCCTCCTTC,+,0.00),79(CCGCCCTCCTCC,+,0.00) 24(AGCCGCTT,-,0.00),289(AGCCGATT,-,0.00) 358(GCGGGAGGGCGA,-,0.00) 201(CCGACAGA,+,0.00) -115(AGGGCTGGGA,-,0.00) 344(GCCGGGGG,+,0.00) -33(CGGCACCA,-,0.00) 113(CTTCGGAC,+,0.00) 294(ATTACCCG,-,0.00) 325(GCGGGGCGAGCG,+,0.00),334(GCGGGGCCTGGC,+,0.00) 336(GGGGCCTGGCCG,+,0.00) 561_WT_peak_6586 chr7 6865930 6866115 + 114 NA promoter-TSS (NM_198097) promoter-TSS (NM_198097) -96 NM_198097 221960 Hs.567779 NM_198097 HPRD:12916 CCZ1B C7orf28B|H_NH0577018.2 CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae) protein-coding 0.081081 0.586022 -152(AGGCCCGGAAAA,+,0.00) -11(AAAAACCG,+,0.00) -81(TGGCCGAGTT,+,0.00) -135(CCGCCTCG,-,0.00) -133(GCCTCGCAGC,-,0.00) 561_WT_peak_2462 chr15 45011760 45012087 + 114 NA Intergenic MER57B2|LTR|ERV1 8238 NM_004048 567 Hs.534255 NM_004048 B2M - beta-2-microglobulin protein-coding 0.006116 0.439024 -87(GAACCAGGCAGC,+,0.00) 561_WT_peak_613 chr1 169661980 169662479 + 114 NA intron (NM_000655, intron 8 of 8) intron (NM_000655, intron 8 of 8) 15768 NR_029467 6402 Hs.728756 NM_000655 ENSG00000188404 SELL CD62L|LAM1|LECAM1|LEU8|LNHR|LSEL|LYAM1|PLNHR|TQ1 selectin L protein-coding 0.004008 0.384000 -151(AGGGTAAA,+,0.00) 561_WT_peak_4329 chr2 152118039 152118324 + 114 NA intron (NM_198557, intron 1 of 3) CpG 208 NM_198557 375287 Hs.302442 NM_198557 HPRD:10992 RBM43 C2orf38 RNA binding motif protein 43 protein-coding 0.105263 0.723776 -20(TGGCGACG,-,0.00) -79(CCCGCGCAGCCC,+,0.00) 10(CAAAACCC,+,0.00) -149(TTTGCCCG,-,0.00) -79(CCCGCGCA,+,0.00) -48(CCCGGTTCCGCG,-,0.00) -25(GACCATGGCGAC,-,0.00),33(TGCCATGGCGGA,-,0.00) 561_WT_peak_6112 chr6 16421060 16421468 + 114 NA intron (NM_001128164, intron 6 of 7) intron (NM_001128164, intron 6 of 7) 182453 NM_006877 2766 Hs.484741 NM_006877 HPRD:00754 GMPR GMPR1 guanosine monophosphate reductase protein-coding 0.009804 0.405868 -100(CAAAACTG,+,0.00),-54(CGGTTTTG,-,0.00) 203(CCTTCCTGTTTT,-,0.00) 120(GGGCAGCTTT,+,0.00) 561_WT_peak_2658 chr16 2390900 2391188 + 114 NA promoter-TSS (NM_001089) promoter-TSS (NM_001089) 121 NR_003574 650655 Hs.376281 NR_003574 ENSG00000238098 ABCA17P ABCA17 ATP-binding cassette, sub-family A (ABC1), member 17, pseudogene pseudo 0.118056 0.667820 -104(GCGCGGCAGCCC,+,0.00) -151(CGCGTGCG,+,0.00),-128(CGAGTACG,+,0.00),-126(AGTACGCG,-,0.00) -31(CCGAGCGA,+,0.00) -147(TGCGCAGT,-,0.00),-22(GGCGCGGT,-,0.00) -47(CGCGCAGCGGCG,+,0.00) 18(GTTTCGCAGC,-,0.00) 561_WT_peak_3620 chr19 10764098 10764620 + 114 NA promoter-TSS (NM_004516) promoter-TSS (NM_004516) 189 NR_024333 147727 Hs.631616 NR_024333 ENSG00000267100 ILF3-AS1 - ILF3 antisense RNA 1 (head to head) ncRNA 0.076628 0.615679 287(GGCGGCCGCG,+,0.00) 167(AGCCACCT,-,0.00),235(AAGCCTCT,+,0.00) -159(GAGTCCCAGCCC,+,0.00) 195(CCGGCCGA,+,0.00) 24(CGGGACGA,-,0.00) 291(GCCGCGCA,+,0.00) 561_WT_peak_6985 chr8 38243418 38243832 + 114 NA promoter-TSS (NM_001199659) promoter-TSS (NM_001199659) -334 NM_001286821 137994 Hs.696457 NM_144652 HPRD:08060 LETM2 - leucine zipper-EF-hand containing transmembrane protein 2 protein-coding 0.041063 0.479518 -36(GCGCTCCTTCCG,-,0.00) 5(TCCTCTCAGCGC,+,0.00) 43(GTCCGAGG,-,0.00) 31(CGGATTTG,-,0.00) 218(CCTTCGGGCCCC,-,0.00) 225(GCCCCCCAGC,-,0.00) 561_WT_peak_6854 chr7 134895902 134896252 + 114 NA intron (NM_014149, intron 1 of 14) CpG 239 NM_014149 29062 Hs.459858 NM_014149 HPRD:11035 WDR91 - WD repeat domain 91 protein-coding 0.114286 0.723647 -19(CGCCCCGGAGGC,+,0.00) 8(CCCGCTCCCCGG,+,0.00) 99(GGCGTCCA,-,0.00) -69(CGGACGCG,-,0.00) -43(CGGCGCGA,-,0.00),25(TCGGGCCG,+,0.00) -72(GGTCGGAC,+,0.00),-71(GTCGGACG,-,0.00) -23(CTCTCGCCCCGG,-,0.00) -132(GGGCGGCTTC,+,0.00) 561_WT_peak_3679-2 chr19 18390741 18391547 + 114 NA 3' UTR (NM_005354, exon 1 of 1) 3' UTR (NM_005354, exon 1 of 1) 1322 NM_005354 3727 Hs.2780 NM_005354 HPRD:01304 JUND AP-1 jun D proto-oncogene protein-coding 0.094293 0.650558 47(GGCAGCCGAG,+,0.00),80(GGCGGCCGCG,+,0.00) 563(AGCCGCTT,-,0.00) 130(TCGCCCCCCCGG,+,0.00),232(CGGGGAGGGGGG,-,0.00) 453(TGGACGCC,+,0.00),544(GGCGGCGA,-,0.00) 348(AGTACGCG,-,0.00) 299(GCCCGCCCCT,+,0.00) 112(GGCGGGGG,+,0.00) 10(CCCTCGGAGCCC,+,0.00) 62(CGGGTTTG,-,0.00) 95(GAAAGAGGCAGC,+,0.00) 30(GGCGCGGT,-,0.00),201(GCCGCGCC,+,0.00),320(GCCGCGCA,+,0.00),558(TGCGCAGC,-,0.00) 127(CGCTCGCCCCCC,-,0.00) 199(GGGCCGCGCC,+,0.00) -98(CCGAGTAG,-,0.00),52(CCGAGACG,-,0.00) 545(GCGGCGATGC,+,0.00) 561_WT_peak_5791 chr5 68664949 68665487 + 114 NA promoter-TSS (NM_001278622) promoter-TSS (NM_001278622) 94 NM_133343 5884 Hs.16184 NM_002873 HPRD:09124 RAD17 CCYC|HRAD17|R24L|RAD17SP|RAD24 RAD17 homolog (S. pombe) protein-coding 0.091078 0.695733 262(GGAGCCGGAAGG,+,0.00) 62(CTCGGCCGGC,-,0.00),343(GGCGGCCCAG,+,0.00) 139(CTGCCCCAGCCC,+,0.00) 63(TCGGCCGG,-,0.00) 271(AGGGGCGGGC,-,0.00) -55(CCCCCGCC,-,0.00) 267(CGGAAGGGGCGG,+,0.00) 81(GGGCAGTGAGGG,-,0.00) -1(CCCTCGCCTCCC,-,0.00) 49(CCGCCTCG,-,0.00),213(CCGCGACG,-,0.00) 561_WT_peak_5047 chr3 31573300 31573845 + 114 NA promoter-TSS (NM_178862) promoter-TSS (NM_178862) -421 NM_178862 201595 Hs.475812 NM_178862 STT3B CDG1X|SIMP|STT3-B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) protein-coding 0.124771 0.641026 252(AGGCCGCT,+,0.00),307(AGCCGCCT,-,0.00) 51(CAGCGCCAGCCG,+,0.00) 94(CCGACCCA,+,0.00),329(CCGACCGC,+,0.00) 267(TCCCGCCCCT,+,0.00) -31(CCCGCGGC,-,0.00),35(GCCGCGGG,+,0.00) 90(CGGCCCGA,-,0.00) 346(CGAAACCG,+,0.00) 164(CGGGTTAA,+,0.00) 128(TGCGCGGC,-,0.00),153(TCCGCGCA,+,0.00) 302(AGCGGAGCCGCC,+,0.00),344(CGCGAAACCGCG,+,0.00) 309(CCGCCTAG,-,0.00) 257(GCTCCGCAGT,-,0.00) 561_WT_peak_3757 chr19 39340206 39340696 + 114 NA exon (NM_001533, exon 1 of 13) exon (NM_001533, exon 1 of 13) 166 NM_001533 3191 Hs.644906 NM_001533 HPRD:04360 HNRNPL HNRPL|hnRNP-L heterogeneous nuclear ribonucleoprotein L protein-coding 0.124490 0.743381 68(CCCGGCCGCC,-,0.00),113(CTCCGCCGCC,-,0.00) 55(AGCCGCTT,-,0.00) -63(CGGCCTTCCCAG,+,0.00),-13(CCGCCGCCCCGG,+,0.00),250(CCGCCTCCCCCC,+,0.00) 195(CCGACGCC,+,0.00) -129(CGCGTGCG,+,0.00) 149(CCGACCGC,+,0.00) 257(CCCCCGCC,-,0.00) -25(CGCCGCCGCCGC,-,0.00),193(CGCCGACGCCGC,-,0.00) -145(GACGCGATGGCC,+,0.00),231(CGACATGGCGGC,-,0.00) -60(CCTTCCCAGC,-,0.00) 64(GGGGCCCGGCCG,+,0.00) 561_WT_peak_847 chr10 3825629 3826264 + 114 NA intron (NM_001300, intron 1 of 3) intron (NM_001300, intron 1 of 3) 1527 NM_001300 1316 Hs.4055 NM_001300 HPRD:03632 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel-like factor 6 protein-coding 0.033071 0.503145 330(GGGGGAGGGGGA,-,0.00) 9(AGGCGTCT,+,0.00) -154(CGGGCAGGGA,-,0.00) 561_WT_peak_3738 chr19 36705609 36706403 + 114 NA promoter-TSS (NM_152477) promoter-TSS (NM_152477) -20 NM_001042474 147929 Hs.596338 NM_152477 HPRD:15846 ZNF565 - zinc finger protein 565 protein-coding 0.069270 0.583648 44(GGCGGCCAAG,+,0.00) -45(GGCGTCGC,-,0.00) 347(TCGGTCGG,-,0.00) 404(AGGGCAGGGA,-,0.00) 397(CGGCGCGA,-,0.00) -43(CGTCGCCA,+,0.00),126(AAGCGACG,-,0.00) 444(GGGCGGAGATGG,-,0.00) 349(GGTCGGAC,+,0.00) 468(CGGGTTTG,-,0.00) 393(GGCGCGGC,-,0.00) 396(GCGGCGCGAGGG,+,0.00) 192(GGGCCGCGTC,+,0.00) 186(CGAGGCGG,+,0.00),195(CCGCGTCG,-,0.00),198(CGTCGCGG,+,0.00),338(CGTCTCGG,+,0.00) -93(GGGGCCTGGCTC,+,0.00),187(GAGGCGGGCCGC,-,0.00) 561_WT_peak_2293 chr14 75593313 75594002 + 114 NA 5' UTR (NM_033116, exon 1 of 22) 5' UTR (NM_033116, exon 1 of 22) 121 NM_033116 91754 Hs.7200 NM_033116 HPRD:11386 NEK9 NERCC|NERCC1|Nek8 NIMA-related kinase 9 protein-coding 0.114659 0.695652 -117(CGACCCGACAGC,+,0.00),183(ATGCCCGGAGGC,+,0.00),224(GATGCCGGCCCG,-,0.00),288(CGACCCGGAAAC,+,0.00) 151(GGCGGCCGCG,+,0.00) -152(CTGGGAAAGCGG,-,0.00),-138(CCGAGAAGGAGG,-,0.00) -89(GGCGCCGA,-,0.00) 126(CGTACTCG,-,0.00) 155(GCCGCGGG,+,0.00) -141(GGGCCGAGAAGG,-,0.00) 447(TGGAACCGAAGG,+,0.00) 14(GCCGCGCC,+,0.00) 194(CCCTGGCCGCGC,-,0.00) -138(CCGAGAAG,-,0.00),258(CCGCGAAG,-,0.00) 142(CGACATGGCGGC,-,0.00),192(GGCCCTGGCCGC,-,0.00) 9(GCTCCGCCGC,-,0.00),17(GCGCCGCCGC,-,0.00) 314(CCGGCCTGGCTG,+,0.00) 561_WT_peak_737 chr1 222817293 222817486 + 114 NA promoter-TSS (NM_001300867) promoter-TSS (NM_001300867) -256 NM_001300867 375056 Hs.118474 NM_198551 ENSG00000154305 MIA3 ARNT|D320|TANGO|TANGO1|UNQ6077 melanoma inhibitory activity family, member 3 protein-coding 0.062176 0.623711 -22(TCCCTGGCCT,+,0.00) -86(CGGCACGA,-,0.00) -30(CAGGTAAA,+,0.00) -159(GCCGCGCA,+,0.00),-49(GCCGCCCA,+,0.00) 561_WT_peak_839 chr1 249240413 249240601 + 114 NA Intergenic (TTAGGG)n|Simple_repeat|Simple_repeat 40065 NM_170725 267002 Hs.602037 NM_170725 PGBD2 - piggyBac transposable element derived 2 protein-coding 0.000000 0.513228 561_WT_peak_4053 chr2 44395993 44396250 + 113 NA 5' UTR (NM_177968, exon 1 of 6) 5' UTR (NM_177968, exon 1 of 6) 121 NM_001033556 5495 Hs.416769 NM_002706 HPRD:04796 PPM1B PP2C-beta|PP2C-beta-X|PP2CB|PP2CBETA|PPC2BETAX protein phosphatase, Mg2+/Mn2+ dependent, 1B protein-coding 0.108949 0.678295 34(GGCGGCCGAA,+,0.00) -130(AGCGGCTT,-,0.00) -157(GCGGGGAGGGGG,-,0.00) -55(TCCTGCCG,+,0.00) 51(CGGCGCTA,+,0.00) -48(GGCGCGGC,-,0.00) 81(GCGGCGGCGGCG,+,0.00) 561_WT_peak_5113 chr3 50388417 50388647 + 113 NA promoter-TSS (NM_006545) promoter-TSS (NM_006545) -46 NM_006545 10641 Hs.437083 NM_006545 HPRD:06147 NPRL2 NPR2|NPR2L|TUSC4 nitrogen permease regulator-like 2 (S. cerevisiae) protein-coding 0.065217 0.610390 32(CCTGGAAGGCGG,-,0.00) 39(GGCGGGCCAGCG,+,0.00) 561_WT_peak_3241 chr17 47817072 47817463 + 113 NA intron (NM_030802, intron 1 of 7) intron (NM_030802, intron 1 of 7) 24251 NM_030802 81558 Hs.514308 NM_030802 HPRD:17432 FAM117A - family with sequence similarity 117, member A protein-coding 0.010230 0.535714 170(AGCCACTT,-,0.00) 122(CAAAACAG,+,0.00) 561_WT_peak_4793 chr21 38640171 38640579 + 113 NA promoter-TSS (NM_006052) promoter-TSS (NM_006052) -542 NM_006052 10311 Hs.369488 NM_006052 HPRD:10390 DSCR3 DCRA|DSCRA Down syndrome critical region gene 3 protein-coding 0.095588 0.684597 -23(CAGCGCCAGCTG,+,0.00) 40(GCCGCGGG,+,0.00) 77(GGGCCGCGAGGG,-,0.00) -86(GCGGCCCCTGCG,+,0.00) 34(CTCGGAGCCGCG,+,0.00),66(CCGGGCTCCGCG,-,0.00) -29(GCGTCCCAGC,-,0.00) 561_WT_peak_399 chr1 115300141 115300942 + 113 NA intron (NM_001007553, intron 1 of 19) intron (NM_001007553, intron 1 of 19) 130 NM_001242892 7812 Hs.69855 NM_007158 HPRD:15949 CSDE1 D1S155E|UNR cold shock domain containing E1, RNA-binding protein-coding 0.056180 0.578554 542(AGGCGTCT,+,0.00) 92(AGGGCAGGGA,-,0.00) 545(CGTCTCTA,+,0.00) 591(GGGGTAAA,+,0.00) 386(TGCGCAGC,-,0.00) -149(CAGACAAGCCGC,-,0.00) 561_WT_peak_2269 chr14 69865071 69865524 + 113 NA promoter-TSS (NM_001252148) promoter-TSS (NM_001252148) -88 NM_001252150 55334 Hs.432690 NM_018375 HPRD:15387 SLC39A9 ZIP-9|ZIP9 solute carrier family 39, member 9 protein-coding 0.046358 0.495595 216(GACTCCGGGTCA,-,0.00) 221(CGGGTCAA,+,0.00),261(CGGGTATA,+,0.00) 186(CTTGGCGG,+,0.00) 190(GCGGCCATGGCA,+,0.00),192(GGCCATGGCAGC,-,0.00) 561_WT_peak_836 chr1 249200373 249200699 + 113 NA promoter-TSS (NM_170725) promoter-TSS (NM_170725) 94 NM_170725 267002 Hs.602037 NM_170725 PGBD2 - piggyBac transposable element derived 2 protein-coding 0.122699 0.691131 -135(GCCGGCCGAG,+,0.00) -88(GCGACGCC,+,0.00),-81(CCGACGCC,+,0.00),62(GGCGTTGA,-,0.00) -134(CCGGCCGA,+,0.00) -110(TGGTGCCG,+,0.00) -83(GCCCGACG,-,0.00) -97(TGCGCGGC,-,0.00),-49(GGCGCGGC,-,0.00) -90(CCGCGACG,-,0.00) -91(GCCGCGACGC,+,0.00) 561_WT_peak_4923 chr22 39925250 39925423 + 113 NA 3' UTR (NM_194326, exon 4 of 4) 3' UTR (NM_194326, exon 4 of 4) 3524 NM_194326 91582 Hs.526933 NM_194326 HPRD:14674 RPS19BP1 AROS|S19BP|dJ1104E15.4 ribosomal protein S19 binding protein 1 protein-coding 0.075145 0.678161 -8(TGCTGGCCGCGC,-,0.00) -55(CTCAGCTCCGCG,-,0.00) -51(GCTCCGCGGC,-,0.00) 561_WT_peak_1020 chr10 69609152 69609432 + 113 NA Intergenic Intergenic -11355 NM_021800 56521 Hs.260720 NM_021800 HPRD:06930 DNAJC12 JDP1 DnaJ (Hsp40) homolog, subfamily C, member 12 protein-coding 0.053571 0.540925 -15(CCCCCCTCCGCC,+,0.00) -60(GGAACCGGAAAC,+,0.00) -128(AAGCGTCT,+,0.00) -141(CCTCCCTGCCGG,+,0.00) -4(CCCCCGCC,-,0.00) -14(CCCCCTCCGCCC,+,0.00) -134(GCCGGGAAGC,+,0.00) 561_WT_peak_6515 chr6 151610582 151610779 + 113 NA intron (NM_005100, intron 2 of 4) intron (NM_005100, intron 2 of 4) -35986 NM_144497 9590 Hs.371240 NM_005100 HPRD:05263 AKAP12 AKAP250|SSeCKS A kinase (PRKA) anchor protein 12 protein-coding 0.005076 0.378788 561_WT_peak_5704 chr5 40429621 40429884 + 113 NA Intergenic Intergenic -250280 NM_000958 5734 Hs.199248 NM_000958 HPRD:03350 PTGER4 EP4|EP4R prostaglandin E receptor 4 (subtype EP4) protein-coding 0.000000 0.371212 -18(CAAAACTG,+,0.00) 561_WT_peak_849 chr10 3827696 3828346 + 113 NA promoter-TSS (NR_027653) promoter-TSS (NR_027653) -548 NM_001160124 1316 Hs.4055 NM_001300 HPRD:03632 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel-like factor 6 protein-coding 0.095385 0.709677 413(TCCTCCGGGCCA,-,0.00) -131(GGCGGCCGCG,+,0.00),-94(CGCGGCCGAG,+,0.00) 184(TCTACGCC,+,0.00) 67(CCGCGCGAGCCC,+,0.00) -72(CCCGCGGC,-,0.00),189(GCCGGGGG,+,0.00) -47(GGGCTGGGAGAG,-,0.00),320(CCCTCTCTGTCC,+,0.00),348(CCCTCTCTGTCC,+,0.00) 339(CCTCCGGGTCCC,-,0.00) -96(TGCGCGGC,-,0.00) 59(CCCTGTCGCCGC,-,0.00) -28(GGGCCGCGTC,+,0.00) -25(CCGCGTCG,-,0.00) 561_WT_peak_912 chr10 22624188 22624547 + 113 NA Intergenic CpG -10007 NM_172242 9576 Hs.655170 NM_012443 HPRD:09305 SPAG6 CT141|Repro-SA-1|pf16 sperm associated antigen 6 protein-coding 0.083565 0.594444 16(GGCGGGCGAG,+,0.00) -4(AGCGGCCT,-,0.00),55(AGCCGCCA,-,0.00) 184(CCTCCTCCGCGG,+,0.00) 150(CGGTTTTA,-,0.00) -6(AAAGCGGCCT,-,0.00) -97(CTTCTCGG,+,0.00) 561_WT_peak_6728 chr7 75677218 75677671 + 113 NA promoter-TSS (NM_016086) promoter-TSS (NM_016086) 107 NM_005918 4191 Hs.520967 NM_005918 HPRD:01099 MDH2 M-MDH|MDH|MGC:3559|MOR1 malate dehydrogenase 2, NAD (mitochondrial) protein-coding 0.088300 0.709251 111(CGCCCGGC,-,0.00),198(CCCCCGGC,-,0.00) 107(CCCTCGCCCGGC,-,0.00) 151(ACCTCGGCCC,-,0.00) 114(CCGGCCTGCCAG,+,0.00) 561_WT_peak_5854 chr5 94128989 94129258 + 113 NA intron (NM_001297777, intron 15 of 19) intron (NM_001297777, intron 15 of 19) 174732 NM_032290 84250 Hs.657315 NM_032290 HPRD:08538 ANKRD32 BRCTD1|BRCTx ankyrin repeat domain 32 protein-coding 0.007435 0.374074 561_WT_peak_1779 chr12 76953280 76953607 + 112 NA 5' UTR (NM_020841, exon 1 of 24) 5' UTR (NM_020841, exon 1 of 24) 146 NM_020841 114882 Hs.430849 NM_020841 HPRD:09478 OSBPL8 MST120|MSTP120|ORP8|OSBP10 oxysterol binding protein-like 8 protein-coding 0.119266 0.713415 -160(CTCGGCCGCT,-,0.00) 10(AGCGGCTA,-,0.00) 22(GGCGTCCA,-,0.00),95(TCGCCGCC,+,0.00) -10(TCAGTCGG,-,0.00) -84(CCGGCTCAGCCC,+,0.00) 115(CAGAACCG,+,0.00) 151(CCCCTGCCCCGC,-,0.00) 65(CGTCGCGG,+,0.00),90(CCGCGTCG,-,0.00),120(CCGCGAAG,-,0.00) 64(GCGTCGCGGC,-,0.00),92(GCGTCGCCGC,-,0.00) 561_WT_peak_1488 chr11 114270794 114271180 + 112 NA promoter-TSS (NM_001286048) promoter-TSS (NM_001286048) -264 NM_001286045 10179 Hs.7527 NM_016090 HPRD:11488 RBM7 - RNA binding motif protein 7 protein-coding 0.082902 0.633075 44(CCACCCTGCTCC,+,0.00) -161(TGGCGGCT,+,0.00) -105(TCGACGGC,+,0.00) -94(CGGCCCGA,-,0.00) 178(TGTCGGAC,+,0.00) -132(CCTTGGGCTCCG,-,0.00) -155(CTCCGGCCCCGG,-,0.00) 151(CGCGGCTCCCCA,-,0.00) -163(CTTGGCGG,+,0.00),148(CTTCGCGG,+,0.00) 21(GTCGCCATGGGA,+,0.00) 561_WT_peak_5737 chr5 49963427 49963646 + 112 NA intron (NM_024615, intron 1 of 25) CpG 764 NM_001178056 79668 Hs.369581 NM_024615 HPRD:07960 PARP8 ARTD16|pART16 poly (ADP-ribose) polymerase family, member 8 protein-coding 0.091324 0.681818 32(CCGCGAGCCCGG,+,0.00) -142(GGCGCCGA,-,0.00) -147(CGCCCGGC,-,0.00) -97(CCTTCGGCTCCC,-,0.00) 561_WT_peak_7044 chr8 67579358 67579760 + 112 NA promoter-TSS (NM_001204173) promoter-TSS (NM_001204173) -107 NM_025054 80124 Hs.632066 NM_025054 HPRD:15645 VCPIP1 DUBA3|VCIP135 valosin containing protein (p97)/p47 complex interacting protein 1 protein-coding 0.052239 0.568238 83(AAGCGGTT,+,0.00) 561_WT_peak_5435 chr4 26320946 26321426 + 112 NA promoter-TSS (NM_005349) promoter-TSS (NM_005349) -146 NM_203283 3516 Hs.479396 NM_005349 HPRD:00920 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding 0.118750 0.688150 -87(CCGCCCTCCGCC,+,0.00),6(CCGCCCGCCTCC,+,0.00) -33(AAGCCGCT,+,0.00) -59(GCGCCTTCCCGC,+,0.00),-46(CCGCCTCCGCGG,+,0.00),9(CCCGCCTCCCGG,+,0.00),10(CCGCCTCCCGGG,+,0.00),17(CCGGGCACGCGC,-,0.00) 289(GGCGGCGA,-,0.00) 286(TCGGGCGG,-,0.00) -93(CCCCCGCC,-,0.00) 28(CTGCACGA,-,0.00) 232(TGCGCAGT,-,0.00),253(GCCGCGCC,+,0.00) 248(CGCGGGCCGCGC,-,0.00) -47(CCCGCCTCCGCG,-,0.00),75(CTTGGCTCCGCG,-,0.00) 251(GGGCCGCGCC,+,0.00) 168(CCGAGTAG,-,0.00) 561_WT_peak_5494 chr4 57333716 57334124 + 112 NA intron (NM_001267722, intron 1 of 16) CpG 158 NM_006947 6731 Hs.237825 NM_006947 SRP72 BMFF|BMFS1|HEL103 signal recognition particle 72kDa protein-coding 0.095588 0.679707 86(GTTTCCGGCGCG,-,0.00) 161(CGCCCGGC,-,0.00) 184(CGGAAGACGCAG,+,0.00) 14(CAAGACCG,+,0.00) 79(GCGGCCTGTTTC,-,0.00) -71(GCGGCGGCAGCG,+,0.00),55(GCGGGCCCAGGC,+,0.00) 561_WT_peak_7371 chr9 101018123 101018392 + 112 NA promoter-TSS (NM_001267571) promoter-TSS (NM_001267571) -254 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family, member 2 protein-coding 0.070632 0.614815 90(GGCGTCGC,-,0.00) 30(TCGGACGG,-,0.00) 28(CCTCGGAC,+,0.00) 71(GCTGGGAGGC,+,0.00) 561_WT_peak_2283 chr14 74225525 74225806 + 112 NA TTS (NR_039727) TTS (NR_039727) 215 NR_039727 100616158 NR_039727 miRBase:MI0016868 MIR4505 - microRNA 4505 ncRNA 0.088968 0.698582 -131(TCCCCTTCCTCC,+,0.00) -104(AGAGGCCT,-,0.00) -11(CCGGCCGA,+,0.00) -130(CCCCTTCCTCCC,-,0.00) 59(GGGCTGGGAGGG,-,0.00) -111(TTTACCCA,-,0.00) 76(GCGGCGCGGGCG,+,0.00) 46(CGAGGCACCGCG,-,0.00) -101(GGCCTTGGGGGC,-,0.00) 73(GCGGCGGCGC,+,0.00) 561_WT_peak_789 chr1 231473320 231473554 + 112 NA promoter-TSS (NM_032018) promoter-TSS (NM_032018) 141 NM_175876 149371 Hs.356198 NM_175876 HPRD:09943 EXOC8 EXO84|Exo84p|SEC84 exocyst complex component 8 protein-coding 0.115385 0.680851 10(CTCTCCGGGTCT,-,0.00) -30(AGGCGGCT,+,0.00) 41(TCGGCGCC,+,0.00) -13(GTCCGACA,-,0.00) -59(CAAAACCC,+,0.00) -68(GCCGCGCC,+,0.00) 44(GCGCCGCAGC,-,0.00) 561_WT_peak_3426 chr18 9095017 9095094 + 112 NA Intergenic Intergenic -7573 NM_021074 4729 Hs.464572 NM_021074 HPRD:02757 NDUFV2 CI-24k NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa protein-coding 0.000000 0.435897 561_WT_peak_7471 chr9 135906127 135906515 + 112 NA 5' UTR (NM_001286709, exon 1 of 9) 5' UTR (NM_001286709, exon 1 of 9) 259 NM_001122823 9328 Hs.495417 NM_012087 HPRD:16077 GTF3C5 TFIIIC63|TFIIICepsilon|TFiiiC2-63 general transcription factor IIIC, polypeptide 5, 63kDa protein-coding 0.090206 0.637532 116(GGAGGCGGCCGA,-,0.00) 110(GGCGGCGGAG,+,0.00),119(GGCGGCCGAT,+,0.00) 211(ATGTGGCT,+,0.00) 103(CAGGGATGGCGG,-,0.00),142(CCGCCGTCCCCG,+,0.00) 18(CGGAACGA,-,0.00) 168(GAGCGACG,-,0.00) -85(TTTTCCCG,-,0.00) -150(TGCTTGCCCCGC,-,0.00),84(GCGGGCCCTGCC,+,0.00) 121(CGGCCGATTT,+,0.00) 29(CTTCGCGG,+,0.00) 561_WT_peak_1079 chr10 88471013 88471324 + 112 NA intron (NM_001171610, intron 9 of 13) CpG 42742 NM_007078 11155 Hs.657271 NM_007078 HPRD:16172 LDB3 CMD1C|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP LIM domain binding 3 protein-coding 0.122186 0.772436 -67(CGGGCCGGAGCC,+,0.00),62(AGGCCCGGCTGC,+,0.00) 8(GGCGGCCGGG,+,0.00) -140(CCGGGGGCGCGC,-,0.00),-101(CCTCCTTCCCGG,+,0.00),13(CCGGGCGGGCGC,-,0.00),57(CCGGGAGGCCCG,-,0.00) -91(GGGCTGGGGCCC,-,0.00),15(GGGCGGGCGCGC,-,0.00) -58(GCCGCGGG,+,0.00),12(GCCGGGCG,+,0.00) -32(GCCGCGCA,+,0.00) -154(GCGGCGTCAGGG,+,0.00),-132(GCGCGGCCAGCC,+,0.00),-37(CCCAGGCCGCGC,-,0.00),12(GCCGGGCGGGCG,+,0.00) -64(GCCGGAGCCGCG,+,0.00) 69(GCTGCCAAGC,+,0.00) -161(CCGCCAGGCGGC,-,0.00),-129(CGGCCAGCCCGC,-,0.00),9(GCGGCCGGGCGG,+,0.00),61(GAGGCCCGGCTG,+,0.00) 561_WT_peak_5052 chr3 33015434 33015714 + 112 NA Intergenic Intergenic 22508 NM_005508 1233 Hs.184926 NM_005508 CCR4 CC-CKR-4|CD194|CKR4|CMKBR4|ChemR13|HGCN:14099|K5-5 chemokine (C-C motif) receptor 4 protein-coding 0.003571 0.487544 561_WT_peak_1271 chr11 47236069 47236572 + 112 NA promoter-TSS (NM_000107) promoter-TSS (NM_000107) -173 NM_000107 1643 Hs.700338 NM_000107 HPRD:02886 DDB2 DDBB|UV-DDB2 damage-specific DNA binding protein 2, 48kDa protein-coding 0.055666 0.607143 181(CGCCCCTCCCGG,+,0.00),189(CCGGGAGCGCTG,-,0.00),220(CCCCCTCCCCGC,+,0.00),228(CCGCGCCCCCGC,+,0.00),236(CCGCCTTCCAGG,+,0.00) 153(GGGCTGGCACTG,-,0.00),274(GGGCCGGAGCTC,-,0.00) -45(GGCGTACG,+,0.00),-43(CGTACGCT,-,0.00) 178(TCCCGCCCCT,+,0.00) -57(GCCGGGCG,+,0.00),233(CCCCCGCC,-,0.00) 180(CCGCCCCTCCCG,-,0.00) 196(CGCTGGCACCGC,-,0.00) -131(AGACCGGCCC,-,0.00),251(GGGCGGGGTC,+,0.00) 262(CCGAGACG,-,0.00) 561_WT_peak_4696 chr20 52824641 52824986 + 112 NA intron (NM_002623, intron 1 of 3) CpG 311 NM_002623 5203 Hs.91161 NM_002623 HPRD:05358 PFDN4 C1|PFD4 prefoldin subunit 4 protein-coding 0.115942 0.763006 -96(CTCGGCCGCT,-,0.00) 107(CCGCCTCCCGCG,+,0.00) 19(CGCCTGGCGCCC,-,0.00),74(GGGCTGGGGCCG,-,0.00) -112(TCGGGCGG,-,0.00) 79(GGGGCCGGGA,-,0.00) -1(CCCGCGGC,-,0.00) -40(CGTGGGAC,+,0.00) -60(TGCGCAGC,-,0.00) -110(GGGCGGCGCC,+,0.00) 59(CGAGGCGG,+,0.00) -54(GCTCCGAAGC,+,0.00) 561_WT_peak_6718 chr7 74489330 74489687 + 112 NA exon (NM_030798, exon 1 of 11) exon (NM_030798, exon 1 of 11) 209 NM_001281441 81554 Hs.529623 NM_030798 HPRD:15654 WBSCR16 - Williams-Beuren syndrome chromosome region 16 protein-coding 0.117647 0.715084 30(CTCAGCCGCC,-,0.00) -15(GAGCGCCTGGCC,+,0.00),17(CAGCCCCGGCCC,+,0.00),49(GAGCCCCAGCCA,+,0.00) -30(TCGCGCCG,+,0.00) -44(CGGCTTCTGCCG,-,0.00) 26(CCCGCTCAGCCG,+,0.00) -93(GCGCGGGCAGCG,+,0.00),-27(CGCCGGCTCCGG,-,0.00) -128(CCGAGAAG,-,0.00),-50(CCGCCTCG,-,0.00) 44(CAGCCGAGCCCC,-,0.00) 561_WT_peak_2090 chr13 100259006 100259202 + 112 NA intron (NR_104592, intron 1 of 9) CpG 186 NM_206808 171425 Hs.655642 NM_206808 HPRD:10838 CLYBL CLB citrate lyase beta like protein-coding 0.127551 0.756345 2(AGGTCGCT,+,0.00) -146(CCCCGTTCCCCG,+,0.00),-137(CCGCCTTCCCGG,+,0.00) -131(TCCCGGCCCG,+,0.00),-88(CGGGCCGGGC,-,0.00) -117(GCCGCGGG,+,0.00),-85(GCCGGGCG,+,0.00) -81(GGCGCGGC,-,0.00) -89(GCGGGCCGGGCG,+,0.00) -129(CCGGCCCGGCTC,+,0.00) 561_WT_peak_3885 chr19 53606412 53606633 + 112 NA 5' UTR (NM_033288, exon 1 of 6) 5' UTR (NM_033288, exon 1 of 6) 165 NM_198893 90338 Hs.655967 NM_033288 HPRD:11856 ZNF160 F11|HKr18|HZF5|KR18 zinc finger protein 160 protein-coding 0.067873 0.603604 -90(GTCTCCGGGCCC,-,0.00) -94(AAGCGTCT,+,0.00) -21(TAGCGACC,-,0.00) -63(TTTACCTG,-,0.00) -137(CCGGGGGCAGGG,+,0.00) 561_WT_peak_2134 chr14 23388076 23388384 + 112 NA promoter-TSS (NR_120599) promoter-TSS (NR_120599) 166 NM_018107 55147 Hs.4997 NM_018107 HPRD:15227 RBM23 CAPERbeta|RNPC4 RNA binding motif protein 23 protein-coding 0.061688 0.569579 -134(TCGTGACG,+,0.00) -51(GGGTTTTG,-,0.00) 561_WT_peak_3859 chr19 50094472 50094690 + 112 NA promoter-TSS (NM_020719) promoter-TSS (NM_020719) -331 NM_020719 57479 Hs.590971 NM_020719 ENSG00000126464 PRR12 KIAA1205 proline rich 12 protein-coding 0.105505 0.753425 -126(GGCGGCGA,-,0.00) -61(GAGCGCGCGCCC,+,0.00) -137(GCGGCGGCGGCG,+,0.00),-134(GCGGCGGCGGCG,+,0.00),-131(GCGGCGGCGGCG,+,0.00),-18(GCGGAGACAGCG,+,0.00) 561_WT_peak_4205 chr2 95831215 95831391 + 112 NA 5' UTR (NM_001282398, exon 1 of 4) 5' UTR (NM_001282398, exon 1 of 4) 141 NM_001017396 7549 Hs.590916 NM_021088 HPRD:11834 ZNF2 A1-5|ZNF661|Zfp661 zinc finger protein 2 protein-coding 0.062500 0.598870 561_WT_peak_873 chr10 7311279 7311586 + 112 NA intron (NM_001018039, intron 7 of 20) intron (NM_001018039, intron 7 of 20) 139871 NM_001018039 57713 Hs.407983 NM_001018039 ENSG00000198879 SFMBT2 - Scm-like with four mbt domains 2 protein-coding 0.029316 0.435065 561_WT_peak_5880 chr5 114598118 114598761 + 112 NA exon (NM_005023, exon 1 of 9) exon (NM_005023, exon 1 of 9) 130 NM_005023 5229 Hs.254006 NM_005023 HPRD:03612 PGGT1B BGGI|GGTI protein geranylgeranyltransferase type I, beta subunit protein-coding 0.071540 0.607143 292(CGACCCGGAATC,+,0.00) 18(GGCGGCCGCG,+,0.00) 84(GCCCGGGCCT,+,0.00) 190(ACGTGCCG,+,0.00) 277(AAGCGACG,-,0.00) 55(GTCCGACT,-,0.00),284(GTCCGCCG,-,0.00) 159(CAAAACCT,+,0.00) -145(CGGGTAAA,+,0.00) 16(TGGGCGGC,-,0.00),22(GCCGCGCA,+,0.00),65(GCCGCGCC,+,0.00) 259(GCCGCCATGCTG,+,0.00) 22(GCCGCGCAGC,-,0.00) 98(CCAGCCTGGCTG,+,0.00) 561_WT_peak_3426-2 chr18 9095237 9095600 + 112 NA Intergenic Intergenic -7210 NM_021074 4729 Hs.464572 NM_021074 HPRD:02757 NDUFV2 CI-24k NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa protein-coding 0.016529 0.461538 97(AGGAAGAAGGGG,+,0.00) 561_WT_peak_3302 chr17 62493126 62493499 + 112 NA promoter-TSS (NM_007215) promoter-TSS (NM_007215) -128 NM_007215 11232 Hs.437009 NM_007215 HPRD:09228 POLG2 HP55|MTPOLB|PEOA4|POLB|POLG-BETA|POLGB polymerase (DNA directed), gamma 2, accessory subunit protein-coding 0.075067 0.553476 -12(GACGCCGGCTCG,-,0.00) 113(AGCCACTT,-,0.00) 21(CGTTCGCG,-,0.00) -30(CCCCCGCC,-,0.00) 140(CTGTTTTG,-,0.00) -24(CCCACCATGGCG,+,0.00),-22(CACCATGGCGGA,-,0.00) 561_WT_peak_437 chr1 145139114 145139196 + 112 NA intron (NM_001277444, intron 20 of 24) intron (NM_001277444, intron 20 of 24) 42748 NM_004892 9554 Hs.632438 NM_004892 SEC22B ERS-24|SEC22L1 SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene) protein-coding 0.000000 0.433735 561_WT_peak_437-2 chr1 145139284 145139562 + 112 NA intron (NM_001277444, intron 20 of 24) intron (NM_001277444, intron 20 of 24) 43016 NM_004892 9554 Hs.632438 NM_004892 SEC22B ERS-24|SEC22L1 SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene) protein-coding 0.057554 0.584229 -147(CGGTCTTG,-,0.00) 50(CAGGCACGCCGC,-,0.00) 561_WT_peak_3736 chr19 36605603 36606082 + 112 NA promoter-TSS (NM_001281) promoter-TSS (NM_001281) -46 NM_001281 1155 Hs.31053 NM_001281 HPRD:03196 TBCB CG22|CKAP1|CKAPI tubulin folding cofactor B protein-coding 0.081420 0.608333 -107(CTCGCCCGCC,-,0.00) 213(TCGCCGCC,+,0.00) 252(AGAGCCGGGA,-,0.00) -85(CCGCTCCCTCCG,-,0.00) -9(TGGCGACG,-,0.00) 4(CCCGCGCAGCCC,+,0.00),13(CCCTCCCAGCCT,+,0.00) -21(CGTCGGGC,+,0.00) 257(CGGGAAAA,+,0.00) 4(CCCGCGCA,+,0.00),97(GCTGCGCA,+,0.00),142(TCCGCGCA,+,0.00) 29(CGCTTGCTCCGC,-,0.00) 91(GGCGGAGCTGCG,+,0.00) 90(GGGCGGAGCT,+,0.00) 122(CCGCCTCG,-,0.00) -16(GGCTCCATGGCG,+,0.00),-14(CTCCATGGCGAC,-,0.00) 34(GCTCCGCCGC,-,0.00),210(GCATCGCCGC,-,0.00) 561_WT_peak_5943 chr5 137879231 137879687 + 112 NA promoter-TSS (NM_004730) promoter-TSS (NM_004730) -470 NM_004730 2107 Hs.483494 NM_004730 HPRD:02616 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding 0.065789 0.590810 -22(AGCGGCTT,-,0.00),116(AGAGGCCT,-,0.00) -78(GCCCGACG,-,0.00) -45(CCGCGAAG,-,0.00) 192(GGGGGCTGCCTG,+,0.00) 561_WT_peak_1866 chr12 112856417 112856668 + 112 NA promoter-TSS (NM_002834) promoter-TSS (NM_002834) 6 NM_002834 5781 Hs.506852 NM_002834 HPRD:01470 PTPN11 BPTP3|CFC|NS1|PTP-1D|PTP2C|SH-PTP2|SH-PTP3|SHP2 protein tyrosine phosphatase, non-receptor type 11 protein-coding 0.123506 0.662698 -47(GGCGGCCGCG,+,0.00) -78(GGCGTAGA,-,0.00) 42(TCGCTCGG,-,0.00) 40(CGTCGCTC,+,0.00) 64(GAAGCAGGAAGT,+,0.00) -65(AGCGCGCA,+,0.00) 3(GGCGCCTCCGCG,-,0.00),11(CGCGGAGCCCCC,+,0.00) 561_WT_peak_6927 chr8 8777287 8777566 + 112 NA Intergenic AluSz6|SINE|Alu -26295 NM_004225 9258 Hs.379414 NM_004225 HPRD:12010 MFHAS1 LRRC65|MASL1 malignant fibrous histiocytoma amplified sequence 1 protein-coding 0.003584 0.442857 561_WT_peak_1749 chr12 62996119 62997228 + 112 NA promoter-TSS (NR_029661) promoter-TSS (NR_029661) 541 NR_121682 283416 Hs.375881 NM_175895 HPRD:08070 LINC01465 C12orf61 long intergenic non-protein coding RNA 1465 ncRNA 0.106402 0.659459 699(GGAGCAGGGAGG,-,0.00) 424(GGGCCCGGTTTC,+,0.00) 667(CTCGGCCGCA,-,0.00) 689(CCGGGGACTCGG,-,0.00) 39(GGCGGCGA,-,0.00),386(CGCGTCGA,-,0.00),601(TCGGCGCC,+,0.00),603(GGCGCCGA,-,0.00) 382(CGCACGCG,-,0.00) -148(CAAAACCA,+,0.00),820(CGCTTTTG,-,0.00) 68(CGGGCAAA,+,0.00) 827(GCCGCCCA,+,0.00) 420(CGCCGGGCCCGG,-,0.00),558(GCGGAGCCGGCG,+,0.00) 180(GGGCTGATTT,+,0.00) 734(CGTGGCGG,+,0.00) 731(GGACGTGGCGGC,-,0.00) 353(GCAGCGGAGC,+,0.00),718(GCGGCGCAGC,+,0.00),718(GCGGCGCAGC,-,0.00) -65(CAGCCACCCCGC,-,0.00),269(GCGGCCTGGCGG,+,0.00),613(GCGGGCCGGCGG,+,0.00) 561_WT_peak_3121 chr17 33390489 33390866 + 112 NA promoter-TSS (NM_001017368) promoter-TSS (NM_001017368) 82 NM_001017368 117584 Hs.13680 NM_057178 HPRD:11489 RFFL CARP-2|CARP2|FRING|RIFIFYLIN|RNF189|RNF34L ring finger and FYVE-like domain containing E3 ubiquitin protein ligase protein-coding 0.015915 0.452381 7(AGGTCGCT,+,0.00),55(AGCGGCTT,-,0.00) 77(TGGTGCCG,+,0.00) 131(TTTACCCA,-,0.00) 561_WT_peak_3103 chr17 28443807 28444114 + 112 NA promoter-TSS (NR_029945) promoter-TSS (NR_029945) 135 NM_032141 84081 Hs.462663 NM_032141 HPRD:08536 NSRP1 CCDC55|HSPC095|NSrp70 nuclear speckle splicing regulatory protein 1 protein-coding 0.071661 0.551948 -104(GATTCCGGGCAG,-,0.00) -100(CCGGGCAGGCAG,-,0.00) -143(GGCGTCGG,-,0.00) 23(TAGAGACG,-,0.00) -141(CGTCGGCC,+,0.00) 29(CGGGAAAA,+,0.00),79(TTTTCCCG,-,0.00) 561_WT_peak_846 chr10 3824847 3825505 + 112 NA intron (NM_001300, intron 1 of 3) intron (NM_001300, intron 1 of 3) 2297 NM_001300 1316 Hs.4055 NM_001300 HPRD:03632 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel-like factor 6 protein-coding 0.016717 0.496206 -31(GGCATCGA,-,0.00) 561_WT_peak_3396 chr17 80255327 80255554 + 112 NA Intergenic Intergenic 20040 NM_006137 924 Hs.36972 NM_006137 HPRD:01732 CD7 GP40|LEU-9|TP41|Tp40 CD7 molecule protein-coding 0.061674 0.596491 -92(CCCGCGGC,-,0.00) -110(GTCAGACG,-,0.00) 561_WT_peak_2619 chr15 93426380 93426846 + 112 NA promoter-TSS (NR_037602) promoter-TSS (NR_037602) 87 NR_037602 100507217 Hs.622504 NR_037600 ENSG00000272888 LOC100507217 - uncharacterized LOC100507217 ncRNA 0.098712 0.672377 155(CCGGGAAAGGGG,-,0.00) 134(TCGTCGCC,+,0.00),204(GGCGTGGA,-,0.00) 11(GGGCCGGCTCTC,-,0.00) -40(CGGGCCGGGC,-,0.00) 120(GGCGGGGG,+,0.00) 170(CGGGTGAA,+,0.00),249(AGGGTAAA,+,0.00) -148(CGGTGGCCGCGC,-,0.00) 83(CGCGGGGCCCCG,+,0.00) 53(CCGAGTCG,-,0.00) -32(GCCTCGCCGC,-,0.00),89(GCCCCGCTGC,-,0.00),94(GCTGCAGAGC,+,0.00) 86(GGGGCCCCGCTG,+,0.00) 561_WT_peak_3597 chr19 6590909 6591239 + 112 NA promoter-TSS (NM_001252) promoter-TSS (NM_001252) 89 NM_001252 970 Hs.501497 NM_001252 HPRD:18515 CD70 CD27L|CD27LG|TNFSF7 CD70 molecule protein-coding 0.084848 0.676737 22(GCCCCCTCCCGG,+,0.00),23(CCCCCTCCCGGG,+,0.00) 42(GGCGTCTA,-,0.00) 108(AGGGGAGGGA,-,0.00) -127(AAAGCAGCCC,-,0.00) -3(CCGAGAAG,-,0.00) -63(GCATCGCCGC,-,0.00) 561_WT_peak_4639 chr20 42286128 42286425 + 112 NA Intergenic CpG -9383 NM_002466 4605 Hs.179718 NM_002466 HPRD:03247 MYBL2 B-MYB|BMYB v-myb avian myeloblastosis viral oncogene homolog-like 2 protein-coding 0.101010 0.704698 92(GGCGGCGA,-,0.00) 2(GCTGCCATGGAG,+,0.00) -93(GCGGGCCGCCTG,+,0.00) 561_WT_peak_1325 chr11 62623458 62623819 + 112 NA promoter-TSS (NR_002565) promoter-TSS (NR_002565) 154 NM_002394 6520 Hs.502769 NM_002394 HPRD:01148 SLC3A2 4F2|4F2HC|4T2HC|CD98|CD98HC|MDU1|NACAE solute carrier family 3 (amino acid transporter heavy chain), member 2 protein-coding 0.080332 0.624309 -133(CAGGGAAGGAGG,-,0.00) -122(GGCGTAGA,-,0.00) -47(CCGACCGC,+,0.00) -94(CGGCGCGA,-,0.00),154(TCGTGTCG,+,0.00) -71(GTCCTACG,-,0.00) 561_WT_peak_518 chr1 150584174 150584403 + 111 NA Intergenic Intergenic 17321 NM_207045 2029 Hs.632456 NM_004436 HPRD:11927 ENSA ARPP-19e endosulfine alpha protein-coding 0.013100 0.486957 45(CCTCTTCCTCCG,-,0.00) -113(CCCTCCCAGCAC,+,0.00) 561_WT_peak_4279 chr2 120934424 120934999 + 111 NA 3' UTR (NM_001184937, exon 24 of 24) 3' UTR (NM_001184937, exon 24 of 24) 46273 NM_024121 79134 Hs.376722 NM_024121 TMEM185B FAM11B transmembrane protein 185B protein-coding 0.024348 0.508681 46(CCGACAGA,+,0.00),375(TCGGACGG,-,0.00) 340(GCCGGGGG,+,0.00) 171(GGGCTGAGGTGG,-,0.00) 373(CCTCGGAC,+,0.00) 97(GCTGCCATGCGC,+,0.00) 561_WT_peak_4313 chr2 136499661 136499941 + 111 NA intron (NM_014607, intron 1 of 12) CpG 612 NM_014607 23190 Hs.591242 NM_014607 HPRD:18254 UBXN4 UBXD2|UBXDC1|erasin UBX domain protein 4 protein-coding 0.100000 0.736655 -44(GCGCCCTGCTCC,+,0.00) 17(GCTGCCGGCCCG,-,0.00),96(GCAGCCGGGCCG,-,0.00),101(CGGGCCGGAGGC,+,0.00) -85(CTCCGCCGCC,-,0.00) -162(CCGCCCTCCCCG,+,0.00),39(GCGCCTCCCCGG,+,0.00) 9(AGGCCCGGGC,-,0.00) 84(CTGCGTCTCCCG,-,0.00) 70(GCCTGGCCCCAC,-,0.00),99(GCCGGGCCGGAG,+,0.00) -153(CCGAGACG,-,0.00) 97(CAGCCGGGCCGG,-,0.00) 561_WT_peak_392 chr1 114355085 114355395 + 111 NA promoter-TSS (NM_018364) promoter-TSS (NM_018364) -170 NM_018364 54665 Hs.486285 NM_018364 HPRD:08561 RSBN1 ROSBIN round spermatid basic protein 1 protein-coding 0.087097 0.559486 -110(CCGCGCCCCCGC,+,0.00),-99(CCGCGTCCCCGG,+,0.00) -61(CGTGCGCG,-,0.00) -105(CCCCCGCC,-,0.00) 86(TTTACACG,-,0.00) -143(GCCGCGCA,+,0.00),-111(GCCGCGCC,+,0.00),-20(TGGGCGGT,-,0.00) -39(GCTGCGACGC,+,0.00) 561_WT_peak_6561 chr7 10025 10237 + 111 NA Intergenic (CCCTAA)n|Simple_repeat|Simple_repeat -139587 NR_108065 100507642 Hs.557780 NR_108064 LOC100507642 - uncharacterized LOC100507642 ncRNA 0.000000 0.483568 561_WT_peak_1897 chr12 122110031 122110466 + 111 NA Intergenic AluJr|SINE|Alu -2688 NM_173855 283385 Hs.434154 NM_173855 HPRD:17330 MORN3 - MORN repeat containing 3 protein-coding 0.039080 0.573394 59(TGCGCGGG,-,0.00) -155(AAGTCGGCCC,-,0.00) -116(CGGCCTGGCGGC,-,0.00),-108(CGGCATGGGGGC,-,0.00),28(GGGCATGGTGGC,-,0.00) -117(CCGGCCTGGCGG,+,0.00) 561_WT_peak_5975-2 chr5 145562709 145562730 + 111 NA promoter-TSS (NM_020117) promoter-TSS (NM_020117) -425 NM_020117 51520 Hs.432674 NM_020117 HPRD:01042 LARS HSPC192|LARS1|LEURS|LEUS|LFIS|LRS|PIG44|RNTLS|hr025Cl leucyl-tRNA synthetase protein-coding 0.095238 0.681818 561_WT_peak_1879 chr12 120639110 120639540 + 111 NA promoter-TSS (NM_001002) promoter-TSS (NM_001002) 231 NR_038924 100506649 Hs.569205 NR_038924 ENSG00000255857 PXN-AS1 EyeLinc4 PXN antisense RNA 1 ncRNA 0.060465 0.559165 94(CCGCCTCCCGGG,+,0.00) -122(GGGCTGGAGCTG,-,0.00) 197(TAGAGACG,-,0.00) 258(CCGCCTCG,-,0.00) 561_WT_peak_3278 chr17 57864176 57864325 + 111 NA intron (NM_030938, intron 7 of 11) intron (NM_030938, intron 7 of 11) -54377 NR_029493 406991 Hs.444569 NR_029493 miRBase:MI0000077 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA 0.006711 0.346667 561_WT_peak_3097 chr17 27276336 27276562 + 111 NA intron (NM_001290131, intron 2 of 10) CpG 2059 NM_001033561 57649 Hs.444173 NM_020889 HPRD:15123 PHF12 PF1 PHD finger protein 12 protein-coding 0.044248 0.546256 561_WT_peak_3064 chr17 18684455 18684804 + 111 NA promoter-TSS (NM_016078) promoter-TSS (NM_016078) 47 NM_016078 51030 Hs.87295 NM_016078 HPRD:13293 TVP23B FAM18B|FAM18B1|NPD008|YDR084C trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) protein-coding 0.077364 0.691429 115(GGCGGCCGGG,+,0.00) 28(TGGCGGCT,+,0.00),173(AGGCCGCT,+,0.00) 73(CCGCGTCCCCCG,+,0.00) -68(CCCGTACG,+,0.00),-66(CGTACGCT,-,0.00) 59(CGTGGGAC,+,0.00) -18(GCCGCCATGTTG,+,0.00) 561_WT_peak_6552 chr6 167364728 167365075 + 111 NA intron (NM_003730, intron 2 of 8) LTR13|LTR|ERVK 5176 NM_003730 8635 Hs.529989 NM_003730 HPRD:10197 RNASET2 RNASE6PL|bA514O12.3 ribonuclease T2 protein-coding 0.017291 0.545977 561_WT_peak_2750 chr16 27378743 27379125 + 111 NA Intergenic Intergenic -34549 NM_181079 50615 Hs.210546 NM_021798 IL21R CD360|NILR interleukin 21 receptor protein-coding 0.036649 0.428198 -121(AAGTGGCT,+,0.00) 561_WT_peak_2149 chr14 24701733 24702015 + 111 NA promoter-TSS (NM_006156) promoter-TSS (NM_006156) -204 NM_001002002 51292 Hs.368855 NM_016576 HPRD:13590 GMPR2 - guanosine monophosphate reductase 2 protein-coding 0.074468 0.607774 -110(TCGTGCCA,+,0.00) -3(CCCTGCCGCCGC,-,0.00) 561_WT_peak_5640 chr4 174255174 174255538 + 111 NA promoter-TSS (NM_001130689) promoter-TSS (NM_001130689) 153 NM_001130688 3148 Hs.434953 NM_002129 HMGB2 HMG2 high mobility group box 2 protein-coding 0.085165 0.638356 -92(TCCGCCTCCTCC,+,0.00) -29(ATGCCGCT,+,0.00),134(AGACGCTT,-,0.00) -91(CCGCCTCCTCCG,-,0.00) -119(CAGAACCG,+,0.00) 14(CCGAGTAG,-,0.00) 561_WT_peak_3161 chr17 37969903 37970174 + 111 NA intron (NM_001257409, intron 2 of 5) intron (NM_001257409, intron 2 of 5) -35560 NM_001284516 22806 Hs.371680 NM_012481 IKZF3 AIO|AIOLOS|ZNFN1A3 IKAROS family zinc finger 3 (Aiolos) protein-coding 0.018450 0.444853 -127(CTTACCCG,-,0.00) 561_WT_peak_1174 chr11 175588 175913 + 111 NA Intergenic (CCCTAA)n|Simple_repeat|Simple_repeat -17330 NM_001097610 653486 Hs.127059 NM_001097610 LOC653486 - secretoglobin, family 1C, member 1-like protein-coding 0.009231 0.506135 561_WT_peak_5117 chr3 51429169 51429447 + 111 NA exon (NM_013286, exon 1 of 1) exon (NM_013286, exon 1 of 1) 609 NM_013286 29890 Hs.118738 NM_013286 HPRD:11486 RBM15B HUMAGCGB|OTT3 RNA binding motif protein 15B protein-coding 0.122302 0.713262 3(TCAGCCTCCGCC,+,0.00) 99(TGGCCCGGCAGC,+,0.00) -162(CTCTGCCGCC,-,0.00) 73(CGCACGCG,-,0.00) -103(GCCGCGCC,+,0.00) 96(CCCTGGCCCGGC,-,0.00) -135(GGGCCGAGCC,+,0.00) 92(CACGCCCTGGCC,+,0.00) 561_WT_peak_3874 chr19 51014442 51014731 + 111 NA promoter-TSS (NM_001270641) promoter-TSS (NM_001270641) 26 NM_001270640 126119 Hs.467151 NM_138334 HPRD:15297 JOSD2 - Josephin domain containing 2 protein-coding 0.121107 0.682759 -133(CTGGGCAGGCGG,-,0.00) 73(CGCATACG,+,0.00) 21(TCCGTCGG,-,0.00) -91(CGCCGGAC,+,0.00),-10(CGTCGGGC,+,0.00),23(CGTCGGGC,+,0.00) -147(CAACACCG,+,0.00) 81(GCCGCGCC,+,0.00) -157(GCGGGGCGGGCA,+,0.00) -34(GGGCCGCGTG,+,0.00) 29(GCTCCGCGGC,-,0.00) -39(CGCCCGGGCCGC,-,0.00) 561_WT_peak_5975 chr5 145561830 145562510 + 111 NA 5' UTR (NM_020117, exon 1 of 32) 5' UTR (NM_020117, exon 1 of 32) 124 NM_020117 51520 Hs.432674 NM_020117 HPRD:01042 LARS HSPC192|LARS1|LEURS|LEUS|LFIS|LRS|PIG44|RNTLS|hr025Cl leucyl-tRNA synthetase protein-coding 0.048529 0.541850 -82(AAGTCTCT,+,0.00) 137(CCTCCCTCTCGG,+,0.00) 337(TCTACCCG,-,0.00),478(TTCACCCG,-,0.00) 66(ACCGCCCA,+,0.00) 561_WT_peak_397 chr1 115054094 115054350 + 111 NA promoter-TSS (NM_015906) promoter-TSS (NM_015906) -441 NM_033020 51592 Hs.26837 NM_015906 HPRD:10423 TRIM33 ECTO|PTC7|RFG7|TF1G|TIF1G|TIF1GAMMA|TIFGAMMA tripartite motif containing 33 protein-coding 0.082031 0.548638 -133(GGTTCCGGTCCC,-,0.00) 23(TGGTTTTG,-,0.00) -82(GCCGCGCC,+,0.00) -106(GGCGTCTCCGCG,-,0.00) 561_WT_peak_434 chr1 144908266 144908601 + 111 NA intron (NM_001002811, intron 13 of 18) intron (NM_001002811, intron 13 of 18) 23932 NM_001002811 9659 Hs.584841 NM_014644 HPRD:10482 PDE4DIP CMYA2|MMGL phosphodiesterase 4D interacting protein protein-coding 0.002985 0.327381 -78(AAAACAGGAAGA,+,0.00) 561_WT_peak_2879 chr16 68482576 68482788 + 111 NA promoter-TSS (NM_018667) promoter-TSS (NM_018667) -273 NM_018667 55512 Hs.368421 NM_018667 HPRD:16154 SMPD3 NSMASE2 sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II) protein-coding 0.084906 0.629108 -24(GGAGCAGGGCGG,-,0.00) -87(GCCGCGGG,+,0.00) -35(CACGGAGGCGCG,+,0.00),-27(CGCGGAGCAGGG,+,0.00) 561_WT_peak_2325 chr14 90863283 90863629 + 111 NA 5' UTR (NM_006888, exon 1 of 6) 5' UTR (NM_006888, exon 1 of 6) 129 NM_006888 801 Hs.282410 NM_006888 HPRD:00241 CALM1 CALML2|CAMI|CPVT4|DD132|PHKD|caM calmodulin 1 (phosphorylase kinase, delta) protein-coding 0.135838 0.706052 -143(AGGCGGCT,+,0.00),39(AGCGGCAT,-,0.00) -52(TGGACGCC,+,0.00) 132(TAGGTCGG,-,0.00) 55(CCCCCGCC,-,0.00) -46(CCGTGCCG,+,0.00) 61(CCGTCGCAGCCC,+,0.00) -12(GCGGCGGCGGCG,+,0.00),65(CGCAGCCCCCGC,-,0.00) -157(CGCCGCTCTGCG,-,0.00),-142(GGCGGCTCCGCC,-,0.00) -145(CGAGGCGG,+,0.00) -138(GCTCCGCCGC,-,0.00),-24(GCGGCGGCGC,+,0.00),61(CCGTCGCAGC,-,0.00) 561_WT_peak_7024 chr8 56686036 56686265 + 111 NA promoter-TSS (NM_001286661) promoter-TSS (NM_001286661) -184 NM_001286661 137695 Hs.420076 NM_152417 HPRD:08128 TMEM68 - transmembrane protein 68 protein-coding 0.091703 0.608696 -55(TGCGTACG,+,0.00) -154(GCCGCGGG,+,0.00) -9(AGTGGAGCCGCG,+,0.00) 1(CGTGGCGG,+,0.00) 561_WT_peak_3615 chr19 10305277 10305584 + 111 NA intron (NM_001379, intron 1 of 39) CpG 325 NM_001379 1786 Hs.202672 NM_001379 HPRD:00532 DNMT1 ADCADN|AIM|CXXC9|DNMT|HSN1E|MCMT DNA (cytosine-5-)-methyltransferase 1 protein-coding 0.120521 0.737013 -125(CCGGGCACGCGC,-,0.00) 110(GGGCTGGGGCGG,-,0.00) 120(GGTACGCG,-,0.00) 68(CGTCGGGC,+,0.00) 7(GCGCCCTGCCTG,+,0.00) 561_WT_peak_831 chr1 245027867 245028186 + 111 NA promoter-TSS (NM_004501) promoter-TSS (NM_004501) -199 NM_031844 3192 Hs.106212 NM_004501 HPRD:04185 HNRNPU HNRPU|SAF-A|U21.1|hnRNP U heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) protein-coding 0.084639 0.603125 -49(GAACCCGGGCCG,-,0.00) -40(CCGAGAGCGCGG,-,0.00) -43(GGGCCGAGAGCG,-,0.00) -126(ACTGCGCA,+,0.00),-23(GCCGCGCA,+,0.00) 108(CCTTCCCAGC,-,0.00) 561_WT_peak_5277 chr3 141217727 141218026 + 110 NA intron (NM_006506, intron 1 of 23) intron (NM_006506, intron 1 of 23) 11950 NM_006506 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding 0.013378 0.416667 -9(AGACACTT,-,0.00) -89(CAAAACTG,+,0.00) -82(GAAACCGGAAGT,+,0.00) 561_WT_peak_2353 chr14 97925048 97925702 + 110 NA intron (NR_110166, intron 1 of 4) UCON31|Unknown|Unknown 222 NR_110166 101929241 Hs.650839 NR_110165 ENSG00000246084 LOC101929241 - uncharacterized LOC101929241 ncRNA 0.045872 0.560305 197(CGAGGAGGGCGC,-,0.00) -120(GCTTCCGGGCTC,-,0.00) -160(TAGCGTCT,+,0.00) 214(CGTCGCTT,+,0.00) -53(GGATCCGCCC,-,0.00) 176(CCGCCAAG,-,0.00) -19(GCAGCCATGGGA,+,0.00) -94(CAGCCGGGCCTC,-,0.00) 561_WT_peak_4082 chr2 61192307 61192575 + 110 NA intron (NM_144709, intron 7 of 17) intron (NM_144709, intron 7 of 17) -52371 NM_002618 5194 Hs.161377 NM_002618 HPRD:03475 PEX13 NALD|PBD11A|PBD11B|ZWS peroxisomal biogenesis factor 13 protein-coding 0.007463 0.364312 561_WT_peak_4087 chr2 61698508 61698969 + 110 NA promoter-TSS (NM_014709) promoter-TSS (NM_014709) -889 NM_014709 9736 Hs.644708 NM_014709 HPRD:11665 USP34 - ubiquitin specific peptidase 34 protein-coding 0.078091 0.636364 89(GGTGCCGGGCCG,-,0.00) -110(GGCGTCGC,-,0.00),103(TCTACGCC,+,0.00) -66(GAGCGCCAGGTC,+,0.00) -1(TGGGTCGG,-,0.00) -38(CCCCCGCC,-,0.00) 36(CGGCCTCTTCCG,-,0.00) 148(GGTCTGAGAGTG,-,0.00) 95(GGGCCGGGTC,+,0.00) 561_WT_peak_3942 chr19 59087082 59087379 + 110 NA intron (NR_026052, intron 1 of 1) CpG 464 NR_026052 65996 Hs.541177 NM_023939 HPRD:14527 CENPBD1P1 - CENPBD1 pseudogene 1 pseudo 0.077441 0.630872 -5(GCCCGGCCCT,+,0.00) -6(CGCCCGGC,-,0.00) -155(CCTTCGGCGGCC,-,0.00) -85(ACTGCGCA,+,0.00) 21(CTTCTCGG,+,0.00) 561_WT_peak_6596 chr7 12250980 12251344 + 110 NA intron (NM_001134232, intron 1 of 7) CpG 314 NM_018374 54664 Hs.396358 NM_018374 TMEM106B - transmembrane protein 106B protein-coding 0.087912 0.690411 1(AGGCCGCT,+,0.00) -100(GCGTGCCG,+,0.00),192(TCTTGCCG,+,0.00) -115(ACTGCGCA,+,0.00),-113(TGCGCAGC,-,0.00) -141(CCCTGTCCGCGC,-,0.00),14(GCTGGGCCAGCC,+,0.00) -37(GCTGCGCCGC,+,0.00),-37(GCTGCGCCGC,-,0.00) 561_WT_peak_775 chr1 228757119 228757376 + 110 NA Intergenic CpG -23147 NR_037962 58480 Hs.647774 NM_021205 HPRD:06965 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding 0.073930 0.616279 64(GCCCGGCCCG,+,0.00) 63(AGCCCGGCCC,-,0.00) 39(GGCGCCTGGCTG,+,0.00),66(CCGGCCCGGCCG,+,0.00) 561_WT_peak_553 chr1 155903936 155904133 + 110 NA intron (NM_014949, intron 1 of 13) intron (NM_014949, intron 1 of 13) 154 NM_014949 22889 Hs.24656 NM_014949 HPRD:17198 KIAA0907 BLOM7 KIAA0907 protein-coding 0.060914 0.646465 22(CGTACCCG,-,0.00) -153(CCCTCGGATCCC,-,0.00) 561_WT_peak_1264 chr11 44087470 44087997 + 110 NA promoter-TSS (NM_032592) promoter-TSS (NM_032592) 4 NM_001127219 84680 Hs.126706 NM_032592 HPRD:10524 ACCS ACS|PHACS 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional) protein-coding 0.079696 0.651515 -115(CGGCCCGGCGGC,+,0.00) -106(GGCGGCCCAG,+,0.00) 270(AAGCCGTT,+,0.00),304(AAGCCTCT,+,0.00) 334(GGCGCCGA,-,0.00) 145(CGCGTAAG,+,0.00) 200(CCCACCGA,+,0.00) 20(CCCCCGCC,-,0.00) -119(GACCCGGCCC,-,0.00) 232(CCGCCAAG,-,0.00) -116(CCGGCCCGGCGG,+,0.00) 561_WT_peak_6393 chr6 90007719 90008040 + 110 NA intron (NM_002043, intron 2 of 8) intron (NM_002043, intron 2 of 8) 17139 NM_002043 2570 Hs.719891 NM_002043 HPRD:15922 GABRR2 - gamma-aminobutyric acid (GABA) A receptor, rho 2 protein-coding 0.018692 0.450311 -29(GGCGTCAA,-,0.00) 561_WT_peak_7599 chrX 106871725 106872064 + 110 NA exon (NM_002764, exon 1 of 7) exon (NM_002764, exon 1 of 7) 240 NM_002764 5631 Hs.56 NM_002764 HPRD:02413 PRPS1 ARTS|CMTX5|DFN2|DFNX1|PPRibP|PRS-I|PRSI phosphoribosyl pyrophosphate synthetase 1 protein-coding 0.056047 0.573529 -96(GACTTCGGTTCC,-,0.00) 134(GGCGGCAGAG,+,0.00) -159(GCCGGGCG,+,0.00) -132(TAGCAACG,-,0.00) 561_WT_peak_1359 chr11 65268295 65268561 + 110 NA non-coding (NR_002819, exon 1 of 1) non-coding (NR_002819, exon 1 of 1) 3195 NR_002819 378938 Hs.621695 NR_002819 ENSG00000251562 MALAT1 HCN|LINC00047|MALAT-1|NCRNA00047|NEAT2|PRO2853|mascRNA metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) ncRNA 0.018797 0.382022 30(TTTACACG,-,0.00) -99(AGGCCGATTT,+,0.00) 561_WT_peak_762 chr1 227953977 227954290 + 110 NA intron (NM_053052, intron 3 of 4) intron (NM_053052, intron 3 of 4) -31021 NM_001161465 65094 Hs.555974 NM_023007 HPRD:07774 JMJD4 - jumonji domain containing 4 protein-coding 0.025559 0.621019 -23(AGGTGGCT,+,0.00) -48(TCTGCGGAGC,+,0.00) 561_WT_peak_7067 chr8 90996223 90996881 + 110 NA intron (NM_002485, intron 1 of 15) CpG 347 NM_002485 4683 Hs.492208 NM_002485 HPRD:04050 NBN AT-V1|AT-V2|ATV|NBS|NBS1|P95 nibrin protein-coding 0.089666 0.641882 94(CTGGGAGGGAGG,-,0.00),258(CAGCGTCCCCGG,+,0.00) 418(GGGCTGGGGCCG,-,0.00) 229(CGTACTCG,-,0.00),277(CGGACGCG,-,0.00) 402(TCGGTCCG,-,0.00),480(GCGGTCGG,-,0.00) 13(GCCGGGGG,+,0.00),377(CCCGCGGC,-,0.00) 9(TCCTGCCG,+,0.00),367(TCCTGCCG,+,0.00) 319(AGTCGCTA,+,0.00) 91(AGGCTGGGAGGG,-,0.00) 425(GGCCGACG,-,0.00) -93(CAAAACTG,+,0.00) 44(CTTACCCG,-,0.00),328(CGGGAAAA,+,0.00) 371(GCCGGGCCCGCG,+,0.00) 333(AAATAGGCCC,-,0.00) 561_WT_peak_3569 chr19 2289868 2290116 + 110 NA 3' UTR (NM_001101391, exon 2 of 2) 3' UTR (NM_001101391, exon 2 of 2) -7811 NM_198532 374872 Hs.511803 NM_198532 HPRD:12707 C19orf35 - chromosome 19 open reading frame 35 protein-coding 0.100806 0.682731 73(CCCGCGGC,-,0.00) 51(CCGAGAAG,-,0.00) -5(GCCTCCCTGGCC,+,0.00) -83(CGGCCGGCCCGC,-,0.00) 561_WT_peak_1840 chr12 108079220 108079439 + 110 NA promoter-TSS (NM_007062) promoter-TSS (NM_007062) -261 NM_007062 11137 Hs.506652 NM_007062 HPRD:11464 PWP1 IEF-SSP-9502 PWP1 homolog (S. cerevisiae) protein-coding 0.018265 0.436364 561_WT_peak_7059 chr8 80942251 80942523 + 110 NA exon (NM_014018, exon 1 of 3) exon (NM_014018, exon 1 of 3) 119 NM_014018 28957 Hs.521124 NM_014018 HPRD:10097 MRPS28 MRP-S28|MRP-S35|MRPS35 mitochondrial ribosomal protein S28 protein-coding 0.077206 0.608059 30(CTCGGCAGCC,-,0.00) 49(GTCCGACA,-,0.00) -88(CGAAACCG,+,0.00) 61(GCCGCCATGACT,+,0.00) 561_WT_peak_6074 chr6 711167 711372 + 110 NA Intergenic CpG -18128 NM_018303 55770 Hs.484412 NM_018303 HPRD:11544 EXOC2 SEC5|SEC5L1|Sec5p exocyst complex component 2 protein-coding 0.068293 0.650485 -106(TCGGTGGG,-,0.00) 32(AGGGCCGGGC,-,0.00) -153(CGCTTTTG,-,0.00) 561_WT_peak_5066 chr3 40494270 40494729 + 110 NA intron (NR_040100, intron 1 of 3) CpG 300 NR_040100 285266 Hs.619663 NR_040100 ENSG00000223797 ENTPD3-AS1 - ENTPD3 antisense RNA 1 ncRNA 0.054466 0.582609 -20(TCGACGCC,+,0.00) -11(GCCCAGCCCT,+,0.00) -71(GCCGCGGG,+,0.00) -91(CCCTCGCATCCC,+,0.00),-14(CCCGCCCAGCCC,+,0.00) 34(GGCGCGGC,-,0.00) 561_WT_peak_6898 chr7 150361043 150361275 + 110 NA Intergenic Intergenic -21635 NM_015660 26157 Hs.647071 NM_015660 HPRD:16279 GIMAP2 HIMAP2|IAN12|IMAP2 GTPase, IMAP family member 2 protein-coding 0.000000 0.454936 -58(CAGGTAAA,+,0.00) 40(GCTGAGAGGC,+,0.00) 561_WT_peak_1202 chr11 9335952 9336297 + 109 NA non-coding (NR_028491, exon 1 of 8) non-coding (NR_028491, exon 1 of 8) 191 NM_015012 440026 Hs.594563 NM_015012 HPRD:18632 TMEM41B - transmembrane protein 41B protein-coding 0.110145 0.682081 -31(AGCCACTT,-,0.00) -154(TCGTTCGG,-,0.00) -22(CGGCGCGA,-,0.00),72(CCGTGCCG,+,0.00),98(TCGCGCCG,+,0.00) -96(GCCGCGCC,+,0.00) -102(TGCGGTGCCGCG,+,0.00) 63(AACCCCGCCC,-,0.00) -5(CCGAGACG,-,0.00) -133(CGCCATGGCTGC,-,0.00) 561_WT_peak_6832 chr7 127032143 127032626 + 109 NA 5' UTR (NM_176814, exon 1 of 6) 5' UTR (NM_176814, exon 1 of 6) 383 NM_176814 168850 Hs.159006 NM_176814 HPRD:14112 ZNF800 - zinc finger protein 800 protein-coding 0.122153 0.735537 145(GGAGCCGGAACC,+,0.00) -142(GGCGGCCGCG,+,0.00) -114(AGGCGGCT,+,0.00) -146(GCCGGGCG,+,0.00),-138(GCCGCGGG,+,0.00),112(CGCCCGGC,-,0.00) -52(GCCCGACG,-,0.00) -135(GCGGGGACAGCC,+,0.00) 22(CCGAGACG,-,0.00),69(CTAGGCGG,+,0.00) -153(AAGGCAGGCCGG,-,0.00) 561_WT_peak_3102 chr17 28033435 28033760 + 109 NA intron (NM_001282130, intron 2 of 7) intron (NM_001282130, intron 2 of 7) 54853 NM_001282131 85464 Hs.654754 NM_033389 HPRD:09487 SSH2 SSH-2|SSH-2L slingshot protein phosphatase 2 protein-coding 0.006154 0.398773 561_WT_peak_2544 chr15 72667976 72668791 + 109 NA promoter-TSS (NR_027262) promoter-TSS (NR_027262) -71 NR_027262 80072 Hs.591113 NM_025005 ENSG00000260339 HEXA-AS1 C15orf34 HEXA antisense RNA 1 ncRNA 0.074847 0.628676 -57(AGACCCGGAACC,+,0.00) 12(CGCGGCCGAG,+,0.00) 270(AGGCGGCT,+,0.00) 368(GGCGTCGG,-,0.00) 364(GCCGGGCG,+,0.00) 360(TTGTGCCG,+,0.00),443(CCGTGCCG,+,0.00) -90(GTCCGACT,-,0.00) 51(CGGGTAAA,+,0.00) 10(TGCGCGGC,-,0.00) 271(GGCGGCTCTGCG,-,0.00) 476(CCGACTCG,-,0.00) 441(GGCCGTGCCGGC,-,0.00) 8(GCTGCGCGGC,+,0.00) 0(GCAGCCGGGCTG,+,0.00),1(CAGCCGGGCTGC,-,0.00),13(GCGGCCGAGCTG,+,0.00) 561_WT_peak_4090 chr2 61991582 61991934 + 109 NA Intergenic CpG 89520 NR_037710 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 family with sequence similarity 161, member A protein-coding 0.082386 0.603399 22(AGGGCGGGGA,-,0.00) 23(GGGCGGGGAGGG,-,0.00) 79(CGAAACCG,+,0.00) -138(CGCGTAAA,+,0.00),56(GGGGTAAA,+,0.00) -70(CGTGGCGG,+,0.00) 561_WT_peak_6206 chr6 27559555 27559730 + 109 NA Intergenic tRNA-Lys-AAA|tRNA|tRNA -102172 NR_038293 100507173 Hs.635987 NR_038292 LINC01012 - long intergenic non-protein coding RNA 1012 ncRNA 0.011429 0.431818 -72(CCGACTGA,+,0.00) 561_WT_peak_6831 chr7 121170349 121170891 + 109 NA Intergenic MLT1I|LTR|ERVL-MaLR -134198 NM_001040020 10447 Hs.434053 NM_014888 HPRD:12270 FAM3C ILEI family with sequence similarity 3, member C protein-coding 0.007380 0.395948 203(CAAAACAG,+,0.00) 204(AAAACAGGAAAC,+,0.00),211(GAAACAGTAAAC,+,0.00) 561_WT_peak_6658 chr7 44613302 44613561 + 109 NA intron (NM_019082, intron 1 of 13) CpG 706 NM_019082 54606 Hs.654762 NM_019082 HPRD:12154 DDX56 DDX21|DDX26|NOH61 DEAD (Asp-Glu-Ala-Asp) box helicase 56 protein-coding 0.108108 0.653846 -15(TCGAGGCC,+,0.00),0(TCGAAGCC,+,0.00) 51(CGCACGCG,-,0.00) -80(GGCGCGCCCCGC,-,0.00) -53(GCTCCCCAGC,-,0.00) 561_WT_peak_4002 chr2 27886596 27886982 + 109 NA promoter-TSS (NM_001282731) promoter-TSS (NM_001282731) -82 NM_001282731 9913 Hs.6232 NM_014860 HPRD:18115 SUPT7L SPT7L|STAF65|STAF65(gamma)|STAF65G|SUPT7H suppressor of Ty 7 (S. cerevisiae)-like protein-coding 0.056995 0.576227 -89(TCGCCGCC,+,0.00),54(GGCGTCGC,-,0.00) 56(CGTCGCAA,+,0.00) 561_WT_peak_3974 chr2 15731954 15732329 + 109 NA intron (NM_004939, intron 1 of 25) CpG 396 NM_004939 1653 Hs.440599 NM_004939 HPRD:03158 DDX1 DBP-RB|UKVH5d DEAD (Asp-Glu-Ala-Asp) box helicase 1 protein-coding 0.106667 0.702128 -148(GGGGCCGGAAGC,+,0.00) 117(GGCGGCCGCG,+,0.00) -112(TCAGTCGG,-,0.00) 34(AGGGGCGGGA,-,0.00) 8(CCCTGGGGCCGC,-,0.00) -87(GGCGAAGCCGCG,+,0.00) 561_WT_peak_6619 chr7 25019308 25019739 + 109 NA 5' UTR (NM_015550, exon 1 of 23) 5' UTR (NM_015550, exon 1 of 23) 308 NM_015550 26031 Hs.520259 NM_015550 HPRD:09474 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding 0.111369 0.747685 -83(GACCCCGGTCCG,-,0.00) -107(GAGCCTCCCCGG,+,0.00) 96(CAGAACCG,+,0.00) 225(GCTGCGCA,+,0.00) 209(GCGGGGCCGGAG,+,0.00) -62(CGCGGCGCCCCG,+,0.00),-62(CGCGGCGCCCCG,-,0.00),214(GCCGGAGCCGCG,+,0.00) 72(GGGCCGGGCT,+,0.00) -94(CGACTCGG,+,0.00),237(CCGCGAAG,-,0.00) -22(GCCGCCAGGCCC,+,0.00) -27(GCGCCGCCGC,-,0.00),236(GCCGCGAAGC,+,0.00) -21(CCGCCAGGCCCC,-,0.00),-5(CACCCAGGCCCC,-,0.00) 561_WT_peak_7164 chr8 134532896 134533081 + 109 NA intron (NM_173344, intron 2 of 9) L1ME4a|LINE|L1 51195 NM_173344 6482 Hs.374257 NM_003033 HPRD:06219 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding 0.021622 0.387097 -86(CAGTTTTG,-,0.00) 561_WT_peak_3096 chr17 27230171 27230368 + 109 NA promoter-TSS (NM_144683) promoter-TSS (NM_144683) -180 NM_144683 147015 Hs.631760 NM_144683 HPRD:14488 DHRS13 SDR7C5 dehydrogenase/reductase (SDR family) member 13 protein-coding 0.030457 0.575758 561_WT_peak_6762 chr7 99063727 99064136 + 109 NA promoter-TSS (NM_001198879) promoter-TSS (NM_001198879) -107 NM_001003714 9551 Hs.521056 NM_004889 HPRD:16520 ATP5J2 ATP5JL ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2 protein-coding 0.051345 0.595122 -54(GGCGTAGA,-,0.00) 233(CCCCCGCC,-,0.00) 236(CCGCCTCG,-,0.00) 561_WT_peak_110 chr1 25251577 25251902 + 109 NA intron (NM_004350, intron 2 of 4) intron (NM_004350, intron 2 of 4) 5031 NM_004350 864 Hs.170019 NM_004350 HPRD:02565 RUNX3 AML2|CBFA3|PEBP2aC runt-related transcription factor 3 protein-coding 0.015385 0.570552 70(CCCCCGCC,-,0.00) -111(AAAGTGGCCC,-,0.00) 561_WT_peak_2760 chr16 28985948 28986278 + 109 NA promoter-TSS (NM_001142448) promoter-TSS (NM_001142448) 17 NM_001142450 83985 Hs.617449 NM_032038 HPRD:11599 SPNS1 HSpin1|LAT|PP2030|SPIN1|SPINL|nrs spinster homolog 1 (Drosophila) protein-coding 0.103030 0.679758 -92(AGAGGCTT,-,0.00),9(TGGCGGCT,+,0.00) 97(TCGTGCCC,+,0.00) 4(CAACATGGCGGC,-,0.00) 28(GCGCCCGGGCTG,+,0.00) 561_WT_peak_1638 chr12 29256479 29256667 + 109 NA Intergenic L2c|LINE|L2 -45363 NM_001271783 55711 Hs.728955 NM_018099 HPRD:14723 FAR2 MLSTD1|SDR10E2 fatty acyl CoA reductase 2 protein-coding 0.021277 0.391534 561_WT_peak_7381 chr9 107753414 107754002 + 109 NA Intergenic Intergenic -63181 NM_005502 19 Hs.659274 NM_005502 HPRD:02501 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP-binding cassette, sub-family A (ABC1), member 1 protein-coding 0.054422 0.592530 -61(CCGCCCGCCGGG,+,0.00) -72(CAGCGCCGGCCC,+,0.00),-27(GTGCGGCAGCCC,+,0.00) -81(CCCCCGCC,-,0.00) -69(CGCCGGCCCCGC,-,0.00) 313(GGCCAGGGTGGC,-,0.00) 561_WT_peak_3733 chr19 36390553 36390625 + 109 NA intron (NM_139239, intron 1 of 11) intron (NM_139239, intron 1 of 11) 963 NM_139239 84807 Hs.466531 NM_139239 HPRD:18140 NFKBID IkappaBNS|TA-NFKBH nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta protein-coding 0.027778 0.589041 561_WT_peak_1280 chr11 47869518 47869879 + 109 NA intron (NM_015231, intron 1 of 35) intron (NM_015231, intron 1 of 35) 359 NM_015231 23279 Hs.744107 NM_015231 HPRD:16254 NUP160 - nucleoporin 160kDa protein-coding 0.058172 0.580110 -32(GATCCCGGGGCT,-,0.00) -54(CGTCGGAC,+,0.00) 561_WT_peak_931 chr10 30315944 30316459 + 109 NA exon (NM_020848, exon 3 of 4) exon (NM_020848, exon 3 of 4) 32287 NM_020848 57608 Hs.533953 NM_020848 ENSG00000165757 KIAA1462 JCAD KIAA1462 protein-coding 0.044660 0.587209 93(AGGTGTCT,+,0.00) 173(CGGGGATGGAGG,-,0.00) 250(CCGACCTA,+,0.00) 79(CGTTGCTA,+,0.00) 8(TGGTTTTG,-,0.00) -32(CCTGGGGCTCCC,-,0.00) 164(AAAGCGGCCC,-,0.00) 197(GTGGCCAGGCTG,+,0.00) 561_WT_peak_2674 chr16 3355496 3355965 + 109 NA promoter-TSS (NM_033208) promoter-TSS (NM_033208) -291 NM_033208 91151 Hs.161287 NM_033208 HPRD:11632 TIGD7 Sancho tigger transposable element derived 7 protein-coding 0.104478 0.693617 84(GCTTCCGGGCCG,-,0.00) -47(AGCGGCCT,-,0.00),-7(AAGCGGCT,+,0.00),-6(AGCGGCTT,-,0.00) 9(GGCTTCGA,-,0.00) -120(GGGCTGGCGGTT,-,0.00) 65(CGTAGGCG,-,0.00) -85(TCGGGCGG,-,0.00) 127(GGGCACGA,-,0.00) 123(CGTCGGGC,+,0.00) 175(GGCGCGGC,-,0.00) 113(GCGGGGCCACCG,+,0.00) -12(CCGAGAAG,-,0.00) 561_WT_peak_5869 chr5 107718095 107718343 + 109 NA promoter-TSS (NM_001163315) promoter-TSS (NM_001163315) -420 NM_001163315 64839 Hs.657225 NM_022824 HPRD:10950 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine-rich repeat protein 17 protein-coding 0.080645 0.646586 -76(TGACTCGGAAAC,+,0.00),36(CGCACCGAAGTC,+,0.00) -54(TCGAAGCC,+,0.00) 71(CGGCACCA,-,0.00) -124(GGGAGCCGCTGG,+,0.00) -12(CGCTGACCGCGC,-,0.00) -45(CGAGGCGG,+,0.00) -49(GCCGCGAGGC,+,0.00) 561_WT_peak_2480 chr15 51057619 51057918 + 109 NA 5' UTR (NM_032802, exon 1 of 15) 5' UTR (NM_032802, exon 1 of 15) 142 NM_032802 84888 Hs.401537 NM_032802 HPRD:09742 SPPL2A IMP3|PSL2 signal peptide peptidase like 2A protein-coding 0.123746 0.773333 5(AGGCTCGGAGTC,+,0.00) 63(GGCGGCCGGG,+,0.00) -138(GCGCCTTCCCGC,+,0.00) -28(CGGCACGG,-,0.00) -163(CCCGCCCAGCCC,+,0.00) -55(CATCGGAC,+,0.00) -113(GGAGCAGGAAGC,+,0.00) 30(GCCTCCGTGGCC,+,0.00) -19(GCGGCGCAGC,+,0.00),-19(GCGGCGCAGC,-,0.00) 561_WT_peak_7060 chr8 81260221 81260450 + 109 NA Intergenic Intergenic 106711 NR_049894 100847056 NR_049894 miRBase:MI0019316 MIR5708 - microRNA 5708 ncRNA 0.004367 0.413043 2(TGGTTTTG,-,0.00) 561_WT_peak_6765 chr7 99155784 99156255 + 109 NA promoter-TSS (NM_024061) promoter-TSS (NM_024061) -26 NM_001085366 79027 Hs.599798 NM_024061 HPRD:11673 ZNF655 VIK|VIK-1 zinc finger protein 655 protein-coding 0.065817 0.633475 -61(TAGGTCGG,-,0.00),-21(TGGGTCGG,-,0.00) -17(TCGGGCCG,+,0.00) 87(TAGAGACG,-,0.00) -151(CCCAGGCCCCGC,-,0.00),176(CGCGGGCCCAGC,-,0.00),177(GCGGGCCCAGCT,+,0.00) 41(GGGGCGCTTT,+,0.00) -153(CACCCAGGCCCC,-,0.00) 561_WT_peak_3527 chr18 67872789 67873297 + 109 NA promoter-TSS (NM_173630) promoter-TSS (NM_173630) -81 NM_173630 25914 Hs.654809 NM_173630 HPRD:11525 RTTN - rotatin protein-coding 0.092520 0.620825 231(CGCGCACG,+,0.00) -57(TCGTCCCG,+,0.00) 172(CGCAAGAAGCGG,+,0.00) 105(CGTCGCCA,+,0.00),169(CGTCGCAA,+,0.00) -20(GCCGCGCC,+,0.00),142(ACTGCGCA,+,0.00),229(GCCGCGCA,+,0.00) 95(GCGGCCCCAGCG,+,0.00),282(CTCCGGGCCCGC,-,0.00),295(GCGGCGCCCGCT,+,0.00) 91(CTTCGCGG,+,0.00) 561_WT_peak_1547 chr12 1799844 1800046 + 109 NA promoter-TSS (NM_024551) promoter-TSS (NM_024551) -302 NM_024551 79602 Hs.371642 NM_024551 HPRD:06403 ADIPOR2 ACDCR2|PAQR2 adiponectin receptor 2 protein-coding 0.064356 0.566502 -108(GCCCCCTCCTCC,+,0.00) -73(TCGGTGGG,-,0.00) -83(GCTTCCTTTTTC,-,0.00) 561_WT_peak_1540 chr12 498173 498550 + 109 NA promoter-TSS (NM_001130148) promoter-TSS (NM_001130148) -155 NM_001130147 84318 Hs.631656 NM_032358 HPRD:17485 CCDC77 - coiled-coil domain containing 77 protein-coding 0.076923 0.619048 -71(CCGGGGGGGGGG,-,0.00) 195(ACGACGCC,+,0.00) -101(CCCCCGGC,-,0.00),-72(GCCGGGGG,+,0.00) -124(TGGCACGA,-,0.00),191(CTGCACGA,-,0.00) -17(CCCACTAAGCCC,+,0.00) -100(CCCCGGCCCCAC,-,0.00) -155(AACTCGGCTC,-,0.00) -110(CCGCGTAG,-,0.00),27(CTTCGCGG,+,0.00) 561_WT_peak_6704 chr7 72395518 72395988 + 109 NA intron (NM_001257190, intron 4 of 15) CpG 29549 NR_033323 260294 Hs.510927 NM_148936 HPRD:15657 NSUN5P2 NOL1R2|NSUN5C|WBSCR20B|WBSCR20C NOP2/Sun domain family, member 5 pseudogene 2 pseudo 0.148936 0.721868 -131(TAGCGTCT,+,0.00) 241(TCGGCGCC,+,0.00) 49(GGGCCGGGGCTG,-,0.00) 222(TCGTTCGG,-,0.00),261(TCGTTCGG,-,0.00) -140(GCCGGGCG,+,0.00) 120(TCGTGCCG,+,0.00) -73(GGCGCGGT,-,0.00) 46(CCGGGGCCGGGG,+,0.00) -123(CCCGGAGTCGCG,+,0.00),-34(CGCGGAGCCGCG,+,0.00),-34(CGCGGAGCCGCG,-,0.00) 70(GGCCAGGGCGGT,-,0.00) 140(CTGGCCTGGCTG,+,0.00),167(GCGGCCTGGTGG,+,0.00) 561_WT_peak_3182 chr17 40540715 40541115 + 109 NA promoter-TSS (NM_003150) promoter-TSS (NM_003150) -402 NM_139276 6774 Hs.463059 NM_003150 HPRD:00026 STAT3 APRF|HIES signal transducer and activator of transcription 3 (acute-phase response factor) protein-coding 0.042500 0.583541 -133(CCTCCCTCCGCC,+,0.00) 20(CCTCCTGCCCGC,+,0.00) 41(TCCCGGCCCT,+,0.00) 38(TTTTCCCG,-,0.00) 561_WT_peak_7527 chrX 44732530 44733089 + 109 NA exon (NM_001291415, exon 1 of 30) exon (NM_001291415, exon 1 of 30) 388 NM_021140 7403 Hs.522616 NM_021140 HPRD:02131 KDM6A KABUK2|UTX|bA386N14.2 lysine (K)-specific demethylase 6A protein-coding 0.144902 0.723214 308(TAGCCGCT,+,0.00) -65(CCGCCTTCACCG,+,0.00),311(CCGCTCTCCCGG,+,0.00),319(CCGGGAGGACCG,-,0.00) -35(TCGTCGCC,+,0.00),-32(TCGCCGCC,+,0.00),-6(GGCGGCGA,-,0.00) 286(CCGGTCGG,-,0.00) -23(CCCGCGGC,-,0.00) 383(TCGCGCCG,+,0.00) 56(GTCCGAGG,-,0.00),250(CGGCGGAC,+,0.00) 369(CGGTTTGG,-,0.00) 183(CGGGAAAA,+,0.00) -82(CCCTGCCGCCGC,-,0.00),-76(CGCCGCCGCCGC,-,0.00),-73(CGCCGCCGCCGC,-,0.00),139(CGCTGCCGCCGC,-,0.00),354(GCGGGGCGGGCA,+,0.00) -92(GCTCCGCAGC,-,0.00),351(GCGGCGGGGC,+,0.00) 561_WT_peak_3826 chr19 48248762 48249019 + 109 NA promoter-TSS (NM_015710) promoter-TSS (NM_015710) 97 NM_015710 29997 Hs.421907 NM_015710 HPRD:16142 GLTSCR2 PICT-1|PICT1 glioma tumor suppressor candidate region gene 2 protein-coding 0.081712 0.643411 0(GGCGGCGA,-,0.00) 28(GGGCTGGCGGCG,-,0.00) -105(CGGCAGGA,-,0.00) 15(GAAATAAGAAGC,+,0.00) -5(GCGGCGGCGGCG,+,0.00),25(GCGGGGCTGGCG,+,0.00) 1(GCGGCGAGGC,+,0.00) 561_WT_peak_3786 chr19 44123139 44123836 + 109 NA intron (NM_182498, intron 1 of 2) CpG 527 NM_182498 126299 Hs.99093 NM_182498 HPRD:14671 ZNF428 C19orf37|Zfp428 zinc finger protein 428 protein-coding 0.086083 0.646132 308(CCGGCTCCCCGG,+,0.00),362(CCCGCTTCCCGG,+,0.00) 259(CGCGTAGG,+,0.00) 190(CGGACCGA,+,0.00) 250(CGGCACAA,-,0.00) 50(TAGCGACC,-,0.00),330(CGTCGCTC,+,0.00),469(CGTCGCAA,+,0.00) -30(CAAAACCT,+,0.00) 305(CCGCCGGCTCCC,-,0.00) 489(AGCGCGCA,+,0.00),522(TGCGCGGC,-,0.00) 406(CCGGCGCCGGCG,+,0.00) 242(CCCCAGGGCGGC,-,0.00) 345(GCAGCGGGGC,+,0.00),365(GCTTCCCGGC,-,0.00) 561_WT_peak_3086 chr17 26605326 26605612 + 109 NA intron (NR_028334, intron 2 of 2) L1M5|LINE|L1 28939 NR_028334 284085 Hs.371796 NM_173624 HPRD:08284 KRT18P55 - keratin 18 pseudogene 55 pseudo 0.006993 0.400697 -67(CAAAACCC,+,0.00),-41(CAAAACCC,+,0.00) 561_WT_peak_721 chr1 211555900 211556564 + 109 NA non-coding (NR_026761, exon 1 of 6) non-coding (NR_026761, exon 1 of 6) 135 NR_026761 84791 Hs.523932 NM_032705 HPRD:17500 LINC00467 C1orf97 long intergenic non-protein coding RNA 467 ncRNA 0.079819 0.601504 -119(AAACGCTT,-,0.00),7(AGTCGCTT,-,0.00),363(AGGCCGCT,+,0.00) 443(TCGACGGC,+,0.00) 67(CGCGTGCG,+,0.00),69(CGTGCGCG,-,0.00),90(CCTACGCG,-,0.00) 95(GCGGTCGG,-,0.00),147(TCGGTCCG,-,0.00) 336(CCCCCTCTGCCC,+,0.00) 168(AGTCGGAC,+,0.00) -87(AAAAACCG,+,0.00) -16(CCTAAGGCTCCC,-,0.00),11(GCTTCCGCTCCC,-,0.00) 260(GCCGCGCC,+,0.00) 18(CTCCCGCCCCGC,-,0.00) -159(AAATCGGCCC,-,0.00) 91(CTACGCGG,+,0.00) 561_WT_peak_2547 chr15 72978500 72978788 + 109 NA promoter-TSS (NR_002780) promoter-TSS (NR_002780) 124 NR_045566 585 Hs.208681 NM_033028 HPRD:08982 BBS4 - Bardet-Biedl syndrome 4 protein-coding 0.093750 0.647059 -79(TCGCGACG,-,0.00) -121(GCCGCGCA,+,0.00) -121(GCCGCGCAGC,-,0.00) 561_WT_peak_1891 chr12 121647809 121648154 + 109 NA exon (NM_001256796, exon 1 of 13) exon (NM_001256796, exon 1 of 13) 317 NM_002560 5025 Hs.321709 NM_002560 HPRD:09017 P2RX4 P2X4|P2X4R purinergic receptor P2X, ligand-gated ion channel, 4 protein-coding 0.142029 0.765896 -123(CCTTCCGGGCCC,-,0.00) -126(CCTCCTTCCGGG,+,0.00),146(CGGGGGGCGCGG,-,0.00) 33(CGAGTACG,+,0.00),171(CGCGTCCG,+,0.00),173(CGTCCGCG,-,0.00) -142(CCGACCGC,+,0.00),-42(CAGACCGA,+,0.00) -14(GGCGCGGC,-,0.00),45(GCCGCGCA,+,0.00),89(ACCGCGCC,+,0.00),151(GGCGCGGC,-,0.00) -157(CCCGGGCCCCGG,-,0.00),-57(GCGGGGACTGGG,+,0.00) -68(CGGGGCTCCGAG,-,0.00),134(CGTGGGGCCGCG,+,0.00) -71(GGGCGGGGCT,+,0.00) -38(CCGACTAG,-,0.00) -11(GCGGCCATGGCG,+,0.00),-9(GGCCATGGCGGG,-,0.00) 5(GCTGCGCCGC,+,0.00),5(GCTGCGCCGC,-,0.00) 19(GCGGCCTTCCTG,+,0.00) 561_WT_peak_462 chr1 147735813 147736115 + 109 NA intron (NR_102404, intron 17 of 18).2 intron (NR_102404, intron 17 of 18).2 -16622 NR_120331 101927468 Hs.515867 NR_120331 LOC101927468 - uncharacterized LOC101927468 ncRNA 0.052980 0.475248 40(GAAACAGAAAGT,+,0.00) -93(GGGCTGCGTT,+,0.00) 561_WT_peak_3444 chr18 13674868 13675024 + 109 NA intron (NM_001098801, intron 3 of 4) intron (NM_001098801, intron 3 of 4) 33189 NM_001276251 753 Hs.731853 NM_004338 HPRD:07358 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding 0.012821 0.388535 -43(ATTTCCTGTTTC,-,0.00) 561_WT_peak_838 chr1 249239893 249240090 + 109 NA Intergenic (TTAGGG)n|Simple_repeat|Simple_repeat 39549 NM_170725 267002 Hs.602037 NM_170725 PGBD2 - piggyBac transposable element derived 2 protein-coding 0.000000 0.535354 561_WT_peak_3327 chr17 66508596 66508906 + 109 NA intron (NM_212472, intron 1 of 10) CpG 231 NM_212472 5573 Hs.280342 NM_002734 HPRD:01786 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase, cAMP-dependent, regulatory, type I, alpha protein-coding 0.122581 0.749196 -20(AGCCGGTT,-,0.00),25(AGCGACCT,-,0.00) 56(GCCCCTCCCCGG,+,0.00),76(GCGCCTCCCCGC,+,0.00) -60(TCGGCCGG,-,0.00) -57(GCCGGGGG,+,0.00),98(CCCCCGGC,-,0.00) -31(CGTCGCTT,+,0.00) 62(CCCCGGCCCGGC,-,0.00) 100(CCCGGCTCCGAG,-,0.00) -115(CCGCCTCG,-,0.00) -113(GCCTCGCACC,-,0.00),-27(GCTTCGCAGC,-,0.00) 64(CCGGCCCGGCGG,+,0.00) 561_WT_peak_1925 chr12 132195422 132195803 + 109 NA promoter-TSS (NM_001261411) promoter-TSS (NM_001261411) -20 NM_004592 6433 Hs.308171 NM_004592 HPRD:09055 SFSWAP SFRS8|SWAP splicing factor, suppressor of white-apricot family protein-coding 0.091864 0.596859 -40(TAGCGGCT,+,0.00),-39(AGCGGCTA,-,0.00) 175(CCGGGGACGCTG,-,0.00) 169(TGGACGCC,+,0.00) 24(TCCTGCCG,+,0.00),194(CGGCGCGA,-,0.00) 71(CGGTGTTG,-,0.00) -37(CGGCTAAA,+,0.00) 208(GCCGCGCC,+,0.00) 202(GCGGGGGCCGCG,+,0.00) 206(GGGCCGCGCC,+,0.00) 58(CCCGCTATGGCG,+,0.00),60(CGCTATGGCGGC,-,0.00) 164(CAGCCTGGACGC,-,0.00) 561_WT_peak_5242 chr3 127770809 127771169 + 109 NA promoter-TSS (NM_013336) promoter-TSS (NM_013336) -223 NM_013336 29927 Hs.518236 NM_013336 HPRD:15316 SEC61A1 HSEC61|SEC61|SEC61A Sec61 alpha 1 subunit (S. cerevisiae) protein-coding 0.116667 0.698061 -20(TCGACGCT,+,0.00) 115(GCGCGCCAGGCC,+,0.00) 80(TGCGCAGC,-,0.00),186(GGCGCGGC,-,0.00) 105(GGCGGGCCCCGC,-,0.00),106(GCGGGCCCCGCG,+,0.00) 148(GCCCCGCTGC,-,0.00) 117(GCGCCAGGCCCC,-,0.00) 561_WT_peak_1743 chr12 58176389 58176672 + 109 NA promoter-TSS (NM_001172697) promoter-TSS (NM_001172697) 2 NM_001172697 10102 Hs.632704 NM_005726 HPRD:05285 TSFM EFTS|EFTSMT Ts translation elongation factor, mitochondrial protein-coding 0.095406 0.612676 71(CGGACCGGGAGC,+,0.00) 32(ATGTCGCT,+,0.00) -33(GCCGCGCC,+,0.00) 561_WT_peak_5304 chr3 160117317 160117709 + 108 NA promoter-TSS (NM_020800) promoter-TSS (NM_020800) -193 NM_001190241 57560 Hs.478095 NM_020800 HPRD:13853 IFT80 ATD2|SRTD2|WDR56 intraflagellar transport 80 protein-coding 0.076531 0.564885 -30(GGACCCGGAGCC,+,0.00) 207(CTCGGCCGCT,-,0.00) 129(AGAGGCCT,-,0.00) 15(CACAACCG,+,0.00) 54(CAGGTAAA,+,0.00) 561_WT_peak_2986 chr17 3749327 3749740 + 108 NA promoter-TSS (NM_001114118) promoter-TSS (NM_001114118) 12 NM_001114118 55421 Hs.120963 NM_018553 C17orf85 ELG|HSA277841 chromosome 17 open reading frame 85 protein-coding 0.121065 0.751208 -110(TCGCCCTCCTCC,+,0.00) -89(GGCTCCGGCTCG,-,0.00) 64(CACGGCCGCC,-,0.00) -13(CCGCCTTCACCG,+,0.00) 50(GAGAGCCCGCCC,+,0.00) 11(CCCGTACG,+,0.00) 54(GCCCGCCCCT,+,0.00) -126(AGGCACGA,-,0.00) 158(TAGCGCCG,-,0.00) 231(GGACTGAGCGGG,-,0.00) -70(CAACACCG,+,0.00),185(GAAAACCG,+,0.00) -44(GGGAGCCCCAGG,+,0.00),217(GGGAGGAGAAGG,+,0.00) 200(TGCGCGGG,-,0.00) -33(GGCCGGCCCCGC,-,0.00),4(CGCAGGCCCCGT,-,0.00),238(GCGGGGACGGGG,+,0.00) 19(GCCGCCATCGCT,+,0.00) 160(GCGCCGCCGC,-,0.00) 190(CCGGGCCGGCTG,+,0.00) 561_WT_peak_5152 chr3 71275946 71276235 + 108 NA intron (NM_001012505, intron 5 of 6) intron (NM_001012505, intron 5 of 6) 18226 NM_001244814 27086 Hs.59368 NM_032682 HPRD:18518 FOXP1 12CC4|QRF1|hFKH1B forkhead box P1 protein-coding 0.044983 0.586207 110(TAGCGATG,-,0.00) -39(GTCAGACG,-,0.00) 561_WT_peak_4125 chr2 70056732 70057293 + 108 NA 5' UTR (NM_178439, exon 1 of 14) 5' UTR (NM_178439, exon 1 of 14) 194 NM_178439 64395 Hs.293971 NM_178439 GMCL1 BTBD13|GCL|GCL1|SPATA29 germ cell-less, spermatogenesis associated 1 protein-coding 0.108734 0.704626 344(GGAGGAGGGGGA,-,0.00) 211(CGGCCCGGAGGC,+,0.00) 63(GGCGGCCGAG,+,0.00) 46(CGGGGAAGGCTG,-,0.00),214(CCCGGAGGCCGG,-,0.00) 153(CTGCGCCAGCCA,+,0.00) -129(CGTACGCA,-,0.00) 200(GGCGGGGG,+,0.00) -58(CGGCGCGA,-,0.00) -150(CCGCCCCTTCCG,-,0.00) 113(CGGGGAGCCGTG,+,0.00),286(AGCGGAGCAGCG,+,0.00) 207(GGCTCGGCCC,-,0.00) 69(CGAGCCATGGCG,+,0.00),71(AGCCATGGCGGG,-,0.00),194(TGCCAGGGCGGG,-,0.00) -75(GCTGCGGTGC,+,0.00) 561_WT_peak_3434 chr18 11850902 11851266 + 108 NA promoter-TSS (NM_020412) promoter-TSS (NM_020412) -305 NM_020412 57132 Hs.656244 NM_020412 HPRD:12106 CHMP1B C10orf2|C18-ORF2|C18orf2|CHMP1.5|Vps46-2|Vps46B|hVps46-2 charged multivesicular body protein 1B protein-coding 0.054945 0.460274 138(AAAAACCG,+,0.00) 33(TTTACACG,-,0.00),144(CGGGTAGA,+,0.00) 561_WT_peak_3665 chr19 15947524 15947796 + 108 NA TTS (NR_015379) TTS (NR_015379) 7903 NR_015379 652995 Hs.644234 NR_015379 ENSG00000214049 UCA1 CUDR|LINC00178|NCRNA00178|UCAT1 urothelial cancer associated 1 (non-protein coding) ncRNA 0.091912 0.725275 -123(GCTGCCGGCCCA,-,0.00) -102(TGCGGCCGAG,+,0.00) 59(CCGGCTTCCGGG,+,0.00) -159(ACTGCGCA,+,0.00) 34(GTCCGGCCCCGC,-,0.00) -84(GGGCCGAGCT,+,0.00) 561_WT_peak_16 chr1 1510293 1510598 + 108 NA promoter-TSS (NM_014188) promoter-TSS (NM_014188) -183 NM_014188 29101 Hs.30026 NM_014188 HPRD:13712 SSU72 HSPC182|PNAS-120 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) protein-coding 0.118033 0.656863 130(GCCTCCGGCCCC,-,0.00) -122(TCGCCGCC,+,0.00) 113(CCGTGCCG,+,0.00) -30(CGATTTTG,-,0.00) -57(CGCGGCCCGGCG,-,0.00) -34(GGGACGATTT,+,0.00) -56(GCGGCCCGGCGT,+,0.00) 561_WT_peak_7551 chrX 52987641 52988001 + 108 NA promoter-TSS (NM_001242491).2 promoter-TSS (NM_001242491).2 -106 NM_001242491 29057 Hs.6451 NM_014138 HPRD:06683 FAM156A PRO0659|TMEM29 family with sequence similarity 156, member A protein-coding 0.130556 0.684211 157(AGCGGCTT,-,0.00) -81(CCGCCCTCCGGC,+,0.00),145(CGGCGTTCCCGG,+,0.00) -7(GCGACGCC,+,0.00),112(GGCGTGGA,-,0.00) 95(GGACTGCGAGGG,-,0.00) -43(GGGGCGCCGGCG,+,0.00) -159(CGCGGCGCCTCG,+,0.00),-159(CGCGGCGCCTCG,-,0.00) -161(AACGCGGCGC,-,0.00),-126(AGCGCCGCCC,-,0.00) -60(GCGCCGCAGC,-,0.00) 561_WT_peak_7583 chrX 77041429 77041671 + 108 NA 5' UTR (NM_000489, exon 1 of 35) 5' UTR (NM_000489, exon 1 of 35) 205 NM_138270 546 Hs.533526 NM_000489 HPRD:02069 ATRX ATR2|JMS|MRXHF1|RAD54|RAD54L|SFM1|SHS|XH2|XNP|ZNF-HX alpha thalassemia/mental retardation syndrome X-linked protein-coding 0.086777 0.613169 31(AGGCCGCT,+,0.00) -66(GGCGCCGA,-,0.00) -89(CTTGTCGG,+,0.00) -53(GCTCCCCCGC,-,0.00) 561_WT_peak_1289 chr11 57092455 57092883 + 108 NA promoter-TSS (NM_033396) promoter-TSS (NM_033396) -256 NM_033396 85456 Hs.530730 NM_033396 HPRD:06164 TNKS1BP1 TAB182 tankyrase 1 binding protein 1, 182kDa protein-coding 0.081776 0.620047 97(CTCCGCCGCC,-,0.00) -122(AGCCGGTT,-,0.00),165(AAGCGGCT,+,0.00),166(AGCGGCTT,-,0.00) -156(TCCACGCC,+,0.00) 137(CGGCAAGA,-,0.00) 37(CGGGTAAA,+,0.00) 170(GCTTCCTGATAC,-,0.00) -62(GGCGCGGC,-,0.00) 91(CCCGGGCTCCGC,-,0.00) -62(GGCGCGGCCC,-,0.00) 52(CCGAGACG,-,0.00),78(CTTGGCGG,+,0.00) 75(TGCCTTGGCGGC,-,0.00) 96(GCTCCGCCGC,-,0.00) 561_WT_peak_7455 chr9 132565126 132565353 + 108 NA promoter-TSS (NM_014506) promoter-TSS (NM_014506) -193 NM_014506 27348 Hs.252682 NM_014506 HPRD:16270 TOR1B DQ1 torsin family 1, member B (torsin B) protein-coding 0.052863 0.473684 52(CCGCCCTCCTCT,+,0.00) -75(CTCGGCCTCC,-,0.00) -32(GCCCGGCCCG,+,0.00) -33(CGCCCGGC,-,0.00) -29(CGGCCCGA,-,0.00) 24(CTTCGGAC,+,0.00) 6(CAAAACAG,+,0.00) -37(ACCGCGCC,+,0.00) 561_WT_peak_2504 chr15 60770789 60771656 + 108 NA promoter-TSS (NR_120339) promoter-TSS (NR_120339) 137 NM_001276385 79664 Hs.200943 NM_024611 HPRD:17628 ICE2 BRCC1|NARG2 interactor of little elongator complex ELL subunit 2 protein-coding 0.066897 0.588710 192(TGGCCCGGCAGC,+,0.00) 145(CCCGGCCGCC,-,0.00) 28(AAACGGCT,+,0.00),394(AGCGACAT,-,0.00),508(AAGTGGTT,+,0.00) -68(TCGACACC,+,0.00) 211(CGTCCGCG,-,0.00) -52(CCGACCGG,+,0.00) 166(TCCCGCCCCT,+,0.00) 82(CAGGTAAA,+,0.00) 114(GCCGCGCA,+,0.00),360(GCCGCGCC,+,0.00) 189(CGCTGGCCCGGC,-,0.00) 368(GACTCGGCCC,-,0.00) 366(CCGACTCG,-,0.00),367(CGACTCGG,+,0.00) 149(GCCGCCATGTTC,+,0.00) 561_WT_peak_5624 chr4 154036967 154037351 + 108 NA Intergenic Intergenic -37111 NM_001130067 23321 Hs.435711 NM_015271 HPRD:10279 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding 0.013021 0.462338 131(GCCTCCTTTTTC,-,0.00) 124(AAGCCAGGCCTC,-,0.00) 561_WT_peak_3405 chr18 10028 10283 + 108 NA Intergenic (CCCTAA)n|Simple_repeat|Simple_repeat -1920 NR_110795 102723376 Hs.606852 NR_110795 LOC102723376 - uncharacterized LOC102723376 ncRNA 0.000000 0.515625 561_WT_peak_1204 chr11 9481735 9482321 + 108 NA promoter-TSS (NM_003442) promoter-TSS (NM_003442) 217 NR_036539 644656 Hs.597846 NR_036539 LOC644656 - uncharacterized LOC644656 ncRNA 0.056314 0.601363 76(CTCGGCCGAC,-,0.00) 242(AGCCGCCT,-,0.00),406(AAGCGGTT,+,0.00) 287(GCTCCCTCCCGG,+,0.00) -91(CCCCCGGC,-,0.00) 324(CCTCGCTA,+,0.00) 239(CAAAGCCG,+,0.00),409(CGGTTATG,-,0.00) 296(CGGGTAAT,+,0.00) 136(CCTTCGACTTCC,-,0.00) 561_WT_peak_1340 chr11 64863483 64864133 + 108 NA exon (NM_013265, exon 1 of 10) exon (NM_013265, exon 1 of 10) 221 NM_013265 738 Hs.277517 NM_013265 HPRD:12605 VPS51 ANG2|ANG3|C11orf2|C11orf3|FFR vacuolar protein sorting 51 homolog (S. cerevisiae) protein-coding 0.067692 0.643625 91(GCCGCCGGGCCT,-,0.00),279(CGACCCGGAAGT,+,0.00) 462(AGGCGTCT,+,0.00) 331(GCGGGGAGGGGG,-,0.00),332(CGGGGAGGGGGG,-,0.00) 253(CCGACTGA,+,0.00) 232(GCGGGGCCCGAC,+,0.00) 151(GCTCCGGAGC,+,0.00),151(GCTCCGGAGC,-,0.00) 561_WT_peak_3164 chr17 38136980 38137337 + 108 NA 5' UTR (NM_002809, exon 1 of 12) 5' UTR (NM_002809, exon 1 of 12) 137 NM_002809 5709 Hs.12970 NM_002809 HPRD:10170 PSMD3 P58|RPN3|S3|TSTA2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 protein-coding 0.117647 0.698324 132(CGCCCGGC,-,0.00) -42(TCGTGCGG,+,0.00),-37(CGGCCCGA,-,0.00) -32(CGACGCTA,+,0.00) -35(GCCCGACG,-,0.00) 123(CGAAACCG,+,0.00) 97(GGCGCGGC,-,0.00) 165(CGCCGGCCCCCC,-,0.00) 99(CGCGGCGCCGCG,+,0.00),99(CGCGGCGCCGCG,-,0.00) 561_WT_peak_2158 chr14 31091265 31091665 + 108 NA promoter-TSS (NM_016106) promoter-TSS (NM_016106) 5 NM_001283032 23256 Hs.369168 NM_016106 HPRD:10210 SCFD1 C14orf163|RA410|SLY1|SLY1P|STXBP1L2 sec1 family domain containing 1 protein-coding 0.060000 0.581047 -18(GGAGGAGGTGGG,-,0.00) -83(CATTACGGGCCA,-,0.00),39(GCTTCCGGGGCG,-,0.00) -116(TCGGTAGG,-,0.00) 19(GCCCCGCCCT,+,0.00) 14(CTTTGGCCCCGC,-,0.00),119(GCGGCGGCGGCG,+,0.00),125(GCGGCGGCAGCG,+,0.00) 81(GCTCCCCAGC,-,0.00) 561_WT_peak_4678 chr20 49002652 49002976 + 108 NA Intergenic Intergenic -64935 NR_109950 101927586 Hs.637665 NR_109950 ENSG00000233077 LINC01271 - long intergenic non-protein coding RNA 1271 ncRNA 0.021605 0.569231 -129(AGGTTTTG,-,0.00) -35(CGGGTTAA,+,0.00) 561_WT_peak_239 chr1 53067930 53068209 + 108 NA promoter-TSS (NM_015696) promoter-TSS (NM_015696) 26 NM_015696 2882 Hs.43728 NM_015696 HPRD:13606 GPX7 CL683|GPX6|GPx-7|GSHPx-7|NPGPx glutathione peroxidase 7 protein-coding 0.125448 0.710714 -92(AGCCGCCT,-,0.00) -39(GCGACGCC,+,0.00),-7(GGCGGCGA,-,0.00) -61(CCCCCGCC,-,0.00) -41(TCGCGACG,-,0.00) -111(GCGGGCCGAGCG,+,0.00),-102(GCGGCGCCAGAG,+,0.00) -131(AACGCGGCGC,-,0.00) -16(AGCCATGGTGGC,-,0.00) 9(GCGGCGTGGCTG,+,0.00),33(GCGGCCTGCGCG,+,0.00) 561_WT_peak_2836 chr16 48278049 48278683 + 108 NA exon (NM_031490, exon 1 of 15) exon (NM_031490, exon 1 of 15) 288 NM_001300948 83752 Hs.295923 NM_031490 LONP2 LONP|LONPL lon peptidase 2, peroxisomal protein-coding 0.094637 0.683465 356(GCGGCCTCCTCC,+,0.00) -151(AGGTCGCT,+,0.00),216(AGCCGCCT,-,0.00) 152(CCTGCTGCCCGG,+,0.00),421(CGGCCTTCGCGG,+,0.00) -13(GGCGTGGA,-,0.00) 27(GCCGGGGG,+,0.00),335(CCCGCGGC,-,0.00) 235(CGTCGCTG,+,0.00),287(CAGCGACG,-,0.00) -160(GTGAGGCGAAGG,+,0.00) 353(GGCGCGGC,-,0.00) 275(GCCTGACCCCGC,-,0.00),328(GGCTGCCCCCGC,-,0.00),338(GCGGCGGCGGCG,+,0.00) 211(TGCGGAGCCGCC,+,0.00) 186(GACTCGGCCC,-,0.00) 425(CTTCGCGG,+,0.00) 209(GGTGCGGAGC,+,0.00),239(GCTGCAAAGC,+,0.00) 321(TAGGCCTGGCTG,+,0.00) 561_WT_peak_167 chr1 33815724 33816202 + 108 NA promoter-TSS (NM_004427) promoter-TSS (NM_004427) -464 NM_004427 1912 Hs.524271 NM_004427 HPRD:10340 PHC2 EDR2|HPH2|PH2 polyhomeotic homolog 2 (Drosophila) protein-coding 0.085774 0.638831 79(AGCGGCCT,-,0.00) -51(TCGTGCCA,+,0.00),208(TCGTGGCG,+,0.00) 244(GGGCTGCGGGGG,-,0.00) 191(CGGGTGAA,+,0.00) -32(CGCTGTCCCCGA,-,0.00) -153(CTTGGCGG,+,0.00) -131(CCCGCCTTGGAC,+,0.00) 246(GCTGCGGGGG,+,0.00) -105(GGGGCCTGGGGG,+,0.00),123(CAGGCGGCCCGC,-,0.00) 561_WT_peak_1811 chr12 95611984 95612299 + 108 NA promoter-TSS (NM_018351) promoter-TSS (NM_018351) 619 NM_017599 55591 Hs.24135 NM_017599 HPRD:11671 VEZT VEZATIN vezatin, adherens junctions transmembrane protein protein-coding 0.041270 0.500000 -153(TCGTGCCT,+,0.00) 561_WT_peak_4721 chr20 62152139 62152444 + 108 NA intron (NM_024299, intron 1 of 3) CpG-17002 158 NM_024299 79144 Hs.79625 NM_024299 HPRD:12750 PPDPF C20orf149|dJ697K14.9|exdpf pancreatic progenitor cell differentiation and proliferation factor protein-coding 0.144262 0.794118 -14(GGCGGGGGGCGA,-,0.00) -66(TCGCCGCC,+,0.00) 120(GGGCCGGGGCCC,-,0.00) 79(TCGGGCGG,-,0.00) -14(GGCGGGGG,+,0.00),11(GCCGGGGG,+,0.00) -161(GGCGCGGC,-,0.00),-64(GCCGCCCA,+,0.00),130(CCCGCGCA,+,0.00) -111(CCCCGTCCCCGC,-,0.00),6(GCTGGGCCGGGG,+,0.00) -159(CGCGGCTTCCCG,-,0.00),124(CGGGGCCCCGCG,-,0.00) -1(GGGCGGGGCT,+,0.00) 561_WT_peak_4801 chr21 40685358 40685395 + 108 NA promoter-TSS (NR_111942) promoter-TSS (NR_111942) 336 NM_001007246 54014 Hs.627139 NM_018963 HPRD:11683 BRWD1 C21orf107|N143|WDR9 bromodomain and WD repeat domain containing 1 protein-coding 0.162162 0.657895 -158(CTTACCCG,-,0.00) -153(CCGACTCG,-,0.00) 561_WT_peak_3939 chr19 59070573 59070786 + 108 NA promoter-TSS (NM_003969) promoter-TSS (NM_003969) 126 NR_027334 100131691 Hs.743767 NR_027334 ENSG00000267858 LOC100131691 - uncharacterized LOC100131691 ncRNA 0.070423 0.612150 -121(CGCCCGGC,-,0.00) -71(CGGCAAGA,-,0.00) -138(CCGCTGCTGCCG,-,0.00) -118(CCGGCCTGCCTT,+,0.00) 561_WT_peak_7427 chr9 129233341 129233681 + 108 NA intron (NM_033446, intron 7 of 9) MIRb|SINE|MIR -60728 NR_045006 641373 Hs.742606 NR_045006 NRON NCRNA00194 non-protein coding RNA, repressor of NFAT ncRNA 0.035294 0.524927 137(GACTCCGGCGCC,-,0.00) -68(TAAAACCG,+,0.00) 561_WT_peak_2896 chr16 70834800 70835072 + 108 NA 5' UTR (NM_018052, exon 1 of 19) 5' UTR (NM_018052, exon 1 of 19) 125 NM_018052 55697 Hs.445061 NM_018052 HPRD:07660 VAC14 ArPIKfyve|TAX1BP2|TRX Vac14 homolog (S. cerevisiae) protein-coding 0.110294 0.717949 -7(GAACCCGGGCCC,-,0.00) -25(CTCCGCCGCC,-,0.00) -127(CCCGCGGC,-,0.00),-74(CCCCCGGC,-,0.00),49(CGCCCGGC,-,0.00) 53(CGGCACTA,-,0.00) -112(GCCGCGCC,+,0.00) -106(CCGGGGCCAGGG,+,0.00),-71(CCGGCGCCGGCG,+,0.00),2(CCCGGACCCCGC,-,0.00) -89(TGCGGCTCCGCT,-,0.00) -114(GGGCCGCGCC,+,0.00) -20(CCGCCTCG,-,0.00) -26(GCTCCGCCGC,-,0.00) 561_WT_peak_1318 chr11 62379796 62380232 + 108 NA promoter-TSS (NM_000327) promoter-TSS (NM_000327) -199 NM_000327 6094 Hs.281564 NM_000327 HPRD:01616 ROM1 ROM|ROSP1|RP7|TSPAN23 retinal outer segment membrane protein 1 protein-coding 0.137615 0.796339 -4(GGCGGCGGAG,+,0.00) 7(AGGCGTCT,+,0.00) -91(CCGGGAAGGGGC,-,0.00),-76(CCGCCCGCCCCG,+,0.00),33(CCGGGGAGAGGG,-,0.00) 8(GGCGTCTA,-,0.00) 265(CGGACGCG,-,0.00) -101(GCCGGGCG,+,0.00),-47(CCCGCGGC,-,0.00),17(GCCGCGGG,+,0.00) 177(CCTCGGAC,+,0.00),262(CGCCGGAC,+,0.00) 198(CTCTCGGCTCCC,-,0.00) -75(CGCCCGCCCCGC,-,0.00),-54(ACCGGGCCCCGC,-,0.00),-53(CCGGGCCCCGCG,+,0.00),-9(GCGGCGGCGGCG,+,0.00),59(CCGGGGCGCGCG,+,0.00) 192(GGGCCGCTCT,+,0.00) 25(GGCCACGGCCGG,-,0.00) -49(GCCCCGCGGC,-,0.00),243(GCGCCGCAGC,-,0.00) 561_WT_peak_1815 chr12 96793958 96794235 + 108 NA 5' UTR (NM_001170464, exon 1 of 16) 5' UTR (NM_001170464, exon 1 of 16) 270 NM_002595 5128 Hs.506415 NM_002595 HPRD:09141 CDK17 PCTAIRE2|PCTK2 cyclin-dependent kinase 17 protein-coding 0.162455 0.744604 39(GGCGGCCGCG,+,0.00) -51(GGCGCCGA,-,0.00),94(TTGACGCC,+,0.00) -100(CGCGGACG,+,0.00),45(CGCGTTCG,+,0.00) -163(GCCGCGGG,+,0.00),-70(GCCGGGCG,+,0.00),-23(GCCGGGCG,+,0.00) 66(CGTCGCTT,+,0.00) -39(GGGCTGAGACTG,-,0.00) -52(GGGCGCCGACGG,+,0.00) -59(GCGCGGCGGGCG,+,0.00) -110(CGACGAGCCGCG,+,0.00),-2(CGCGGCTCTGCG,-,0.00) 41(CGGCCGCGTT,+,0.00) 561_WT_peak_5429 chr4 25235286 25235519 + 108 NA promoter-TSS (NM_018323) promoter-TSS (NM_018323) -251 NM_018323 55300 Hs.191701 NM_018323 HPRD:15132 PI4K2B PI4KIIB|PIK42B phosphatidylinositol 4-kinase type 2 beta protein-coding 0.034335 0.538462 -85(AAGCCGCT,+,0.00),-84(AGCCGCTT,-,0.00) 8(CCGCGCTCACGG,+,0.00) -2(CAGCTTCTCCCC,-,0.00) -81(CGCTTTTG,-,0.00) 57(AGCCCCGCCC,-,0.00) 561_WT_peak_7568 chrX 69353369 69353555 + 108 NA intron (NM_001551, intron 1 of 6) CpG 144 NM_001551 3476 Hs.496267 NM_001551 HPRD:02140 IGBP1 ALPHA-4|IBP1 immunoglobulin (CD79A) binding protein 1 protein-coding 0.096774 0.614973 -23(GGCGACGA,-,0.00) -41(ACTTCTCAGCCC,+,0.00) 10(GGGTTTTG,-,0.00) -29(CGTGTCGG,+,0.00) 561_WT_peak_4490 chr2 232347635 232348002 + 108 NA Intergenic MER45A|DNA|hAT-Tip100 -18613 NM_005381 4691 Hs.79110 NM_005381 NCL C23 nucleolin protein-coding 0.062670 0.665761 -136(AGCGGCCT,-,0.00),-110(AGGCCTCT,+,0.00),78(AGGCCTCT,+,0.00) 184(CAGCCTTCCCGG,+,0.00) 171(TCCTGCCG,+,0.00) -156(CGGGTTTG,-,0.00) -84(CCCTCGCCTCCC,-,0.00) -13(CGGGGCTCCGGG,-,0.00) -46(GGGCGGGTTC,+,0.00) -101(CAGGCAGCCCCC,-,0.00) 561_WT_peak_4269 chr2 114360727 114360918 + 108 NA intron (NR_024004, intron 1 of 2) (CCCTAA)n|Simple_repeat|Simple_repeat 472 NR_024004 84771 Hs.712940 NR_024004 ENSG00000236397 DDX11L2 - DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 like 2 pseudo 0.000000 0.531250 561_WT_peak_2659 chr16 2524158 2524356 + 108 NA promoter-TSS (NM_001199107) promoter-TSS (NM_001199107) -890 NM_001199107 57465 Hs.353087 NM_020705 ENSG00000162065 TBC1D24 DFNA65|DFNB86|DOORS|EIEE16|FIME|TLDC6 TBC1 domain family, member 24 protein-coding 0.106061 0.728643 -110(CTGGGCCGCC,-,0.00) -36(CAGCGACAGCCC,+,0.00) -156(CCTTCGCCTGCC,-,0.00) -99(CCCCGTCCCCGC,-,0.00),-29(AGCCCGCCCCGC,-,0.00) 561_WT_peak_1926 chr12 132413754 132413934 + 108 NA promoter-TSS (NM_025215) promoter-TSS (NM_025215) 31 NM_025215 80324 Hs.592004 NM_025215 HPRD:10481 PUS1 MLASA1 pseudouridylate synthase 1 protein-coding 0.138889 0.729282 -160(CTCGGCCGCC,-,0.00) -29(TCGACTCC,+,0.00) -144(TCGGTCGT,-,0.00) -88(CGTCGCGA,+,0.00) -4(GCGGGGCGGGAG,+,0.00) -91(CCGCGTCG,-,0.00),-52(CGACGCGG,+,0.00) 561_WT_peak_4148 chr2 74425613 74426334 + 108 NA intron (NM_006636, intron 1 of 7) CpG 283 NM_006636 10797 Hs.469030 NM_006636 MTHFD2 NMDMC methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase protein-coding 0.117892 0.711911 -100(GGCGGAGGGAGG,-,0.00),542(GGCGGAGGGCGC,-,0.00) -40(CTTCCCTCCCGG,+,0.00) 348(GGCGTCGC,-,0.00) 436(CAGCGCCGGCCG,+,0.00) 111(TCGGTCAG,-,0.00) 538(TAGCGGCG,-,0.00) 417(TTTACGCG,-,0.00) -158(CCTTCGGCTCCA,-,0.00) -18(GGCGCGGT,-,0.00),40(CCCGCGCA,+,0.00) -89(GCGGGGCCTGCC,+,0.00),-58(GCGTGGCCCGCG,+,0.00) 340(CGACTCGG,+,0.00) 253(GCGCCGCCGC,-,0.00) 22(GCTGCCCGGCTG,+,0.00) 561_WT_peak_3829 chr19 48833327 48833551 + 108 NA intron (NM_001425, intron 4 of 4) CpG 4810 NM_001425 2014 Hs.9999 NM_001425 HPRD:18514 EMP3 YMP epithelial membrane protein 3 protein-coding 0.049107 0.537778 -73(GGCGGGGG,+,0.00) 561_WT_peak_5649 chr4 185683345 185683590 + 108 NA intron (NM_001286711, intron 16 of 19) intron (NM_001286711, intron 16 of 19) -28181 NM_024629 79682 Hs.575032 NM_024629 HPRD:14722 CENPU CENP50|CENPU50|KLIP1|MLF1IP|PBIP1 centromere protein U protein-coding 0.008163 0.479675 561_WT_peak_5610 chr4 146101335 146101722 + 108 NA promoter-TSS (NM_001102653) promoter-TSS (NM_001102653) -696 NM_001102653 54726 Hs.270851 NM_017493 HPRD:11033 OTUD4 DUBA6|HIN1|HSHIN1 OTU deubiquitinase 4 protein-coding 0.111111 0.688144 -161(CCGCCTCCTCGG,+,0.00) -39(TCGCCGCC,+,0.00) 23(CGCGCACG,+,0.00) -47(GCCGGGGG,+,0.00),10(CCCCCGCC,-,0.00) -126(CGGGGGGAGCGG,+,0.00) 189(ACCTCGCAGCCC,+,0.00) 83(GGGAGCCGAGGA,+,0.00),140(GGGCGCCGGAGG,+,0.00) 64(CCCGCGCA,+,0.00) 29(CGCTGGGCCGGC,-,0.00),50(GCGGGGCCTGCG,+,0.00) -73(GCCTCGCTGC,-,0.00) -76(ACGGCCTCGCTG,+,0.00) 561_WT_peak_237 chr1 52831539 52831924 + 108 NA intron (NM_032449, intron 1 of 23) CpG 146 NM_032449 200014 Hs.591451 NM_032449 HPRD:12393 CC2D1B - coiled-coil and C2 domain containing 1B protein-coding 0.127273 0.753886 46(GAATCCGAGCCA,-,0.00) 144(AGGTGGCT,+,0.00) 21(GCGGGGACGCGG,-,0.00) 213(GGCGGGGG,+,0.00) 119(TAGCGACA,-,0.00) 86(CCCTGGGCTCCC,-,0.00) 121(GCGACAGGAAGC,+,0.00) -34(CGCCCGCGCCGC,-,0.00),98(GCGGGCCCTGGG,+,0.00) 201(CACGGCTACGCG,-,0.00) 206(CTACGCGG,+,0.00) -46(GCCGCCCTGCCC,+,0.00) -127(CAGCCAGGCCTC,-,0.00) 561_WT_peak_554 chr1 155904415 155904622 + 108 NA promoter-TSS (NM_014949) promoter-TSS (NM_014949) -330 NM_014949 22889 Hs.24656 NM_014949 HPRD:17198 KIAA0907 BLOM7 KIAA0907 protein-coding 0.038647 0.451923 -29(CAGCCTTCCCGC,+,0.00) -22(CCCGCGGC,-,0.00) -13(TTTGCCCG,-,0.00) 561_WT_peak_2563 chr15 77197805 77198125 + 108 NA Intergenic Intergenic -21748 NM_020843 49855 Hs.458986 NM_020843 HPRD:11704 SCAPER ZNF291|Zfp291 S-phase cyclin A-associated protein in the ER protein-coding 0.078125 0.576324 -148(CGTTCGCG,-,0.00) -145(TCGCGCCG,+,0.00) 48(TAGAGACG,-,0.00) -38(CGCTTTTG,-,0.00) -88(GGCGCGGC,-,0.00) 130(CCGAGAAG,-,0.00) 561_WT_peak_4340 chr2 158269785 158270138 + 108 NA Intergenic Intergenic 30643 NM_004288 9595 Hs.270 NM_004288 HPRD:09192 CYTIP B3-1|CASP|CYBR|CYTHIP|HE|PSCDBP cytohesin 1 interacting protein protein-coding 0.008499 0.353107 -44(TTTACCCA,-,0.00) 561_WT_peak_7594 chrX 101186641 101186926 + 108 NA 5' UTR (NM_001282401, exon 1 of 9) 5' UTR (NM_001282401, exon 1 of 9) 256 NM_001011657 84460 Hs.496512 NM_001011657 HPRD:10029 ZMAT1 - zinc finger, matrin-type 1 protein-coding 0.115789 0.727273 24(GGAGGAGGCAGG,-,0.00),90(GGAGGAGGAGGA,-,0.00) 102(GGCGGCAGAG,+,0.00) -46(AGCCGCCA,-,0.00) -73(CCCCCCTCCCCG,+,0.00),-72(CCCCCTCCCCGC,+,0.00),74(CCGCGCAGGCGG,-,0.00) -22(CGTCGCCA,+,0.00) -40(CAAAGCCG,+,0.00) 73(GCCGCGCA,+,0.00) -147(GGCCGCCCCCGC,-,0.00),-34(CGCCGCCGCCGC,-,0.00),48(CGCCGCCGCCGC,-,0.00),51(CGCCGCCGCCGC,-,0.00),54(CGCCGCCGCCGC,-,0.00),57(CGCCGCCGCCGC,-,0.00),60(CGCCGCCGCCGC,-,0.00) -27(GCCGCCGTCGCC,+,0.00) 561_WT_peak_6165 chr6 26285034 26285315 + 108 NA TTS (NM_003543) TTS (NM_003543) 553 NM_003543 8365 Hs.591790 NM_003543 HPRD:11919 HIST1H4H H4/h|H4FH histone cluster 1, H4h protein-coding 0.021352 0.390071 561_WT_peak_4147 chr2 74405499 74405960 + 108 NA intron (NM_018221, intron 1 of 5) CpG 266 NM_018221 55233 Hs.602092 NM_018221 MOB1A C2orf6|MATS1|MOB1|MOBK1B|MOBKL1B|Mob4B MOB kinase activator 1A protein-coding 0.104121 0.705628 -30(TCGGCCTCCCCC,+,0.00) 240(GAAGCCGGGCCG,-,0.00) -31(CTCGGCCTCC,-,0.00),29(CTCGGCCCCC,-,0.00) -29(CGGCCTCCCCCG,+,0.00) -141(TCGGGCGG,-,0.00),-52(TCTGTCGG,-,0.00) -160(TCCCCGCCCT,+,0.00) 22(CCCCCGCC,-,0.00),103(CCCGCGGC,-,0.00),174(CCCCCGCC,-,0.00) 107(CGGCCCGA,-,0.00) 154(GGGAGGCGAGGG,+,0.00) 17(CCCCGCCCCCGC,-,0.00),90(CGCAGGCCCGGC,-,0.00),97(CCGGCGCCCGCG,+,0.00) 258(CTCGGAGCCGGG,+,0.00) 81(ACCTCGGCCC,-,0.00) 25(CCGCCTCG,-,0.00) 279(GCTGCGAGCC,+,0.00) 241(AAGCCGGGCCGC,-,0.00) 561_WT_peak_720 chr1 211432197 211432622 + 108 NA promoter-TSS (NM_001136223) promoter-TSS (NM_001136223) -299 NM_001136224 55758 Hs.356399 NM_018254 HPRD:08338 RCOR3 - REST corepressor 3 protein-coding 0.115294 0.730047 156(TGGCCCGGCTGC,+,0.00) -114(AGCGGCCT,-,0.00) -10(TCGCGCCG,+,0.00) -36(CCGCTCCCCCCG,-,0.00) 180(TTTCCCCG,-,0.00) 197(CCTTCCCCTCCC,-,0.00) -39(GGGCCGCTCC,+,0.00) 78(GCTCCGGAGC,+,0.00),78(GCTCCGGAGC,-,0.00),228(CCTGCGGAGC,+,0.00) -113(GCGGCCTGCGGG,+,0.00),155(GTGGCCCGGCTG,+,0.00) 561_WT_peak_1430 chr11 82671140 82671384 + 108 NA Intergenic L1ME3B|LINE|L1 58525 NM_145018 220042 Hs.165607 NM_145018 HPRD:08062 DDIAS C11orf82|noxin DNA damage-induced apoptosis suppressor protein-coding 0.012295 0.342857 561_WT_peak_7156 chr8 131257254 131257537 + 108 NA intron (NM_018482, intron 3 of 29) L3|LINE|CR1 51384 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 (non-protein coding) ncRNA 0.003534 0.390845 -141(CAACCAGGAAGC,+,0.00) 561_WT_peak_6068 chr6 148450 148852 + 108 NA promoter-TSS (NR_109817).2 promoter-TSS (NR_109817).2 -492 NR_109817 441123 NR_109817 ENSG00000170590 LINC00266-3 C6orf88|NCRNA00266-3|NCRNA00266C|dJ24O22.2 long intergenic non-protein coding RNA 266-3 ncRNA 0.037313 0.650124 -93(TAGCGGCT,+,0.00) 219(CGTACGCC,-,0.00) 216(CGTCGTAC,+,0.00) 561_WT_peak_7639 chrY 2342597 2342862 + 108 NA intron (NM_145177, intron 1 of 6).2 intron (NM_145177, intron 1 of 6).2 25851 NM_001171135 9189 Hs.131452 NM_004729 HPRD:02170 ZBED1 ALTE|DREF|TRAMP|hDREF zinc finger, BED-type containing 1 protein-coding 0.026415 0.518797 561_WT_peak_1799 chr12 93323252 93323495 + 108 NA promoter-TSS (NM_003566) promoter-TSS (NM_003566) -266 NM_003566 8411 Hs.567367 NM_003566 HPRD:05460 EEA1 MST105|MSTP105|ZFYVE2 early endosome antigen 1 protein-coding 0.111111 0.704918 -38(GGAGGCGGGCGA,-,0.00) -35(GGCGGGCGAG,+,0.00) -55(CCGCGTGCCCGC,+,0.00) -157(CGGCAGGA,-,0.00) -138(CAGCTTCTTCCG,-,0.00),6(CGGGAGGAGGGG,+,0.00) 28(CTGTTTTG,-,0.00) -73(GCCGCGCC,+,0.00) -149(CGCTGTCGCCGC,-,0.00) -75(GGGCCGCGCC,+,0.00) 561_WT_peak_4801-2 chr21 40685449 40686168 + 108 NA promoter-TSS (NM_018963) promoter-TSS (NM_018963) -25 NR_111942 103091865 Hs.190548 NR_111942 BRWD1-IT2 - BRWD1 intronic transcript 2 (non-protein coding) ncRNA 0.137691 0.731944 194(AGGCGGCT,+,0.00) 57(CCGGGGAGGCGA,-,0.00) -51(CCGACGCC,+,0.00),226(GCGACGCC,+,0.00) -125(GGGCTGGCGTCC,-,0.00) -68(CGTGCGCG,-,0.00) 381(TCGCTCGG,-,0.00) 14(GGCGGGGG,+,0.00),257(GCCGGGGG,+,0.00),540(GGCGGGGG,+,0.00) 494(CCGCGCCTCCCG,-,0.00) -53(GACCGACG,-,0.00),307(CGTGGGAC,+,0.00) -144(GCCGCGCC,+,0.00),493(GCCGCGCC,+,0.00) -97(CGCCGCCGCCGC,-,0.00),-94(CGCCGCCGCCGC,-,0.00),-91(CGCCGCCGCCGC,-,0.00),-88(CGCCGCCGCCGC,-,0.00),-85(CGCCGCCGCCGC,-,0.00) 521(CCCGGACCCGCG,+,0.00) 514(AACGCCGCCC,-,0.00) 324(CTACGCGG,+,0.00),345(CCGAGTCG,-,0.00) -98(GCGCCGCCGC,-,0.00),135(GCGCCGCAGC,-,0.00) 561_WT_peak_5940 chr5 137800067 137800609 + 107 NA promoter-TSS (NM_001964) promoter-TSS (NM_001964) -843 NM_001964 1958 Hs.326035 NM_001964 HPRD:00549 EGR1 AT225|G0S30|KROX-24|NGFI-A|TIS8|ZIF-268|ZNF225 early growth response 1 protein-coding 0.057196 0.657459 171(AGGCCCGGGGTC,+,0.00) -81(AGGCCTCT,+,0.00),371(AGCCGCCT,-,0.00) 168(TCGAGGCC,+,0.00) 48(CCCACCGA,+,0.00) 308(CGGCCCGA,-,0.00) 227(CCGCTCCTCCCC,-,0.00) 199(TGGGCGGC,-,0.00) 217(GCGGGCCCAGCC,+,0.00) 312(CCGACTCG,-,0.00) 561_WT_peak_1679 chr12 49110761 49111140 + 107 NA promoter-TSS (NM_001277842) promoter-TSS (NM_001277842) -169 NM_001277842 904 Hs.92308 NM_001240 HPRD:03938 CCNT1 CCNT|CYCT1|HIVE1 cyclin T1 protein-coding 0.094987 0.600000 -140(AGAACCGGATTG,+,0.00) 204(CCCGGGAGGCGG,-,0.00) 4(GCCGGGCG,+,0.00) 112(CGTCTCTA,+,0.00) -162(AAAAACCG,+,0.00) -74(GCCGCCCA,+,0.00),8(GGCGCGGT,-,0.00) -59(CTTGGCGG,+,0.00),169(CTACTCGG,+,0.00) -107(GCTGCGAGGC,+,0.00) -106(CTGCGAGGCCGC,-,0.00) 561_WT_peak_982 chr10 45496655 45496924 + 107 NA promoter-TSS (NM_001039380) promoter-TSS (NM_001039380) -319 NM_001039380 220979 Hs.707791 NM_001039380 ENSG00000165511 C10orf25 - chromosome 10 open reading frame 25 protein-coding 0.074349 0.600000 -85(GAGCAGCAGCCC,+,0.00),-79(CAGCCCCGGCCC,+,0.00) -61(TCGCTCGG,-,0.00) -111(CCCGCGGC,-,0.00) -63(CGTCGCTC,+,0.00) 5(CGGTTTTC,-,0.00) -118(GGCGCGGC,-,0.00) -117(GCGCGGCCCGCG,+,0.00) -118(GGCGCGGCCC,-,0.00) 561_WT_peak_2930 chr16 83841475 83841671 + 107 NA promoter-TSS (NM_001537) promoter-TSS (NM_001537) 65 NM_001537 3281 Hs.250899 NM_001537 HPRD:05185 HSBP1 NPC-A-13 heat shock factor binding protein 1 protein-coding 0.112245 0.664975 -114(CCTTCCGGTGCG,-,0.00) -125(GGCCTCGA,-,0.00),-121(TCGAGGCC,+,0.00) -51(CGTCGCGA,+,0.00) -75(CGCGGTCCCGCG,+,0.00),-75(CGCGGTCCCGCG,-,0.00) -152(GGGCCGCTCC,+,0.00) 20(CCGCCAAG,-,0.00) 561_WT_peak_834 chr1 249120566 249120977 + 107 NA promoter-TSS (NM_030645) promoter-TSS (NM_030645) 195 NR_036070 100422879 NR_036070 miRBase:MI0014140 MIR3124 - microRNA 3124 ncRNA 0.060827 0.546117 -28(AGGCCTCT,+,0.00) -100(CCGTGAAGTCGG,-,0.00) -31(TCGAGGCC,+,0.00) -149(CTTCGCGG,+,0.00) 561_WT_peak_6253 chr6 29909963 29910102 + 107 NA promoter-TSS (NM_001242758) promoter-TSS (NM_001242758) -215 NM_001242758 3105 Hs.181244 NM_002116 HPRD:00826 HLA-A HLAA major histocompatibility complex, class I, A protein-coding 0.043165 0.628571 561_WT_peak_5759 chr5 55452741 55452932 + 107 NA intron (NM_024669, intron 6 of 11) LTR5_Hs|LTR|ERVK 76350 NM_024669 79722 Hs.436214 NM_024669 HPRD:07758 ANKRD55 - ankyrin repeat domain 55 protein-coding 0.010471 0.453125 -110(GGCCAGGGTGGC,-,0.00) 561_WT_peak_3288 chr17 60004759 60005310 + 107 NA non-coding (NR_026641, exon 1 of 25) non-coding (NR_026641, exon 1 of 25) 343 NR_026641 57508 Hs.279646 NM_020748 HPRD:11137 INTS2 INT2|KIAA1287 integrator complex subunit 2 protein-coding 0.072595 0.594203 -150(CCGACCGA,+,0.00) -70(AGGGGCGGGC,-,0.00) 175(GTCCGATG,-,0.00) 315(CAGAACCG,+,0.00) -130(TGGGTAAA,+,0.00),-117(TGGGTAAA,+,0.00) -146(CCGACTAG,-,0.00),41(CCGACACG,-,0.00),232(CGACTCGG,+,0.00) -66(GCGGGCTGACTG,+,0.00) 561_WT_peak_1169-2 chr10 132100017 132100224 + 107 NA Intergenic Intergenic 165481 NM_001199868 10539 Hs.42644 NM_006541 HPRD:10153 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding 0.053140 0.725962 14(CATGCCGGGCCT,-,0.00) -94(CCGCCTGCCGGG,+,0.00) -16(GCTGGGAGGC,+,0.00) -57(CCGGCCTGCCGG,+,0.00) 561_WT_peak_1911 chr12 123849127 123849348 + 107 NA TTS (NR_107039) TTS (NR_107039) 153 NR_107039 102466877 NR_107039 MIR8072 hsa-mir-8072 microRNA 8072 ncRNA 0.076923 0.716216 -152(AGGTGGCT,+,0.00) -91(CCGGGAGGGGGA,-,0.00) -28(CGGCGCCAGCAC,+,0.00) -17(CAGCTCCTCCCG,-,0.00) -43(TTTCCCCG,-,0.00) -135(GCCTGGCCCCGC,-,0.00) -137(CAGCCTGGCCCC,-,0.00) 561_WT_peak_1226 chr11 18034848 18035107 + 107 NA promoter-TSS (NM_012139) promoter-TSS (NM_012139) -268 NR_104040 26297 Hs.32470 NM_012139 HPRD:06926 SERGEF DELGEF|Gnefr secretion regulating guanine nucleotide exchange factor protein-coding 0.057915 0.569231 -28(GGGCTGACAGGG,-,0.00) -65(CGTTTTTG,-,0.00) 561_WT_peak_432 chr1 144536186 144536427 + 107 NA intron (NM_001278267, intron 52 of 130) intron (NM_001278267, intron 52 of 130) 76413 NR_003242 767846 Hs.657186 NR_003242 PFN1P2 C1orf152|COAS3 profilin 1 pseudogene 2 pseudo 0.016598 0.487603 15(TTGACGCC,+,0.00) 561_WT_peak_3009 chr17 7142924 7143151 + 107 NA promoter-TSS (NM_001284517) promoter-TSS (NM_001284517) -212 NM_024297 79142 Hs.644724 NM_024297 ENSG00000040633 PHF23 hJUNE-1b PHD finger protein 23 protein-coding 0.074890 0.653509 47(CTCGGCCACC,-,0.00) -85(AAGCCGCT,+,0.00) -104(AGGCTGGCGCAG,-,0.00) -48(AGGAGCCGGAGG,+,0.00) -68(CGGGGAGCGGCG,+,0.00) 561_WT_peak_3201 chr17 42580862 42581170 + 107 NA promoter-TSS (NR_036474) promoter-TSS (NR_036474) -59 NR_036474 23131 Hs.463129 NM_001002909 GPATCH8 GPATC8|KIAA0553 G patch domain containing 8 protein-coding 0.107143 0.653722 128(TGGGCCGAAAGC,+,0.00) -47(CGCGTGCG,+,0.00) -34(CCGCCCGA,+,0.00) -136(CCCGCGGC,-,0.00) -56(CGGTGGCCGCGC,-,0.00) -86(CCCTGCTCCGCG,-,0.00) -138(GCCCCGCGGC,-,0.00) 561_WT_peak_4926 chr22 40357468 40357797 + 107 NA intron (NM_001291828, intron 2 of 4) intron (NM_001291828, intron 2 of 4) 14811 NM_001291825 9402 Hs.517499 NM_004810 HPRD:05156 GRAP2 GADS|GRAP-2|GRB2L|GRBLG|GRID|GRPL|GrbX|Grf40|Mona|P38 GRB2-related adaptor protein 2 protein-coding 0.024316 0.472727 -136(CAAGACCG,+,0.00),116(CAAAACCT,+,0.00) 561_WT_peak_514 chr1 150459965 150460152 + 107 NA intron (NR_073513, intron 1 of 13) intron (NR_073513, intron 1 of 13) 218 NR_073514 80222 Hs.288974 NM_025150 HPRD:18148 TARS2 COXPD21|TARSL1|thrRS threonyl-tRNA synthetase 2, mitochondrial (putative) protein-coding 0.053476 0.542553 561_WT_peak_408 chr1 117312331 117312593 + 107 NA TTS (NM_001767) TTS (NM_001767) 15376 NM_001767 914 Hs.523500 NM_001767 HPRD:01750 CD2 LFA-2|SRBC|T11 CD2 molecule protein-coding 0.003817 0.452471 561_WT_peak_1335 chr11 64646318 64646527 + 107 NA promoter-TSS (NM_006795) promoter-TSS (NM_006795) -182 NM_006795 10938 Hs.523774 NM_006795 HPRD:09325 EHD1 H-PAST|HPAST1|PAST|PAST1 EH-domain containing 1 protein-coding 0.133971 0.738095 6(GCCGCGCC,+,0.00) 561_WT_peak_3991 chr2 26257051 26257437 + 107 NA 5' UTR (NM_016131, exon 1 of 6) 5' UTR (NM_016131, exon 1 of 6) 515 NM_016131 10890 Hs.467960 NM_016131 HPRD:06692 RAB10 - RAB10, member RAS oncogene family protein-coding 0.113990 0.697674 11(CCGACTCCCCGG,+,0.00),25(CCGGGCGGACGG,-,0.00) -73(TCGACGGC,+,0.00),62(TCGCCGCC,+,0.00),81(TGGACGCC,+,0.00) -35(CCGGCCGA,+,0.00),7(CCGACCGA,+,0.00) 35(GGGCTGGGAGAG,-,0.00) 57(CGCGGTCGCCGC,-,0.00) 49(TGCGGAGCCGCG,+,0.00) -31(CCGAGAAG,-,0.00) 47(GCTGCGGAGC,+,0.00) 561_WT_peak_5941 chr5 137801286 137801598 + 107 NA 5' UTR (NM_001964, exon 1 of 2) 5' UTR (NM_001964, exon 1 of 2) 261 NM_001964 1958 Hs.326035 NM_001964 HPRD:00549 EGR1 AT225|G0S30|KROX-24|NGFI-A|TIS8|ZIF-268|ZNF225 early growth response 1 protein-coding 0.083333 0.690096 -138(TCGCCGCC,+,0.00) -62(CAGCTCCAGCCC,+,0.00) -39(CCCCCGCC,-,0.00) -111(CCCGCGCCCCGC,-,0.00) -148(CGAGTCGG,+,0.00) 7(GCGGCCAAGGCC,+,0.00) 117(GCTGCTGAGC,+,0.00) -91(CGGCCAGGCCCC,-,0.00) 561_WT_peak_1169 chr10 132099596 132099896 + 107 NA Intergenic Intergenic 165107 NM_001199868 10539 Hs.42644 NM_006541 HPRD:10153 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding 0.050000 0.714286 -3(CATGCCGGGCCT,-,0.00) -149(CCGCCTGCCGGG,+,0.00),70(CCGCCTGCCGGG,+,0.00) -33(GCTGGGAGGC,+,0.00),110(GCTGGGAGGC,+,0.00) 102(CAGGCCCGGCTG,+,0.00) 561_WT_peak_2731 chr16 22203523 22203644 + 107 NA Intergenic MIRc|SINE|MIR -14009 NM_013302 29904 Hs.498892 NM_013302 EEF2K HSU93850|eEF-2K eukaryotic elongation factor-2 kinase protein-coding 0.008264 0.344262 561_WT_peak_1882 chr12 120884147 120884401 + 107 NA promoter-TSS (NM_176818) promoter-TSS (NM_176818) 33 NM_176818 283459 Hs.706889 NM_176818 GATC 15E1.2 glutamyl-tRNA(Gln) amidotransferase, subunit C protein-coding 0.102362 0.678431 -2(GCCTTCGGGCCC,-,0.00) -120(GGCGGCGA,-,0.00),-117(GGCGACGA,-,0.00) -76(TCGCTCGG,-,0.00) -78(CGTCGCTC,+,0.00) 51(CAGGTAAA,+,0.00) -1(CCTTCGGGCCCC,-,0.00) 71(CTAGGCGG,+,0.00) 19(GGCGCCAGGGCT,+,0.00) 561_WT_peak_4799 chr21 40139473 40139662 + 106 NA intron (NR_027065, intron 1 of 6) intron (NR_027065, intron 1 of 6) 1331 NR_027066 400866 Hs.278704 NM_001001789 HPRD:10744 LINC00114 C21orf24|NCRNA00114 long intergenic non-protein coding RNA 114 ncRNA 0.005291 0.405263 -164(TCCACCTCCTCC,+,0.00) -160(CCTCCTCCCCTG,+,0.00) 561_WT_peak_6919 chr7 157283383 157283597 + 106 NA intron (NR_110157, intron 2 of 3) L1MB7|LINE|L1 24565 NR_110157 101927914 Hs.623826 NR_110157 LOC101927914 - uncharacterized LOC101927914 ncRNA 0.009346 0.441860 -8(TGGTTTTG,-,0.00) 561_WT_peak_6223 chr6 27805397 27806087 + 106 NA promoter-TSS (NM_003520) promoter-TSS (NM_003520) 375 NM_003510 8330 Hs.734717 NM_003510 HPRD:09100 HIST1H2AK H2A/d|H2AFD histone cluster 1, H2ak protein-coding 0.055072 0.529667 -5(AAGCCGTT,+,0.00),-4(AGCCGTTT,-,0.00),98(AGGTGGCT,+,0.00) 389(CAACACCG,+,0.00) -148(CTTTCAGCTCCC,-,0.00) -78(GCCGCGCC,+,0.00) 343(GGGCCGCGTT,+,0.00),464(CACTCGGCCC,-,0.00),486(AGACCCGCCC,-,0.00) 561_WT_peak_5775 chr5 64920413 64920873 + 106 NA promoter-TSS (NM_001093756) promoter-TSS (NM_001093756) 85 NR_003545 80006 Hs.591760 NM_024941 HPRD:07832 TRAPPC13 C5orf44 trafficking protein particle complex 13 protein-coding 0.041304 0.464208 248(CCTTCCGGGGCA,-,0.00) -128(GGGCGGTGAGGG,-,0.00) -89(CGGTTTTT,-,0.00),218(TGGTTTTG,-,0.00) 561_WT_peak_6594 chr7 11013469 11013862 + 106 NA non-coding (NR_033436, exon 1 of 17) non-coding (NR_033436, exon 1 of 17) 166 NR_033435 9678 Hs.655688 NM_014660 HPRD:17845 PHF14 - PHD finger protein 14 protein-coding 0.073791 0.591371 -117(GTATCCGGGTCG,-,0.00) 128(CCGGGGGGGCGG,-,0.00) 127(GCCGGGGG,+,0.00),135(GGCGGGGG,+,0.00) 198(CGGTTTTA,-,0.00) 31(CCGGGGCCGCCG,+,0.00),184(GGCTGGCTGCGC,-,0.00) 108(GCGGCCAGGGCC,+,0.00) 561_WT_peak_380 chr1 111991900 111992317 + 106 NA promoter-TSS (NM_024102) promoter-TSS (NM_024102) -278 NM_024102 79084 Hs.204773 NM_024102 HPRD:14387 WDR77 MEP-50|MEP50|Nbla10071|p44|p44/Mep50 WD repeat domain 77 protein-coding 0.059952 0.535885 197(GGGGTGACAGGG,-,0.00),233(GGCCTGAGAGGC,-,0.00) 137(CGGGTAAG,+,0.00) 561_WT_peak_3357 chr17 74722457 74723331 + 106 NA promoter-TSS (NM_001206987) promoter-TSS (NM_001206987) -13 NM_001081461 23210 Hs.514505 NM_015167 HPRD:05371 JMJD6 PSR|PTDSR|PTDSR1 jumonji domain containing 6 protein-coding 0.112128 0.691429 352(TCGCCTTGCTCC,+,0.00) 97(AGCCACCT,-,0.00) 133(CCGTCTTCCCCG,+,0.00),500(CCGCCCGCCCGG,+,0.00) 19(GGCGGCGA,-,0.00),147(CCGACGCC,+,0.00),518(ACGACGCC,+,0.00) 448(CCCGCGGC,-,0.00),497(CCCCCGCC,-,0.00) -152(TTGTGCCG,+,0.00),419(TCTTGCCG,+,0.00) 603(GGCCGACG,-,0.00) 160(CGGTTTTC,-,0.00) 173(GCTTTGGCTCCC,-,0.00),600(GGGGGCCGACGG,+,0.00) -115(GCCGCGCA,+,0.00),14(TGGGCGGC,-,0.00) -120(CTCCGGCCGCGC,-,0.00),561(CCGGGCCCAGCG,+,0.00) 450(CGCGGCTTCCCG,-,0.00) 10(GGCCTGGGCGGC,-,0.00) 8(CCGGCCTGGGCG,+,0.00) 561_WT_peak_1085 chr10 89621968 89622362 + 106 NA exon (NM_001126049, exon 1 of 1) exon (NM_001126049, exon 1 of 1) 1029 NM_001126049 100144748 Hs.559820 NM_001126049 ENSG00000227268 KLLN CWS4|KILLIN killin, p53-regulated DNA replication inhibitor protein-coding 0.083756 0.627848 129(GGCGGCCAAG,+,0.00) 180(CCGACGCC,+,0.00) 112(TCCTGCCG,+,0.00) 178(CTCCGACG,-,0.00) 78(CCGGGGCGCGCG,+,0.00),92(GCCTGGCCCCGG,-,0.00) 86(CGCGGAGCCTGG,+,0.00) 142(GGGCGGGGCT,+,0.00) 561_WT_peak_4034 chr2 39664588 39664824 + 106 NA promoter-TSS (NM_003618) promoter-TSS (NM_003618) 149 NR_037875 728730 Hs.655344 NR_037875 ENSG00000231312 LOC728730 - uncharacterized LOC728730 ncRNA 0.072034 0.586498 -37(AAGTGGCT,+,0.00) -107(CGCCCGGC,-,0.00) -93(CGCCGGAC,+,0.00) -117(TGCGGACCCGCG,+,0.00) 561_WT_peak_3946 chr2 3381678 3381981 + 106 NA promoter-TSS (NM_003310) promoter-TSS (NM_003310) -176 NM_003310 7260 Hs.502770 NM_003310 HPRD:10287 TSSC1 - tumor suppressing subtransferable candidate 1 protein-coding 0.095710 0.648026 -46(CGCGGAGGCCGG,-,0.00) -59(GGGCGGAGCGGG,-,0.00) 109(CGCTGGGCCAGC,-,0.00),110(GCTGGGCCAGCG,+,0.00) -86(AACCCGGCCC,-,0.00) 561_WT_peak_1979 chr13 31191617 31192118 + 106 NA promoter-TSS (NM_005800) promoter-TSS (NM_005800) 37 NM_005800 10208 Hs.533831 NM_005800 HPRD:09833 USPL1 C13orf22|D13S106E|bA121O19.1 ubiquitin specific peptidase like 1 protein-coding 0.105788 0.675299 159(TGCGGAGGGCGA,-,0.00) 272(AGCCGCCT,-,0.00) 105(TCGTCGCC,+,0.00) -96(CAGCGACG,-,0.00) 311(GTCCGAGG,-,0.00) -133(CCAGCGGCTCCC,-,0.00) -46(GCCGCGCA,+,0.00) -9(CGCTGGCGCCAC,-,0.00),87(CACCGGCCCCGC,-,0.00) 198(CCGCCACG,-,0.00) 77(GCTCAGCAGC,-,0.00) 147(CAGCCACGCCTC,-,0.00) 561_WT_peak_4350 chr2 162165014 162165325 + 106 NA intron (NM_005805, intron 1 of 11) CpG 383 NM_005805 10213 Hs.740477 NM_005805 HPRD:06208 PSMD14 PAD1|POH1|RPN11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 protein-coding 0.067524 0.657051 -87(GCATCCGGCTCC,-,0.00) -16(CTAGGCCGCC,-,0.00) 53(CCGCGAGGGAGG,-,0.00) -10(CGCCGCCAGCCC,+,0.00) 50(GGGCCGCGAGGG,-,0.00) -86(CATCCGGCTCCC,-,0.00) 561_WT_peak_2375 chr14 102431540 102431776 + 106 NA intron (NM_001376, intron 1 of 77) CpG 793 NM_001376 1778 Hs.614080 NM_001376 HPRD:02524 DYNC1H1 DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein, cytoplasmic 1, heavy chain 1 protein-coding 0.072034 0.645570 -39(GGGCTGAGAGCG,-,0.00) 14(CGGTTTCG,-,0.00) -101(GGGTCGCTTT,+,0.00),-70(TGGCCGAGTT,+,0.00) 561_WT_peak_5422 chr4 15757928 15758230 + 106 NA Intergenic Intergenic -21852 NM_001775 952 Hs.479214 NM_001775 CD38 ADPRC 1|T10 CD38 molecule protein-coding 0.016556 0.425743 561_WT_peak_3868 chr19 50836750 50837059 + 106 NA promoter-TSS (NR_110912) promoter-TSS (NR_110912) -132 NR_110912 3748 Hs.467146 NM_004977 HPRD:08886 KCNC3 KSHIIID|KV3.3|SCA13 potassium voltage-gated channel, Shaw-related subfamily, member 3 protein-coding 0.077670 0.600000 -88(GGCGTGGA,-,0.00) -29(CGTAGGCG,-,0.00) -152(CGTCGCGA,+,0.00) 47(CCTTCGCCTCCC,-,0.00) 561_WT_peak_4440 chr2 202122965 202123416 + 106 NA intron (NR_111983, intron 1 of 8) intron (NR_111983, intron 1 of 8) 436 NR_111983 841 Hs.599762 NM_001228 HPRD:03459 CASP8 ALPS2B|CAP4|Casp-8|FLICE|MACH|MCH5 caspase 8, apoptosis-related cysteine peptidase protein-coding 0.019956 0.546460 -104(CCCCCTTCCCTG,+,0.00) 53(GGGCTGTGGGGG,-,0.00) 230(CCGCCTCG,-,0.00) 561_WT_peak_2779 chr16 30482209 30482488 + 106 NA Intergenic L1MB7|LINE|L1 -1635 NM_002209 3683 Hs.174103 NM_002209 HPRD:01079 ITGAL CD11A|LFA-1|LFA1A integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) protein-coding 0.017921 0.432143 33(GCTTCCAGTTTC,-,0.00) 561_WT_peak_2574 chr15 81589149 81589353 + 105 NA promoter-TSS (NM_004513) promoter-TSS (NM_004513) -3 NM_004513 3603 Hs.459095 NM_004513 HPRD:04329 IL16 LCF|NIL16|PRIL16|prIL-16 interleukin 16 protein-coding 0.039216 0.546341 -82(CCGTTTTG,-,0.00) -64(GCTTCCTGTTTA,-,0.00) 561_WT_peak_4990 chr3 5018955 5019242 + 105 NA Intergenic Intergenic -1999 NM_003670 8553 Hs.744856 NM_003670 HPRD:16050 BHLHE40 BHLHB2|DEC1|HLHB2|SHARP-2|STRA13|Stra14 basic helix-loop-helix family, member e40 protein-coding 0.031359 0.517361 -129(TAAACAGGAAGC,+,0.00) 561_WT_peak_1702 chr12 51762850 51763040 + 105 NA intron (NM_007210, intron 4 of 11) intron (NM_007210, intron 4 of 11) -22156 NM_001267615 9498 Hs.4749 NM_004858 HPRD:05430 SLC4A8 NBC3|NDCBE solute carrier family 4, sodium bicarbonate cotransporter, member 8 protein-coding 0.031579 0.570681 -72(GGGTTTTG,-,0.00) -154(TTTCCCCG,-,0.00) 561_WT_peak_1945 chr13 21476702 21477016 + 105 NA promoter-TSS (NM_022459) promoter-TSS (NM_022459) 54 NM_022459 64328 Hs.507452 NM_022459 HPRD:18307 XPO4 exp4 exportin 4 protein-coding 0.127389 0.726984 79(CCGCGACCCCGG,+,0.00) 73(TCGCCGCC,+,0.00),126(TCGACACC,+,0.00),134(GGCGTCGC,-,0.00) -107(CCGACCGG,+,0.00) -48(TTTAGCCG,-,0.00) -73(GGCGCGGC,-,0.00) 51(AGCGGGCGCCGC,-,0.00) 136(CGTCGCGG,+,0.00) 28(CGCGCCATGCGC,+,0.00) -4(GCGCCGCCGC,-,0.00),111(CCGTCGCAGC,-,0.00),135(GCGTCGCGGC,-,0.00) 561_WT_peak_4641 chr20 42578869 42579067 + 105 NA intron (NM_001098798, intron 1 of 7) intron (NM_001098798, intron 1 of 7) 4432 NM_001098798 84969 Hs.26608 NM_032883 HPRD:12734 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding 0.040404 0.613065 -118(AAGCGGAT,+,0.00) -136(AGGAAGAAGCCG,+,0.00) 9(GCTTCCTCTTTC,-,0.00) -41(CGCTGGCTCCCC,-,0.00) -66(GCTCTGCAGC,-,0.00) 561_WT_peak_6708 chr7 72936411 72936614 + 105 NA 5' UTR (NM_032408, exon 1 of 20) 5' UTR (NM_032408, exon 1 of 20) 103 NM_032408 9031 Hs.743372 NM_023005 HPRD:10416 BAZ1B WBSCR10|WBSCR9|WSTF bromodomain adjacent to zinc finger domain, 1B protein-coding 0.137931 0.725490 12(TTCCCCTCCTCC,+,0.00) 16(CCTCCTCCCCCG,+,0.00) -80(CCCCCGCC,-,0.00) -65(GCTTCGGGTCCC,-,0.00) -158(GGCGCGGC,-,0.00),-110(CCCGCGCA,+,0.00),-98(GCCGCGCC,+,0.00) -162(CGCCGGCGCGGC,-,0.00),24(CCCGGGCCCGGC,-,0.00) -156(CGCGGCCGCGCG,-,0.00) -93(GCCTCCCAGC,-,0.00) 561_WT_peak_5451 chr4 39460314 39460871 + 105 NA promoter-TSS (NM_194451) promoter-TSS (NM_194451) -24 NM_000661 6133 Hs.412370 NM_000661 HPRD:04732 RPL9 L9|NPC-A-16 ribosomal protein L9 protein-coding 0.075404 0.587814 86(CGCGTAAG,+,0.00) -153(AGGGGCGGGA,-,0.00) -164(CGGCAAGA,-,0.00) 180(GAGCGACG,-,0.00) 322(CGGGTTTG,-,0.00) -41(GCCGCGCC,+,0.00) 312(GCGGGGCGAACG,+,0.00) -38(GCGCCGCAGC,-,0.00),309(GCGGCGGGGC,+,0.00) 155(GCAGCTTGGCTG,+,0.00) 561_WT_peak_6992 chr8 41997544 41997810 + 105 NA Intergenic CpG -12787 NM_001134296 10947 Hs.654529 NM_006803 HPRD:09801 AP3M2 AP47B|CLA20|P47B adaptor-related protein complex 3, mu 2 subunit protein-coding 0.127820 0.726592 -145(GGAGCAGGCGGA,-,0.00) 77(AGGTGTCT,+,0.00),87(AGGTGTCT,+,0.00) -76(TCGGGCGG,-,0.00) 36(CGCTCCCAGCCC,+,0.00) -139(GGCGGAGCTGCG,+,0.00),28(CGCGGAGACGCT,+,0.00) -22(AGCCAAGGCGGC,-,0.00) 561_WT_peak_4679 chr20 49126919 49127251 + 105 NA exon (NM_002827, exon 1 of 10) exon (NM_002827, exon 1 of 10) 227 NM_001278618 5770 Hs.417549 NM_002827 HPRD:01477 PTPN1 PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding 0.087349 0.672673 -150(AGCGGCTA,-,0.00),83(AGGCCGCT,+,0.00) -53(CCGAGAAGGAGG,-,0.00) -99(GGGCTAAGAGCG,-,0.00),-56(GGGCCGAGAAGG,-,0.00) 37(TTTACCAG,-,0.00) 27(TGGGCGGC,-,0.00) -87(CGACGCGG,+,0.00),-53(CCGAGAAG,-,0.00),64(CGTGGCGG,+,0.00) -34(GCCGCCCTGGCC,+,0.00) 561_WT_peak_2192 chr14 50234973 50235573 + 105 NA exon (NM_014315, exon 1 of 13) exon (NM_014315, exon 1 of 13) 486 NM_014315 23588 Hs.509264 NM_014315 HPRD:08824 KLHDC2 HCLP-1|HCLP1|LCP kelch domain containing 2 protein-coding 0.105000 0.658902 -119(CGAGGAGGCTGG,-,0.00) -142(GGCGGCGGAG,+,0.00),-93(GGCGGCAGAG,+,0.00),286(GGCCGCCGAG,+,0.00) -85(AGAGGCCT,-,0.00) -78(TCAACGCC,+,0.00) 256(CGTTCGCG,-,0.00) 232(TCGCTCGG,-,0.00) -41(TCGCGCCG,+,0.00) 163(CAGCGACG,-,0.00),230(CGTCGCTC,+,0.00) 223(CGACGGAC,+,0.00) 220(CCGCGACG,-,0.00) 261(GCGGCCAGGCGG,+,0.00) 561_WT_peak_5530 chr4 84152858 84153153 + 105 NA Intergenic Intergenic 53062 NM_015697 27235 Hs.144304 NM_015697 HPRD:13062 COQ2 CL640|COQ10D1|MSA1 coenzyme Q2 4-hydroxybenzoate polyprenyltransferase protein-coding 0.003390 0.429054 -20(GGGCTGATTT,+,0.00) 561_WT_peak_4670 chr20 48210674 48211157 + 105 NA Intergenic Charlie8|DNA|hAT-Charlie -26208 NM_000961 5740 Hs.302085 NM_000961 HPRD:09046 PTGIS CYP8|CYP8A1|PGIS|PTGI prostaglandin I2 (prostacyclin) synthase protein-coding 0.014493 0.473140 168(ATGTGGCT,+,0.00) 308(CCTTCGGCTGCA,-,0.00) 561_WT_peak_3298 chr17 62128561 62128781 + 105 NA intron (NM_001433, intron 17 of 21) L1MC4|LINE|L1 -30677 NM_001099787 3384 Hs.431460 NM_000873 HPRD:00888 ICAM2 CD102 intercellular adhesion molecule 2 protein-coding 0.000000 0.411765 561_WT_peak_5841 chr5 81573811 81574536 + 105 NA promoter-TSS (NM_001025) promoter-TSS (NM_001025) 62 NM_001025 6228 Hs.527193 NM_001025 HPRD:04729 RPS23 S23 ribosomal protein S23 protein-coding 0.082759 0.617080 -27(CTCGGCGGCC,-,0.00) -17(TCCACGCC,+,0.00),172(TCGGCGCC,+,0.00) 486(GCGCAGGCGCTC,-,0.00) 39(CCCCGGCCCT,+,0.00) 74(CCCCCGCC,-,0.00) 7(CGCCGGAC,+,0.00) 275(GCCGCGCC,+,0.00),483(ACCGCGCA,+,0.00) 238(AGCCCCGCCC,-,0.00) 174(GGCGCCACGGGC,+,0.00) 561_WT_peak_3114 chr17 30669044 30669358 + 105 NA promoter-TSS (NM_022344) promoter-TSS (NM_022344) 27 NM_022344 64149 Hs.655257 NM_022344 C17orf75 NJMU-R1 chromosome 17 open reading frame 75 protein-coding 0.079618 0.647619 -162(TAGTGGCT,+,0.00) -74(TCGACTCC,+,0.00) 35(TCCCGGCCCT,+,0.00) -145(CGGCTCGA,-,0.00) 11(CGTCGGTA,+,0.00) 123(GGGCTGACAGGC,-,0.00) -17(CCAAACCG,+,0.00) 66(TTTCCCCG,-,0.00) 27(CGTCCGGCTCCC,-,0.00) 561_WT_peak_2508 chr15 64126327 64126608 + 105 NA promoter-TSS (NM_003922) promoter-TSS (NM_003922) -320 NM_003922 8925 Hs.210385 NM_003922 HPRD:06894 HERC1 p532|p619 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding 0.078292 0.680851 -91(GAATCCGGGCAG,-,0.00) -77(CCGACCGC,+,0.00) 83(GCAGGGCCAGGG,+,0.00) -98(CGTCGCGG,+,0.00) 561_WT_peak_4493 chr2 232478537 232479026 + 105 NA Intergenic CpG 21206 NM_152614 165100 Hs.98104 NM_152614 HPRD:14602 C2orf57 - chromosome 2 open reading frame 57 protein-coding 0.106339 0.710204 271(GGGGGCCGAG,+,0.00) 221(CCCCCTCCCCGC,+,0.00) 309(GGCGGCGA,-,0.00) 34(CGTCCGCG,-,0.00) -164(CCCCCGCC,-,0.00),268(GGCGGGGG,+,0.00) 168(TGCGCGGC,-,0.00) 21(AACTCGGCAC,-,0.00),284(AGCCCCGCCC,-,0.00) 561_WT_peak_857 chr10 5339359 5339655 + 105 NA Intergenic MLT1C|LTR|ERVL-MaLR -67469 NM_053049 114131 Hs.511775 NM_053049 HPRD:12066 UCN3 SCP|SPC|UCNIII urocortin 3 protein-coding 0.006757 0.430976 114(CGGCATGA,-,0.00) -43(CAGTTTTG,-,0.00) 561_WT_peak_4259 chr2 112641508 112641729 + 105 NA 5' UTR (NM_022662, exon 1 of 48) 5' UTR (NM_022662, exon 1 of 48) 123 NM_022662 64682 Hs.436527 NM_022662 HPRD:09769 ANAPC1 APC1|MCPR|TSG24 anaphase promoting complex subunit 1 protein-coding 0.099548 0.684685 -20(TCCCTCCCCT,+,0.00) -131(GGCGCGGC,-,0.00) 561_WT_peak_4045 chr2 43361241 43361464 + 105 NA Intergenic Intergenic 92393 NM_006887 678 Hs.503093 NM_006887 HPRD:18319 ZFP36L2 BRF2|ERF-2|ERF2|RNF162C|TIS11D ZFP36 ring finger protein-like 2 protein-coding 0.035874 0.531250 12(CTCTGCCGCC,-,0.00) -19(AGACGCTA,-,0.00),3(AGCCACTT,-,0.00) -128(TGGTTTTG,-,0.00) 561_WT_peak_5330 chr3 177077721 177078002 + 105 NA Intergenic Intergenic 65631 NR_047465 100820709 Hs.518409 NR_047465 LINC00501 - long intergenic non-protein coding RNA 501 ncRNA 0.071174 0.613475 -89(CCGCGCTGCCGG,+,0.00) -130(CCCCCGCC,-,0.00) 95(CTTGGCGG,+,0.00) 561_WT_peak_4268 chr2 113932853 113933095 + 105 NA intron (NM_012455, intron 1 of 16) intron (NM_012455, intron 1 of 16) 1414 NM_012455 23550 Hs.516306 NM_012455 HPRD:15191 PSD4 EFA6B|TIC pleckstrin and Sec7 domain containing 4 protein-coding 0.016529 0.572016 33(AGAGGCCT,-,0.00),35(AGGCCTCT,+,0.00) 56(AGGCCAGGGA,-,0.00) 561_WT_peak_5087 chr3 46019960 46020123 + 105 NA intron (NM_024513, intron 4 of 17) intron (NM_024513, intron 4 of 17) 17275 NM_024513 79443 Hs.200227 NM_024513 HPRD:06215 FYCO1 CATC2|CTRCT18|RUFY3|ZFYVE7 FYVE and coiled-coil domain containing 1 protein-coding 0.006135 0.481707 -22(CAGCCAAGCAGC,-,0.00) 561_WT_peak_5584 chr4 119512735 119512757 + 105 NA promoter-TSS (NR_109983) promoter-TSS (NR_109983) -153 NR_109983 729218 Hs.448518 NR_103825 LOC729218 - uncharacterized LOC729218 pseudo 0.000000 0.217391 561_WT_peak_6570 chr7 1609720 1610042 + 105 NA promoter-TSS (NM_032302) promoter-TSS (NM_032302) 172 NR_021487 114796 Hs.436146 NR_021487 ENSG00000230487 PSMG3-AS1 - PSMG3 antisense RNA 1 (head to head) ncRNA 0.102484 0.705882 -92(CCGCGCTGCCGG,+,0.00),-20(CCCCCGTCCCGG,+,0.00) 148(TCGTCGCC,+,0.00) -14(TCCCGGGCCT,+,0.00),106(GCCCGGCCCT,+,0.00) 24(CGTCGCTG,+,0.00),149(CGTCGCCA,+,0.00) 76(GCCGCGCC,+,0.00) 105(AGCCCGGCCC,-,0.00) 561_WT_peak_6615 chr7 23221566 23222048 + 105 NA exon (NM_007342, exon 1 of 7) exon (NM_007342, exon 1 of 7) 361 NM_007342 11097 Hs.408241 NM_007342 HPRD:14855 NUPL2 CG1|NLP-1|NLP_1|hCG1 nucleoporin like 2 protein-coding 0.089212 0.614907 59(GGAGGAGGACGG,-,0.00) 206(CGGCCTTGCCGG,+,0.00) -114(GGCGCCGA,-,0.00),-76(GGCATCGA,-,0.00),-39(GCGACGCC,+,0.00) -118(GCCGGGCG,+,0.00) -41(CAGCGACG,-,0.00),-32(CGTCGCAA,+,0.00) 139(GTCCGCCG,-,0.00) 147(GCGGGGACCGGG,+,0.00) 7(GTGCCGCTTT,+,0.00) 198(CCGCGTCG,-,0.00),201(CGTCGCGG,+,0.00) -31(GTCGCAATGGCC,+,0.00),207(GGCCTTGCCGGC,-,0.00) 200(GCGTCGCGGC,-,0.00) 205(GCGGCCTTGCCG,+,0.00) 561_WT_peak_3359 chr17 75136228 75136761 + 105 NA promoter-TSS (NM_001143999) promoter-TSS (NM_001143999) -511 NM_001039573 6397 Hs.464184 NM_003003 HPRD:03295 SEC14L1 PRELID4A|SEC14L SEC14-like 1 (S. cerevisiae) protein-coding 0.082552 0.674157 84(TCCGCCTCCTCC,+,0.00),325(TCCGCCTCCGCC,+,0.00) 19(ATGCCGCT,+,0.00),185(AGCCGCCA,-,0.00) 114(GCGGTCGG,-,0.00) -23(CCCGCGGC,-,0.00) -19(CGGCCCGA,-,0.00) 273(CCCGCTCAGCCG,+,0.00) 243(TGGTTTTG,-,0.00) 269(TTTTCCCG,-,0.00) 67(GCCGCGCA,+,0.00) -49(CCCTGGGCGCGC,-,0.00),355(GCCCGGCCCCGC,-,0.00) 354(AGCCCGGCCC,-,0.00) 186(GCCGCCAGGGCG,+,0.00),188(CGCCAGGGCGAC,-,0.00) 67(GCCGCGCAGC,-,0.00) 353(CAGCCCGGCCCC,-,0.00) 561_WT_peak_4853 chr22 22121452 22121667 + 105 NA intron (NM_002745, intron 8 of 8) intron (NM_002745, intron 8 of 8) -31488 NM_013313 29799 Hs.517436 NM_013313 HPRD:16277 YPEL1 - yippee-like 1 (Drosophila) protein-coding 0.000000 0.527778 -23(AGCCACAT,-,0.00) 11(CCAGCTCAGCCC,+,0.00) 561_WT_peak_2854 chr16 57481325 57481725 + 105 NA promoter-TSS (NM_020313) promoter-TSS (NM_020313) -156 NM_020313 57019 Hs.4900 NM_020313 HPRD:12338 CIAPIN1 2810413N20Rik|Anamorsin|DRE2|PRO0915 cytokine induced apoptosis inhibitor 1 protein-coding 0.110000 0.723192 148(AGCCGCCT,-,0.00) -39(CCGGGCGGGCTG,-,0.00),30(CGGGGAGCGCGG,-,0.00) -40(GCCGGGCG,+,0.00) 21(GGGGAGAGGCGG,+,0.00) -153(GAGCGACG,-,0.00),-117(CGTAGCTA,+,0.00) 69(GTTCGACG,-,0.00) -68(GCGGCGGCGGCG,+,0.00) -101(GTCGCCGTGGGC,+,0.00) -15(GCTGCGATGC,+,0.00),10(GCTGCCAAGC,+,0.00),197(GCAGCGGGGC,+,0.00) 11(CTGCCAAGCCGG,-,0.00) 561_WT_peak_5782 chr5 66502837 66503218 + 104 NA Intergenic Intergenic -10410 NM_005582 4064 Hs.87205 NM_005582 HPRD:03749 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding 0.007874 0.473822 56(AAGCGGTT,+,0.00) 192(CTGGCCATGGCC,+,0.00),194(GGCCATGGCCCA,-,0.00) 561_WT_peak_3256 chr17 55038164 55038453 + 104 NA exon (NM_004645, exon 1 of 7) exon (NM_004645, exon 1 of 7) 103 NM_004645 8161 Hs.532795 NM_004645 HPRD:02605 COIL CLN80|p80-coilin coilin protein-coding 0.086505 0.634483 -125(AGAGGCCT,-,0.00) 109(TCGGGCGG,-,0.00) -154(GGCGGGGG,+,0.00) 5(CGGGTAAT,+,0.00) -59(CGACTCGG,+,0.00),35(CGTCTCGG,+,0.00) 561_WT_peak_195 chr1 40626979 40627284 + 104 NA promoter-TSS (NM_012421) promoter-TSS (NM_012421) 90 NM_012421 6018 Hs.205627 NM_012421 HPRD:01614 RLF ZN-15L|ZNF292L rearranged L-myc fusion protein-coding 0.098361 0.686275 -141(GGCGGCCGGG,+,0.00) 7(GGAGTCGA,-,0.00) -34(GGGCTGGGGCTG,-,0.00),-28(GGGCTGAGGCTC,-,0.00) -97(CCTACGCG,-,0.00) -137(GCCGGGGG,+,0.00) -6(GGGAGCCGGAGA,+,0.00) -147(TGCGCGGG,-,0.00) -136(CCGGGGGCAGGG,+,0.00),-130(GCAGGGCCAGGG,+,0.00),-45(CGCTGTCGCCGG,-,0.00) 561_WT_peak_801 chr1 234746892 234747139 + 104 NA Intergenic CpG -1744 NM_001077397 359948 Hs.350268 NM_182972 HPRD:17160 IRF2BP2 - interferon regulatory factor 2 binding protein 2 protein-coding 0.093117 0.705645 -66(CCGCCGTCCCGC,+,0.00) -43(CCGACGGA,+,0.00) -158(GGGAGGCGAGGG,+,0.00) -120(CTCGCCTCCGCG,-,0.00) -97(GGCCGTGGGGGC,-,0.00) -80(GCTGGCTGGCTG,+,0.00),-13(CACCCAGGCCGG,-,0.00) 561_WT_peak_3564 chr19 2085265 2085697 + 104 NA intron (NM_130807, intron 1 of 4) intron (NM_130807, intron 1 of 4) 10788 NM_130807 126308 Hs.744938 NM_130807 HPRD:17583 MOB3A MOB1C|MOBKL2A|moblak MOB kinase activator 3A protein-coding 0.032407 0.554273 7(CCCACCGA,+,0.00) 192(GCCCAGCCCT,+,0.00) 259(GGCGCGGT,-,0.00) 184(GCCTGGCAGC,-,0.00) 181(CCGGCCTGGCAG,+,0.00) 561_WT_peak_4915 chr22 39097135 39097528 + 104 NA promoter-TSS (NM_014876) promoter-TSS (NM_014876) -872 NM_014876 9929 Hs.3094 NM_014876 HPRD:08823 JOSD1 dJ508I15.2 Josephin domain containing 1 protein-coding 0.099237 0.682741 -36(TGGACGCC,+,0.00) 164(TCGGTCGG,-,0.00),197(CCGACCGT,+,0.00) 201(CCGTGCCG,+,0.00) -126(GCTGCGCA,+,0.00),-75(GGCGCGGC,-,0.00) -75(GGCGCGGCCC,-,0.00) -69(GCCCCTGGCGGG,-,0.00) 13(CAGCCAGGCCAG,-,0.00) 561_WT_peak_6286 chr6 32753746 32753958 + 104 NA Intergenic Intergenic -22522 NM_001300790 3120 Hs.731563 NM_182549 HPRD:09983 HLA-DQB2 HLA-DQB1|HLA-DXB major histocompatibility complex, class II, DQ beta 2 protein-coding 0.000000 0.478873 561_WT_peak_2919 chr16 80574442 80574750 + 104 NA promoter-TSS (NM_130897) promoter-TSS (NM_130897) -258 NM_130897 83657 Hs.98849 NM_130897 HPRD:06204 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein, light chain, roadblock-type 2 protein-coding 0.032468 0.521036 23(AAGTGGTT,+,0.00) 102(CTTCCCTCCCGG,+,0.00) 42(TCGTGCCT,+,0.00) 561_WT_peak_4632 chr20 37075102 37075584 + 104 NA promoter-TSS (NR_003239) promoter-TSS (NR_003239) 46 NR_003239 128439 Hs.16936 NM_139016 HPRD:11814 SNHG11 C20orf198|LINC00101|NCRNA00101 small nucleolar RNA host gene 11 (non-protein coding) ncRNA 0.066390 0.633540 105(TCAGCCTCCTCC,+,0.00) 147(GTCCTGGCGCTC,-,0.00) -133(TGGGTAAA,+,0.00),130(TGTACCCG,-,0.00) 34(GCCGCGCC,+,0.00) 2(GGGGCCCGGCGG,+,0.00),32(CAGCCGCGCCCC,-,0.00),93(GCGGCCTGCCCC,+,0.00) 561_WT_peak_777 chr1 228763792 228764066 + 104 NA Intergenic CpG -16465 NR_037962 58480 Hs.647774 NM_021205 HPRD:06965 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding 0.072993 0.621818 92(GCCCGGCCCG,+,0.00) 91(AGCCCGGCCC,-,0.00) 67(GGCGCCTGGCTG,+,0.00),94(CCGGCCCGGCCG,+,0.00) 561_WT_peak_2433 chr15 39916981 39917273 + 104 NA intron (NM_152597, intron 10 of 11) intron (NM_152597, intron 10 of 11) 43847 NM_003246 7057 Hs.164226 NM_003246 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding 0.010274 0.484642 -110(CAAAAAGGAAGC,+,0.00) -4(CAGCCAGGAGGC,-,0.00),107(GGGGCCTGGCAT,+,0.00) 561_WT_peak_7634 chrX 155260008 155260433 + 104 NA Intergenic (TTAGGG)n|Simple_repeat|Simple_repeat -2372 NR_110561 727856 Hs.740212 NR_110561 DDX11L16 - DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 like 16 pseudo 0.000000 0.514085 561_WT_peak_3835 chr19 49122225 49122593 + 104 NA promoter-TSS (NM_020126) promoter-TSS (NM_020126) -139 NM_001243876 56848 Hs.528006 NM_020126 HPRD:06157 SPHK2 SK 2|SK-2|SPK 2|SPK-2 sphingosine kinase 2 protein-coding 0.089674 0.653117 169(GCCGGGCG,+,0.00) 109(GTGCGACG,-,0.00) -50(CAAAACCA,+,0.00) 65(CGGGGAAA,+,0.00) 112(CGACGCGG,+,0.00) 561_WT_peak_929 chr10 28821696 28822016 + 104 NA promoter-TSS (NM_016628) promoter-TSS (NM_016628) 339 NM_100264 51322 Hs.743224 NM_016628 HPRD:18291 WAC BM-016|PRO1741|Wwp4 WW domain containing adaptor with coiled-coil protein-coding 0.103125 0.676012 -58(GGCGCCCGAG,+,0.00) -109(AGGCGGCT,+,0.00) -53(CCGAGCGA,+,0.00) -94(TGCGCAGC,-,0.00) 62(CCGGAGCCAGCC,+,0.00) 86(GGGCGGTGTT,+,0.00) -17(CCGACTCG,-,0.00) 141(GGGGCCCGGCGG,+,0.00) 561_WT_peak_6045 chr5 179125011 179125601 + 104 NA promoter-TSS (NM_001746) promoter-TSS (NM_001746) -624 NM_001024649 821 Hs.567968 NM_001746 HPRD:00252 CANX CNX|IP90|P90 calnexin protein-coding 0.061017 0.539763 165(GGCGACGA,-,0.00) 258(GGCCAGGCGCTC,-,0.00) 301(CGCGTTCG,+,0.00) 337(CGTCGGAC,+,0.00) 174(GCTGCGCA,+,0.00) 216(GCGGCGCCGGCT,+,0.00) 235(CGCGGAGCAGTG,+,0.00) 189(GGGCCGAGCC,+,0.00),297(GGCCCGCGTT,+,0.00) 561_WT_peak_1977 chr13 31038395 31038679 + 104 NA intron (NM_002128, intron 1 of 4) intron (NM_002128, intron 1 of 4) 1544 NM_002128 3146 Hs.434102 NM_002128 HPRD:01228 HMGB1 HMG1|HMG3|SBP-1 high mobility group box 1 protein-coding 0.088028 0.631579 82(CGCGGCCGAG,+,0.00) 52(CCCCCGCC,-,0.00) -128(CGGTTTGG,-,0.00) -69(CGAGTAAA,+,0.00) 38(TGCGCGGG,-,0.00) -161(GCGGTGCCACCG,+,0.00),41(GCGGGGCGAGCC,+,0.00),73(CGGTGGCCGCGC,-,0.00) 99(GACGCGGCCC,-,0.00) 102(GCGGCCCGGCTC,+,0.00) 561_WT_peak_7045 chr8 67579887 67580144 + 104 NA promoter-TSS (NM_025054) promoter-TSS (NM_025054) 228 NM_001204173 100533105 Hs.613417 NM_001204173 C8orf44-SGK3 - C8orf44-SGK3 readthrough protein-coding 0.023346 0.472868 561_WT_peak_4794 chr21 38738181 38738475 + 104 NA Intergenic Intergenic -1531 NM_101395 1859 Hs.368240 NM_001396 HPRD:09018 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A protein-coding 0.125850 0.715254 -57(GCCGCCGGGCCC,-,0.00) -111(CTCGGGCGCC,-,0.00),91(CGCGGCCGCC,-,0.00) 68(AACCGGCT,+,0.00) 49(GCCCGCCAGCCC,+,0.00) 81(CGCGGACG,+,0.00) -85(CCGACCGG,+,0.00) -89(CGGCCCGA,-,0.00) -100(CAAAACCT,+,0.00) -93(TGGGCGGC,-,0.00),-13(GGCGCGGC,-,0.00) -55(CGCCGGGCCCGG,-,0.00),-53(CCGGGCCCGGCG,+,0.00) 561_WT_peak_2184 chr14 45430736 45431679 + 104 NA promoter-TSS (NM_017658) promoter-TSS (NM_017658) -28 NM_017658 54813 Hs.550906 NM_017658 HPRD:12539 KLHL28 BTBD5 kelch-like family member 28 protein-coding 0.046660 0.568856 -154(GGAGAAGGGGGA,-,0.00) 435(ATTTCCGGGTCA,-,0.00) 726(TGGCGGCT,+,0.00) 536(GGGCTCAGACGG,-,0.00) 483(CGGTTTGG,-,0.00) 95(CGGGCAAA,+,0.00),440(CGGGTCAA,+,0.00) 586(CGGCCTGGCGGC,-,0.00),721(CTGCATGGCGGC,-,0.00) 585(GCGGCCTGGCGG,+,0.00) 561_WT_peak_4017 chr2 30670331 30670851 + 104 NA intron (NM_182551, intron 1 of 6) CpG 454 NM_001002257 253558 Hs.468048 NM_182551 HPRD:17458 LCLAT1 1AGPAT8|AGPAT8|ALCAT1|HSRG1849|LYCAT|UNQ1849 lysocardiolipin acyltransferase 1 protein-coding 0.080769 0.656430 -24(AAGCGACT,+,0.00) 209(GGCTTCGA,-,0.00) -164(GAGCTGCAGCCC,+,0.00) 44(GCCGCGGG,+,0.00) -59(TAGCGTCG,-,0.00),-56(CGTCGCTG,+,0.00) 50(GGGCGAAGAGGG,-,0.00) 89(CAAAACCT,+,0.00) -108(CGGGTAAC,+,0.00) -30(GCGGGGAAGC,+,0.00),44(GCCGCGGGGC,+,0.00) 561_WT_peak_1849 chr12 110517275 110517953 + 104 NA Intergenic Intergenic -12114 NM_207435 400073 Hs.44817 NM_207435 HPRD:13443 C12orf76 - chromosome 12 open reading frame 76 protein-coding 0.017699 0.472754 355(GGCGTCAA,-,0.00) -135(GAAGTAGGAAGC,+,0.00) 561_WT_peak_3516 chr18 59854538 59854805 + 104 NA promoter-TSS (NM_012327) promoter-TSS (NM_012327) 147 NM_020854 57614 Hs.465323 NM_020854 HPRD:13866 KIAA1468 HsT3308|HsT885 KIAA1468 protein-coding 0.063670 0.638060 39(GGCGGCGA,-,0.00) -8(CGTCGGAA,+,0.00) 42(GGCGATGGCGCC,-,0.00) 561_WT_peak_1909 chr12 123465243 123465503 + 104 NA TTS (NM_024623) TTS (NM_024623) 766 NM_001002252 51329 Hs.103561 NM_016638 HPRD:09640 ARL6IP4 SFRS20|SR-25|SRp25|SRrp37 ADP-ribosylation factor-like 6 interacting protein 4 protein-coding 0.130769 0.770115 43(GCCTCCGGGCAC,-,0.00) -124(GGCGGTCGAG,+,0.00) 47(CCGGGCACGGGG,-,0.00) -81(GGCGGCGA,-,0.00) -10(CGGCGGAC,+,0.00) -149(GCGGGGCGGGCT,+,0.00) -32(AAAGCGCCCC,-,0.00) -71(CCGCGAAG,-,0.00) -80(GCGGCGAGGC,+,0.00) -79(CGGCGAGGCCGC,-,0.00) 561_WT_peak_7299 chr9 74398022 74398355 + 104 NA Intergenic Intergenic -14388 NM_001135820 23670 Hs.494146 NM_013390 HPRD:09317 TMEM2 - transmembrane protein 2 protein-coding 0.024024 0.541916 561_WT_peak_1837 chr12 106751452 106751804 + 104 NA promoter-TSS (NM_001160708) promoter-TSS (NM_001160708) 192 NM_018082 55703 Hs.62696 NM_018082 HPRD:11447 POLR3B C128|HLD8|RPC2 polymerase (RNA) III (DNA directed) polypeptide B protein-coding 0.096591 0.651558 -11(CAGGGAAGGCGG,-,0.00) 92(GGCGCCGA,-,0.00) -122(CGGGCAGGGA,-,0.00) -91(CGTCTCTA,+,0.00) -52(TCCGCGCA,+,0.00) 561_WT_peak_549 chr1 155532144 155532466 + 104 NA promoter-TSS (NM_018489) promoter-TSS (NM_018489) 19 NM_018489 55870 Hs.491060 NM_018489 HPRD:06416 ASH1L ASH1|ASH1L1|KMT2H ash1 (absent, small, or homeotic)-like (Drosophila) protein-coding 0.139752 0.730650 142(TTCGGCCGCC,-,0.00) 61(CGTCCGCG,-,0.00),72(CGCGCACG,+,0.00),86(CGCACGCG,-,0.00),90(CGCGTACG,+,0.00),92(CGTACGAG,-,0.00) 50(CCGCCCGA,+,0.00) 112(CGTCGCTG,+,0.00) 44(CCCGCTCCGCCC,+,0.00) 140(CCTTCGGCCGCC,-,0.00) 70(AGCGCGCA,+,0.00) -91(GCGGCGGCGGCG,+,0.00),-88(GCGGCGGCGGCG,+,0.00),-85(GCGGCGGCGGCG,+,0.00) 64(CCGCGTAG,-,0.00) 561_WT_peak_2176 chr14 36211765 36211918 + 103 NA intron (NM_194301, intron 10 of 39) MER6A|DNA|TcMar-Tigger 66509 NR_104269 26134 Hs.113150 NR_104269 RALGAPA1P GARNL2|GARNL2P|bA235C23.1 Ral GTPase activating protein, alpha subunit 1 (catalytic) pseudogene pseudo 0.006536 0.331169 561_WT_peak_6039 chr5 178286785 178287064 + 103 NA promoter-TSS (NM_058230) promoter-TSS (NM_058230) -30 NM_058230 117608 Hs.724051 NM_058230 ZNF354B KID2 zinc finger protein 354B protein-coding 0.086022 0.657143 -4(AGAGGCCT,-,0.00) 91(CGTCGGAG,+,0.00) -145(GAACCAGGAACC,+,0.00) 38(TCTGCGGAGC,+,0.00) 561_WT_peak_4744 chr21 15755513 15755718 + 103 NA promoter-TSS (NM_006948) promoter-TSS (NM_006948) -106 NM_006948 6782 Hs.352341 NM_006948 HPRD:03061 HSPA13 STCH heat shock protein 70kDa family, member 13 protein-coding 0.073171 0.626214 -5(CGGCAGGA,-,0.00) 561_WT_peak_6410 chr6 99873373 99873951 + 103 NA promoter-TSS (NM_015491) promoter-TSS (NM_015491) -455 NM_032870 25957 Hs.520287 NM_015491 HPRD:10787 PNISR C6orf111|HSPC306|SFRS18|SRrp130|bA98I9.2 PNN-interacting serine/arginine-rich protein protein-coding 0.048443 0.502591 119(AGCGGCAT,-,0.00) 323(CCCCCTTCCGGG,+,0.00) -136(CCGACCCA,+,0.00),248(TGGGTCGG,-,0.00) -59(TAGCAACG,-,0.00) 370(CGGTTTTT,-,0.00) 383(TTTATCCG,-,0.00) 275(AGCTGACCCCGC,-,0.00) 155(CTTCTCGG,+,0.00) 561_WT_peak_2179 chr14 39639188 39639884 + 103 NA promoter-TSS (NM_001079537) promoter-TSS (NM_001079537) 98 NM_177452 122553 Hs.13303 NM_177452 HPRD:18221 TRAPPC6B TPC6 trafficking protein particle complex 6B protein-coding 0.063218 0.581062 -129(TCCCCCTGCTCC,+,0.00),460(GGCGGAGGCGGG,-,0.00) 21(AGCGACTT,-,0.00) 236(GGCGGGGG,+,0.00) 515(CGTCTCTA,+,0.00) 356(CCCTCTCACCAC,+,0.00) 182(GTCTGACG,-,0.00) 421(GGCGCGGT,-,0.00) 29(CGCCGGCGCCGC,-,0.00) -126(CCCTGCTCCGCG,-,0.00),13(CGCGCCTCAGCG,-,0.00),38(CGCGGCTCCGTC,-,0.00) 45(CCGTCAGGCCGC,-,0.00) 561_WT_peak_7308 chr9 77642953 77643204 + 103 NA exon (NM_152420, exon 1 of 8) exon (NM_152420, exon 1 of 8) 232 NM_152420 138199 Hs.567688 NM_152420 HPRD:12958 C9orf41 - chromosome 9 open reading frame 41 protein-coding 0.147410 0.750000 -135(TCCTCCTCCTCC,+,0.00),5(GGAGGTGGGCGG,-,0.00),15(GGCGGAGGGCGA,-,0.00) -82(CGCGGCCGAG,+,0.00),12(GGCGGCGGAG,+,0.00) -142(AAGCCTCT,+,0.00) -131(CCTCCTCCTCGG,+,0.00),-24(CCTCCTCCCCCG,+,0.00),2(CCGGGAGGTGGG,-,0.00) 23(GCGACGCC,+,0.00),40(TCGCCGCC,+,0.00) -66(CGCCCGGC,-,0.00) 30(CGTCGCTG,+,0.00) -18(CCCCCGCAGCCC,+,0.00) -91(CGAAACCG,+,0.00) 10(TGGGCGGC,-,0.00) -35(CGCTGCCACCGC,-,0.00) 42(GCCGCCGCGGCC,+,0.00) -18(CCCCCGCAGC,-,0.00),37(GCATCGCCGC,-,0.00) 55(TCGGCCTGGCTC,+,0.00) 561_WT_peak_4977 chr22 50968586 50969118 + 103 NA promoter-TSS (NM_001257989) promoter-TSS (NM_001257989) -338 NM_001257989 1890 Hs.180903 NM_001953 HPRD:08833 TYMP ECGF|ECGF1|MEDPS1|MNGIE|MTDPS1|PDECGF|TP|hPD-ECGF thymidine phosphorylase protein-coding 0.120301 0.739212 230(GCTTCCGGTGCT,-,0.00),244(GGGCCCGGAGAC,+,0.00),270(GGGGCCGGCATC,+,0.00) -44(CGGACGCG,-,0.00) -63(TCGGTGGG,-,0.00) -141(GGCGGGGG,+,0.00),-116(CGCCCGGC,-,0.00),222(GCCGCGGG,+,0.00) -12(GCCCGACG,-,0.00),170(CGTCGGTC,+,0.00) -4(CTCGGGCCCCGC,-,0.00),182(GCGGGGCCAGGT,+,0.00),242(GCGGGCCCGGAG,+,0.00),268(GCGGGGCCGGCA,+,0.00) -40(CGCGGCGCAGCG,+,0.00),-40(CGCGGCGCAGCG,-,0.00) 138(GGGCCGCTCC,+,0.00) 167(CCGCGTCG,-,0.00) -39(GCGGCGCAGC,+,0.00),-39(GCGGCGCAGC,-,0.00),222(GCCGCGGGGC,+,0.00) 561_WT_peak_5887 chr5 118644525 118645004 + 103 NA intron (NM_001077654, intron 1 of 1) intron (NM_001077654, intron 1 of 1) -24106 NM_001286814 25816 Hs.618488 NM_014350 TNFAIP8 GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2 tumor necrosis factor, alpha-induced protein 8 protein-coding 0.002088 0.395833 165(AAGCCTCT,+,0.00),303(AGACACTT,-,0.00) -26(CTGGTAAA,+,0.00) 561_WT_peak_1518 chr11 124670025 124670438 + 103 NA promoter-TSS (NM_001301087) promoter-TSS (NM_001301087) 68 NM_001301087 79684 Hs.146079 NM_024631 HPRD:08024 MSANTD2 C11orf61 Myb/SANT-like DNA-binding domain containing 2 protein-coding 0.121065 0.736715 149(GTCTCCGGGGCT,-,0.00),192(GGCTCCGGGTCT,-,0.00) 216(ATGTGGCT,+,0.00) -43(GGCGTGGA,-,0.00) -122(CAGCCCCAGCCC,+,0.00) -71(GCCCGGCCCG,+,0.00) 224(GCCGGGCG,+,0.00) -68(CGGCCCGA,-,0.00) -12(CGTCGCTC,+,0.00),43(TAGCGGCG,-,0.00) -33(GGTCGGAC,+,0.00) 13(CGGGGAAA,+,0.00) 128(CCCGCGCA,+,0.00) -95(CGCTGCCCCCGA,-,0.00) -143(CGAGGCGG,+,0.00) -128(GCCCCCCAGC,-,0.00) 166(CGGGCCTGGCTC,+,0.00) 561_WT_peak_7486 chr9 139980727 139981059 + 103 NA promoter-TSS (NR_045720) promoter-TSS (NR_045720) 376 NR_027447 100289341 Hs.593896 NR_027447 MAN1B1-AS1 - MAN1B1 antisense RNA 1 (head to head) ncRNA 0.120482 0.771772 -145(TCGGCGCC,+,0.00) 53(GGGCACCAGCCC,+,0.00) -149(TCGCTCGG,-,0.00) -49(CGCCCGGC,-,0.00),-9(CCCCCGGC,-,0.00),102(GCCGCGGG,+,0.00) 26(TCTTGCCG,+,0.00) -122(CTCGGGCCCCGG,-,0.00) -154(CCGCCTCG,-,0.00) 147(CAACATGGCGGC,-,0.00) -98(GCGGCGCAGC,+,0.00),-98(GCGGCGCAGC,-,0.00) 42(GCGGCCAGGGTG,+,0.00) 561_WT_peak_6351 chr6 53213355 53213771 + 103 NA intron (NM_001242830, intron 1 of 6) CpG 414 NM_021814 60481 Hs.520189 NM_021814 HPRD:13268 ELOVL5 HELO1|SCA38|dJ483K16.1 ELOVL fatty acid elongase 5 protein-coding 0.132212 0.724221 143(GGCGGCGGAG,+,0.00) 52(GAGCGGCGGCCC,+,0.00) -63(GCCGCGGG,+,0.00) -24(CGGCACCA,-,0.00) -115(TTTCCCCG,-,0.00) -84(CCGGAGCCGGCG,+,0.00),138(GCGGCGGCGGCG,+,0.00) -103(CGAGGAGCCGGG,+,0.00) 16(GCTTCCCGGC,-,0.00) 131(CAGCAAGGCGGC,-,0.00) 561_WT_peak_6882 chr7 148581894 148582118 + 103 NA promoter-TSS (NM_004456) promoter-TSS (NM_004456) -565 NM_001203248 2146 Hs.444082 NM_004456 HPRD:03342 EZH2 ENX-1|ENX1|EZH1|EZH2b|KMT6|KMT6A|WVS|WVS2 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding 0.142857 0.706667 -94(CCGGGGAGGGGA,-,0.00) -123(AGGCCCGGGC,-,0.00),-25(GCCCGGCCCG,+,0.00) -26(CGCCCGGC,-,0.00) -7(CGCCGGAC,+,0.00) -164(CGGTTTTA,-,0.00) -160(TTTAACCG,-,0.00),-143(TTTCCCCG,-,0.00) -79(CGCGGGCCCCGG,-,0.00),-30(CGCTCGCCCGGC,-,0.00),-26(CGCCCGGCCCGC,-,0.00) -133(CGCGGAGCCGAG,+,0.00) -50(GCGCCGCGTT,+,0.00) -119(CCGGGCTGGCCG,+,0.00) 561_WT_peak_5688 chr5 35811220 35811635 + 103 NA intron (NM_024867, intron 36 of 36) intron (NM_024867, intron 36 of 36) -45550 NM_002185 3575 Hs.591742 NM_002185 HPRD:00893 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding 0.002410 0.346154 561_WT_peak_6262 chr6 30457175 30457721 + 103 NA intron (NM_005516, intron 1 of 7).5 CpG 265 NM_005516 3133 Hs.650174 NM_005516 HPRD:00877 HLA-E EA1.2|EA2.1|HLA-6.2|MHC|QA1 major histocompatibility complex, class I, E protein-coding 0.087912 0.645338 120(CCGGGAGGAGGG,-,0.00) 275(ACGACGCC,+,0.00) 199(TCCCGGCCCG,+,0.00) 91(GGCGGGGG,+,0.00),209(GCCGCGGG,+,0.00),300(GCCGCGGG,+,0.00) -99(CGCCACGA,-,0.00),132(TCGGGCCG,+,0.00),296(TGGTGCCG,+,0.00) -102(CGTCGCCA,+,0.00) 138(CGATCTCAGCCC,+,0.00) 287(GTCCGAGG,-,0.00) 114(GCCGCGCC,+,0.00) 82(GGCCGGCCCGGC,-,0.00),83(GCCGGCCCGGCG,+,0.00) 108(CGGGGAGCCGCG,+,0.00),213(CGGGGAGCCCCG,+,0.00) 134(GGGCCGATCT,+,0.00) 84(CCGGCCCGGCGG,+,0.00),201(CCGGCCCGGCCG,+,0.00),202(CGGCCCGGCCGC,-,0.00) 561_WT_peak_356 chr1 109505637 109505993 + 103 NA intron (NM_015127, intron 1 of 11) CpG 306 NM_001048210 23155 Hs.658489 NM_015127 HPRD:17471 CLCC1 MCLC chloride channel CLIC-like 1 protein-coding 0.120787 0.689076 -76(AGGCCGCT,+,0.00) -50(CCCGGAACGCGC,-,0.00) -31(CGGCGGAC,+,0.00) 131(CGGGTAAC,+,0.00) 106(CGCTGGACCCGC,-,0.00) -41(CGCGCAACCGCG,+,0.00) 113(CCCGCCAGGGCG,+,0.00) 561_WT_peak_3250 chr17 49337802 49338262 + 103 NA promoter-TSS (NM_017643) promoter-TSS (NM_017643) 135 NM_016001 51096 Hs.709327 NM_016001 ENSG00000011260 UTP18 CGI-48|WDR50 UTP18 small subunit (SSU) processome component homolog (yeast) protein-coding 0.130435 0.704989 -123(CCTTCCGGCCCC,-,0.00) 171(GGCGGCGGAG,+,0.00) 127(CCGCCGGCCCGG,+,0.00) 271(GACGTCGA,-,0.00) 135(CCGGCCGA,+,0.00) -135(GCTGCGCA,+,0.00),-70(TGCGCAGC,-,0.00) 76(GCGGGGCCAGGC,+,0.00),128(CGCCGGCCCGGC,-,0.00) -84(GGGGCCTGGGCG,+,0.00),78(GGGGCCAGGCGG,+,0.00),83(CAGGCGGGCCTC,-,0.00),130(CCGGCCCGGCCG,+,0.00) 561_WT_peak_949 chr10 35415803 35416199 + 103 NA promoter-TSS (NM_183060) promoter-TSS (NM_183060) 232 NR_051975 1390 Hs.200250 NM_001881 HPRD:00444 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding 0.131313 0.725441 -110(CCCGGGAGGCCG,-,0.00) 105(CGCGTCCG,+,0.00) -56(TCGGTCGG,-,0.00),77(GCGGTCGG,-,0.00) 152(CGGGTAAG,+,0.00) 52(TGGGCGGC,-,0.00) 56(CGGCGGCGCCGC,-,0.00) -150(GGGCGGAGTT,+,0.00) 197(CGACGCGG,+,0.00) 55(GCGGCGGCGC,+,0.00),66(GCTGCTGAGC,+,0.00) -19(CAGGGAGGCCGC,-,0.00) 561_WT_peak_1321 chr11 62554136 62554763 + 103 NA promoter-TSS (NM_199337) promoter-TSS (NM_199337) -425 NM_199337 374395 Hs.381134 NM_199337 HPRD:14186 TMEM179B - transmembrane protein 179B protein-coding 0.133971 0.737261 30(AGCCCCGGACTC,+,0.00) -4(CGCGGCCGCC,-,0.00) 247(AGCCGTTT,-,0.00) -151(CCGGCCTCCCGC,+,0.00),338(CTGCCTTCCCCG,+,0.00) -70(TCTACGCC,+,0.00),91(GGCGACGA,-,0.00) 23(CGGCGGCAGCCC,+,0.00) 353(CGTACGGG,-,0.00) 292(GCCGGGCG,+,0.00),317(GCCGCGGG,+,0.00) 46(CGGAAGATGCCG,+,0.00) 131(CGTCGGCC,+,0.00) -125(GCGGGGCCGGAG,+,0.00),138(CTCTGGGCCCGC,-,0.00) -12(CACGGCTCCGCG,-,0.00),121(GGCGGCCCCGCG,-,0.00),262(CGCGGCGCCCCG,+,0.00),262(CGCGGCGCCCCG,-,0.00) 128(CCGCGTCG,-,0.00),228(CCGCGACG,-,0.00) -138(GCCGCCAGGGGG,+,0.00) -8(GCTCCGCGGC,-,0.00),304(GCTGGGAGGC,+,0.00) 561_WT_peak_1781 chr12 80328548 80328879 + 103 NA promoter-TSS (NM_001244992) promoter-TSS (NM_001244992) 18 NM_001244992 4659 Hs.49582 NM_002480 HPRD:03606 PPP1R12A M130|MBS|MYPT1 protein phosphatase 1, regulatory subunit 12A protein-coding 0.090634 0.641566 10(GCCGCCGGGTCT,-,0.00) -18(CGCGTCCG,+,0.00) 112(AGGGCTGGGA,-,0.00) -35(TCGTTCCG,+,0.00),6(TCCTGCCG,+,0.00) 47(AGGCGGAGAGGG,-,0.00),56(GGGAAGAGAGGG,-,0.00) -118(CGTCGAAC,+,0.00) -66(CGTCTCGG,+,0.00) 561_WT_peak_6443 chr6 112607296 112607676 + 103 NA intron (NR_121193, intron 2 of 2) intron (NR_121193, intron 2 of 2) -31569 NM_001105209 3910 Hs.654572 NM_002290 HPRD:02532 LAMA4 CMD1JJ|LAMA3|LAMA4*-1 laminin, alpha 4 protein-coding 0.005263 0.404199 -74(CAAAACCT,+,0.00) 561_WT_peak_897 chr10 17065504 17065978 + 103 NA intron (NM_001081, intron 27 of 66) intron (NM_001081, intron 27 of 66) 106075 NM_001081 8029 Hs.166206 NM_001081 HPRD:04296 CUBN IFCR|MGA1|gp280 cubilin (intrinsic factor-cobalamin receptor) protein-coding 0.010549 0.360000 230(CAAAACCT,+,0.00) 561_WT_peak_6887 chr7 148762871 148763182 + 103 NA Intergenic CpG 24843 NM_152411 136051 Hs.729572 NM_152411 HPRD:13232 ZNF786 - zinc finger protein 786 protein-coding 0.080386 0.673077 -107(CAGCCCCAGCCC,+,0.00) -131(CCCGTACG,+,0.00),-129(CGTACGCG,-,0.00) -73(TCGCTCGG,-,0.00) 49(CCCGCGGC,-,0.00) -124(GCGGGGCCTGCG,+,0.00) 561_WT_peak_506 chr1 150206947 150207609 + 103 NA promoter-TSS (NM_001136479) promoter-TSS (NM_001136479) -252 NM_001136479 81611 Hs.656466 NM_030920 HPRD:16493 ANP32E LANP-L|LANPL acidic (leucine-rich) nuclear phosphoprotein 32 family, member E protein-coding 0.113293 0.650075 277(AAGCGGAT,+,0.00) 403(GCGGCTTCCCGG,+,0.00) -93(CCGACTGA,+,0.00),342(GCGGTCGG,-,0.00) 266(GGCGGGGG,+,0.00),375(GCCGGGCG,+,0.00) 271(GGGAAGAAGCGG,+,0.00) 476(CGTCGCGA,+,0.00),478(TCGCGACG,-,0.00) 93(CCCTCCCAACCC,+,0.00) 484(CGTCGGAC,+,0.00),485(GTCGGACG,-,0.00) 442(TGCGCGGA,-,0.00) 394(GCGGCGCGCGCG,+,0.00) -139(CGAGGCTCCCCG,-,0.00),402(CGCGGCTTCCCG,-,0.00) 10(CCGAGAAG,-,0.00) 561_WT_peak_4982 chr3 3221144 3221389 + 103 NA intron (NM_016302, intron 1 of 10) CpG 135 NM_016302 51185 Hs.18925 NM_016302 HPRD:16750 CRBN MRT2|MRT2A cereblon protein-coding 0.089796 0.695122 -60(TAGCGGCT,+,0.00) -118(GGGCTGGCTCGC,-,0.00) -154(GGCCGACG,-,0.00) 69(TTTACCCG,-,0.00) 29(TGCGCAGC,-,0.00) -80(CCCAGGCCCAGC,-,0.00) -59(AGCGGCTCCGAG,-,0.00) -129(GCGGCCCTGCTG,+,0.00) 561_WT_peak_6209 chr6 27706333 27706601 + 103 NA Intergenic AluSx|SINE|Alu -23056 NR_038929 100131289 Hs.200573 NR_038929 LOC100131289 - uncharacterized LOC100131289 ncRNA 0.044776 0.509294 75(TAGAGACG,-,0.00) 561_WT_peak_5757 chr5 55308397 55308737 + 103 NA Intergenic MIR|SINE|MIR 17572 NR_102755 441072 Hs.482141 NR_102755 ENSG00000227908 FLJ31104 - uncharacterized LOC441072 ncRNA 0.005882 0.407625 561_WT_peak_1431 chr11 82782942 82783521 + 103 NA promoter-TSS (NM_001286061) promoter-TSS (NM_001286061) 123 NR_038903 100506233 Hs.503429 NR_038903 ENSG00000246067 RAB30-AS1 - RAB30 antisense RNA 1 (head to head) ncRNA 0.050086 0.565517 23(CTCGGCCGCC,-,0.00) 219(AGCGGCAT,-,0.00) 146(GCCGCGGG,+,0.00) 151(GGGCACGA,-,0.00) 57(CGCGGAGCCGGG,+,0.00) 561_WT_peak_3606 chr19 8578730 8579096 + 103 NA intron (NM_032370, intron 1 of 5) CpG 135 NM_032370 84330 Hs.515114 NM_032370 HPRD:17511 ZNF414 ZFP414 zinc finger protein 414 protein-coding 0.128415 0.741144 -132(CATTCCGGGCCG,-,0.00),-121(GGGCCCGGAAGT,+,0.00) 10(CCGCGACCCCGG,+,0.00) -52(TCGGCCGG,-,0.00) -127(CGGGCCGGGC,-,0.00) 144(ACCTCTCAGCTC,+,0.00) -84(CGGCGGAC,+,0.00) 52(GCCTCTTGTTTC,-,0.00) 3(GCCGCGCC,+,0.00) -58(GCGGGGTCGGCC,+,0.00),170(GCGGGGCCTGCG,+,0.00) -6(CGCAGCTCCGCC,-,0.00),17(CCCGGTGCCGCG,+,0.00) -162(GGGCGGAGTC,+,0.00),-60(GGGCGGGGTC,+,0.00),-27(GGGCCGCTCC,+,0.00) -2(GCTCCGCCGC,-,0.00) 561_WT_peak_3690 chr19 19700457 19700882 + 103 NA intron (NR_038198, intron 2 of 7) intron (NR_038198, intron 2 of 7) 29056 NM_025245 80714 Hs.466257 NM_025245 HPRD:16287 PBX4 - pre-B-cell leukemia homeobox 4 protein-coding 0.021176 0.495305 561_WT_peak_5079 chr3 44552351 44552516 + 103 NA promoter-TSS (NM_001287349) promoter-TSS (NM_001287349) -301 NM_001287349 285346 Hs.648974 NM_001287349 ZNF852 - zinc finger protein 852 protein-coding 0.054545 0.578313 -110(AGGCCTCT,+,0.00),-53(AGCGGCCT,-,0.00) -50(GGCCTGGCGCGG,-,0.00) -132(CGGTTCTG,-,0.00) -45(GGCGCGGT,-,0.00) -52(GCGGCCTGGCGC,+,0.00) 561_WT_peak_947 chr10 33428034 33428073 + 103 NA Intergenic Intergenic -180760 NM_002211 3688 Hs.643813 NM_002211 HPRD:00628 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) protein-coding 0.000000 0.300000 561_WT_peak_3618 chr19 10613060 10613743 + 103 NA promoter-TSS (NM_012289) promoter-TSS (NM_012289) 80 NM_012289 9817 Hs.465870 NM_012289 HPRD:12079 KEAP1 INrf2|KLHL19 kelch-like ECH-associated protein 1 protein-coding 0.125915 0.750000 -49(GCTCCCGGGCCA,-,0.00),76(GTCTCCGGGCAC,-,0.00) -152(CTCGGCTGCC,-,0.00) -117(TCAACGCC,+,0.00) 261(GGGCGCCCGCCG,+,0.00) -65(TCGCTCGG,-,0.00),181(CCGCCCGA,+,0.00) 258(GCCGGGCG,+,0.00),338(CCCCCGCC,-,0.00),400(GGCGGGGG,+,0.00) -79(GCCTCCTGGTTC,-,0.00) -87(TGCGCAGC,-,0.00),366(TGCGCGGC,-,0.00) 164(CTCCGGCTCCGC,-,0.00),224(GCGGAGCGCGCG,+,0.00),396(GCGGGGCGGGGG,+,0.00) 424(CGCTTAGCCGCG,+,0.00) 325(GGGCCGCTCC,+,0.00) 440(CCGAGTCG,-,0.00) 45(GGCGCCCTGGGC,+,0.00),54(GGCCGTGGCGCC,-,0.00),149(CCCGCCATGGCC,+,0.00),151(CGCCATGGCCGC,-,0.00),386(CAGCATGGCGGC,-,0.00) 364(GCTGCGCGGC,+,0.00),393(GCGGCGGGGC,+,0.00) -5(CACCCAGGTCGC,-,0.00) 561_WT_peak_25 chr1 2477849 2478054 + 103 NA Intergenic CpG -9853 NM_001297605 8764 Hs.512898 NM_003820 HPRD:04122 TNFRSF14 ATAR|CD270|HVEA|HVEM|LIGHTR|TR2 tumor necrosis factor receptor superfamily, member 14 protein-coding 0.097561 0.723301 -162(CCGCCCTCCGCC,+,0.00) -7(CGGTGCCAGCCC,+,0.00) -12(TCGTGCGG,+,0.00) -79(GCGGGGCCAGGC,+,0.00),-8(GCGGTGCCAGCC,+,0.00) -112(CGTGGCGG,+,0.00),-21(CCGAGAAG,-,0.00) 561_WT_peak_904 chr10 18940296 18940649 + 103 NA promoter-TSS (NM_182543) promoter-TSS (NM_182543) 94 NM_182543 221078 Hs.396175 NM_182543 HPRD:14843 NSUN6 4933414E04Rik|ARL5B-AS1|NOPD1 NOP2/Sun domain family, member 6 protein-coding 0.062323 0.531073 141(CTTTCCGGTCCC,-,0.00) -154(AGCCGATT,-,0.00),92(AAGTCGCT,+,0.00),93(AGTCGCTT,-,0.00) 115(GTCCGGCG,-,0.00) 117(CCGGCGCCTGCG,+,0.00) 561_WT_peak_5046 chr3 30686228 30686421 + 103 NA exon (NM_003242, exon 2 of 7) exon (NM_003242, exon 2 of 7) 38330 NM_003242 7048 Hs.82028 NM_003242 HPRD:01823 TGFBR2 AAT3|FAA3|LDS1B|LDS2|LDS2B|MFS2|RIIC|TAAD2|TGFR-2|TGFbeta-RII transforming growth factor, beta receptor II (70/80kDa) protein-coding 0.010363 0.448454 561_WT_peak_565 chr1 156710833 156711316 + 103 NA promoter-TSS (NM_024540) promoter-TSS (NM_024540) -151 NM_024540 79590 Hs.418233 NM_024540 HPRD:14749 MRPL24 L24mt|MRP-L18|MRP-L24 mitochondrial ribosomal protein L24 protein-coding 0.053830 0.572314 144(AGGCCGCT,+,0.00) 102(CGGCTGGCCCGC,-,0.00) -98(CCCCCGCC,-,0.00),31(GGCGGGGG,+,0.00) 1(CGCCGCTA,+,0.00) -2(GTCCGCCG,-,0.00) 17(GAAACAGGAAGT,+,0.00),201(GCTTCCTGTTCA,-,0.00) 124(CCCGCGCA,+,0.00) -95(CCGCCACG,-,0.00) -96(CCCGCCACGCCC,+,0.00) 561_WT_peak_1720 chr12 56109899 56110167 + 103 NA promoter-TSS (NR_037656) promoter-TSS (NR_037656) -43 NR_037657 2647 Hs.94672 NM_001487 HPRD:03263 BLOC1S1 BLOS1|GCN5L1|MICoA|RT14 biogenesis of lysosomal organelles complex-1, subunit 1 protein-coding 0.055970 0.579926 58(AGAGGCTT,-,0.00) -156(GCCCGACG,-,0.00) -44(GCGGCCTAGCTT,+,0.00) 561_WT_peak_1975 chr13 30424559 30424857 + 103 NA 5' UTR (NM_007106, exon 1 of 5) 5' UTR (NM_007106, exon 1 of 5) 112 NM_007106 5412 Hs.145575 NM_007106 HPRD:05275 UBL3 HCG-1|PNSC1 ubiquitin-like 3 protein-coding 0.100671 0.675585 -78(TCCTCCTCCTCC,+,0.00) -44(CGCGGCCGCC,-,0.00) -141(CGGAAGAGGCCG,+,0.00) 0(GCGGCGGCGGCG,+,0.00),3(GCGGCGGCGGCG,+,0.00) -13(CAACATGGCGGC,-,0.00) 59(CCCTCGCAGC,-,0.00) 561_WT_peak_6075 chr6 2543179 2543363 + 103 NA Intergenic MER72|LTR|ERV1 92027 NM_152554 154386 Hs.680574 NM_152554 C6orf195 bA145H9.2 chromosome 6 open reading frame 195 protein-coding 0.005435 0.454054 561_WT_peak_712 chr1 207999185 207999524 + 103 NA Intergenic Intergenic 7630 NR_026817 148696 Hs.125511 NM_001039568 LOC148696 - uncharacterized LOC148696 ncRNA 0.032448 0.508824 100(CGGCATGA,-,0.00) -101(ACTGCCATGGCG,+,0.00) 561_WT_peak_3750 chr19 38397671 38397931 + 103 NA promoter-TSS (NM_031951) promoter-TSS (NM_031951) -60 NM_015073 23094 Hs.655502 NM_015073 HPRD:18755 SIPA1L3 SPAL3 signal-induced proliferation-associated 1 like 3 protein-coding 0.107692 0.678161 37(AAGCGGCT,+,0.00),38(AGCGGCTT,-,0.00) -56(CGCCTACG,+,0.00) -108(CTGCACGA,-,0.00) -54(CCTACGGCTCCC,-,0.00) 561_WT_peak_2361 chr14 100535058 100535344 + 103 NA intron (NM_016337, intron 1 of 13) intron (NM_016337, intron 1 of 13) 3450 NM_016337 51466 Hs.125867 NM_016337 HPRD:10942 EVL RNB6 Enah/Vasp-like protein-coding 0.024476 0.526132 561_WT_peak_3960 chr2 9922548 9922734 + 103 NA Intergenic Intergenic -60930 NM_005680 9014 Hs.584833 NM_005680 HPRD:05363 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa protein-coding 0.016129 0.502674 15(CGGCACCA,-,0.00) 561_WT_peak_3187 chr17 41150266 41150668 + 103 NA promoter-TSS (NM_000988) promoter-TSS (NM_000988) 21 NM_000988 6155 Hs.514196 NM_000988 HPRD:09602 RPL27 L27 ribosomal protein L27 protein-coding 0.069652 0.588089 158(TGGCGGCT,+,0.00) 110(GGGGTCGA,-,0.00) 198(TCGGGCGG,-,0.00) -100(GAGCTTCTTCCG,-,0.00) 109(GGGGGTCGAAGG,+,0.00) -123(GCCGCGCC,+,0.00) 124(GGGCGGCGCC,+,0.00) 561_WT_peak_6107 chr6 14117916 14118175 + 103 NA exon (NM_004233, exon 1 of 5) exon (NM_004233, exon 1 of 5) 180 NM_004233 9308 Hs.595133 NM_004233 HPRD:05170 CD83 BL11|HB15 CD83 molecule protein-coding 0.138996 0.730769 29(TCGCCCCCCGCC,+,0.00) -141(GGGCTGGCGCGC,-,0.00) -118(CGAACGCG,-,0.00) 62(TCGGTCGC,-,0.00) 33(CCCCCGCC,-,0.00) 60(CGTCGGTC,+,0.00) -93(CCGGCGCCCGCG,+,0.00) -74(GCTCTGCAGC,-,0.00),-56(GCGGCGCAGC,+,0.00),-56(GCGGCGCAGC,-,0.00) 561_WT_peak_2428 chr15 38945251 38945545 + 103 NA Intergenic Intergenic -43401 NM_207444 400359 Hs.448785 NM_207444 HPRD:13418 C15orf53 - chromosome 15 open reading frame 53 protein-coding 0.017007 0.481356 -152(AGCCACCT,-,0.00) -117(CAAAACCC,+,0.00),-74(GGGTTTTG,-,0.00) -140(GCAGCCTGGCTT,+,0.00) 561_WT_peak_4881 chr22 30838481 30838679 + 103 NA Intergenic MER41B|LTR|ERV1 16969 NM_001003704 51537 Hs.713636 NM_016498 HPRD:17612 MTFP1 MTP18 mitochondrial fission process 1 protein-coding 0.015152 0.407035 -5(CGGTTTTG,-,0.00) 561_WT_peak_4581 chr20 23342218 23342578 + 102 NA Intergenic CpG -2623 NM_022482 64412 Hs.709462 NM_022482 HPRD:15778 GZF1 ZBTB23|ZNF336 GDNF-inducible zinc finger protein 1 protein-coding 0.111111 0.700831 53(GGGCCCGGAAGC,+,0.00) 163(GCGTGCCG,+,0.00) 180(CGTCGCTG,+,0.00) -152(GCCGCGCC,+,0.00) 142(GACTGGCCCCGC,-,0.00) -148(CGCCGAGCCCCG,+,0.00) 561_WT_peak_7245 chr9 34178988 34179253 + 102 NA non-coding (NR_033243, exon 1 of 8) non-coding (NR_033243, exon 1 of 8) 117 NR_033243 51271 Hs.268963 NM_016525 HPRD:15597 UBAP1 NAG20|UAP|UBAP|UBAP-1 ubiquitin associated protein 1 protein-coding 0.086792 0.695489 -92(TGGCGGCT,+,0.00),75(AGCGGCAT,-,0.00) 68(CGGCAGCAGCGG,+,0.00) -132(GGGCGGTGAGGG,-,0.00) -153(CGTCAGAC,+,0.00),-152(GTCAGACG,-,0.00) -43(GGGCAGAGTT,+,0.00) -163(GGCGCCATGACG,+,0.00),-97(CAACATGGCGGC,-,0.00) 561_WT_peak_4677 chr20 48808717 48808986 + 102 NA promoter-TSS (NR_125739) promoter-TSS (NR_125739) -245 NR_125739 101927559 Hs.442486 NR_125739 CEBPB-AS1 - CEBPB antisense RNA 1 ncRNA 0.070632 0.496296 35(CGGGCCGGTTTC,+,0.00) -2(CTGCTTCTCCCT,-,0.00) -139(CGTCGGTA,+,0.00) 40(CGGTTTCG,-,0.00) 36(GGGCCGGTTT,+,0.00) 561_WT_peak_7444 chr9 131709666 131709868 + 102 NA promoter-TSS (NM_015354) promoter-TSS (NM_015354) -205 NM_015354 23511 Hs.308340 NM_015354 HPRD:18582 NUP188 KIAA0169|hNup188 nucleoporin 188kDa protein-coding 0.069307 0.674877 -37(GGCGTAGA,-,0.00) -76(GAGCTGGCGCCC,-,0.00) -69(CGCCCGGC,-,0.00) -29(CGTCGCCA,+,0.00) -156(TTCACCCG,-,0.00) -85(GCGGCCTGGGAG,+,0.00) 561_WT_peak_6088 chr6 5004031 5004580 + 102 NA promoter-TSS (NM_006638) promoter-TSS (NM_006638) -8 NM_001286132 10799 Hs.511756 NM_006638 HPRD:09361 RPP40 RNASEP1|bA428J1.3 ribonuclease P/MRP 40kDa subunit protein-coding 0.081967 0.649091 -113(CGGCCCGAAAAG,+,0.00) 292(TCAACGCC,+,0.00) -132(CGCACGCG,-,0.00) -113(CGGCCCGA,-,0.00) 93(CCCCTTCCTCCC,-,0.00),108(CCGCCCCTTCCC,-,0.00) 82(GGCACGCCCCGC,-,0.00),100(CTCCCGCCCCGC,-,0.00),307(CTCCGTCCCCGC,-,0.00) 356(CCGCCTCG,-,0.00) 145(GCCCCTGGCGGC,-,0.00),165(GGGGATGGCGGC,-,0.00) 561_WT_peak_4054 chr2 44396391 44396773 + 102 NA intron (NM_177969, intron 1 of 4) CpG 582 NM_001033556 5495 Hs.416769 NM_002706 HPRD:04796 PPM1B PP2C-beta|PP2C-beta-X|PP2CB|PP2CBETA|PPC2BETAX protein phosphatase, Mg2+/Mn2+ dependent, 1B protein-coding 0.086387 0.686684 58(CCCGGCCGCC,-,0.00) -111(AAGCGGCT,+,0.00) 30(GGCCTGGCTCTC,-,0.00) -134(CGCCCGGC,-,0.00) 41(CGGGTATA,+,0.00) -98(GCCGCGCC,+,0.00) -53(TGCCGAGCCGCG,+,0.00),4(CGCGGAGCCTAG,+,0.00) -93(GCCGCCGAGGCC,+,0.00) -55(GCTGCCGAGC,+,0.00),2(GCCGCGGAGC,+,0.00) -54(CTGCCGAGCCGC,-,0.00),28(CGGGCCTGGCTC,+,0.00) 561_WT_peak_4760 chr21 30396714 30397196 + 102 NA promoter-TSS (NM_001001992) promoter-TSS (NM_001001992) 17 NM_006447 10600 Hs.99819 NM_006447 HPRD:06881 USP16 UBP-M|UBPM ubiquitin specific peptidase 16 protein-coding 0.058091 0.573499 61(AGCCACTT,-,0.00) 30(CCGGGAGGTGGG,-,0.00) 116(GGCTTCGA,-,0.00),120(TCGACTCC,+,0.00) 127(CGTCGCTC,+,0.00),249(CGTCGCTC,+,0.00) 561_WT_peak_5036 chr3 20145828 20146096 + 102 NA intron (NM_003884, intron 5 of 17) intron (NM_003884, intron 5 of 17) 64438 NM_003884 8850 Hs.533055 NM_003884 HPRD:06780 KAT2B CAF|P/CAF|PCAF K(lysine) acetyltransferase 2B protein-coding 0.011194 0.442379 561_WT_peak_2311 chr14 81408116 81408318 + 102 NA Intergenic Intergenic -2333 NM_152446 145508 Hs.162889 NM_152446 HPRD:09834 CEP128 C14orf145|C14orf61|LEDP/132 centrosomal protein 128kDa protein-coding 0.044554 0.522167 -44(CGGGTAAC,+,0.00),-31(CGGATAAA,+,0.00) -9(GCCGCGCC,+,0.00) 561_WT_peak_5599 chr4 140216662 140217046 + 102 NA intron (NM_001184989, intron 3 of 5) CpG 5510 NM_001184991 4717 Hs.84549 NM_002494 HPRD:11959 NDUFC1 KFYI NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa protein-coding 0.080729 0.680519 -38(GAACCCGGGCCG,-,0.00) 91(CCGGGAAAGGGG,-,0.00) 76(GGCGGGGG,+,0.00) 39(CTGCACGA,-,0.00) -5(GGCTGGGTCCGC,-,0.00) 30(CGAGTCGG,+,0.00) 206(GCTCTGCAGC,-,0.00) 561_WT_peak_1950 chr13 22685638 22685838 + 102 NA Intergenic LTR54B|LTR|ERV1 -98686 NR_103810 100506622 Hs.255773 NR_103810 LINC00540 - long intergenic non-protein coding RNA 540 ncRNA 0.015000 0.447761 561_WT_peak_2736 chr16 22448243 22448552 + 102 NA promoter-TSS (NR_027154) promoter-TSS (NR_027154) 68 NR_027154 641298 Hs.552700 NM_199284 ENSG00000237296 SMG1P1 - SMG1 pseudogene 1 pseudo 0.129450 0.732258 109(CCCGCCTCCTCG,+,0.00) -52(GCCGGGAGGCGG,-,0.00),-51(CCGGGAGGCGGG,-,0.00) 47(CGCGCACG,+,0.00) -74(TAGCGGCG,-,0.00) -67(GGCGCGGC,-,0.00),45(GCCGCGCA,+,0.00),98(ACCGCGCC,+,0.00) -125(CCCAGGCCCGGC,-,0.00),-111(GGCCGACCCCGC,-,0.00),-66(GCGCGGCCAGCG,+,0.00),27(GCGGCCCCGGCG,+,0.00) -58(AGCGGAGCCGGG,+,0.00) -72(GCGGCGGCGC,+,0.00) 561_WT_peak_2646 chr16 1020739 1020936 + 102 NA exon (NM_022773, exon 1 of 11) exon (NM_022773, exon 1 of 11) 147 NR_033646 64788 Hs.71912 NM_022773 HPRD:07789 LMF1 C16orf26|HMFN1876|JFP11|TMEM112|TMEM112A lipase maturation factor 1 protein-coding 0.106599 0.712121 -14(GGCGGCGA,-,0.00) -129(CGCCCGGC,-,0.00) -163(TGCGCGGA,-,0.00) -35(GCGGGGCCACGC,+,0.00) 561_WT_peak_6926 chr8 8086174 8086425 + 102 NA non-coding (NR_024363, exon 1 of 6) non-coding (NR_024363, exon 1 of 6) 207 NR_024362 286042 Hs.656318 NR_024361 ENSG00000173295 FAM86B3P - family with sequence similarity 86, member A pseudogene pseudo 0.103586 0.738095 -160(AGCCGCTT,-,0.00) -37(CCCCCGGC,-,0.00) -114(TGGGCGGC,-,0.00) -108(GCGGGGCGAGCG,+,0.00),-87(GCGGGGCTCGCG,+,0.00) -111(GCGGCGGGGC,+,0.00) 561_WT_peak_2536 chr15 69745193 69745588 + 102 NA intron (NM_213725, intron 1 of 2) CpG 231 NM_001003 6176 Hs.356502 NM_001003 HPRD:01611 RPLP1 LP1|P1|RPP1 ribosomal protein, large, P1 protein-coding 0.108861 0.712121 22(GGCGGCCGGG,+,0.00) -97(CAGCGCCAGCCC,+,0.00),135(GGGCGGGCGCTC,-,0.00),151(GGGCTGGGGCCT,-,0.00) -106(CGCGTCCG,+,0.00) -24(CTGCACGA,-,0.00) 49(CTTTCGGCTCTC,-,0.00) 39(TGGGCGGT,-,0.00) 104(CCGGGGCCAGGC,+,0.00),198(GCGGGCCCAGCG,+,0.00) -39(TACTCGGCCC,-,0.00) -40(CTACTCGG,+,0.00) -75(CGCGCCATGGCC,+,0.00),-73(CGCCATGGCCTC,-,0.00) 15(GCGGGCCGGCGG,+,0.00),23(GCGGCCGGGCTG,+,0.00),27(CCGGGCTGCCTG,+,0.00),106(GGGGCCAGGCCG,+,0.00),107(GGGCCAGGCCGC,-,0.00) 561_WT_peak_4887 chr22 31886070 31886503 + 102 NA promoter-TSS (NM_001164501) promoter-TSS (NM_001164501) -412 NM_019843 56478 Hs.517559 NM_019843 HPRD:10456 EIF4ENIF1 4E-T|Clast4 eukaryotic translation initiation factor 4E nuclear import factor 1 protein-coding 0.094688 0.603687 -18(TGGCGGCT,+,0.00) -164(CGTGCGCG,-,0.00) 174(TCGGTCGT,-,0.00) -62(CGGCACGC,-,0.00) 125(CTGTTTTG,-,0.00) -150(GTCGCCGTGGGC,+,0.00) 561_WT_peak_7188 chr8 145158613 145158813 + 102 NA promoter-TSS (NM_032272) promoter-TSS (NM_032272) 425 NR_038270 81858 Hs.529755 NM_030974 HPRD:15463 SHARPIN SIPL1 SHANK-associated RH domain interactor protein-coding 0.160000 0.786070 12(GGCGCCGA,-,0.00) -52(CCGGTCGG,-,0.00) -74(TCGGGCCG,+,0.00) -162(GTCCGAGG,-,0.00),-3(CGTCGGGC,+,0.00) -153(CGCCGCCGCCGC,-,0.00),-135(CGCTGGCGGCGC,-,0.00) 561_WT_peak_6168 chr6 26313187 26313562 + 102 NA Intergenic tRNA-Met-i|tRNA|tRNA -27647 NM_003543 8365 Hs.591790 NM_003543 HPRD:11919 HIST1H4H H4/h|H4FH histone cluster 1, H4h protein-coding 0.042667 0.452128 561_WT_peak_2864 chr16 66556133 66556353 + 102 NA intron (NR_073520, intron 5 of 8) intron (NR_073520, intron 5 of 8) 27485 NM_001272050 7084 Hs.512619 NM_004614 HPRD:01770 TK2 MTDPS2|MTTK thymidine kinase 2, mitochondrial protein-coding 0.018182 0.574661 -89(GGAGGAGGCCCA,-,0.00) -93(CAGGGGAGGAGG,-,0.00) 13(TCCACGCC,+,0.00) 561_WT_peak_3799 chr19 45954266 45954880 + 102 NA Intergenic Intergenic -16680 NM_001114171 2354 Hs.590958 NM_006732 HPRD:01270 FOSB AP-1|G0S3|GOS3|GOSB FBJ murine osteosarcoma viral oncogene homolog B protein-coding 0.060261 0.630894 31(GCCCCCTCCTCC,+,0.00) -130(CCGGGAGCCCGG,-,0.00),35(CCTCCTCCCCGG,+,0.00) -118(GGCGGGGG,+,0.00) 276(TTTCCCCG,-,0.00) 328(GAGACAGGCAGC,+,0.00) -141(AGACCGGCCC,-,0.00) 561_WT_peak_4815 chr21 44313444 44313658 + 102 NA intron (NM_001001503, intron 1 of 2) CpG 173 NM_021075 4731 Hs.473937 NM_021075 NDUFV3 CI-10k|CI-9KD NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa protein-coding 0.088785 0.720930 -61(GGGGTGAGGGGG,-,0.00) -127(GGGCGCTGAAGG,+,0.00) -89(TGCGCGGC,-,0.00),-51(GGCGCGGT,-,0.00) -96(GGCTGGCTGCGC,-,0.00),6(CGCTGACCCCGC,-,0.00) -87(CGCGGCCCCGAG,-,0.00) 37(CCGCCACG,-,0.00) -91(GCTGCGCGGC,+,0.00) 561_WT_peak_6776 chr7 99942918 99943147 + 102 NA intron (NR_036569, intron 3 of 17) LTR13|LTR|ERVK -6909 NR_103728 101752334 Hs.521075 NR_103728 PVRIG2P - poliovirus receptor related immunoglobulin domain containing 2, pseudogene pseudo 0.021834 0.578261 561_WT_peak_4862 chr22 26824511 26824871 + 102 NA promoter-TSS (NM_020437) promoter-TSS (NM_020437) -589 NM_020437 57168 Hs.567547 NM_020437 HPRD:14255 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding 0.047222 0.592798 -17(CGCGCACG,+,0.00) -43(AGGGCAGGGC,-,0.00) -19(ACCGCGCA,+,0.00) -42(GGGCAGGGCGGG,-,0.00) -118(CCGTCCTGCCTG,+,0.00) 561_WT_peak_265 chr1 63988785 63989217 + 102 NA promoter-TSS (NM_032437) promoter-TSS (NM_032437) -12 NM_032437 84455 Hs.652324 NM_032437 HPRD:17226 EFCAB7 - EF-hand calcium binding domain 7 protein-coding 0.076389 0.570439 -14(GCCGGGCG,+,0.00) 6(CCGCGACG,-,0.00) -17(GCGGCCGGGCGG,+,0.00) 561_WT_peak_3869 chr19 50837191 50837434 + 102 NA promoter-TSS (NR_110912) promoter-TSS (NR_110912) -540 NR_110912 3748 Hs.467146 NM_004977 HPRD:08886 KCNC3 KSHIIID|KV3.3|SCA13 potassium voltage-gated channel, Shaw-related subfamily, member 3 protein-coding 0.098765 0.643443 -42(AGGCCCGGAAGC,+,0.00) -39(CCCGGAAGCCGG,-,0.00) -161(GCGCGCCAGTCC,+,0.00) 561_WT_peak_2914 chr16 78133357 78133562 + 102 NA non-coding (NR_120436, exon 1 of 6) non-coding (NR_120436, exon 1 of 6) 149 NR_120435 51741 Hs.461453 NM_016373 HPRD:05501 WWOX D16S432E|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding 0.107317 0.665049 -43(TTGACGCC,+,0.00) -59(TCCAGGCCCT,+,0.00) -32(CGTCGCGA,+,0.00) -119(CGGCTTTG,-,0.00) 11(GGAGCGGCCC,-,0.00) 561_WT_peak_2030 chr13 45973097 45973391 + 102 NA intron (NM_001010875, intron 7 of 9) intron (NM_001010875, intron 7 of 9) -19053 NR_047031 100874259 Hs.658038 NR_047031 SLC25A30-AS1 - SLC25A30 antisense RNA 1 ncRNA 0.013605 0.447458 27(CAGCTTCTGCCC,-,0.00) -84(GGCCAGGGCCCC,-,0.00) 561_WT_peak_1119 chr10 102270838 102271096 + 102 NA intron (NM_015490, intron 3 of 25) intron (NM_015490, intron 3 of 25) 8628 NM_015490 25956 Hs.18889 NM_015490 HPRD:15315 SEC31B SEC31B-1|SEC31L2 SEC31 homolog B (S. cerevisiae) protein-coding 0.007752 0.467181 0(AGGGTAAA,+,0.00) 561_WT_peak_2226 chr14 56826124 56826310 + 102 NA Intergenic MER83C|LTR|ERV1 -220294 NM_017799 54916 Hs.497253 NM_017799 HPRD:12624 TMEM260 C14orf101 transmembrane protein 260 protein-coding 0.000000 0.518717 -25(GCTGCCTGTTGC,-,0.00) 561_WT_peak_3236 chr17 47295440 47295630 + 102 NA intron (NM_001135186, intron 3 of 7) intron (NM_001135186, intron 3 of 7) -7599 NM_001198754 2793 Hs.181781 NM_031498 HPRD:06792 GNGT2 G-GAMMA-8|G-GAMMA-C|GNG8|GNG9|GNGT8 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 protein-coding 0.026316 0.602094 -42(GGAAGAGGGGGA,-,0.00) 6(AGCCACAT,-,0.00) -82(CCCCCGCC,-,0.00) -43(GGGAAGAGGGGG,+,0.00) -145(CAAAACTG,+,0.00) -80(CCCGCCCTGCCC,+,0.00) 561_WT_peak_5800 chr5 70363360 70363776 + 102 NA promoter-TSS (NM_001515) promoter-TSS (NM_001515) -71 NM_001515 2966 Hs.191356 NM_001515 HPRD:03450 GTF2H2 BTF2|BTF2P44|T-BTF2P44|TFIIH|p44 general transcription factor IIH, polypeptide 2, 44kDa protein-coding 0.096154 0.654676 177(AGAACCGGAAAG,+,0.00) -109(AGCCGCCT,-,0.00) -9(CCGCCCGA,+,0.00) -127(CGCCACGA,-,0.00) -39(CGCCGCTA,+,0.00) 41(GCCGCGCC,+,0.00) -13(AACTCCGCCC,-,0.00) -128(CCGCCACG,-,0.00),-107(CCGCCTAG,-,0.00) 221(GCTCTGCAGC,-,0.00) 561_WT_peak_2686 chr16 5121724 5122049 + 102 NA promoter-TSS (NM_019109) promoter-TSS (NM_019109) 76 NM_019109 56052 Hs.592086 NM_019109 ALG1 CDG1K|HMAT1|HMT-1|HMT1|MT-1|Mat-1|hMat-1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase protein-coding 0.104615 0.705521 54(CGGCCCGGCATG,+,0.00) -16(CTGCTGGCGCTG,-,0.00),34(GCGCTGGCGCCG,-,0.00) -100(TCGGTCTG,-,0.00) 42(GCCGGGGG,+,0.00) -123(CCCTCTCGGCCC,+,0.00) -90(GCTGCGCA,+,0.00) 35(CGCTGGCGCCGG,-,0.00) 142(CTTCTCGG,+,0.00) 53(GCGGCCCGGCAT,+,0.00) 561_WT_peak_130 chr1 27113879 27114381 + 102 NA promoter-TSS (NM_017837) promoter-TSS (NM_017837) -324 NM_017837 55650 Hs.259605 NM_017837 HPRD:07912 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis, class V protein-coding 0.055777 0.608350 192(GCGGGGTGGCGG,-,0.00) 277(GGCGCCGA,-,0.00) 199(GGCGGGGG,+,0.00) 325(GCCGCGCA,+,0.00) 279(CGCCGAGCGGCG,+,0.00) -79(CACCCAGGACGC,-,0.00) 561_WT_peak_640 chr1 180471724 180472139 + 102 NA promoter-TSS (NM_032360) promoter-TSS (NM_032360) 91 NM_032360 84320 Hs.200051 NM_032360 HPRD:12416 ACBD6 - acyl-CoA binding domain containing 6 protein-coding 0.120482 0.677885 -132(CCGTGGGGGCGG,-,0.00),80(GGGGGAAGGAGG,-,0.00) -146(CGGCTGGCGCTG,-,0.00) 219(CGTGCGCG,-,0.00) -54(CGACGCTA,+,0.00) -150(GGCGCGGC,-,0.00) 119(AGCGGAGTCGCG,+,0.00) -134(GGCCGTGGGGGC,-,0.00) -69(GCGGGGAAGC,+,0.00),43(GCTCCGGAGC,+,0.00),43(GCTCCGGAGC,-,0.00) -152(GGGGCGCGGCTG,+,0.00) 561_WT_peak_1344 chr11 64902092 64902437 + 102 NA promoter-TSS (NM_032431) promoter-TSS (NM_032431) -261 NM_172230 84447 Hs.75859 NM_032431 HPRD:07618 SYVN1 DER3|HRD1 synovial apoptosis inhibitor 1, synoviolin protein-coding 0.046377 0.578035 64(AGCCGCTT,-,0.00) -96(AGGGCTGGGC,-,0.00),100(AGGCCAGGGA,-,0.00) 21(CCTCGGAC,+,0.00) -44(GGGAGTCGGAGG,+,0.00) 36(CTCGGCCCCGCG,-,0.00) 34(GACTCGGCCC,-,0.00) 52(GCTGGGAAGG,+,0.00) 561_WT_peak_5848 chr5 90576338 90576567 + 102 NA Intergenic CpG 33767 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1 lung cancer associated transcript 1 (non-protein coding) ncRNA 0.117904 0.708696 -41(ACGTGCCG,+,0.00) -48(CGGCGCTA,+,0.00) -30(TGGGCGGC,-,0.00) -17(CCCGGGGCCCGC,-,0.00) -10(CCCGCAGCCGCG,+,0.00) 56(GGGCGGCGTC,+,0.00) -79(CGAGTCGG,+,0.00) -34(GGCCTGGGCGGC,-,0.00) -36(CCGGCCTGGGCG,+,0.00) 561_WT_peak_4984 chr3 4508545 4508928 + 102 NA exon (NM_182760, exon 1 of 9) exon (NM_182760, exon 1 of 9) 230 NM_001164674 285362 Hs.350475 NM_182760 HPRD:06399 SUMF1 AAPA3037|FGE sulfatase modifying factor 1 protein-coding 0.088773 0.671875 47(AGGCCGCT,+,0.00) 40(GGGCGCCAGGCC,+,0.00) -23(CGGGTACG,+,0.00) 58(GCGTGCCG,+,0.00) -75(CCGCCTCG,-,0.00) 42(GCGCCAGGCCGC,-,0.00) 561_WT_peak_7001 chr8 42698130 42698448 + 102 NA 5' UTR (NM_018105, exon 1 of 3) 5' UTR (NM_018105, exon 1 of 3) 185 NM_018105 55145 Hs.7432 NM_018105 HPRD:15496 THAP1 DYT6 THAP domain containing, apoptosis associated protein 1 protein-coding 0.066038 0.598746 -56(CCTTCCGGTCCT,-,0.00) -81(CGTAGGCG,-,0.00) 16(TCGGTTGG,-,0.00) 98(CCGTTTTG,-,0.00) -160(AGACCGGCCC,-,0.00) 561_WT_peak_1623 chr12 16034944 16035293 + 102 NA promoter-TSS (NM_007178) promoter-TSS (NM_007178) -170 NM_007178 11171 Hs.743971 NM_007178 HPRD:05816 STRAP MAWD|PT-WD|UNRIP serine/threonine kinase receptor associated protein protein-coding 0.080229 0.611429 -20(CTCGGCCGCG,-,0.00) 165(CCGCCCTCCCGC,+,0.00) 151(TCTACCCG,-,0.00) -22(AACTCGGCCG,-,0.00) 561_WT_peak_3945 chr2 2617092 2617394 + 102 NA Intergenic Intergenic -282198 NM_015025 23040 Hs.434418 NM_015025 HPRD:14797 MYT1L NZF1|ZC2HC4B myelin transcription factor 1-like protein-coding 0.052980 0.577558 -61(AAGCCGCT,+,0.00) 561_WT_peak_6468 chr6 130453019 130453615 + 102 NA intron (NM_001007102, intron 19 of 21) L1ME3A|LINE|L1 83713 NM_001277185 154075 Hs.440508 NM_152552 HPRD:11530 SAMD3 - sterile alpha motif domain containing 3 protein-coding 0.005034 0.393635 -42(TTTACCCA,-,0.00),253(AGGGTAAA,+,0.00) 561_WT_peak_162 chr1 33282811 33283061 + 102 NA promoter-TSS (NM_022753) promoter-TSS (NM_022753) -107 NM_001256121 64766 Hs.440880 NM_022753 HPRD:07803 S100PBP S100PBPR S100P binding protein protein-coding 0.088000 0.673307 -68(TCGCCGCC,+,0.00) -150(AGGGCTGGGA,-,0.00) -97(CGGCACCA,-,0.00),-60(GCGTGCCG,+,0.00) -116(CTGCTTCCCCCG,-,0.00) -149(GGGCTGGGAGCG,-,0.00),-108(CCCGCTCAGCCC,+,0.00) 75(CGGGAAAA,+,0.00) -135(CCCCATGGCTCC,-,0.00) 561_WT_peak_3773 chr19 41816078 41816314 + 102 NA 5' UTR (NM_052848, exon 1 of 5) 5' UTR (NM_052848, exon 1 of 5) 102 NM_052848 90324 Hs.437497 NM_052848 HPRD:14467 CCDC97 - coiled-coil domain containing 97 protein-coding 0.122881 0.670886 -103(AAGTGTCT,+,0.00) -3(GGCGGCGA,-,0.00) -58(GCCGGGCG,+,0.00) -16(TGGCGACG,-,0.00) -67(GCGGGGCCCGCC,+,0.00) -21(GGCCGTGGCGAC,-,0.00),-9(GGCGACGGCGGC,-,0.00) -2(GCGGCGAAGG,+,0.00) 561_WT_peak_56 chr1 10570969 10571348 + 102 NA intron (NM_004565, intron 2 of 8) intron (NM_004565, intron 2 of 8) 36155 NM_004565 5195 Hs.149983 NM_004565 HPRD:03477 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding 0.010554 0.386842 561_WT_peak_4040 chr2 42360171 42360433 + 102 NA Intergenic Intergenic -36188 NM_001145076 27436 Hs.713173 NM_019063 HPRD:06310 EML4 C2orf2|ELP120|EMAP-4|EMAPL4|ROPP120 echinoderm microtubule associated protein like 4 protein-coding 0.026718 0.551331 88(TGGCGGCT,+,0.00) -159(GCCTCTCAGC,-,0.00) 561_WT_peak_1491 chr11 116724422 116724668 + 101 NA intron (NM_025164, intron 20 of 23) intron (NM_025164, intron 20 of 23) -16207 NM_000039 335 Hs.93194 NM_000039 HPRD:02517 APOA1 - apolipoprotein A-I protein-coding 0.004065 0.433198 561_WT_peak_306 chr1 87169829 87170119 + 101 NA promoter-TSS (NM_001206653) promoter-TSS (NM_001206653) -279 NM_016009 51100 Hs.136309 NM_016009 HPRD:15333 SH3GLB1 Bif-1|PPP1R70|dJ612B15.2 SH3-domain GRB2-like endophilin B1 protein-coding 0.055172 0.505155 -120(AACCGGCT,+,0.00),-67(AGCGGCAT,-,0.00) 114(GGCGCCGA,-,0.00) -82(CGCGAACG,+,0.00) -113(TCGGTGGG,-,0.00) -62(CATCCAGGCCTC,-,0.00) 561_WT_peak_5235 chr3 124449269 124449642 + 101 NA non-coding (NR_033434, exon 1 of 5) non-coding (NR_033434, exon 1 of 5) 242 NR_033434 7372 Hs.2057 NM_000373 UMPS OPRT uridine monophosphate synthetase protein-coding 0.061662 0.601604 100(GGAAGAGGGTGA,-,0.00) 78(GCGGGAAGGAGG,-,0.00) 153(CAGACCGA,+,0.00) -103(TCGTGCAG,+,0.00),-38(TCGTGCTG,+,0.00) -70(GTACGACG,-,0.00) -134(CAAACAGGCAGC,+,0.00) 561_WT_peak_6379 chr6 79788018 79788314 + 101 NA promoter-TSS (NM_017934) promoter-TSS (NM_017934) -155 NM_017934 55023 Hs.511817 NM_017934 HPRD:10152 PHIP BRWD2|DCAF14|WDR11|ndrp pleckstrin homology domain interacting protein protein-coding 0.114865 0.700337 -159(CCGCCTTCGCGG,+,0.00),-122(CCGCGCCCCCGC,+,0.00) -61(CGCACGCG,-,0.00) -117(CCCCCGCC,-,0.00),-110(CCCCCGGC,-,0.00) -35(CCGCTCCTCCCC,-,0.00) -106(CGGCGCTA,+,0.00) -164(GTCCGCCG,-,0.00) -142(GGCTCGGCCC,-,0.00) -155(CTTCGCGG,+,0.00) 561_WT_peak_1549 chr12 2985649 2986319 + 101 NA promoter-TSS (NM_001252499) promoter-TSS (NM_001252499) 337 NM_001243089 2305 Hs.239 NM_021953 HPRD:03823 FOXM1 FKHL16|FOXM1B|HFH-11|HFH11|HNF-3|INS-1|MPHOSPH2|MPP-2|MPP2|PIG29|TGT3|TRIDENT forkhead box M1 protein-coding 0.067164 0.664680 341(GGGGGCCGAG,+,0.00) 385(CCGGGTCCCCGG,+,0.00) 186(TAGACGCC,+,0.00),286(TCGCCGCC,+,0.00) 367(GGGCTCGCGCCG,-,0.00) 24(GCCGCGGG,+,0.00),457(GCCGGGGG,+,0.00) 371(TCGCGCCG,+,0.00) 374(CGCCGGAC,+,0.00) -115(CGGTGTTG,-,0.00) 345(GCCGAGCCAGGG,+,0.00),452(CCGGGGCCGGGG,+,0.00) 67(GGGGCGCTTT,+,0.00),343(GGGCCGAGCC,+,0.00) 561_WT_peak_1130 chr10 104153687 104154086 + 101 NA promoter-TSS (NM_001077494) promoter-TSS (NM_001077494) 19 NM_001288724 4791 Hs.73090 NM_002502 HPRD:01239 NFKB2 CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p105|p52 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) protein-coding 0.095238 0.690000 166(CCGGGGTGGCGC,-,0.00) 69(GGGCTGGGGCCG,-,0.00),168(GGGGTGGCGCTG,-,0.00) -4(CCGACCGC,+,0.00),212(CCGGCCGA,+,0.00) 159(TCCCGGCCCG,+,0.00) 136(CAAAGCCG,+,0.00) 78(CCGTCGGCTTCC,-,0.00) -39(GCGGGCCCAGGG,+,0.00),176(GCTGGGTCAGCG,+,0.00) 193(CTTCTCGG,+,0.00) -32(CAGGGAGGCCGC,-,0.00) 561_WT_peak_2556 chr15 75495038 75495299 + 101 NA intron (NM_015492, intron 1 of 2) CpG 947 NM_015492 56905 Hs.17936 NM_015492 HPRD:13154 C15orf39 - chromosome 15 open reading frame 39 protein-coding 0.103448 0.683206 53(AATCGGCT,+,0.00) -20(TCGGCGCC,+,0.00) -92(CACGTACG,+,0.00),-90(CGTACGTG,-,0.00) -147(CCGAGCGA,+,0.00) -76(CGGGTTTG,-,0.00) -154(CCGGGGCCCGAG,+,0.00) -64(CGTGGCGG,+,0.00),-24(CGTCTCGG,+,0.00) -57(GCGGCCTGTGTG,+,0.00) 561_WT_peak_1649 chr12 32112002 32112371 + 101 NA promoter-TSS (NM_018169) promoter-TSS (NM_018169) -167 NM_018169 55196 Hs.445129 NM_018169 HPRD:07691 KIAA1551 C12orf35 KIAA1551 protein-coding 0.075881 0.616216 -124(CAGCCCCACCCC,+,0.00) 91(CCCTCGCAGCCA,+,0.00) -2(CGTCGGGC,+,0.00) -96(CAGTTTTG,-,0.00) 84(GGCGCGGC,-,0.00) 78(CGCGGCGGCGCG,+,0.00),78(CGCGGCGGCGCG,-,0.00) 42(GGGCCGGGTC,+,0.00),84(GGCGCGGCCC,-,0.00) -5(CCGCGTCG,-,0.00),103(CCGCCTCG,-,0.00) 79(GCGGCGGCGC,+,0.00),91(CCCTCGCAGC,-,0.00) 561_WT_peak_1703 chr12 52366644 52366872 + 101 NA intron (NM_020327, intron 1 of 8) intron (NM_020327, intron 1 of 8) 19594 NM_020327 91 Hs.438918 NM_004302 HPRD:03193 ACVR1B ACTRIB|ACVRLK4|ALK4|SKR2 activin A receptor, type IB protein-coding 0.026316 0.471616 561_WT_peak_4290 chr2 128459744 128460038 + 101 NA 3' UTR (NM_032740, exon 1 of 1) 3' UTR (NM_032740, exon 1 of 1) 1294 NM_032740 84826 Hs.345849 NM_032740 HPRD:14683 SFT2D3 - SFT2 domain containing 3 protein-coding 0.098639 0.623729 -100(GCCGGCCGAG,+,0.00) -131(AGTACGCG,-,0.00) -99(CCGGCCGA,+,0.00) -50(GCCCTGCCCT,+,0.00) -113(CGTCGGAG,+,0.00) -105(ACCGCGCC,+,0.00) -126(GCGGAGCCAGCG,+,0.00) 561_WT_peak_4387 chr2 183989140 183989334 + 101 NA intron (NR_109856, intron 1 of 7) intron (NR_109856, intron 1 of 7) 154 NM_001287585 129401 Hs.180591 NM_138285 HPRD:10486 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35kDa protein-coding 0.041237 0.533333 -90(GGCCCGCGTT,+,0.00) 561_WT_peak_2560 chr15 75932148 75932481 + 101 NA exon (NM_018285, exon 1 of 1) exon (NM_018285, exon 1 of 1) 350 NM_018285 55272 Hs.513043 NM_018285 HPRD:12664 IMP3 BRMS2|C15orf12|MRPS4 IMP3, U3 small nucleolar ribonucleoprotein protein-coding 0.129129 0.688623 18(CCGCGCCAGCTC,+,0.00) -25(CGCGCACG,+,0.00),-23(CGCACGCG,-,0.00),-7(CGCGTTCG,+,0.00) 35(CGGCACGG,-,0.00),109(TCGTGCAG,+,0.00) -160(TGCGCAGC,-,0.00),-27(AGCGCGCA,+,0.00),17(GCCGCGCC,+,0.00) 10(CGCAGGCGCCGC,-,0.00) 561_WT_peak_6001 chr5 158634841 158635111 + 101 NA promoter-TSS (NM_144726) promoter-TSS (NM_144726) -142 NM_144726 153830 Hs.349306 NM_144726 HPRD:08113 RNF145 - ring finger protein 145 protein-coding 0.025926 0.464945 14(CCTCTCCTTCCC,-,0.00) 561_WT_peak_3681 chr19 18401176 18401434 + 101 NA Intergenic Intergenic 8418 NR_036155 100422833 NR_036155 miRBase:MI0014232 MIR3188 - microRNA 3188 ncRNA 0.019380 0.610039 -134(GGGTTTTG,-,0.00),34(CGGTTTGG,-,0.00) -81(TTTCCCCG,-,0.00) 561_WT_peak_4230 chr2 99224865 99225069 + 101 NA promoter-TSS (NM_014044) promoter-TSS (NM_014044) 14 NM_001008215 493753 Hs.596537 NM_001008215 HPRD:17563 COA5 6330578E17Rik|C2orf64|Pet191 cytochrome c oxidase assembly factor 5 protein-coding 0.151961 0.721951 -109(GCAACCGGGTCG,-,0.00),-72(GGGACCGGAAGC,+,0.00) -12(GGGGGCCGAG,+,0.00) -139(CGGACGCG,-,0.00),4(CGCGTCCG,+,0.00),6(CGTCCGCG,-,0.00) -10(GGGCCGAGAGGT,-,0.00) -45(CCGGCGGGCCGC,-,0.00) 561_WT_peak_430 chr1 144519993 144520264 + 101 NA intron (NM_001278267, intron 52 of 130) CpG 92591 NR_003242 767846 Hs.657186 NR_003242 PFN1P2 C1orf152|COAS3 profilin 1 pseudogene 2 pseudo 0.110701 0.709559 -43(CGGGGAGGCCGG,-,0.00),-20(CCGGGCTCGCGG,-,0.00) -164(GGCGGCGA,-,0.00) -48(CCGGTCGG,-,0.00) -93(CCCCCGGC,-,0.00) -150(TCCGCGCA,+,0.00) -74(GGTGCCATGGCA,+,0.00) -104(GCGGCAGGCCGC,-,0.00) 561_WT_peak_3702 chr19 21688456 21688712 + 101 NA intron (NM_001001415, intron 1 of 3) intron (NM_001001415, intron 1 of 3) 147 NM_001001415 353088 Hs.572567 NM_001001415 HPRD:18342 ZNF429 - zinc finger protein 429 protein-coding 0.042969 0.591440 22(CGTGGCGG,+,0.00) 19(GGCCGTGGCGGA,-,0.00) 561_WT_peak_7038 chr8 66863789 66864083 + 101 NA Intergenic Intergenic -69855 NM_033105 85479 Hs.491885 NM_033105 HPRD:07474 DNAJC5B CSP-beta DnaJ (Hsp40) homolog, subfamily C, member 5 beta protein-coding 0.013605 0.494915 -38(CAAACAGGAAGT,+,0.00) 561_WT_peak_2244 chr14 61919349 61919524 + 101 NA intron (NM_006255, intron 6 of 13) intron (NM_006255, intron 6 of 13) 117476 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LOC101927780 - uncharacterized LOC101927780 ncRNA 0.000000 0.454545 561_WT_peak_4126 chr2 70141527 70141808 + 101 NA promoter-TSS (NM_001202514) promoter-TSS (NM_001202514) -506 NM_001202514 4084 Hs.468908 NM_002357 HPRD:02487 MXD1 BHLHC58|MAD|MAD1 MAX dimerization protein 1 protein-coding 0.081851 0.702128 107(AGCCACTT,-,0.00) -71(TGGACGCC,+,0.00) -147(CAGACCGA,+,0.00) -99(CGACACGA,-,0.00) 55(CCCTCCCAGCCA,+,0.00) -17(GTCCGAGG,-,0.00),44(CGCCGGAC,+,0.00) -45(TTTCCCCG,-,0.00) 35(GCCGCCCA,+,0.00) 32(AGCGCCGCCC,-,0.00) 10(GCTCCGCAGC,-,0.00) 86(GCAGCCAGGCTG,+,0.00),87(CAGCCAGGCTGC,-,0.00) 561_WT_peak_1341 chr11 64884804 64885157 + 101 NA exon (NM_014205, exon 1 of 1) exon (NM_014205, exon 1 of 1) 190 NM_014205 741 Hs.121025 NM_014205 HPRD:05200 ZNHIT2 C11orf5|FON zinc finger, HIT-type containing 2 protein-coding 0.113314 0.700565 -33(AGGCGGCT,+,0.00) -154(CGGCGCCAGCCG,+,0.00) -158(CGCCCGGC,-,0.00),-121(GCCGGGCG,+,0.00),118(CCCCCGCC,-,0.00) -155(CCGGCGCCAGCC,+,0.00),-114(GCCGGGCCGGAG,+,0.00) -35(CTAGGCGG,+,0.00) 561_WT_peak_5885 chr5 118406658 118406959 + 101 NA promoter-TSS (NM_005509) promoter-TSS (NM_005509) -276 NM_001290322 1657 Hs.181042 NM_005509 HPRD:09294 DMXL1 - Dmx-like 1 protein-coding 0.086379 0.622517 76(GAGCGGCTGCCC,+,0.00) 43(CGCGTACT,+,0.00) -78(CCGAGCGA,+,0.00) 115(GCGGCCTTCCTG,+,0.00) 561_WT_peak_2643 chr16 577431 577646 + 101 NA promoter-TSS (NM_005632) promoter-TSS (NM_005632) -131 NR_024121 64493 Hs.721553 NR_024121 LINC00235 C16orf10|NCRNA00235 long intergenic non-protein coding RNA 235 ncRNA 0.097674 0.740741 -63(GCGCCTCCCGGG,+,0.00),1(CCGGGCGGTCGG,-,0.00) 23(GGGCGCCACCCG,+,0.00) 5(GCGGTCGG,-,0.00) -99(TCGGGCCG,+,0.00) 14(GGACTGGGAGGG,-,0.00) 10(CGGCGGAC,+,0.00) -162(TGCAGGCCCCGC,-,0.00) 561_WT_peak_4453 chr2 206949824 206950192 + 101 NA intron (NM_017759, intron 1 of 10) CpG 898 NM_017759 54891 Hs.445036 NM_017759 HPRD:07894 INO80D - INO80 complex subunit D protein-coding 0.103261 0.742547 23(GGAGGAGGGGGA,-,0.00) 179(GCCTCCGGGCCG,-,0.00) -18(CCGCCCGCCCCG,+,0.00) 185(GGGCCGGCGCGG,-,0.00) 153(GCCCGGGCCT,+,0.00) 97(GCCGGGCG,+,0.00) 84(CGGGGGAAGGGG,+,0.00) -17(CGCCCGCCCCGC,-,0.00) -114(ACAGCGGCCC,-,0.00) -26(CCGCCAGGCCGC,-,0.00),1(CCGGCCTGGCCG,+,0.00) 561_WT_peak_6363 chr6 64345821 64346173 + 101 NA promoter-TSS (NM_001290260) promoter-TSS (NM_001290260) 290 NM_001290259 23469 Hs.348921 NM_015153 HPRD:08477 PHF3 - PHD finger protein 3 protein-coding 0.107955 0.705382 -13(GCCCCCTCCTCC,+,0.00),-10(CCCTCCTCCTCC,+,0.00) -60(GCGACGCC,+,0.00) -43(CGCGTACC,+,0.00) 169(CCCGCGGC,-,0.00) 161(CCGCCCCTCCCG,-,0.00) -62(CAGCGACG,-,0.00) 155(GCCTCTCCGCCC,+,0.00) 173(CGGCGGAC,+,0.00) 8(GCGGCGGCAGCG,+,0.00),88(CCGCGGCCAGGG,+,0.00) 142(AGCGCCTCCGCG,-,0.00) -63(GCAGCGACGC,+,0.00) 561_WT_peak_1845 chr12 109531115 109531395 + 101 NA promoter-TSS (NM_001145375) promoter-TSS (NM_001145375) 38 NM_001205180 121642 Hs.374458 NM_001001655 HPRD:14712 ALKBH2 ABH2 alkB, alkylation repair homolog 2 (E. coli) protein-coding 0.092857 0.637011 12(TCGGTCGC,-,0.00) 73(GCCGGGCG,+,0.00) -138(CGGGTAAA,+,0.00) -66(GCATCGCAGC,-,0.00) 71(CAGCCGGGCGGC,-,0.00) 561_WT_peak_360 chr1 109968699 109969015 + 101 NA intron (NM_001199774, intron 1 of 8) CpG 213 NM_001199772 5686 Hs.485246 NM_002790 HPRD:01464 PSMA5 PSC5|ZETA proteasome (prosome, macropain) subunit, alpha type, 5 protein-coding 0.079114 0.665615 109(AGCGGCTA,-,0.00) 8(TCCCGGGCCT,+,0.00) 76(CGGGTAAG,+,0.00) -11(CCCAGGCCGCGC,-,0.00),-3(GCGCGGCCAGGT,+,0.00) 109(AGCGGCTACGCG,-,0.00) 114(CTACGCGG,+,0.00) -13(AACCCAGGCCGC,-,0.00) 561_WT_peak_387 chr1 113161319 113161880 + 101 NA promoter-TSS (NM_006135) promoter-TSS (NM_006135) 441 NM_138727 54879 Hs.201921 NM_017744 HPRD:18112 ST7L FAM4B|ST7R|STLR suppression of tumorigenicity 7 like protein-coding 0.060606 0.617438 138(CCGCCAGCCCGG,+,0.00) -63(TCGACTCC,+,0.00) 97(CAGCCCCAGCCC,+,0.00),136(CCCCGCCAGCCC,+,0.00) 144(GCCCGGCCCG,+,0.00),185(AGGCCAGGGA,-,0.00) 13(CCCCCGCC,-,0.00) 109(CGCCACGA,-,0.00),252(TCTTGCCG,+,0.00) 172(TAGCGTCG,-,0.00) 276(GAGCTGGGAGGG,-,0.00) 130(CCCAGTCCCCGC,-,0.00) 93(AAAGCAGCCC,-,0.00),122(AACGAGGCCC,-,0.00),143(AGCCCGGCCC,-,0.00) 108(CCGCCACG,-,0.00),236(CCGCCACG,-,0.00),379(CCGAGAAG,-,0.00) 15(CCCGCCCTGCCC,+,0.00),235(GCCGCCACGGTC,+,0.00) 138(CCGCCAGCCCGG,-,0.00),228(CACCCACGCCGC,-,0.00) 561_WT_peak_2608 chr15 91381312 91381517 + 101 NA Intergenic Intergenic -30408 NM_002569 5045 Hs.513153 NM_002569 HPRD:00653 FURIN FUR|PACE|PCSK3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding 0.039024 0.631068 19(GGAGCAGGCGGG,-,0.00) 25(GGCGGGGG,+,0.00) 7(TGGGTAAA,+,0.00) -94(GCACCGCAGC,-,0.00) 561_WT_peak_234 chr1 52344777 52345110 + 101 NA promoter-TSS (NM_001101662) promoter-TSS (NM_001101662) -334 NM_001101662 4898 Hs.584782 NM_002525 HPRD:04036 NRD1 hNRD1|hNRD2 nardilysin (N-arginine dibasic convertase) protein-coding 0.051051 0.482036 32(CGGCCCGA,-,0.00) -98(CCGGGGCGAGCC,+,0.00) 561_WT_peak_2513 chr15 64752592 64752818 + 101 NA Intergenic CpG -38914 NM_015042 23060 Hs.595451 NM_015042 HPRD:18754 ZNF609 - zinc finger protein 609 protein-coding 0.106195 0.665198 0(CCGCGTCTTCCG,-,0.00) -123(AGCGCGCA,+,0.00) 35(GCGGCGGCGGCG,+,0.00),38(GCGGCGGCGGCG,+,0.00) 561_WT_peak_413 chr1 120630583 120630801 + 101 NA Intergenic Intergenic -18375 NM_024408 4853 Hs.487360 NM_024408 HPRD:02606 NOTCH2 AGS2|HJCYS|hN2 notch 2 protein-coding 0.009174 0.429224 -39(AAGTGTCT,+,0.00) 561_WT_peak_5075 chr3 43431252 43431421 + 101 NA intron (NM_001204831, intron 11 of 12) intron (NM_001204831, intron 11 of 12) -37882 NR_046757 100873954 Hs.600984 NR_046757 SNRK-AS1 - SNRK antisense RNA 1 ncRNA 0.029586 0.447059 -72(GGGCTGGGAGGA,-,0.00) 561_WT_peak_5976 chr5 145826425 145826756 + 101 NA promoter-TSS (NM_001040006) promoter-TSS (NM_001040006) -283 NM_001040006 10915 Hs.443465 NM_006706 HPRD:10393 TCERG1 CA150|TAF2S|Urn1 transcription elongation regulator 1 protein-coding 0.060423 0.554217 -148(TAGCGGCT,+,0.00),-147(AGCGGCTT,-,0.00) -13(CCGACAGA,+,0.00) -3(CGTGGCTA,+,0.00) -120(CGGTTTAG,-,0.00),-99(CGATTTTG,-,0.00) -113(GGCGCGGC,-,0.00) -113(GGCGCGGCCC,-,0.00) 151(GGCGCCTTGCCC,+,0.00) 561_WT_peak_1206 chr11 10480662 10481042 + 101 NA intron (NM_001025390, intron 1 of 14) intron (NM_001025390, intron 1 of 14) -1826 NM_001172430 272 Hs.501890 NM_000480 HPRD:00041 AMPD3 - adenosine monophosphate deaminase 3 protein-coding 0.007895 0.532808 123(GAGCTGAGAGGG,-,0.00) 561_WT_peak_409 chr1 117602394 117602576 + 101 NA promoter-TSS (NM_003594) promoter-TSS (NM_003594) -373 NR_110786 101929099 Hs.559118 NR_110786 ENSG00000236137 LOC101929099 - uncharacterized LOC101929099 ncRNA 0.098901 0.710383 -67(GAGCGCCAGCCT,+,0.00) -74(CGCGCACG,+,0.00) -76(AGCGCGCA,+,0.00) -140(CGCGGCTCGGCC,-,0.00),-86(CGCGGAGCCCAG,+,0.00) 561_WT_peak_247 chr1 53879023 53879251 + 101 NA Intergenic Intergenic 26556 NR_002314 163742 Hs.99394 NR_002314 ENSG00000236253 SLC25A3P1 - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 pseudogene 1 pseudo 0.004386 0.388646 -130(CTTGTCGG,+,0.00) 561_WT_peak_4486 chr2 230045454 230045625 + 101 NA intron (NM_001100818, intron 1 of 2) LSU-rRNA_Hsa|rRNA|rRNA 90518 NM_017933 55022 Hs.745038 NM_017933 HPRD:07944 PID1 NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding 0.087719 0.610465 -14(CCGACTGA,+,0.00) 561_WT_peak_2017 chr13 42967313 42967657 + 101 NA Intergenic Intergenic 121196 NM_016248 11215 Hs.105105 NM_016248 HPRD:05261 AKAP11 AKAP-11|AKAP220|PPP1R44|PRKA11 A kinase (PRKA) anchor protein 11 protein-coding 0.008721 0.417391 561_WT_peak_7051 chr8 71436140 71436408 + 101 NA Intergenic L2b|LINE|L2 52905 NR_110653 101926892 Hs.367827 NR_110653 ENSG00000253967 LOC101926892 - uncharacterized LOC101926892 ncRNA 0.007463 0.416357 85(AGGCCTCT,+,0.00) 561_WT_peak_4146 chr2 74347397 74347744 + 101 NA Intergenic CpG 27469 NM_212552 388962 Hs.61472 NM_212552 HPRD:14209 BOLA3 MMDS2 bolA family member 3 protein-coding 0.112392 0.704023 136(GGGACCGGAAGG,+,0.00) 98(GGCGTCGT,-,0.00) -30(GGGCTGGTGCCG,-,0.00) -118(CGGCAAGA,-,0.00),-89(CGGCAGGA,-,0.00),-26(TGGTGCCG,+,0.00) 141(CGGAAGGAGGAG,+,0.00) -20(CGTGGCTA,+,0.00) -154(GGCCGACG,-,0.00) 136(GGGACCGGAAGG,+,0.00),159(AGGAGCCCAAGG,+,0.00) 103(CGTCGCGG,+,0.00) -144(CTCCACGGCGGC,-,0.00) 155(GCTGAGGAGC,+,0.00) 561_WT_peak_2053 chr13 50655893 50656131 + 101 NA promoter-TSS (NR_002605) promoter-TSS (NR_002605) -293 NR_002605 10301 Hs.591229 NM_005887 HPRD:16150 DLEU1 BCMS|BCMS1|DLB1|DLEU2|LEU1|LEU2|LINC00021|NCRNA00021|XTP6 deleted in lymphocytic leukemia 1 (non-protein coding) ncRNA 0.071429 0.552301 -95(CTGCGCCAGCCT,+,0.00) -159(CCTGCGGGTCCC,-,0.00) 561_WT_peak_7250 chr9 35657712 35658079 + 101 NA promoter-TSS (NM_001195201) promoter-TSS (NM_001195201) 120 NR_003051 6023 Hs.587502 NR_003051 ENSG00000269900 RMRP CHH|NME1|RMRPR|RRP2 RNA component of mitochondrial RNA processing endoribonuclease ncRNA 0.076294 0.578804 129(CAGCACGA,-,0.00) 42(CACTCTCTGCCC,+,0.00) -63(GGGAGCTGACGG,+,0.00) -94(TGCGCGGA,-,0.00) -34(CGCCGCTCAGCG,-,0.00) -12(CTTGGCGG,+,0.00),73(CTAGGCGG,+,0.00) 561_WT_peak_2347 chr14 95623621 95624294 + 101 NA promoter-TSS (NR_015415) promoter-TSS (NR_015415) -68 NR_015415 400242 Hs.497573 NM_207443 HPRD:13502 DICER1-AS1 DICER1-AS DICER1 antisense RNA 1 ncRNA 0.115899 0.704748 202(GGAGCAGGGAGA,-,0.00),227(CGCGGAGGCCGG,-,0.00) 61(AGCCGCTT,-,0.00) -151(CAGGCCTCCCGG,+,0.00),312(CCGGGAACCCGC,-,0.00) -23(TCGACCCC,+,0.00) 181(TCCCGGCCCC,+,0.00),462(TCCCTCCCCT,+,0.00) -136(CGCCCGGC,-,0.00),-121(CCCCCGCC,-,0.00),14(CGCCCGGC,-,0.00),43(CCCGCGGC,-,0.00) 130(CGGCATGA,-,0.00) 449(CCCTCTGAGCAC,+,0.00) -37(GCCGCGCC,+,0.00),5(ACTGCGCA,+,0.00),7(TGCGCAGC,-,0.00) -126(CGCCGCCCCCGC,-,0.00),-10(CCGGCGCCTGCG,+,0.00),-1(GCGGAGACTGCG,+,0.00) -144(CCCGGAGCCGCC,+,0.00),-35(CGCGCCTCCGCC,-,0.00),93(CGCCCCTCCGCG,-,0.00) -28(CCGCCTCG,-,0.00),125(CGTGGCGG,+,0.00) 122(CCCCGTGGCGGC,-,0.00) -130(GCGCCGCCGC,-,0.00),186(GCCCCCCAGC,-,0.00) 561_WT_peak_1995 chr13 37574465 37574894 + 100 NA promoter-TSS (NM_181503) promoter-TSS (NM_181503) 1 NM_181503 11340 Hs.294041 NM_181503 HPRD:09351 EXOSC8 CIP3|EAP2|OIP2|RRP43|Rrp43p|bA421P11.3|p9 exosome component 8 protein-coding 0.060606 0.527907 229(GGCCCCGGCATC,+,0.00) 142(AGGCGTCT,+,0.00) 561_WT_peak_3243 chr17 47866038 47866291 + 100 NA 5' UTR (NM_001199156, exon 1 of 13) 5' UTR (NM_001199156, exon 1 of 13) 183 NM_001199158 11143 Hs.21907 NM_007067 HPRD:07135 KAT7 HBO1|HBOA|MYST2|ZC2HC7 K(lysine) acetyltransferase 7 protein-coding 0.106719 0.661417 -25(TCGGGCCG,+,0.00) -27(CGTCGGGC,+,0.00) -88(CCGCCACG,-,0.00),-2(CCGCGAAG,-,0.00) -89(GCCGCCACGGAG,+,0.00) -143(GCTGAGAGGC,+,0.00) 561_WT_peak_2495 chr15 57025256 57025491 + 100 NA intron (NM_001002843, intron 1 of 20) CpG 911 NM_017661 54816 Hs.511477 NM_017661 HPRD:15448 ZNF280D SUHW4|ZNF634 zinc finger protein 280D protein-coding 0.085106 0.669492 2(AGGCGGCT,+,0.00) 29(CCTCCTCCCCCG,+,0.00) 35(CCCCCGCC,-,0.00) -141(CGGCACAA,-,0.00),16(TCGCGCCG,+,0.00) 45(GGCCGACG,-,0.00) -97(CAAAACCA,+,0.00) -44(AGGAGCAGAAGG,+,0.00) -24(TGCGCGGC,-,0.00) 0(CGAGGCGG,+,0.00),11(CCGCGTCG,-,0.00) 561_WT_peak_7622 chrX 148607006 148607434 + 100 NA Intergenic Intergenic 14092 NR_027455 100131434 Hs.669775 NM_001039766 LINC00893 - long intergenic non-protein coding RNA 893 ncRNA 0.030374 0.561772 95(GCTTCTGCTCCC,-,0.00) -81(GCTTCCCTTTTC,-,0.00) 126(CCCCGAGCCGCG,+,0.00) 130(GAGCCGCGTT,+,0.00) 561_WT_peak_3651 chr19 14260249 14260762 + 100 NA 3' UTR (NM_014921, exon 23 of 23) 3' UTR (NM_014921, exon 23 of 23) 12541 NR_045214 100507373 Hs.720437 NR_045214 ENSG00000267169 LOC100507373 - uncharacterized LOC100507373 ncRNA 0.042885 0.570039 55(GATGCCGGGCAG,-,0.00) 1(AGGCCTCT,+,0.00) 59(CCGGGCAGGCGG,-,0.00),173(CCGCCCGCCCCG,+,0.00) 263(GGGCTGGCCCGG,-,0.00) 203(CGTACACG,-,0.00) -136(CCCCATCTTCCC,-,0.00) 174(CGCCCGCCCCGG,-,0.00),185(GCGGGGACTGGG,+,0.00) -143(AAATCAGCCC,-,0.00) 222(GCTGCCAGGC,+,0.00) 168(GCGGCCCGCCCG,+,0.00) 561_WT_peak_7570 chrX 70288516 70288724 + 100 NA promoter-TSS (NM_001256187) promoter-TSS (NM_001256187) -322 NM_013346 29934 Hs.260750 NM_013346 HPRD:06719 SNX12 - sorting nexin 12 protein-coding 0.038462 0.531100 561_WT_peak_3864 chr19 50380359 50380647 + 100 NA promoter-TSS (NM_001168222) promoter-TSS (NM_001168222) 141 NM_001098632 84335 Hs.515542 NM_032375 HPRD:12441 AKT1S1 Lobe|PRAS40 AKT1 substrate 1 (proline-rich) protein-coding 0.065972 0.570934 -164(TGGCGGCT,+,0.00) -144(TCGCGACG,-,0.00) -116(GGGCCGCTTC,+,0.00) 561_WT_peak_2859 chr16 58060175 58060531 + 100 NA exon (NM_002428, exon 1 of 10) exon (NM_002428, exon 1 of 10) 1071 NM_002428 4324 Hs.80343 NM_002428 HPRD:03775 MMP15 MT2-MMP|MTMMP2|SMCP-2 matrix metallopeptidase 15 (membrane-inserted) protein-coding 0.115169 0.736695 -96(GGCGCCGA,-,0.00) -137(CGCGTGCG,+,0.00) 89(GCCCTGCCCT,+,0.00) 84(CCCCCGCC,-,0.00) -155(CGTCGCAA,+,0.00) 114(GGGCTTGGAGGG,-,0.00) -13(GGCGCGGC,-,0.00) 167(AGCGGAGACGCG,+,0.00) 86(CCCGCCCTGCCC,+,0.00) 561_WT_peak_7556 chrX 54209287 54209507 + 100 NA exon (NM_017848, exon 1 of 16) exon (NM_017848, exon 1 of 16) 294 NM_017848 54954 Hs.86045 NM_017848 HPRD:06480 FAM120C CXorf17|ORF34 family with sequence similarity 120C protein-coding 0.118182 0.764706 -57(CCGCGCCCCCGG,+,0.00) -73(TGGTGCCG,+,0.00) -23(CGGAAGCGGCGG,+,0.00) -147(GCGGCGGCGGCG,+,0.00),-141(GCGGCGGCAGCG,+,0.00),6(CCCTGGCGGCGC,-,0.00) 17(CGTGGAGCCCCG,+,0.00) -66(GAATCGGCCC,-,0.00) 4(GCCCCTGGCGGC,-,0.00) 561_WT_peak_1613 chr12 12939673 12939896 + 100 NA intron (NM_030817, intron 1 of 1) CpG 1243 NM_030817 81575 Hs.23388 NM_030817 HPRD:13153 APOLD1 VERGE apolipoprotein L domain containing 1 protein-coding 0.107623 0.691964 22(CGGCCCGGGAGC,+,0.00) 31(AGCCGCAT,-,0.00) -64(CCGGGCAGCAGG,-,0.00) -87(TCGTGCCA,+,0.00) 41(GCCCGACG,-,0.00) 28(GGGAGCCGCATG,+,0.00) 50(GCTGCGGCGC,+,0.00) 561_WT_peak_6737 chr7 77325342 77325555 + 100 NA promoter-TSS (NM_198467) promoter-TSS (NM_198467) -295 NM_198467 222194 Hs.72451 NM_198467 RSBN1L - round spermatid basic protein 1-like protein-coding 0.079812 0.630841 -18(CCGGGCACGCGA,-,0.00) -43(GGCGGGGG,+,0.00) 23(CCCTCGCAGCGC,+,0.00) -68(GGCCATGGCAGA,-,0.00) 23(CCCTCGCAGC,-,0.00) 561_WT_peak_4663 chr20 47463066 47463215 + 100 NA Intergenic Intergenic -18720 NM_020820 57580 Hs.153310 NM_020820 HPRD:06066 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding 0.020134 0.546667 -105(AAGCCAGGCAGC,-,0.00) 561_WT_peak_3732 chr19 36249042 36249273 + 100 NA intron (NM_001039887, intron 1 of 11) CpG 113 NM_001039887 148137 Hs.527982 NM_144692 HPRD:14079 PROSER3 C19orf55 proline and serine rich 3 protein-coding 0.086580 0.659483 -97(GCCGCGGG,+,0.00) -162(AAGCGACG,-,0.00),14(AGTCGCTA,+,0.00) -101(GGGAGCCGCGGG,+,0.00) 57(GCTCCACAGC,-,0.00) 561_WT_peak_2340 chr14 93234566 93234895 + 100 NA Intergenic Intergenic -19683 NM_005606 5641 Hs.18069 NM_005606 HPRD:04017 LGMN AEP|LGMN1|PRSC1 legumain protein-coding 0.003040 0.433333 561_WT_peak_6475 chr6 133135276 133135905 + 100 NA promoter-TSS (NM_001016) promoter-TSS (NM_001016) -118 NM_001016 6206 Hs.546289 NM_001016 RPS12 S12 ribosomal protein S12 protein-coding 0.074722 0.569841 293(CGCGGAGGCGGA,-,0.00) 184(AGCCACCT,-,0.00),264(AGGCCTCT,+,0.00) 20(TCGGTGGG,-,0.00) 382(TCGTGACG,+,0.00) 133(CAGAACCG,+,0.00) 448(TTCACCCG,-,0.00) 164(CCCAGGCCCGGC,-,0.00),274(CCCTGCCGCCGC,-,0.00) 283(CGCCGAGTCGCG,+,0.00) 63(CCGCGTAG,-,0.00),285(CCGAGTCG,-,0.00),323(CGAGGCGG,+,0.00) 93(CCGGCCTGGCAG,+,0.00) 561_WT_peak_1539 chr12 95315 95671 + 100 NA Intergenic (TTAGGG)n|Simple_repeat|Simple_repeat 7509 NR_028269 100288778 Hs.585931 NR_028269 LOC100288778 - WAS protein family homolog 1 pseudogene pseudo 0.002809 0.521008 -59(CGGTTTGG,-,0.00) 561_WT_peak_7598 chrX 102941987 102942197 + 100 NA promoter-TSS (NM_001142430) promoter-TSS (NM_001142430) -120 NR_038978 340544 Hs.441076 NR_038978 MORF4L2-AS1 - MORF4L2 antisense RNA 1 ncRNA 0.038095 0.516588 -52(AAGTGTCT,+,0.00) 561_WT_peak_4242 chr2 102875169 102875455 + 100 NA Intergenic Intergenic -52650 NM_001282408 9173 Hs.66 NM_003856 HPRD:03123 IL1RL1 DER4|FIT-1|IL33R|ST2|ST2L|ST2V|T1 interleukin 1 receptor-like 1 protein-coding 0.003497 0.376307 -42(CAAAACCA,+,0.00) 561_WT_peak_2364 chr14 100751874 100752190 + 100 NA Intergenic CpG 8338 NR_106822 102466730 NR_106822 MIR6764 hsa-mir-6764 microRNA 6764 ncRNA 0.104430 0.757098 53(CGAGGAGGGAGG,-,0.00) 41(GGCGGCGA,-,0.00),45(GCGACGCC,+,0.00) -124(CGCTTACG,+,0.00) -15(TCGGGCGG,-,0.00) -89(GGCCACGGGGGC,-,0.00),4(GCCGCCAGGGCC,+,0.00) 42(GCGGCGACGC,+,0.00) 561_WT_peak_4310 chr2 135675680 135675951 + 100 NA promoter-TSS (NR_037649) promoter-TSS (NR_037649) 361 NR_036549 100129961 Hs.729028 NR_036549 CCNT2-AS1 - CCNT2 antisense RNA 1 ncRNA 0.073801 0.558824 -26(GGCGGAGGCCGG,-,0.00) -64(TCAACGCC,+,0.00) -7(CGCCTACG,+,0.00) -77(TTTCCCCG,-,0.00) 5(TGCGCGGA,-,0.00) 7(CGCGGACCCGCC,+,0.00) -45(CTAGGCGG,+,0.00) 561_WT_peak_5711 chr5 41870211 41870666 + 100 NA exon (NM_000436, exon 1 of 17) exon (NM_000436, exon 1 of 17) 306 NR_046635 100874002 Hs.375537 NR_046635 OXCT1-AS1 - OXCT1 antisense RNA 1 ncRNA 0.109890 0.679825 77(AGCCGCCA,-,0.00) 162(CCGGGCGGGCTG,-,0.00) 186(CGCGTCGA,-,0.00) 88(TCGGGCGG,-,0.00) 212(TCGAGCCG,+,0.00) -120(ACCGCGCC,+,0.00) -148(CGCGTCGCCGCG,+,0.00),-148(CGCGTCGCCGCG,-,0.00) -147(GCGTCGCCGC,-,0.00) 561_WT_peak_7065 chr8 90778117 90778347 + 100 NA intron (NM_003821, intron 3 of 10) L1MD1|LINE|L1 8257 NM_003821 8767 Hs.103755 NM_003821 HPRD:04585 RIPK2 CARD3|CARDIAK|CCK|GIG30|RICK|RIP2 receptor-interacting serine-threonine kinase 2 protein-coding 0.004348 0.372294 561_WT_peak_7090 chr8 101962641 101963136 + 100 NA promoter-TSS (NM_001135702) promoter-TSS (NM_001135702) -89 NM_001135702 7534 Hs.492407 NM_003406 HPRD:03183 YWHAZ 14-3-3-zeta|HEL-S-3|HEL4|KCIP-1|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta protein-coding 0.086869 0.673387 311(AGCGGCTA,-,0.00) 60(CCGCGCCCCCGC,+,0.00),200(GCGCCTTCCCCG,+,0.00) 33(CCGACCGG,+,0.00),109(CCGCCCGA,+,0.00) 65(CCCCCGCC,-,0.00) 242(CGTCTCTA,+,0.00) 37(CCGGAGCCAGAG,+,0.00) -74(GGCTCCGCCC,-,0.00),105(GAAGCCGCCC,-,0.00) 166(GCCCCGCCGC,-,0.00) 164(CAGCCCCGCCGC,-,0.00) 561_WT_peak_6335 chr6 43597077 43597247 + 100 NA promoter-TSS (NM_019096) promoter-TSS (NM_019096) -117 NM_001003690 9587 Hs.122346 NM_014628 HPRD:10065 MAD2L1BP CMT2 MAD2L1 binding protein protein-coding 0.094118 0.625731 -117(TCGCCGCC,+,0.00) -76(GCCGCGGG,+,0.00) -65(CGTCGGAG,+,0.00) -43(CGCGCCTTGGCG,+,0.00),-41(CGCCTTGGCGCG,-,0.00) 561_WT_peak_7525 chrX 40943920 40944471 + 100 NA promoter-TSS (NM_001039590) promoter-TSS (NM_001039590) -693 NM_001039590 8239 Hs.77578 NM_004652 HPRD:02091 USP9X DFFRX|FAF|FAM|MRX99 ubiquitin specific peptidase 9, X-linked protein-coding 0.099819 0.668478 159(AGCCACCT,-,0.00) 308(CCGGGTTCCCGG,+,0.00) -132(GGCGGCGA,-,0.00) 349(CGGCTCGCGCTG,-,0.00) 11(CGGCCCGA,-,0.00),173(TCGTCCCG,+,0.00),324(TCGCGCCG,+,0.00) 243(CGGAAGAAACAG,+,0.00) 29(GAGCGACG,-,0.00) -125(ACCGCCCA,+,0.00),91(GCCGCCCA,+,0.00) 7(CAAGCGGCCC,-,0.00),333(AGCCCGGCCC,-,0.00) -30(CTTGTCGG,+,0.00),32(CGACGCGG,+,0.00) 561_WT_peak_7517 chrX 24497883 24498208 + 100 NA intron (NM_001142386, intron 1 of 11) MIRb|SINE|MIR 14701 NM_005391 5165 Hs.296031 NM_005391 HPRD:03956 PDK3 CMTX6|GS1-358P8.4 pyruvate dehydrogenase kinase, isozyme 3 protein-coding 0.021538 0.417178 53(AGCCACAT,-,0.00) 15(CGGGTAAG,+,0.00) 561_WT_peak_5416 chr4 10673019 10673213 + 100 NA intron (NM_052964, intron 1 of 18) intron (NM_052964, intron 1 of 18) 13270 NM_052964 116449 Hs.678910 NM_052964 CLNK MIST cytokine-dependent hematopoietic cell linker protein-coding 0.005155 0.461538 561_WT_peak_5124 chr3 52740144 52740357 + 100 NA promoter-TSS (NM_001278281) promoter-TSS (NM_001278281) -151 NM_018446 55830 Hs.297304 NM_018446 HPRD:12423 GLT8D1 MSTP139 glycosyltransferase 8 domain containing 1 protein-coding 0.084507 0.672897 -160(AGGCCCGGCTAC,+,0.00) -107(CTCGGTCGCC,-,0.00) 42(TCGAAGCC,+,0.00) -106(TCGGTCGC,-,0.00) -94(GCCTCGCAGC,-,0.00),31(GCCTGGCAGC,-,0.00) 561_WT_peak_5524 chr4 83955726 83956222 + 100 NA promoter-TSS (NM_001258006) promoter-TSS (NM_001258006) -265 NM_016129 51138 Hs.190384 NM_016129 HPRD:09888 COPS4 CSN4 COP9 signalosome subunit 4 protein-coding 0.048387 0.509054 -143(CTCGGCTGCC,-,0.00) -98(CCGGCCGA,+,0.00) -101(CGCCCGGC,-,0.00) -105(ACCGCGCC,+,0.00) -147(CCGCCTCG,-,0.00) 561_WT_peak_2172 chr14 35591032 35591994 + 100 NA promoter-TSS (NM_017917) promoter-TSS (NM_017917) 6 NM_017917 55012 Hs.530712 NM_017917 HPRD:12622 PPP2R3C C14orf10|G4-1|G5pr protein phosphatase 2, regulatory subunit B'', gamma protein-coding 0.066528 0.566978 721(CCTCCCTCCTCG,+,0.00) 480(GCCGCCGGGCCA,-,0.00) 414(AGACACTT,-,0.00) -71(GGCGTCGC,-,0.00),-61(GGCGCCGA,-,0.00),478(TCGCCGCC,+,0.00) -111(GGGCTGCCCCTC,-,0.00),533(GGGCTGGCGCGG,-,0.00) 290(CGCGTGCG,+,0.00) 522(TCCGTCGG,-,0.00),526(TCGGTCGG,-,0.00) -130(AGGGCCGGGC,-,0.00) -69(CGTCGCTA,+,0.00) 521(GTCCGTCG,-,0.00),524(CGTCGGTC,+,0.00) 460(CAAAACTG,+,0.00) -22(TCCGCGCA,+,0.00),538(GGCGCGGT,-,0.00) 483(GCCGGGCCAGGC,+,0.00) 579(TGGCCGCGTT,+,0.00),597(GTGCCGCTTT,+,0.00) 45(CCGCCAGGCCCC,-,0.00) 561_WT_peak_986 chr10 46815228 46815542 + 100 NA Intergenic Intergenic -52493 NR_003611 399761 Hs.571994 NM_001040053 ENSG00000204164 BMS1P5 BMS1LP1|BMS1LP5|BMS1P1|bA556L1.3 BMS1 pseudogene 5 pseudo 0.000000 0.380952 561_WT_peak_5558 chr4 99916256 99916485 + 100 NA promoter-TSS (NM_015143) promoter-TSS (NM_015143) -418 NM_015143 23173 Hs.480364 NM_015143 HPRD:10071 METAP1 MAP1A|MetAP1A methionyl aminopeptidase 1 protein-coding 0.056769 0.573913 -43(GGCGGGGG,+,0.00) 561_WT_peak_5717 chr5 42993164 42993804 + 100 NA promoter-TSS (NR_104643) promoter-TSS (NR_104643) -49 NR_104643 643977 Hs.535791 NR_104643 FLJ32255 - uncharacterized LOC643977 ncRNA 0.046875 0.496100 -58(CTCGGCCTCC,-,0.00) 95(GGCGGCGA,-,0.00) 444(TAGAGACG,-,0.00) 452(GGGTTTTG,-,0.00) -62(CCGCCTCG,-,0.00) 89(AGCCCTGGCGGC,-,0.00) 561_WT_peak_3833 chr19 49013846 49014077 + 100 NA intron (NM_001080434, intron 2 of 15) intron (NM_001080434, intron 2 of 15) 2485 NM_001080434 114783 Hs.207426 NM_001080434 ENSG00000142235 LMTK3 LMR3|PPP1R101|TYKLM3 lemur tyrosine kinase 3 protein-coding 0.030303 0.616379 19(AAGTGGTT,+,0.00) -150(AGGGCTGGGC,-,0.00) -88(CGGCACGT,-,0.00) 561_WT_peak_5418 chr4 13485605 13485941 + 100 NA exon (NM_001159601, exon 1 of 8) exon (NM_001159601, exon 1 of 8) 216 NM_004249 9364 Hs.656060 NM_004249 HPRD:06699 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding 0.101190 0.712166 -134(GGAGGAGGCCGG,-,0.00) -31(GTTGCCGGTCCT,-,0.00),112(CGCCCCGGTGTC,+,0.00) -138(GCGGGGAGGAGG,-,0.00),12(CCGGGAACCAGG,-,0.00),65(CCGGGGGCGGGG,-,0.00) -151(GCGACGCC,+,0.00) 23(GCCCGCCCCT,+,0.00) -146(GCCGGGCG,+,0.00),70(GGCGGGGG,+,0.00),108(CCCCCGCC,-,0.00) -48(CAGCACGA,-,0.00),100(CGGCAGGA,-,0.00),131(CGGCAGGA,-,0.00) -3(GTCCGACA,-,0.00) 561_WT_peak_5014 chr3 14220220 14220593 + 100 NA promoter-TSS (NM_004628) promoter-TSS (NM_004628) 178 NM_014463 27258 Hs.111632 NM_014463 LSM3 SMX4|USS2|YLR438C LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) protein-coding 0.048257 0.513369 15(AGGTCGCT,+,0.00) -149(GCGGGAAGCAGG,-,0.00) 77(TCGTGCCT,+,0.00) 96(GTCACCATGGCC,+,0.00) 561_WT_peak_7196 chr9 10067 10287 + 100 NA Intergenic (CCCTAA)n|Simple_repeat|Simple_repeat -1810 NR_051986 100287596 Hs.719844 NR_051986 DDX11L5 - DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 like 5 pseudo 0.000000 0.561086 561_WT_peak_6171 chr6 26328306 26328476 + 100 NA Intergenic tRNA-Arg-CGY_|tRNA|tRNA -36996 NM_001197249 11118 Hs.376046 NM_007047 HPRD:12547 BTN3A2 BT3.2|BTF4|BTN3.2|CD277 butyrophilin, subfamily 3, member A2 protein-coding 0.076471 0.473684 -48(TCGACTCC,+,0.00) -78(CGTCTGAC,+,0.00) 561_WT_peak_956 chr10 38383548 38383772 + 100 NA intron (NM_003421, intron 1 of 6) CpG 396 NM_001007094 7587 Hs.292575 NM_003421 HPRD:18508 ZNF37A KOX21|ZNF37 zinc finger protein 37A protein-coding 0.084821 0.617778 -104(ATGCCCGGAGGC,+,0.00) 9(GGCGTCGC,-,0.00) -51(TGCGCGCT,-,0.00) 10(GCGTCGCCGC,-,0.00) 561_WT_peak_2304 chr14 77428132 77428361 + 100 NA Intergenic Intergenic 66796 NM_024496 64207 Hs.179260 NM_024496 HPRD:10713 IRF2BPL C14orf4|EAP1 interferon regulatory factor 2 binding protein-like protein-coding 0.061135 0.573913 -100(GGGGCCGGAAGC,+,0.00) -81(CGGCCCCAGCCC,+,0.00) -102(GCGGGGCCGGAA,+,0.00),-82(GCGGCCCCAGCC,+,0.00) -90(GCCCCGCTGC,-,0.00) 561_WT_peak_3574 chr19 3035843 3036029 + 100 NA intron (NM_001144761, intron 2 of 19) intron (NM_001144761, intron 2 of 19) -6324 NM_001144762 7089 Hs.332173 NM_003260 HPRD:03025 TLE2 ESG|ESG2|GRG2 transducin-like enhancer of split 2 protein-coding 0.037634 0.566845 -130(GGAGGAGGGGGG,-,0.00) -154(TGGACGCC,+,0.00) 561_WT_peak_1107 chr10 97803329 97803627 + 100 NA intron (NM_019084, intron 1 of 5) CpG 319 NM_019084 54619 Hs.596479 NM_019084 HPRD:07710 CCNJ bA690P14.1 cyclin J protein-coding 0.120805 0.745819 -46(GGGCTGGGGCTG,-,0.00) 3(GCCGGGCG,+,0.00) -144(CGGCGCGA,-,0.00),-59(CCGCACGA,-,0.00) -40(GGGCTGTGAGGG,-,0.00) -64(GTCCGCCG,-,0.00) -19(CGGGTAAG,+,0.00) -148(TGGGCGGC,-,0.00) -145(GCGGCGCGAGCG,+,0.00),-75(GCGGGGCCGGCG,+,0.00),72(GGCTGGCCCGGC,-,0.00) -27(CGCGGTTCCGGG,-,0.00) -31(GGGCCGCGGT,+,0.00) 8(GCGGCCCGGCAG,+,0.00) 561_WT_peak_3965 chr2 11244208 11244565 + 100 NA intron (NR_040080, intron 8 of 8) intron (NR_040080, intron 8 of 8) 27916 NR_040080 285150 Hs.329841 NM_182586 HPRD:08158 FLJ33534 - uncharacterized LOC285150 ncRNA 0.019608 0.500000 -105(TGGTTTTG,-,0.00) 561_WT_peak_1420 chr11 76494480 76494759 + 100 NA promoter-TSS (NR_120561) promoter-TSS (NR_120561) 334 NM_015516 25987 Hs.8361 NM_015516 HPRD:12152 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding 0.111111 0.700000 -10(CCGACCCA,+,0.00),95(GCGGTCGG,-,0.00) -34(AGGGCTGGGC,-,0.00) -93(GCCGGGCG,+,0.00) -33(GGGCTGGGCGGG,-,0.00) -46(CGTCGGAC,+,0.00),-45(GTCGGACG,-,0.00) 13(GGGAGACAAAGG,+,0.00) -82(GGGCGGGGCT,+,0.00) -127(GCCTCGCGGC,-,0.00) 561_WT_peak_3438 chr18 12883701 12884175 + 100 NA intron (NM_001207013, intron 1 of 10) CpG 396 NM_080423 5771 Hs.654527 NM_002828 HPRD:06768 PTPN2 PTN2|PTPT|TC-PTP|TCELLPTP|TCPTP protein tyrosine phosphatase, non-receptor type 2 protein-coding 0.111814 0.673684 168(GGAGGAGGTCGG,-,0.00) 155(GAGTCCGGGTCT,-,0.00) -67(AAGCCGCT,+,0.00) -161(CCGGGGGCGCGC,-,0.00),120(CGGGGGAGGCGG,-,0.00) 94(CCGAGCGA,+,0.00) 118(GGCGGGGG,+,0.00) 149(GGGCACGA,-,0.00) 80(CCGCCACTTCCG,-,0.00) 223(CAGCGACG,-,0.00) -106(GCCGCGCA,+,0.00),74(ACCGCGCC,+,0.00) -111(CCCGGGCCGCGC,-,0.00) 189(CGTGGGTCCGCG,-,0.00) 270(GGGCATGGCTGC,-,0.00) -113(GACCCGGGCCGC,-,0.00) 561_WT_peak_5529 chr4 84138879 84139306 + 99 NA Intergenic Intergenic 66975 NM_015697 27235 Hs.144304 NM_015697 HPRD:13062 COQ2 CL640|COQ10D1|MSA1 coenzyme Q2 4-hydroxybenzoate polyprenyltransferase protein-coding 0.009368 0.439252 -145(TGGTTTTG,-,0.00),6(CTGTTTTG,-,0.00) -134(GGGGTAAA,+,0.00),-96(GTTACCCG,-,0.00) -114(GAAACAGGAAGA,+,0.00) 561_WT_peak_6957 chr8 28918595 28918827 + 99 NA Intergenic Intergenic 170486 NM_024567 79618 Hs.563560 NM_024567 HPRD:07964 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding 0.025862 0.463519 20(CAAAACCA,+,0.00) 561_WT_peak_1731 chr12 57081886 57082107 + 99 NA promoter-TSS (NR_104219) promoter-TSS (NR_104219) 196 NM_001282604 10728 Hs.50425 NM_006601 HPRD:06138 PTGES3 P23|TEBP|cPGES prostaglandin E synthase 3 (cytosolic) protein-coding 0.131222 0.693694 -66(CCGGTCGG,-,0.00) 19(GCCGGGCG,+,0.00) -83(CGGAAAGAGCGG,+,0.00),-60(GGGGAGAAGAGG,+,0.00) -133(GGCGACGGCGGC,-,0.00) 561_WT_peak_5456 chr4 40201605 40202349 + 99 NA intron (NM_001278363, intron 1 of 2) MER5B|DNA|hAT-Charlie 3450 NM_001278363 399 Hs.654594 NM_004310 RHOH ARHH|TTF ras homolog family member H protein-coding 0.010753 0.488591 -28(GGGCTGTGAGAG,-,0.00) 231(CAAAACCA,+,0.00) -63(GCTGGGAGGC,+,0.00) 561_WT_peak_3743 chr19 37263676 37263881 + 99 NA promoter-TSS (NM_001267779) promoter-TSS (NM_001267779) -62 NM_001193552 342892 Hs.406307 NM_001193552 ENSG00000267041 ZNF850 ZNF850P zinc finger protein 850 protein-coding 0.082927 0.601942 -78(GGCGTCGG,-,0.00) -76(CGTCGGCC,+,0.00) -155(GGCGCGGC,-,0.00) -140(AAATCGGCAC,-,0.00) 561_WT_peak_4293 chr2 128848510 128848596 + 99 NA promoter-TSS (NM_020120) promoter-TSS (NM_020120) -201 NM_020120 56886 Hs.743306 NM_020120 HPRD:12064 UGGT1 HUGT1|UGCGL1|UGT1 UDP-glucose glycoprotein glucosyltransferase 1 protein-coding 0.046512 0.528736 -131(GCTTTCGGGTCT,-,0.00) -147(CCGACTGA,+,0.00) 561_WT_peak_4080 chr2 58273696 58274619 + 99 NA intron (NM_001288839, intron 1 of 11) CpG 310 NM_001130481 7444 Hs.715298 NM_006296 HPRD:03702 VRK2 - vaccinia related kinase 2 protein-coding 0.089924 0.672078 -94(GTCTCCGGGGCG,-,0.00),114(CGGCCCGGCGAC,+,0.00),251(GACTCCGGGCCG,-,0.00) -77(AGGCCGCT,+,0.00),-63(AACCGGCT,+,0.00),507(AGGCGGCT,+,0.00) 44(CCGCCTCCCCGC,+,0.00) -86(GGCGTGGA,-,0.00) -112(CCTCTCCTTCCC,-,0.00) 260(CCGTCCCAGCCC,+,0.00) -17(GGCCGACG,-,0.00),231(CGTCGGAG,+,0.00),383(GTCCGACG,-,0.00) 374(CAAAAGCG,+,0.00) 325(TTTCCCCG,-,0.00) 658(AGAAGCCGAAGG,+,0.00) -119(GCCGCGCC,+,0.00) 36(TGCTGGGCCCGC,-,0.00),204(CCGCGGCCCCGC,-,0.00) -45(TGAGGCTCCGCG,-,0.00),112(CGCGGCCCGGCG,-,0.00),197(GCCGGAGCCGCG,+,0.00),205(CGCGGCCCCGCT,-,0.00) 515(GGGCCGCGCT,+,0.00) 77(CCGCCTCG,-,0.00) -55(GCGGCCTGTGTG,+,0.00) 561_WT_peak_3961 chr2 10587948 10588333 + 99 NA promoter-TSS (NM_001287190) promoter-TSS (NM_001287190) -215 NM_001287190 4953 Hs.467701 NM_002539 HPRD:01324 ODC1 ODC ornithine decarboxylase 1 protein-coding 0.127273 0.772021 -31(CGGGCCGGGA,-,0.00) -46(GCCGCGGG,+,0.00) -25(GGGAGGAAGCGG,+,0.00) 57(CCGGGGCCCGGG,+,0.00),63(CCCGGGGCCCGC,-,0.00),144(CCCAGGCGCCGC,-,0.00) -146(CGCGGGGCCGCA,+,0.00) 561_WT_peak_4763 chr21 32505161 32505495 + 99 NA intron (NM_003253, intron 24 of 28) intron (NM_003253, intron 24 of 28) -94533 NM_001099219 728299 Hs.580875 NM_001099219 ENSG00000206102 KRTAP19-8 - keratin associated protein 19-8 protein-coding 0.014970 0.432836 67(CCGACTGA,+,0.00) 561_WT_peak_4361 chr2 170655478 170655781 + 99 NA promoter-TSS (NM_001294145) promoter-TSS (NM_001294145) 91 NM_001294145 6741 Hs.632535 NM_003142 HPRD:00168 SSB LARP3|La|La/SSB Sjogren syndrome antigen B (autoantigen La) protein-coding 0.118812 0.677632 -1(GGCGGCGGAG,+,0.00) 25(GGCGGCGA,-,0.00) 108(TAGAGACG,-,0.00) 4(CGGAGCCGAGGG,+,0.00) 33(GGCTGCCCCCGC,-,0.00) -100(CGCGACTGCGCG,-,0.00),2(GGCGGAGCCGAG,+,0.00) -117(GGTCCGCTTT,+,0.00) 0(GCGGCGGAGC,+,0.00),26(GCGGCGAGGC,+,0.00) 26(GCGGCGAGGCTG,+,0.00) 561_WT_peak_5804 chr5 71616206 71616392 + 99 NA promoter-TSS (NM_001286751) promoter-TSS (NM_001286751) 105 NM_001284404 79810 Hs.126906 NM_024754 HPRD:15193 PTCD2 - pentatricopeptide repeat domain 2 protein-coding 0.053763 0.604278 -6(AGGGGAGGGA,-,0.00) -13(GGGAAGGAGGGG,+,0.00) 561_WT_peak_1996 chr13 37574971 37575236 + 99 NA intron (NM_181503, intron 1 of 10) CpG 425 NM_181503 11340 Hs.294041 NM_181503 HPRD:09351 EXOSC8 CIP3|EAP2|OIP2|RRP43|Rrp43p|bA421P11.3|p9 exosome component 8 protein-coding 0.064151 0.586466 -157(CGGGTAGA,+,0.00) 561_WT_peak_4732 chr20 62886674 62886947 + 99 NA promoter-TSS (NM_001104925) promoter-TSS (NM_001104925) -238 NM_018257 55251 Hs.744845 NM_018257 HPRD:12764 PCMTD2 C20orf36 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 protein-coding 0.102564 0.755474 -5(AGGCGTCT,+,0.00) -77(CAGCGCCGGCCC,+,0.00) -141(CGTCCGCG,-,0.00),66(CGCGGACG,+,0.00) -88(CCGCCCGA,+,0.00) -127(GGCGGGGG,+,0.00) 64(TGCGCGGA,-,0.00) -74(CGCCGGCCCCGA,-,0.00),65(GCGCGGACGGCG,+,0.00) -119(TCCCAGGGCGGC,-,0.00) -97(GCTGGGAGGC,+,0.00) 47(CCGTCCTGGCTG,+,0.00) 561_WT_peak_3977 chr2 20101637 20102128 + 99 NA promoter-TSS (NM_001008237) promoter-TSS (NM_001008237) -138 NM_001008237 130502 Hs.591547 NM_001008237 HPRD:17296 TTC32 - tetratricopeptide repeat domain 32 protein-coding 0.065173 0.540650 -116(AGCCACTT,-,0.00),301(AAACGCTT,-,0.00) 181(CGGTTCTG,-,0.00) 561_WT_peak_3530 chr18 72045500 72045696 + 99 NA Intergenic Intergenic 62488 NM_001174123 644041 Hs.465414 NM_001174123 ENSG00000206043 C18orf63 DKFZP781G0119 chromosome 18 open reading frame 63 protein-coding 0.010204 0.482234 -52(AGCCACAT,-,0.00) -135(CAAAACAG,+,0.00) 561_WT_peak_6644 chr7 38272543 38272762 + 99 NA Intergenic Intergenic 40596 NM_001003806 445347 Hs.534032 NM_001003799 TARP CD3G|TCRG|TCRGC1|TCRGC2 TCR gamma alternate reading frame protein protein-coding 0.013699 0.431818 -27(GGGCCGGTTT,+,0.00) 561_WT_peak_464 chr1 147774740 147775005 + 99 NA intron (NR_102404, intron 17 of 18).2 tRNA-His-CAY_|tRNA|tRNA 31806 NR_049810 100847044 NR_049810 MIR5087 - microRNA 5087 ncRNA 0.079245 0.545113 -54(TGACTCGGATTC,+,0.00) 28(CCGCGATGGCGG,-,0.00) -100(GGGAGCAAAAGG,+,0.00) 27(GCCGCGATGGCG,+,0.00) 561_WT_peak_5557 chr4 99850006 99850563 + 99 NA promoter-TSS (NM_001130678) promoter-TSS (NM_001130678) -41 NM_001130678 1977 Hs.249718 NM_001968 EIF4E AUTS19|CBP|EIF4E1|EIF4EL1|EIF4F eukaryotic translation initiation factor 4E protein-coding 0.080790 0.600358 247(AGAGGCTT,-,0.00) -12(CCGGGAACGCCG,-,0.00) -42(GGGAAGGGGCGG,+,0.00) 370(CGGCGGAC,+,0.00) 112(CACAACCG,+,0.00) 54(GGGGGCCAAAGG,+,0.00) 354(TGCGCGGT,-,0.00) -104(CCGCCTCG,-,0.00) -105(GCCGCCTCGGCC,+,0.00),203(GGCCCTGGCGGC,-,0.00) 561_WT_peak_930 chr10 28822561 28822875 + 99 NA intron (NM_100486, intron 1 of 12) CpG 297 NM_100486 51322 Hs.743224 NM_016628 HPRD:18291 WAC BM-016|PRO1741|Wwp4 WW domain containing adaptor with coiled-coil protein-coding 0.136943 0.749206 5(GGGCCCGGCTTC,+,0.00) -34(GCGGGCGGGCGG,-,0.00),-30(GCGGGCGGGCGG,-,0.00),9(CCGGCTTCGCGG,+,0.00),138(CTTCCTCCCCGG,+,0.00) 95(TCGGTAGG,-,0.00) -156(CGGGCCGGGC,-,0.00) -153(GCCGGGCG,+,0.00),-143(GGCGGGGG,+,0.00),-130(GGCGGGGG,+,0.00),121(GGCGGGGG,+,0.00) -157(TCGGGCCG,+,0.00),58(TTGTGCCG,+,0.00) 28(CCCTCTCCGGCC,+,0.00) 53(CGGGTTTG,-,0.00) 8(CCCGGCTTCGCG,-,0.00),74(CGGGGCTCGGCG,-,0.00) 126(GGGCCCCGTT,+,0.00) 13(CTTCGCGG,+,0.00) 12(GCTTCGCGGC,-,0.00) 4(GGGGCCCGGCTT,+,0.00) 561_WT_peak_5488 chr4 54232349 54232629 + 99 NA promoter-TSS (NM_152540) promoter-TSS (NM_152540) -247 NM_152540 152579 Hs.302287 NM_152540 HPRD:15300 SCFD2 STXBP1L1 sec1 family domain containing 2 protein-coding 0.035714 0.412811 32(AGCCACCT,-,0.00) -96(TCGCTCGG,-,0.00) -98(CGTCGCTC,+,0.00) -92(TCGGCCTGTCTG,+,0.00) 561_WT_peak_5697 chr5 39177156 39177447 + 99 NA intron (NM_001243093, intron 2 of 18) intron (NM_001243093, intron 2 of 18) 42379 NM_199335 2533 Hs.370503 NM_001465 HPRD:04107 FYB ADAP|PRO0823|SLAP-130 FYN binding protein protein-coding 0.006873 0.434932 -18(AGACACCT,-,0.00) 561_WT_peak_4778 chr21 35320011 35320365 + 99 NA intron (NR_038883, intron 2 of 2) intron (NR_038883, intron 2 of 2) -1042 NM_001288961 400863 Hs.729814 NM_207472 LOC400863 - uncharactered LOC400863 protein-coding 0.016949 0.476056 169(AGCCGATT,-,0.00) -160(GGCGTGGA,-,0.00) 111(GGGCCGGGGCTG,-,0.00) 110(AGGGCCGGGG,-,0.00) -7(CAGTTTTG,-,0.00) -138(TTTACCTG,-,0.00) 561_WT_peak_5449 chr4 39355109 39355291 + 99 NA intron (NM_002913, intron 1 of 24) intron (NM_002913, intron 1 of 24) 12801 NM_001204747 5981 Hs.507475 NM_002913 HPRD:00024 RFC1 A1|MHCBFB|PO-GA|RECC1|RFC|RFC140 replication factor C (activator 1) 1, 145kDa protein-coding 0.000000 0.366120 561_WT_peak_5349 chr3 186545067 186545290 + 99 NA Intergenic CpG -1868 NR_125409 102724699 Hs.518476 NR_125409 LOC102724699 - uncharacterized LOC102724699 ncRNA 0.121076 0.781250 -135(GGCGCCCGAG,+,0.00) -123(CCTCCACCCCGG,+,0.00),-87(CCGGCTCCCCGG,+,0.00),34(CCGCCTCCCGGG,+,0.00) 43(GGGAGCCCGAGG,+,0.00) -140(GGCGCGGC,-,0.00) -137(GCGGCGCCCGAG,+,0.00) -88(CCCGGCTCCCCG,-,0.00) 0(GGCCGCGGCGGC,-,0.00),26(GCCCAGGGCCGC,-,0.00) 561_WT_peak_4746 chr21 15906357 15906626 + 99 NA intron (NM_001286523, intron 1 of 8) intron (NM_001286523, intron 1 of 8) 12190 NM_001286523 64092 Hs.473341 NM_022136 HPRD:06413 SAMSN1 HACS1|NASH1|SASH2|SH3D6B|SLy2 SAM domain, SH3 domain and nuclear localization signals 1 protein-coding 0.007435 0.333333 561_WT_peak_5890 chr5 126112209 126112583 + 99 NA promoter-TSS (NM_001198557) promoter-TSS (NM_001198557) 81 NM_005573 4001 Hs.89497 NM_005573 HPRD:01036 LMNB1 ADLD|LMN|LMN2|LMNB lamin B1 protein-coding 0.088235 0.653333 84(GCTCCTTCCCGC,+,0.00) 8(TAGGGACG,-,0.00) -130(CCTCGGAC,+,0.00) 48(TGGGCGGT,-,0.00) 128(CGCGGGGCGGCG,+,0.00),153(CCCAGAGCCGCG,+,0.00) 561_WT_peak_4178 chr2 86426574 86426879 + 99 NA intron (NM_016622, intron 1 of 3) intron (NM_016622, intron 1 of 3) 170 NM_016622 51318 Hs.433439 NM_016622 HPRD:14755 MRPL35 L35mt|MRP-L35 mitochondrial ribosomal protein L35 protein-coding 0.055738 0.552288 -71(AGCGACAT,-,0.00) 68(GACCGGCAGCCC,+,0.00) -141(CGTAGGCG,-,0.00) -152(AAAGCGGCCG,-,0.00) 92(CCGACTCG,-,0.00),93(CGACTCGG,+,0.00) 561_WT_peak_3313 chr17 64188432 64188703 + 99 NA promoter-TSS (NM_001199165) promoter-TSS (NM_001199165) -355 NM_001199165 201134 Hs.408676 NM_145036 HPRD:11336 CEP112 CCDC46|MACOCO centrosomal protein 112kDa protein-coding 0.051661 0.569853 -41(AGTCGCTT,-,0.00) -50(CCCGCGCA,+,0.00) -120(CTTGGCGG,+,0.00) 561_WT_peak_3375 chr17 78428230 78428753 + 99 NA Intergenic CpG 21913 NM_002522 4884 Hs.514556 NM_002522 HPRD:03843 NPTX1 NP1 neuronal pentraxin I protein-coding 0.139579 0.736641 -48(TCCGCCTCCTCC,+,0.00) -4(AGCCGCTT,-,0.00),186(AGACGCCT,-,0.00) -29(CGGCGTCCCCGG,+,0.00),270(CCGCGTTCCCGG,+,0.00) 40(TCGCGCCAGCCC,+,0.00) 267(CGTCCGCG,-,0.00) -96(CCGGCCGA,+,0.00) 140(CCCGCGGC,-,0.00) 132(CGTCGGCC,+,0.00) 131(CCGTCGGCCCCC,-,0.00) 278(CCGGAGCCAGCG,+,0.00) 203(CGCCTCTCCGCG,-,0.00),211(CGCGGTTCCGCC,-,0.00),288(CGCGGCGGCGCG,+,0.00),288(CGCGGCGGCGCG,-,0.00) -91(CGAGGCGG,+,0.00),165(CCGCGAAG,-,0.00) -135(GGTGCGAGGC,+,0.00),289(GCGGCGGCGC,+,0.00) -110(GCGGCCTGACGG,+,0.00),46(CAGCCCGGCCGG,-,0.00),309(GGGGCTTGGCCG,+,0.00) 561_WT_peak_3705 chr19 24184391 24184732 + 99 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA -31646 NM_001278661 9534 Hs.434406 NM_004876 HPRD:05304 ZNF254 BMZF-5|HD-ZNF1|ZNF539|ZNF91L zinc finger protein 254 protein-coding 0.026393 0.479532 561_WT_peak_6527 chr6 157342305 157342625 + 99 NA intron (NM_020732, intron 5 of 19) CpG -241600 NR_039676 100616154 NR_039676 miRBase:MI0016817 MIR4466 - microRNA 4466 ncRNA 0.109375 0.691589 70(GGATGAGGGCGG,-,0.00) -148(CTTTCCGGTCCT,-,0.00) 77(GGCGGCGA,-,0.00) -49(CGGAAGAAGCCG,+,0.00) -90(CCCCGGCCCCGC,-,0.00),129(GGCAGGCCCCGC,-,0.00) -89(CCCGGCCCCGCG,-,0.00),52(CGCGGAGGCGCT,+,0.00) 34(GGGCGGAATT,+,0.00) 110(CAGCCCGGCGGC,-,0.00),127(CCGGCAGGCCCC,-,0.00) 561_WT_peak_181 chr1 36689455 36689673 + 99 NA promoter-TSS (NM_005119) promoter-TSS (NM_005119) -453 NM_005119 9967 Hs.744057 NM_005119 HPRD:07543 THRAP3 TRAP150 thyroid hormone receptor associated protein 3 protein-coding 0.036697 0.515982 561_WT_peak_4380 chr2 178417178 178417542 + 99 NA exon (NM_152517, exon 1 of 1) exon (NM_152517, exon 1 of 1) 164 NM_152517 150737 Hs.447659 NM_152517 TTC30B IFT70|fleer tetratricopeptide repeat domain 30B protein-coding 0.090659 0.663014 -48(CTCGGCCGCC,-,0.00) 12(GGCGCGGC,-,0.00) -71(AGCTGGCCCAGC,-,0.00) 14(CGCGGCTCCTAG,-,0.00) 59(CCGCCTCG,-,0.00) 27(GCTCCGCTGC,-,0.00) 561_WT_peak_1444 chr11 85887723 85887955 + 99 NA Intergenic MIRc|SINE|MIR -67967 NM_152991 8726 Hs.503510 NM_003797 HPRD:09343 EED HEED|WAIT1 embryonic ectoderm development protein-coding 0.004310 0.510730 -146(GGTGGAGGGTGG,-,0.00) 28(AGCCACAT,-,0.00) 561_WT_peak_2761 chr16 29086283 29086493 + 98 NA non-coding (NR_003369, exon 1 of 17) non-coding (NR_003369, exon 1 of 17) 225 NR_003369 653390 Hs.720348 NR_003369 ENSG00000103472 RRN3P2 - RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2 pseudo 0.090476 0.654028 5(AGGCCGCT,+,0.00) -19(CGCGTCGA,-,0.00) -62(CGGGAGATGCGG,+,0.00) -97(CCCAATGGCGGC,-,0.00) 561_WT_peak_1435 chr11 82904826 82905168 + 98 NA non-coding (NR_125355, exon 1 of 6) non-coding (NR_125355, exon 1 of 6) 216 NR_125355 338699 Hs.503438 NM_182603 HPRD:08230 ANKRD42 PPP1R79|SARP ankyrin repeat domain 42 protein-coding 0.090643 0.609329 -42(GGCGCCGA,-,0.00) 59(CGGCTTCTCCCG,-,0.00) -138(CGCCGCTA,+,0.00),-19(TAGCGACG,-,0.00),116(CGTCTCTA,+,0.00) -10(CGGGGAAA,+,0.00) 561_WT_peak_7187 chr8 145149846 145150195 + 98 NA promoter-TSS (NM_001916) promoter-TSS (NM_001916) 82 NM_001916 1537 Hs.289271 NM_001916 HPRD:00480 CYC1 MC3DN6|UQCR4 cytochrome c-1 protein-coding 0.157593 0.788571 -20(GGAGGAGGCCAA,-,0.00),141(CCGGCCTCCGCG,+,0.00) -31(GGCGGCCGCG,+,0.00) -92(CCGCGCTCCCCG,+,0.00),59(GCGCGTGCCCGG,+,0.00) -59(TCGTGGCG,+,0.00) -44(GGCCGACG,-,0.00) -71(AGGTTTTG,-,0.00) -155(CCGGGACCAGCG,+,0.00),-105(GCCCGGCCCCGC,-,0.00),37(GCGGGGCGCGGG,+,0.00) 151(CGCGGCCCCGCA,-,0.00) -106(AGCCCGGCCC,-,0.00) 14(CTTCGCGG,+,0.00) 561_WT_peak_1397 chr11 68228223 68228402 + 98 NA intron (NM_001164161, intron 1 of 23) CpG 126 NM_018312 55291 Hs.503022 NM_018312 HPRD:10703 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6, regulatory subunit 3 protein-coding 0.128492 0.744444 -33(GGGCAGGCGCGG,-,0.00) -117(TAGCGGCG,-,0.00) 561_WT_peak_1639 chr12 29533871 29534196 + 98 NA intron (NM_016570, intron 1 of 13) intron (NM_016570, intron 1 of 13) 110 NM_016570 51290 Hs.339453 NM_016570 ERGIC2 Erv41|PTX1|cd002 ERGIC and golgi 2 protein-coding 0.067692 0.549080 -139(AGCGGCTT,-,0.00),101(AAGCGACT,+,0.00),102(AGCGACTA,-,0.00) 73(CGCGTACC,+,0.00),75(CGTACCCG,-,0.00) -129(CCGTCCGA,+,0.00),-125(CCGACCGG,+,0.00) -128(CGTCCGAC,+,0.00),-127(GTCCGACC,-,0.00) 98(CAAAAGCG,+,0.00) -100(AAGACAGGAAGC,+,0.00) 561_WT_peak_5200 chr3 110957841 110958092 + 98 NA Intergenic MIRc|SINE|MIR 166951 NM_001243288 25945 Hs.293917 NM_015480 PVRL3 CD113|CDW113|NECTIN-3|PPR3|PRR3|PVRR3 poliovirus receptor-related 3 protein-coding 0.000000 0.404762 561_WT_peak_250 chr1 54665894 54666126 + 98 NA promoter-TSS (NM_001031672) promoter-TSS (NM_001031672) 170 NM_016491 51253 Hs.584908 NM_016491 HPRD:14757 MRPL37 L37mt|MRP-L2|MRP-L37|MRPL2|RPML2 mitochondrial ribosomal protein L37 protein-coding 0.090517 0.678112 -132(GCGTCCGGGCCC,-,0.00) -123(CCCGCAAGGCGG,-,0.00),-15(CCTCCTCCCCTG,+,0.00) 55(TCGTGCCC,+,0.00) -106(AGCTGGCTCCGG,-,0.00) -66(CCGAGACG,-,0.00) -87(GGCCTTGGGGGC,-,0.00) 57(GTGCCCTGGCTG,+,0.00) 561_WT_peak_5843 chr5 85913683 85914042 + 98 NA promoter-TSS (NM_001867) promoter-TSS (NM_001867) 78 NM_001867 1350 Hs.430075 NM_001867 COX7C - cytochrome c oxidase subunit VIIc protein-coding 0.061281 0.586111 74(AGCCACTA,-,0.00) -113(GGCTCCGCCC,-,0.00) 162(CTGCAAGGCCGC,-,0.00) 561_WT_peak_1116 chr10 102027056 102027263 + 98 NA intron (NM_018294, intron 1 of 13) CpG 278 NM_018294 55280 Hs.215502 NM_018294 HPRD:13101 CWF19L1 - CWF19-like 1, cell cycle control (S. pombe) protein-coding 0.053140 0.610577 -146(GGAGGAGGCCTA,-,0.00) -113(CCGAACGA,+,0.00) -104(CGTCGCCA,+,0.00) -24(GCTCCCCAGC,-,0.00) 561_WT_peak_6028 chr5 175322643 175322865 + 98 NA Intergenic Intergenic 24253 NM_001008220 10814 Hs.193235 NM_006650 HPRD:09234 CPLX2 921-L|CPX-2|CPX2|Hfb1 complexin 2 protein-coding 0.009009 0.488789 -89(TGGTTTTG,-,0.00) 561_WT_peak_3355 chr17 74511567 74511804 + 98 NA Intergenic Intergenic -11983 NR_033357 768206 Hs.634380 NM_001077620 PRCD RP36 progressive rod-cone degeneration protein-coding 0.033755 0.508403 -150(GCCGGGCG,+,0.00) 561_WT_peak_6438 chr6 111804558 111805023 + 98 NA non-coding (NR_034111, exon 1 of 4) non-coding (NR_034111, exon 1 of 4) 115 NR_034108 643749 Hs.486228 NR_034108 ENSG00000231889 TRAF3IP2-AS1 C6UAS|C6orf3|NCRNA00248|TRAF3IP2-AS2 TRAF3IP2 antisense RNA 1 ncRNA 0.126882 0.723176 -40(GGCGGCGGAG,+,0.00) 35(TGGCGGCT,+,0.00) -150(CCCCCTCCCCGG,+,0.00),-142(CCGGGCACGCGG,-,0.00),2(GCGGGAGGGGGG,-,0.00),222(GCGGGCGGGCGG,-,0.00) -82(CGGCTGGCGGGC,-,0.00) 84(CCGACCGC,+,0.00) 113(GGCGGGGG,+,0.00) 191(TCGTGCCG,+,0.00) -47(CGGAAGGGGCGG,+,0.00) -14(GGGCTCCGAGGG,-,0.00) 29(CCGTTTTG,-,0.00),133(CGGTTTTT,-,0.00) -52(GGCAGCGGAAGG,+,0.00) 114(GCGGGGGCAGCC,+,0.00),242(GCGGGGCCGGGT,+,0.00) 285(CGCGGCTCCGCG,+,0.00),285(CGCGGCTCCGCG,-,0.00) 26(GGGCCGTTTT,+,0.00),153(AAATCCGCCC,-,0.00) -39(GCGGCGGAGC,+,0.00),60(GCTGCGATGC,+,0.00) 201(GCGGCCTCGCGG,+,0.00) 561_WT_peak_3431 chr18 9475224 9475428 + 98 NA promoter-TSS (NM_006788) promoter-TSS (NM_006788) -204 NM_006788 10928 Hs.528993 NM_006788 HPRD:09013 RALBP1 RIP1|RLIP1|RLIP76 ralA binding protein 1 protein-coding 0.098039 0.692683 -49(AGAGGCCT,-,0.00) -31(TGGACGCC,+,0.00) -90(GGCGCGGT,-,0.00) -6(GCCTCCCAGC,-,0.00) -41(TCGGGCTGGCTG,+,0.00) 561_WT_peak_2175 chr14 35873729 35874202 + 98 NA promoter-TSS (NM_020529) promoter-TSS (NM_020529) -5 NM_020529 4792 Hs.81328 NM_020529 HPRD:01235 NFKBIA IKBA|MAD-3|NFKBI nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha protein-coding 0.095137 0.664557 -60(CTCGGCCGCC,-,0.00) -143(AGGCCGCT,+,0.00),-117(TAGCCGCT,+,0.00),247(AGCCACTA,-,0.00) 38(GCGGGACGGCGG,-,0.00) -40(CGCGGACG,+,0.00) -3(GCCGCGGG,+,0.00) -134(TCGTGGCG,+,0.00),47(CGGCACGG,-,0.00) 6(TGCGCGCT,-,0.00) 119(GCGGGGTCAGGC,+,0.00) -9(CGCTGGGCCGCG,+,0.00) 117(GGGCGGGGTC,+,0.00) -133(CGTGGCGG,+,0.00),-97(CGTCGCGG,+,0.00) -86(CCCTCCATGGCC,+,0.00) 65(GCTCTGCAGC,-,0.00),73(GCGCCGCCGC,-,0.00) 561_WT_peak_1373 chr11 65686761 65686950 + 98 NA promoter-TSS (NM_001135635) promoter-TSS (NM_001135635) 127 NM_006442 10589 Hs.356742 NM_006442 HPRD:03796 DRAP1 NC2-alpha DR1-associated protein 1 (negative cofactor 2 alpha) protein-coding 0.148148 0.784211 -17(AGGCCCGGGAGC,+,0.00) -14(CCCGGGAGCCGG,-,0.00) -27(GGCGGCGA,-,0.00) -17(AGGCCCGGGA,-,0.00) -77(GGCGGGGG,+,0.00) -60(CGGCACCA,-,0.00) -101(CGGCGCTA,+,0.00) -72(GGGCGGAGCGGG,-,0.00) -70(GCGGAGCGGGCG,+,0.00) -39(CCGCGACG,-,0.00) 8(GCGGCGGCGC,+,0.00) 561_WT_peak_7222 chr9 19184203 19184436 + 98 NA Intergenic Intergenic -46444 NR_073201 55667 Hs.249591 NM_017925 HPRD:12927 DENND4C C9orf55|C9orf55B|bA513M16.3 DENN/MADD domain containing 4C protein-coding 0.008584 0.491453 8(CTGGTAAA,+,0.00) 561_WT_peak_3828 chr19 48825020 48825514 + 98 NA Intergenic CpG -1935 NM_144577 93233 Hs.112645 NM_144577 HPRD:08149 CCDC114 CILD20 coiled-coil domain containing 114 protein-coding 0.091093 0.658586 9(CTTGGCCGCC,-,0.00) -20(AACGGCTT,-,0.00),4(AAACGCTT,-,0.00),246(AGCGGCCT,-,0.00) -11(CCGGGAAGCAGC,-,0.00),164(GGGCCTCCCCGG,+,0.00),172(CCGGGCGGGCGG,-,0.00) -94(GGTGTCGA,-,0.00),-90(TCGAAGCC,+,0.00) 24(CGTCCGCG,-,0.00),253(TGCGTACG,+,0.00),255(CGTACGCT,-,0.00) 239(GGGAGGAAGCGG,+,0.00) 1(CAAAAACG,+,0.00) -76(TGCGCGGA,-,0.00) 8(GCTTGGCCGC,-,0.00) 561_WT_peak_7389 chr9 112736663 112736841 + 98 NA intron (NM_007203, intron 6 of 10) intron (NM_007203, intron 6 of 10) -74126 NM_001004065 11217 Hs.591908 NM_001004065 ENSG00000241978 AKAP2 AKAP-2|AKAPKL|PRKA2 A kinase (PRKA) anchor protein 2 protein-coding 0.005618 0.446927 561_WT_peak_1064 chr10 76969527 76969782 + 98 NA promoter-TSS (NM_003375) promoter-TSS (NM_003375) -258 NM_001184823 7417 Hs.355927 NM_003375 HPRD:01904 VDAC2 POR voltage-dependent anion channel 2 protein-coding 0.031373 0.519531 561_WT_peak_6160 chr6 26249785 26250895 + 98 NA TTS (NM_021018) TTS (NM_021018) 495 NM_021018 8968 Hs.247814 NM_021018 HPRD:11910 HIST1H3F H3/i|H3FI histone cluster 1, H3f protein-coding 0.050450 0.524752 223(CCGCCCTCCTCG,+,0.00) 266(AGCCGCCA,-,0.00),807(AGCCGCCT,-,0.00) 540(GGCGTGGA,-,0.00) 788(TGGCTGGCGCGC,-,0.00) 721(TAGCGGCG,-,0.00) -56(TGGTTTTG,-,0.00),-28(CTGTTTTG,-,0.00),142(TGGTTTTG,-,0.00),641(CGGTCTTG,-,0.00),797(CGCTTTTG,-,0.00) 230(CCTCGGGCTCCC,-,0.00) 830(TGCGCGGG,-,0.00) 589(GCCTCGCAGG,-,0.00),838(GCTTTGCCGC,-,0.00) 561_WT_peak_1033 chr10 70939536 70939727 + 98 NA promoter-TSS (NM_003171) promoter-TSS (NM_003171) -362 NM_003171 6832 Hs.106469 NM_003171 HPRD:05493 SUPV3L1 SUV3 suppressor of var1, 3-like 1 (S. cerevisiae) protein-coding 0.036649 0.453125 561_WT_peak_5606 chr4 143328234 143328694 + 98 NA intron (NM_001101669, intron 5 of 25) intron (NM_001101669, intron 5 of 25) 439140 NM_003866 8821 Hs.531403 NM_003866 HPRD:06322 INPP4B - inositol polyphosphate-4-phosphatase, type II, 105kDa protein-coding 0.006522 0.370933 561_WT_peak_3515 chr18 57567289 57567739 + 98 NA intron (NM_021127, intron 1 of 1) CpG 322 NM_021127 5366 Hs.96 NM_021127 HPRD:12002 PMAIP1 APR|NOXA phorbol-12-myristate-13-acetate-induced protein 1 protein-coding 0.095556 0.689579 66(GGGGTCGA,-,0.00) 213(CGGGTACG,+,0.00),222(CGGGTACG,+,0.00) 47(GCCGGGCG,+,0.00) -114(GTCCGAGG,-,0.00) 244(CGGATTTG,-,0.00) -64(TGGGCGGC,-,0.00) 26(CTGGGGCCAGCG,+,0.00),52(GCGGGGTCGGGG,+,0.00),58(TCGGGGCCGGGG,+,0.00) 50(GGGCGGGGTC,+,0.00) 561_WT_peak_2592 chr15 89182036 89182423 + 98 NA 5' UTR (NM_002201, exon 1 of 4) 5' UTR (NM_002201, exon 1 of 4) 190 NM_002201 3669 Hs.459265 NM_002201 ISG20 CD25|HEM45 interferon stimulated exonuclease gene 20kDa protein-coding 0.046512 0.662371 151(GGGCCTTCCCGG,+,0.00) -11(AGGGTCGGGA,-,0.00) -128(GACTCGGCCC,-,0.00) 170(GCTGCGGGGC,+,0.00) 561_WT_peak_5092 chr3 47822678 47822951 + 98 NA intron (NM_003074, intron 1 of 27) intron (NM_003074, intron 1 of 27) 591 NM_003074 6599 Hs.476179 NM_003074 HPRD:03435 SMARCC1 BAF155|CRACC1|Rsc8|SRG3|SWI3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 protein-coding 0.058608 0.572993 -22(TAGTGGCT,+,0.00) 79(CCGGGATCGCGG,-,0.00) 69(CAGTCAGGCCCC,-,0.00) 561_WT_peak_3857 chr19 50003859 50004076 + 98 NA TTS (NM_001015) TTS (NM_001015) 158 NR_029703 406942 NR_029703 miRBase:MI0000479 MIR150 MIRN150|miRNA150 microRNA 150 ncRNA 0.046083 0.669725 -73(AGACGCAT,-,0.00) -89(GGGACCCGAAGG,+,0.00) 0(GGGGCCTGCCGG,+,0.00) 561_WT_peak_1048 chr10 75173429 75173754 + 98 NA intron (NM_001156, intron 1 of 12) CpG 250 NM_004034 310 Hs.631827 NM_001156 HPRD:01720 ANXA7 ANX7|SNX|SYNEXIN annexin A7 protein-coding 0.098462 0.723926 44(CCGCCATCCGGG,+,0.00) 41(TCGCCGCC,+,0.00) -92(AGGGCGGGGC,-,0.00) 75(GCCGCGCC,+,0.00) 36(CCGAGTCG,-,0.00) -37(AAGCCAGGCCGG,-,0.00),-33(CAGGCCGGCCGC,-,0.00),73(CAGCCGCGCCCC,-,0.00) 561_WT_peak_1327 chr11 63302424 63302604 + 98 NA intron (NR_049833, intron 1 of 3) intron (NR_049833, intron 1 of 3) -1759 NM_004585 5920 Hs.17466 NM_004585 HPRD:05479 RARRES3 HRASLS4|HRSL4|PLA1/2-3|RIG1|TIG3 retinoic acid receptor responder (tazarotene induced) 3 protein-coding 0.005556 0.408840 561_WT_peak_5623 chr4 153457566 153458069 + 98 NA TTS (NR_039658) TTS (NR_039658) 237 NR_039658 100616193 NR_039658 miRBase:MI0016799 MIR4453 - microRNA 4453 ncRNA 0.049702 0.565476 -88(GGAGGAGGCCCA,-,0.00) 106(TCGGGCCG,+,0.00) 561_WT_peak_6488 chr6 137355107 137355349 + 98 NA intron (NM_014432, intron 1 of 6) intron (NM_014432, intron 1 of 6) 10221 NM_001278722 53832 Hs.445868 NM_014432 HPRD:05729 IL20RA CRF2-8|IL-20R-alpha|IL-20R1|IL-20RA interleukin 20 receptor, alpha protein-coding 0.008264 0.456790 24(CAAAACCC,+,0.00) 561_WT_peak_6172 chr6 26330441 26330740 + 98 NA Intergenic tRNA-Met-i|tRNA|tRNA -34797 NM_001197249 11118 Hs.376046 NM_007047 HPRD:12547 BTN3A2 BT3.2|BTF4|BTN3.2|CD277 butyrophilin, subfamily 3, member A2 protein-coding 0.033445 0.446667 561_WT_peak_564 chr1 156698299 156698567 + 98 NA promoter-TSS (NM_030980) promoter-TSS (NM_030980) 170 NM_001142560 51093 Hs.512597 NM_015997 HPRD:10824 RRNAD1 C1orf66|CGI-41 ribosomal RNA adenine dimethylase domain containing 1 protein-coding 0.111940 0.698885 -64(GGAGGAGGGGGC,-,0.00) -70(GGCGGCGGAG,+,0.00) -40(GGCGGGGG,+,0.00) 52(CGCCGGAC,+,0.00) -54(GCGGCGTGGGTG,+,0.00) 561_WT_peak_1860 chr12 112123985 112124229 + 98 NA promoter-TSS (NM_006768) promoter-TSS (NM_006768) 250 NM_001136538 80724 Hs.331141 NM_025247 HPRD:10625 ACAD10 - acyl-CoA dehydrogenase family, member 10 protein-coding 0.053279 0.534694 -161(AGAGGCCT,-,0.00) -21(TGGTTTTG,-,0.00) -120(CCCTGGCTCCGC,-,0.00) -119(CCTGGCTCCGCG,-,0.00) 561_WT_peak_6661 chr7 44835779 44836081 + 98 NA promoter-TSS (NM_001300981) promoter-TSS (NM_001300981) -305 NM_021130 5478 Hs.356331 NM_021130 HPRD:00457 PPIA CYPA|CYPH|HEL-S-69p peptidylprolyl isomerase A (cyclophilin A) protein-coding 0.145695 0.735974 20(CGCGTGCG,+,0.00),22(CGTGCGCG,-,0.00) -87(CGGCGCGA,-,0.00) 121(CCGCGACG,-,0.00) 561_WT_peak_7310 chr9 77767346 77767608 + 98 NA Intergenic Intergenic 64079 NM_012383 26578 Hs.494192 NM_012383 HPRD:17808 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding 0.019084 0.509506 561_WT_peak_1505 chr11 118965699 118966138 + 98 NA exon (NM_002105, exon 1 of 1) exon (NM_002105, exon 1 of 1) 259 NM_002105 3014 Hs.477879 NM_002105 HPRD:03465 H2AFX H2A.X|H2A/X|H2AX H2A histone family, member X protein-coding 0.118451 0.697727 -156(CCGCCCGA,+,0.00) -5(GGCGGGGG,+,0.00) -161(TCTTGCCG,+,0.00),223(TCTTGCCG,+,0.00),231(CGGCCCGA,-,0.00) 244(TAGCGAGG,-,0.00) -143(CCTTCGGCCCCA,-,0.00) -58(GCCGCCCA,+,0.00) 28(GGGCCGCATT,+,0.00) 197(GGCCTTGGCGCG,-,0.00) 561_WT_peak_3344 chr17 73775113 73775878 + 97 NA intron (NM_005324, intron 1 of 3) CpG-11127 365 NM_005324 3021 Hs.180877 NM_005324 HPRD:03036 H3F3B H3.3B H3 histone, family 3B (H3.3B) protein-coding 0.115033 0.695822 134(CCAACCTCCTCC,+,0.00) 245(CTGCCCGGAACC,+,0.00) -100(TGGCGGCT,+,0.00) 88(CCGCCTCCCCGC,+,0.00),179(CAGCCTCCCCCG,+,0.00),187(CCCGGGAGGGGG,-,0.00),188(CCGGGAGGGGGA,-,0.00),241(CCGACTGCCCGG,+,0.00) 258(GGCGTCGG,-,0.00),351(CCGACGCC,+,0.00) 173(GAGCGGCAGCCT,+,0.00) -162(CCGCCCGA,+,0.00),-158(CCGACCTA,+,0.00),488(CCGACCGC,+,0.00) 332(TCCCGGCCCC,+,0.00) 373(CCCCCGCC,-,0.00),434(GCCGCGGG,+,0.00) 361(CGGCCCGA,-,0.00) -146(TAGCGATG,-,0.00) 43(GGGCTGCGGGGG,-,0.00) 566(CCAAACCG,+,0.00) 283(CGGGAAAA,+,0.00),438(CGGGTAAA,+,0.00) 380(CGCTCGGCTCCC,-,0.00) 494(GCCGCGCC,+,0.00),550(ACCGCCCA,+,0.00) 406(GCGGCGCCAACG,+,0.00) 591(CCGCGTCG,-,0.00) 45(GCTGCGGGGG,+,0.00) 25(CACCCGGGCCGC,-,0.00) 561_WT_peak_3784 chr19 43943708 43943892 + 97 NA Intergenic Intergenic 24765 NM_001130011 83639 Hs.97978 NM_031451 HPRD:15490 TEX101 CT131|GTPR867|NYD-SP8|PRO1884|SGRG|SPATA44|TES101RP testis expressed 101 protein-coding 0.021739 0.524324 -55(CAAAACCG,+,0.00),-40(TGGTTTTG,-,0.00) 561_WT_peak_6430 chr6 109702928 109703705 + 97 NA intron (NM_001142404, intron 1 of 5) CpG 446 NM_001142402 8763 Hs.520313 NM_006016 HPRD:04523 CD164 MGC-24|MUC-24|endolyn CD164 molecule, sialomucin protein-coding 0.113256 0.706941 229(GAACCCGGGCCC,-,0.00) -59(GCGACGCC,+,0.00),184(TCGCCGCC,+,0.00),353(GGCGCCGA,-,0.00) 75(GGGCCCCAGCCC,+,0.00) 105(CGCGTCCG,+,0.00) 212(CCGCCCGA,+,0.00),216(CCGACCGT,+,0.00) -55(CGCCCGGC,-,0.00) 316(TGGTGCCG,+,0.00) 110(CCGCTTCCCCCC,-,0.00) 594(AGCGCGCA,+,0.00) -30(CGCTGCCCCCGC,-,0.00),232(CCCGGGCCCCGC,-,0.00) -88(AGCTCGGCCC,-,0.00),200(AGCGCGGCCC,-,0.00) 166(GCCGCCATGTTG,+,0.00) 83(GCCCCGCAGC,-,0.00),581(GCTCCCCCGC,-,0.00) 159(CAGGCTGGCCGC,-,0.00),203(GCGGCCCGCCCG,+,0.00),264(GCGGCTCGGCTG,+,0.00) 561_WT_peak_7484 chr9 139377274 139377510 + 97 NA promoter-TSS (NM_152571) promoter-TSS (NM_152571) 115 NM_014866 9919 Hs.522500 NM_014866 ENSG00000148396 SEC16A KIAA0310|SEC16L|p250 SEC16 homolog A (S. cerevisiae) protein-coding 0.135593 0.767932 -105(CCGGCCTCCGCC,+,0.00),-98(CCGCCTTCCTCC,+,0.00) 25(CTCAGCCGCC,-,0.00) -155(AGCCGCCT,-,0.00),19(AGACACCT,-,0.00) 7(GGCGACGA,-,0.00) -20(GCCGCGGG,+,0.00) 6(TGGCGACG,-,0.00) -120(GCCTGGCTCCGC,-,0.00) 59(CGGGTCTCCGCG,-,0.00) -123(ACGGCCTGGCTC,+,0.00) 561_WT_peak_2055 chr13 50699846 50700258 + 97 NA promoter-TSS (NR_002612) promoter-TSS (NR_002612) -375 NR_002612 8847 Hs.547964 NR_002612 DLEU2 1B4|BCMSUN|DLB2|LEU2|LINC00022|MIR15AHG|NCRNA00022|RFP2OS|TRIM13OS deleted in lymphocytic leukemia 2 (non-protein coding) ncRNA 0.133495 0.755448 112(GTCTCCGGCTCC,-,0.00),155(GCATTCGGGCCT,-,0.00) -34(AGCGGCCT,-,0.00) 128(TCGCCGCC,+,0.00) -53(TCGTGGCG,+,0.00),-10(TCGGGCCG,+,0.00) -155(CCGCTTCTTCCC,-,0.00) -144(CCCTCCCAGCCG,+,0.00) -96(CGGGAAAA,+,0.00) 113(TCTCCGGCTCCC,-,0.00) -48(GCGGCGGCGGCG,+,0.00),-42(GCGGCGGCAGCG,+,0.00),54(CTCGGGCTCCGC,-,0.00) -79(CGGGGCTCCGCG,-,0.00),170(CTCGGAGCCGGG,+,0.00) -52(CGTGGCGG,+,0.00) 79(GCTGCGGGGC,+,0.00) 561_WT_peak_6691 chr7 66309450 66309805 + 97 NA intron (NR_003934, intron 1 of 10) CpG 186 NR_003934 729156 Hs.709878 NR_003934 ENSG00000230583 GTF2IRD1P1 - GTF2I repeat domain containing 1 pseusogene 1 pseudo 0.081690 0.685393 74(AACCGCTT,-,0.00) -106(GCCGGGCG,+,0.00),-99(GGCGGGGG,+,0.00) 146(TCGCGCCG,+,0.00) 561_WT_peak_1425-2 chr11 78036539 78036762 + 97 NA intron (NM_080491, intron 1 of 9) L3|LINE|CR1 16276 NM_012296 9846 Hs.429434 NM_012296 HPRD:05866 GAB2 - GRB2-associated binding protein 2 protein-coding 0.013453 0.415179 -149(CAACACCG,+,0.00) 561_WT_peak_6727 chr7 75508253 75508515 + 97 NA promoter-TSS (NM_001040456) promoter-TSS (NM_001040456) 67 NM_001040457 57414 Hs.488827 NM_020684 HPRD:11492 RHBDD2 NPD007|RHBDL7 rhomboid domain containing 2 protein-coding 0.103053 0.714829 -83(CGAGGAGGCGGA,-,0.00) -63(AGGACCGGCAGC,+,0.00),74(GTTTCCGGGCCT,-,0.00) -50(GGCGTCGA,-,0.00) -75(CGGAAGGAGCAG,+,0.00) -41(GCGGGGCGCGGG,+,0.00) -45(CGAGGCGG,+,0.00) -22(GCGGCCATGGCG,+,0.00),-20(GGCCATGGCGGC,-,0.00) -5(GGGGCCCGGGTG,+,0.00) 561_WT_peak_3042 chr17 8286307 8286666 + 97 NA promoter-TSS (NM_000987) promoter-TSS (NM_000987) 79 NM_000987 6154 Hs.482144 NM_000987 HPRD:04746 RPL26 DBA11|L26 ribosomal protein L26 protein-coding 0.072423 0.563889 52(GCTTCCGGTTCT,-,0.00) -96(CTCGGCCGAC,-,0.00) 171(TAGTGGCT,+,0.00) -66(GCGGTCGG,-,0.00) 57(CGGTTCTG,-,0.00) -1(CTTACCCG,-,0.00) -99(CTACTCGG,+,0.00),-91(CCGACAAG,-,0.00) -56(GCCACCATGCCC,+,0.00) 561_WT_peak_4705 chr20 56884883 56885058 + 97 NA promoter-TSS (NR_003505) promoter-TSS (NR_003505) 199 NM_020673 57403 Hs.529044 NM_020673 HPRD:06696 RAB22A - RAB22A, member RAS oncogene family protein-coding 0.114286 0.761364 -25(GCTCCCGGGCCA,-,0.00) -142(AGCCGCCT,-,0.00) -149(GGGCGGCAGCCG,+,0.00) -133(TGCGCGGA,-,0.00) -110(GCGGCGGCAGCG,+,0.00),-101(GCGGCGCCAGGG,+,0.00) -20(CGGGCCATGGCG,+,0.00),-18(GGCCATGGCGCT,-,0.00) 561_WT_peak_7079 chr8 99057454 99057712 + 97 NA exon (NM_000989, exon 2 of 5) exon (NM_000989, exon 2 of 5) 235 NM_000989 6156 Hs.400295 NM_000989 HPRD:01595 RPL30 L30 ribosomal protein L30 protein-coding 0.054264 0.606178 -71(TCTTCCGGGCCT,-,0.00) -106(CCCGCCCTGGCC,+,0.00) 561_WT_peak_216 chr1 45279483 45279746 + 97 NA 3' UTR (NM_001136537, exon 8 of 8) 3' UTR (NM_001136537, exon 8 of 8) 5460 NM_001136537 149478 Hs.632400 NM_001136537 ENSG00000222009 BTBD19 - BTB (POZ) domain containing 19 protein-coding 0.087452 0.666667 72(TCTACGCC,+,0.00) 8(GGGCTGGGCCTC,-,0.00) -9(CGGGCCGGGC,-,0.00) -86(GCCGGGCG,+,0.00) -10(TCGGGCCG,+,0.00) 561_WT_peak_2786 chr16 30645384 30645734 + 97 NA Intergenic Intergenic -16682 NM_024031 78994 Hs.293629 NM_024031 HPRD:14541 PRR14 - proline rich 14 protein-coding 0.051429 0.541311 14(GCGACGCC,+,0.00) 12(TGGCGACG,-,0.00) 561_WT_peak_3324 chr17 66287274 66287500 + 97 NA promoter-TSS (NM_001174166) promoter-TSS (NM_001174166) 18 NM_004694 9120 Hs.42645 NM_004694 HPRD:04857 SLC16A6 MCT6|MCT7 solute carrier family 16, member 6 protein-coding 0.106195 0.735683 16(CCCGGCCGCC,-,0.00) -139(AAGCCGCT,+,0.00) 9(CCCCCACCCCGG,+,0.00) 2(CCCCCGCC,-,0.00) -25(CGACTCGG,+,0.00) 13(CACCCCGGCCGC,-,0.00) 561_WT_peak_6175 chr6 26520682 26520963 + 97 NA Intergenic Intergenic -1112 NR_026790 493812 Hs.272939 NR_026790 ENSG00000228223 HCG11 bK14H9.3 HLA complex group 11 (non-protein coding) ncRNA 0.028470 0.471631 -104(CCGACAGA,+,0.00) 561_WT_peak_6572 chr7 2001548 2001854 + 97 NA intron (NM_001013836, intron 15 of 18) THE1A|LTR|ERVL-MaLR -117812 NR_039799 100616160 NR_039799 MIR4655 - microRNA 4655 ncRNA 0.032680 0.508143 561_WT_peak_6889 chr7 148823190 148823650 + 97 NA promoter-TSS (NM_020781) promoter-TSS (NM_020781) 18 NM_001001661 155054 Hs.31743 NM_001001661 HPRD:11715 ZNF425 - zinc finger protein 425 protein-coding 0.104348 0.722343 -65(GAAGCCGGCTCG,-,0.00) -161(CCCGGCCGCC,-,0.00) 95(AAGCCGCT,+,0.00) 54(GCCGGGCG,+,0.00) -41(CCGCACGA,-,0.00) 127(CGGGAGGAGCGG,+,0.00) 220(CCTTGGACTCCC,-,0.00),270(GGGAGCTGACGG,+,0.00) 58(GGCGCGGT,-,0.00) -35(GAACCGGCCC,-,0.00) -56(TCGGCCATGGCG,+,0.00),-54(GGCCATGGCGGT,-,0.00) 561_WT_peak_6629 chr7 26904486 26904686 + 97 NA promoter-TSS (NM_003930) promoter-TSS (NM_003930) -245 NM_003930 8935 Hs.200770 NM_003930 HPRD:05558 SKAP2 PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R src kinase associated phosphoprotein 2 protein-coding 0.040000 0.437811 561_WT_peak_424 chr1 143765798 143766046 + 97 NA Intergenic MLT1N2|LTR|ERVL-MaLR 1959 NM_001123068 644591 Hs.534674 NM_001123068 ENSG00000236334 PPIAL4G COAS-2 peptidylprolyl isomerase A (cyclophilin A)-like 4G protein-coding 0.008065 0.489960 561_WT_peak_6705 chr7 72425233 72425446 + 97 NA promoter-TSS (NR_033323) promoter-TSS (NR_033323) -37 NR_033323 260294 Hs.510927 NM_148936 HPRD:15657 NSUN5P2 NOL1R2|NSUN5C|WBSCR20B|WBSCR20C NOP2/Sun domain family, member 5 pseudogene 2 pseudo 0.107981 0.705607 -93(CCCCCGCC,-,0.00) 17(GTGCGACG,-,0.00) -98(CTCTGCCCCCGC,-,0.00) 561_WT_peak_2424 chr15 35837986 35838228 + 97 NA promoter-TSS (NR_038251) promoter-TSS (NR_038251) -289 NR_038251 100507466 Hs.536420 NR_038251 ENSG00000248079 DPH6-AS1 ATPBD4-AS1 DPH6 antisense RNA 1 (head to head) ncRNA 0.078512 0.609053 4(CGGGCCGGCAAC,+,0.00) -115(GGCGTCGG,-,0.00) -24(GCGCGCCAGCCA,+,0.00) 26(CCGCCTCTTCCT,-,0.00) -113(CGTCGGTA,+,0.00) 45(GGAGGAGCCGCG,+,0.00) 561_WT_peak_543 chr1 154909841 154910263 + 97 NA promoter-TSS (NM_006556) promoter-TSS (NM_006556) -568 NM_006556 10654 Hs.30954 NM_006556 HPRD:07404 PMVK HUMPMKI|PMK|PMKA|PMKASE phosphomevalonate kinase protein-coding 0.035545 0.501182 -108(GCCTCCGGCCCA,-,0.00) -153(CCCTTTAAGCCC,+,0.00) 54(CGGTTCTG,-,0.00) 561_WT_peak_1018 chr10 69372765 69373037 + 97 NA intron (NM_001291133, intron 3 of 8) intron (NM_001291133, intron 3 of 8) 52542 NM_001127384 29119 Hs.21375 NM_013266 HPRD:09639 CTNNA3 ARVD13|VR22 catenin (cadherin-associated protein), alpha 3 protein-coding 0.007353 0.443223 14(TCCCTCCCCT,+,0.00) 20(CCCTCACAGCTC,+,0.00) 561_WT_peak_1425 chr11 78036279 78036453 + 97 NA intron (NM_080491, intron 1 of 9) MER117|DNA|hAT-Charlie 16560 NM_012296 9846 Hs.429434 NM_012296 HPRD:05866 GAB2 - GRB2-associated binding protein 2 protein-coding 0.000000 0.445714 561_WT_peak_3697 chr19 19932139 19932591 + 97 NA intron (NM_001145404, intron 1 of 2) intron (NM_001145404, intron 1 of 2) 195 NM_001145404 440515 Hs.351906 NM_001099269 ZNF506 - zinc finger protein 506 protein-coding 0.048673 0.626932 -64(AGCCGCCA,-,0.00),40(AGCCACTT,-,0.00) 5(CCGGGAGGCCTG,-,0.00) -130(TCCACGCC,+,0.00) 265(CAAAGCCG,+,0.00) -111(ACTGCGCA,+,0.00) -45(GGGCGGAGCT,+,0.00) 133(GCGTCCTAGCTG,+,0.00) 561_WT_peak_5723 chr5 43041818 43041953 + 97 NA promoter-TSS (NR_015447) promoter-TSS (NR_015447) -351 NR_015447 153684 Hs.259625 NR_015447 HPRD:14101 LOC153684 - uncharacterized LOC153684 ncRNA 0.029630 0.507353 561_WT_peak_6237 chr6 28367305 28367750 + 97 NA promoter-TSS (NM_001163391) promoter-TSS (NM_001163391) 17 NR_028077 9753 Hs.134816 NM_014724 ZSCAN12 ZFP96|ZNF29K1|ZNF305|ZNF96|dJ29K1.2 zinc finger and SCAN domain containing 12 protein-coding 0.074157 0.627803 34(GGACCCGGAACC,+,0.00) 14(AGAGGCCT,-,0.00) 17(GGCCTCGA,-,0.00) 213(CTGGTAAA,+,0.00),247(TTTACCCA,-,0.00) -36(CCTGCGGCCCCC,-,0.00),136(GGGAGCGAAAGG,+,0.00) -122(CCGGCCAGGGCC,+,0.00),-30(GCCCCCAGGGCC,+,0.00) 561_WT_peak_5746 chr5 53906335 53906645 + 97 NA Intergenic Intergenic 92662 NR_104659 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA 0.006452 0.427653 561_WT_peak_6974 chr8 37593871 37594456 + 97 NA promoter-TSS (NM_007175) promoter-TSS (NM_007175) -34 NM_001003790 11160 Hs.705490 NM_007175 HPRD:15437 ERLIN2 C8orf2|Erlin-2|NET32|SPFH2|SPG18 ER lipid raft associated 2 protein-coding 0.111111 0.696246 -117(CCGCCCTCATCC,+,0.00) 72(CGGCCCGGAAGG,+,0.00) 357(GAGCCGCAGCCC,+,0.00) 132(CGAGTACG,+,0.00),161(GGTACGCG,-,0.00),182(CGTGCGCG,-,0.00) -62(CCGACCAA,+,0.00) 24(GGCGGGGG,+,0.00),170(CCCCCGCC,-,0.00) -152(TCCTGCCG,+,0.00) 66(AAGCGACG,-,0.00) -122(CAACACCG,+,0.00),-85(CAAGACCG,+,0.00),107(CGGTTTTC,-,0.00) 324(GCGAGCCGCAGG,+,0.00) 20(GCGGGGCGGGGG,+,0.00),165(CGCGGCCCCCGC,-,0.00) -121(AACACCGCCC,-,0.00),163(TACGCGGCCC,-,0.00) 268(CAGCCGGCCCGC,-,0.00) 561_WT_peak_4800 chr21 40555926 40556021 + 97 NA promoter-TSS (NM_003720) promoter-TSS (NM_003720) -533 NM_001261824 8624 Hs.473838 NM_003720 HPRD:05598 PSMG1 C21LRP|DSCR2|LRPC21|PAC-1|PAC1 proteasome (prosome, macropain) assembly chaperone 1 protein-coding 0.063158 0.552083 -80(GGCGCGGT,-,0.00) 561_WT_peak_1761 chr12 69753511 69753912 + 97 NA 5' UTR (NM_006530, exon 1 of 7) 5' UTR (NM_006530, exon 1 of 7) 221 NM_006530 8089 Hs.4029 NM_006530 HPRD:03666 YEATS4 4930573H17Rik|B230215M10Rik|GAS41|NUBI-1|YAF9 YEATS domain containing 4 protein-coding 0.107232 0.676617 -50(TCGCCCTCCTTC,+,0.00) 23(CCCCGCCAGCCC,+,0.00),155(GGGGTGGCTCTC,-,0.00) 57(CGGCTTCTTCCG,-,0.00) 67(CGTGGGAC,+,0.00) -129(TGCGCGGG,-,0.00),184(TGCGCGGC,-,0.00) -23(GCCTGGGCCCGC,-,0.00) 167(CCGCCTCG,-,0.00) 561_WT_peak_6157 chr6 26224326 26224823 + 97 NA promoter-TSS (NM_003532) promoter-TSS (NM_003532) -809 NM_003532 8353 Hs.443021 NM_003532 HPRD:11907 HIST1H3E H3.1|H3/d|H3FD histone cluster 1, H3e protein-coding 0.024145 0.379518 177(TCGCCGCC,+,0.00) 294(CAAACCCG,+,0.00) 561_WT_peak_6397 chr6 90984257 90984368 + 97 NA intron (NM_021813, intron 1 of 8) intron (NM_021813, intron 1 of 8) 22315 NM_021813 60468 Hs.269764 NM_021813 HPRD:12012 BACH2 BTBD25 BTB and CNC homology 1, basic leucine zipper transcription factor 2 protein-coding 0.018018 0.589286 561_WT_peak_7391 chr9 114245424 114245612 + 97 NA intron (NM_001080398, intron 3 of 50) CpG 1507 NM_001080398 23392 Hs.368255 NM_001080398 ENSG00000136813 KIAA0368 ECM29 KIAA0368 protein-coding 0.106383 0.740741 -81(GACCCCGGGCCA,-,0.00) -52(AGGTGGCT,+,0.00) -147(CCGTCACCCCGG,+,0.00),-130(CGGCCCTCCCGC,+,0.00) -78(CCCGGGCCAGGG,+,0.00) -48(GGCTCCGCCC,-,0.00) -74(GGCCAGGGCGGA,-,0.00) 561_WT_peak_227 chr1 46768588 46769074 + 97 NA promoter-TSS (NM_001297566) promoter-TSS (NM_001297566) 207 NM_006369 10489 Hs.144941 NM_006369 HPRD:10102 LRRC41 MUF1 leucine rich repeat containing 41 protein-coding 0.096708 0.691992 -8(CTGGGCCGCC,-,0.00),228(CTCGGGCGCC,-,0.00) -45(CGGGCCTCCCGG,+,0.00),-24(CCGCGCCCCCCG,+,0.00),83(CCGCCCGCCCGC,+,0.00),152(CCGCCTCCCGGG,+,0.00) 217(GCGCGCCAGGCC,+,0.00),252(GTGCGCGAGCCC,+,0.00) -18(CCCCCGGC,-,0.00),108(GGCGGGGG,+,0.00) 186(CGCCGCTA,+,0.00) 109(GCGGGGGGAGCG,+,0.00),144(CGCTGGCGCCGC,-,0.00),228(CTCGGGCGCCGC,-,0.00) 169(GCCTCCATGGTC,+,0.00) 561_WT_peak_475 chr1 148598717 148598974 + 97 NA intron (NR_104217, intron 2 of 17) CpG 37998 NM_173638 284565 Hs.523572 NM_173638 HPRD:14710 NBPF15 AB14|AG3|NBPF16 neuroblastoma breakpoint family, member 15 protein-coding 0.062257 0.631783 -114(AGTCGCTT,-,0.00) -42(AGGGCAGGGA,-,0.00) -159(TCGCGCCG,+,0.00) -126(CCCTCCCTGCCC,+,0.00) -111(CGCTTTTG,-,0.00) -98(GCTGCGGAGC,+,0.00) 561_WT_peak_2558 chr15 75660493 75660925 + 97 NA intron (NM_006715, intron 1 of 25) CpG-8102 259 NM_001256496 4123 Hs.26232 NM_006715 HPRD:01109 MAN2C1 MAN6A8|MANA|MANA1 mannosidase, alpha, class 2C, member 1 protein-coding 0.087963 0.706697 23(ACCCCCTCCTCC,+,0.00) 259(AGCCGCCA,-,0.00) 27(CCTCCTCCCCGG,+,0.00) 132(GCGGTCGG,-,0.00),136(TCGGCCGG,-,0.00) 50(CCCGCGGC,-,0.00),69(CCCGCGGC,-,0.00) 202(CGACACGA,-,0.00) -114(CGTGGGAC,+,0.00) -5(GGCCGCTCCGCG,-,0.00) -23(CCGCCAAG,-,0.00) -1(GCTCCGCGGC,-,0.00),143(GCTGCGGGGG,+,0.00) -12(GCTGCCTGGCCG,+,0.00),-11(CTGCCTGGCCGC,-,0.00),72(GCGGCCCGGGTG,+,0.00) 561_WT_peak_4845 chr22 21336116 21336379 + 97 NA promoter-TSS (NM_006767) promoter-TSS (NM_006767) -311 NM_006767 8216 Hs.78788 NM_006767 HPRD:08992 LZTR1 BTBD29|LZTR-1|SWNTS2 leucine-zipper-like transcription regulator 1 protein-coding 0.095057 0.708333 -93(AGCCGCCT,-,0.00),-81(AGGCCGCT,+,0.00) 23(GCCGCGGG,+,0.00) 72(TCGCGACG,-,0.00),84(TAGGGACG,-,0.00) -126(GGGCTGAGGGCG,-,0.00),36(GGGCTGCGTGGG,-,0.00) -76(GCTGCGAGCC,+,0.00) 561_WT_peak_572 chr1 159796318 159796615 + 97 NA promoter-TSS (NM_020125) promoter-TSS (NM_020125) -13 NM_020125 56833 Hs.438683 NM_020125 HPRD:09429 SLAMF8 BLAME|CD353|SBBI42 SLAM family member 8 protein-coding 0.010101 0.500000 -78(ATGTGGCT,+,0.00) 561_WT_peak_6885 chr7 148680720 148680943 + 97 NA Intergenic Intergenic 44951 NM_004911 9601 Hs.93659 NM_004911 HPRD:06501 PDIA4 ERP70|ERP72|ERp-72 protein disulfide isomerase family A, member 4 protein-coding 0.022422 0.419643 561_WT_peak_1889 chr12 121530577 121530845 + 97 NA Intergenic LTR12C|LTR|ERV1 -39911 NR_033953 5027 Hs.729169 NM_002562 HPRD:03977 P2RX7 P2X7 purinergic receptor P2X, ligand-gated ion channel, 7 protein-coding 0.029851 0.490706 561_WT_peak_2743 chr16 25060493 25060908 + 97 NA Intergenic AluSz6|SINE|Alu 17638 NR_038379 554206 Hs.552959 NR_038379 LOC554206 - leucine carboxyl methyltransferase 1 pseudogene pseudo 0.019277 0.425481 -49(AGGCACGA,-,0.00) -123(CGTCTCTA,+,0.00) -64(CTACTCGG,+,0.00) 561_WT_peak_1151 chr10 116301062 116301284 + 96 NA intron (NM_001003407, intron 6 of 21) intron (NM_001003407, intron 6 of 21) -14488 NM_006720 3983 Hs.438236 NM_002313 HPRD:03819 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding 0.009009 0.408072 -67(CAAAACCC,+,0.00) 561_WT_peak_2920 chr16 80613973 80614493 + 96 NA Intergenic Intergenic -7528 NR_104666 101928276 Hs.149769 NR_104665 ENSG00000260737 LINC01227 - long intergenic non-protein coding RNA 1227 ncRNA 0.015385 0.518234 -28(TTGACGCC,+,0.00) 35(ACATCCTGTTTC,-,0.00) 561_WT_peak_383 chr1 112146576 112146865 + 96 NA intron (NR_034126, intron 3 of 4) intron (NR_034126, intron 3 of 4) 4220 NR_034126 100129269 Hs.689728 NR_034126 LINC01160 - long intergenic non-protein coding RNA 1160 ncRNA 0.010381 0.489655 -11(CGGAGGAAGTGG,+,0.00) 561_WT_peak_347 chr1 104068478 104068941 + 96 NA promoter-TSS (NM_001286997) promoter-TSS (NM_001286997) 131 NM_017619 55599 Hs.632423 NM_017619 HPRD:15267 RNPC3 RBM40|RNP|SNRNP65 RNA-binding region (RNP1, RRM) containing 3 protein-coding 0.073434 0.571121 67(AGCCGCTT,-,0.00) 124(GCGACCGA,+,0.00) -3(CGATTTTG,-,0.00) 109(TTTCCCCG,-,0.00) -156(ACCGCGCC,+,0.00) 106(CGCTTTCCCCGC,-,0.00) -44(CGAGGCGG,+,0.00),114(CCGCCTCG,-,0.00) 561_WT_peak_3436 chr18 11908482 11908808 + 96 NA non-coding (NR_040242, exon 1 of 13) non-coding (NR_040242, exon 1 of 13) 151 NM_001242904 65258 Hs.712666 NM_023075 HPRD:14734 MPPE1 PGAP5 metallophosphoesterase 1 protein-coding 0.110429 0.703364 -137(GCTCCCGGGTCT,-,0.00) -47(CTCGGCGGCC,-,0.00),-44(GGCGGCCGCG,+,0.00) 59(CGGGGGACGCGG,-,0.00) -34(TCCCGGCCCC,+,0.00) 57(GGCGGGGG,+,0.00) 95(GAGCTGCGAGGG,-,0.00) -132(CGGGTCTCCGCG,-,0.00) -15(CCGCGAAG,-,0.00) 97(GCTGCGAGGG,+,0.00) -152(GGGGCCCGGCGG,+,0.00) 561_WT_peak_6292 chr6 33151199 33151452 + 96 NA intron (NM_080679, intron 5 of 62).2 intron (NM_080679, intron 5 of 62).2 8920 NM_080680 1302 Hs.390171 NM_080679 HPRD:00376 COL11A2 DFNA13|DFNB53|FBCG2|HKE5|PARP|STL3 collagen, type XI, alpha 2 protein-coding 0.003953 0.413386 -39(AAGTGGCT,+,0.00) -90(TCGAGGCC,+,0.00) 561_WT_peak_2167 chr14 35008675 35009315 + 96 NA promoter-TSS (NM_018453) promoter-TSS (NM_018453) -52 NM_018453 55837 Hs.433269 NM_018453 HPRD:12631 EAPP BM036|C14orf11 E2F-associated phosphoprotein protein-coding 0.078125 0.613105 -17(GAAGCCGGTTCA,-,0.00) -15(AGCCGGTT,-,0.00),6(AGCGGCCT,-,0.00) -124(GGCCTCGA,-,0.00) -40(CGCGTAGG,+,0.00) 126(CAGACCGA,+,0.00) 389(CGCCCGGC,-,0.00) 162(GGGAAGGGGCGG,+,0.00) -59(CGTCGCTA,+,0.00),414(TAGAGACG,-,0.00) -73(CAAAGCCG,+,0.00) 314(CCTCCGCCTCCC,-,0.00) 120(CCCGCGCA,+,0.00) 69(AAAGCGCCCC,-,0.00),206(GGGCGGGTCT,+,0.00) -41(CCGCGTAG,-,0.00),356(CCGAGTAG,-,0.00) -130(AAGCCAGGCCTC,-,0.00) 561_WT_peak_2668 chr16 3202827 3203065 + 96 NA Intergenic tRNA-Arg-AGG|tRNA|tRNA 17812 NM_001134655 7760 Hs.115284 NM_004220 HPRD:12224 ZNF213 CR53|ZKSCAN21|ZSCAN53 zinc finger protein 213 protein-coding 0.054622 0.543933 -23(GGGGTAAA,+,0.00) 561_WT_peak_77 chr1 16767165 16767596 + 96 NA intron (NM_018090, intron 1 of 7) CpG 213 NM_001145278 55707 Hs.437385 NM_018090 HPRD:07674 NECAP2 - NECAP endocytosis associated 2 protein-coding 0.090487 0.638889 -70(GGAGGAGAGCGG,-,0.00) -81(GGCGTCGC,-,0.00),204(TCGACGCA,+,0.00) -61(CGGGTACG,+,0.00) -131(TCCGTCGG,-,0.00),-94(TCGGTGGG,-,0.00) 143(CTGCTTCTTCCA,-,0.00) -79(CGTCGCGA,+,0.00),9(CGTGGCTA,+,0.00) -132(GTCCGTCG,-,0.00),-129(CGTCGGAC,+,0.00),202(GTTCGACG,-,0.00) 113(CAGTTTTG,-,0.00) 226(GCGGGGAGGGCG,+,0.00) -55(CGAGTCGG,+,0.00) 561_WT_peak_4605 chr20 32951098 32951427 + 96 NA intron (NM_001257138, intron 1 of 23) CpG 221 NM_031483 83737 Hs.632272 NM_031483 ENSG00000078747 ITCH AIF4|AIP4|NAPP1|dJ468O1.1 itchy E3 ubiquitin protein ligase protein-coding 0.100304 0.693939 29(AGAGCCGGTGTC,+,0.00) -127(TCGCCGCC,+,0.00) 39(TCTGTCGG,-,0.00) 74(CGGGCCGGGC,-,0.00) 77(GCCGGGCG,+,0.00) -109(CCGGTAAA,+,0.00) 144(CCTTCGCCTCGC,-,0.00) 2(CCCAGAGCCGCG,+,0.00) 561_WT_peak_468 chr1 147931136 147931434 + 96 NA intron (NR_102404, intron 17 of 18).2 CpG 24134 NM_001135789 653598 Hs.534674 NM_001135789 ENSG00000198161 PPIAL4C COAS-2 peptidylprolyl isomerase A (cyclophilin A)-like 4C protein-coding 0.100671 0.695652 22(CCCGGCCGCC,-,0.00),77(CTCTGCCGCC,-,0.00) -23(TCGGCGCC,+,0.00) -18(GCCGGGCG,+,0.00) 32(GCCGCTCAGCCC,+,0.00) -72(TGGAGCCGAAGG,+,0.00) 127(CTACGCGG,+,0.00) 561_WT_peak_160 chr1 33264606 33264925 + 96 NA intron (NM_003680, intron 4 of 12) L2c|LINE|L2 -18278 NM_001256121 64766 Hs.440880 NM_022753 HPRD:07803 S100PBP S100PBPR S100P binding protein protein-coding 0.003135 0.390625 -52(TGGTTTTG,-,0.00) 561_WT_peak_7373 chr9 101984617 101984779 + 96 NA promoter-TSS (NM_033087) promoter-TSS (NM_033087) 128 NM_006808 10952 Hs.191887 NM_006808 HPRD:06715 SEC61B - Sec61 beta subunit protein-coding 0.043210 0.625767 561_WT_peak_7080 chr8 100025272 100025665 + 96 NA promoter-TSS (NM_015243) promoter-TSS (NM_015243) -26 NM_181661 157680 Hs.191540 NM_015243 HPRD:06379 VPS13B CHS1|COH1 vacuolar protein sorting 13 homolog B (yeast) protein-coding 0.066158 0.626904 -21(AAATCCGGTCCG,-,0.00) -134(AGACACCT,-,0.00) 83(GGCGGGGG,+,0.00) 140(GTGAGCCGAGGG,+,0.00) 58(GGCGCGGT,-,0.00) 561_WT_peak_533 chr1 153606591 153606781 + 96 NA promoter-TSS (NM_001024210) promoter-TSS (NM_001024210) -118 NM_001024210 6284 Hs.516505 NM_005979 HPRD:03586 S100A13 - S100 calcium binding protein A13 protein-coding 0.094737 0.633508 -72(CGCTTACG,+,0.00) -9(TCGGCCGG,-,0.00) -54(ACCGCCCA,+,0.00) -119(CCGACTAG,-,0.00) 2(CCGGCCCGCCTG,+,0.00) 561_WT_peak_1883 chr12 120906981 120907349 + 96 NA promoter-TSS (NM_001037494) promoter-TSS (NM_001037494) 393 NM_003769 8683 Hs.706889 NM_003769 HPRD:09053 SRSF9 SFRS9|SRp30c serine/arginine-rich splicing factor 9 protein-coding 0.097826 0.669377 21(CAGGGAAGGCGG,-,0.00) 189(CGCGCACG,+,0.00) 197(TCGGTCGG,-,0.00) -99(GCCCGGGCCT,+,0.00) -29(GGCGGGGG,+,0.00),-13(GCCGGGGG,+,0.00),28(GGCGGGGG,+,0.00) -113(CGGCGCGA,-,0.00),109(GGGCACGA,-,0.00),119(CCGTGCCG,+,0.00) 195(CGTCGGTC,+,0.00) -37(TGCGCGGA,-,0.00) -35(CGCGGAGGCGGG,+,0.00) 561_WT_peak_7400 chr9 117147596 117147948 + 96 NA intron (NM_030767, intron 1 of 21) intron (NM_030767, intron 1 of 21) 8913 NM_030767 80709 Hs.494895 NM_030767 HPRD:16148 AKNA - AT-hook transcription factor protein-coding 0.011364 0.543909 -16(AAGCCTCT,+,0.00) 4(GCCGGGGG,+,0.00) 19(CGGTTTTT,-,0.00) 561_WT_peak_7316 chr9 82239063 82239282 + 96 NA intron (NM_001282749, intron 5 of 18) intron (NM_001282749, intron 5 of 18) 52484 NR_104239 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|ESG|ESG4|GRG4 transducin-like enhancer of split 4 protein-coding 0.009132 0.418182 -36(TCTTCCTGTTTG,-,0.00) 561_WT_peak_2290 chr14 75230059 75230355 + 96 NA exon (NM_019589, exon 1 of 21) exon (NM_019589, exon 1 of 21) 138 NM_019589 56252 Hs.531111 NM_019589 ENSG00000119596 YLPM1 C14orf170|PPP1R169|ZAP113|ZAP3 YLP motif containing 1 protein-coding 0.148649 0.713805 99(GCCCCCTCCTCC,+,0.00) 3(AGCCACTA,-,0.00) -13(CCGGTATGGCGG,-,0.00),103(CCTCCTCCTCGG,+,0.00) -105(TCGCCGCC,+,0.00),84(TCGACGAC,+,0.00) 93(CCCGCGGC,-,0.00) -79(TTGCGACG,-,0.00) -153(TTTACACG,-,0.00),-29(TGTACCCG,-,0.00) -110(CGCCGTCGCCGC,-,0.00),63(CCGGGGCCCGGG,+,0.00) -98(CGCGGCTCCTGG,-,0.00) 561_WT_peak_4629 chr20 36661945 36662213 + 96 NA promoter-TSS (NM_014657) promoter-TSS (NM_014657) 131 NM_021215 58490 Hs.278839 NM_021215 HPRD:08513 RPRD1B C20orf77|CREPT|NET60|dJ1057B20.2 regulation of nuclear pre-mRNA domain containing 1B protein-coding 0.097015 0.672862 -30(CCGACGCC,+,0.00) -32(CTCCGACG,-,0.00) -45(CGGTTTTC,-,0.00) 61(GCGGCGCGGGCG,+,0.00) 58(GCGGCGGCGC,+,0.00) 561_WT_peak_375 chr1 111459433 111459716 + 96 NA Intergenic MLT2F|LTR|ERVL 43852 NM_000560 963 Hs.443057 NM_000560 HPRD:01054 CD53 MOX44|TSPAN25 CD53 molecule protein-coding 0.003534 0.380282 561_WT_peak_1434 chr11 82868836 82869214 + 96 NA intron (NM_015885, intron 1 of 15) intron (NM_015885, intron 1 of 15) 888 NM_015885 51585 Hs.128959 NM_015885 PCF11 - PCF11 cleavage and polyadenylation factor subunit protein-coding 0.021164 0.543536 173(AGCCGCCT,-,0.00) 561_WT_peak_7291 chr9 73026433 73026648 + 96 NA intron (NM_001206, intron 1 of 1) intron (NM_001206, intron 1 of 1) 3033 NM_001206 687 Hs.150557 NM_001206 HPRD:04211 KLF9 BTEB|BTEB1 Kruppel-like factor 9 protein-coding 0.013953 0.393519 -136(GATTCCGGTGCC,-,0.00) -121(AGCCACCT,-,0.00) 561_WT_peak_3701 chr19 21511785 21512216 + 96 NA intron (NM_001297560, intron 1 of 3) intron (NM_001297560, intron 1 of 3) 212 NM_021269 7562 Hs.466296 NM_021269 HPRD:18322 ZNF708 KOX8|ZNF15|ZNF15L1 zinc finger protein 708 protein-coding 0.055684 0.625000 221(AAACCCGGAAGC,+,0.00) -103(AGCCGCCA,-,0.00),-1(AGCCACTT,-,0.00) 46(TCGGACGG,-,0.00) 44(TGTCGGAC,+,0.00),45(GTCGGACG,-,0.00) 220(CAAACCCG,+,0.00) -137(GAGACAGGACGC,+,0.00) -150(ACTGCGCA,+,0.00),213(GCCGCGCC,+,0.00) 228(GAAGCCGCCC,-,0.00) 231(GCCGCCCTGTCC,+,0.00) -122(GGGGCCCGGCTG,+,0.00) 561_WT_peak_1582 chr12 9800625 9801110 + 96 NA non-coding (NR_046447, exon 1 of 4) non-coding (NR_046447, exon 1 of 4) 224 NR_046446 374443 Hs.569124 NR_002814 ENSG00000256594 LOC374443 - C-type lectin domain family 2, member D pseudogene pseudo 0.072165 0.646091 -46(GGGACCGGAAGG,+,0.00) -116(CCGCCCCCCGGG,+,0.00) 176(TCGGTTGG,-,0.00) 294(GACCTGAGAGGG,-,0.00) -46(GGGACCGGAAGG,+,0.00) -133(GCCGCGCC,+,0.00) -154(GTGGGGCCAGTG,+,0.00) -139(GGCGCAGCCGCG,+,0.00) 76(AGCTCCGCCC,-,0.00) 172(CTTCTCGG,+,0.00) 161(CCCGCCAGGGCC,+,0.00) 561_WT_peak_7148 chr8 129005250 129005674 + 96 NA intron (NR_003367, intron 4 of 7) intron (NR_003367, intron 4 of 7) -15682 NR_031611 100302170 NR_031611 MIR1206 MIRN1206|hsa-mir-1206 microRNA 1206 ncRNA 0.021226 0.454118 561_WT_peak_3862 chr19 50316517 50316801 + 96 NA promoter-TSS (NM_001171937) promoter-TSS (NM_001171937) -92 NM_001171937 80199 Hs.288800 NM_025129 HPRD:08662 FUZ FY|NTD fuzzy planar cell polarity protein protein-coding 0.038732 0.491228 -14(GAACCAAGAAGC,+,0.00) 561_WT_peak_1424 chr11 78003490 78003557 + 96 NA intron (NM_080491, intron 1 of 9) intron (NM_080491, intron 1 of 9) 49403 NM_012296 9846 Hs.429434 NM_012296 HPRD:05866 GAB2 - GRB2-associated binding protein 2 protein-coding 0.000000 0.382353 561_WT_peak_6238 chr6 28625951 28626203 + 96 NA Intergenic tRNA-Ala-GCY_|tRNA|tRNA -70965 NM_052923 114821 Hs.176980 NM_052923 HPRD:11720 ZBED9 Buster4|SCAND3|ZFP38-L|ZNF305P2|ZNF452|dJ1186N24.3 zinc finger, BED-type containing 9 protein-coding 0.039683 0.371542 561_WT_peak_7193 chr8 146078220 146078451 + 96 NA 5' UTR (NM_014066, exon 1 of 2) 5' UTR (NM_014066, exon 1 of 2) 117 NM_001081004 28991 Hs.631856 NM_014066 HPRD:16301 COMMD5 HCARG COMM domain containing 5 protein-coding 0.086580 0.689655 38(GTCCCCGGAAGC,+,0.00) 58(AGCCACTT,-,0.00) -160(CGGCGGGCGCTC,-,0.00) 24(CAAAAGCG,+,0.00) -153(CGCTCCTCCGCG,-,0.00) 26(AAAGCGGGCC,-,0.00) -24(CCGAGTCG,-,0.00) -105(GCGGCGAAGC,+,0.00) 561_WT_peak_850 chr10 3846495 3846732 + 96 NA Intergenic Intergenic -19140 NM_001160124 1316 Hs.4055 NM_001300 HPRD:03632 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel-like factor 6 protein-coding 0.025316 0.529412 -46(AGGCCTCT,+,0.00) 561_WT_peak_4405 chr2 192502286 192502478 + 96 NA Intergenic Tigger15a|DNA|TcMar-Tigger -40416 NM_001254736 64859 Hs.591610 NM_022837 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding 0.000000 0.388601 9(GAGACAGGCAGC,+,0.00) 561_WT_peak_1876 chr12 120451406 120451861 + 96 NA intron (NM_207311, intron 2 of 8) intron (NM_207311, intron 2 of 8) 23985 NM_207311 92558 Hs.369763 NM_207311 HPRD:14292 CCDC64 BICDR-1|H_267D11.1 coiled-coil domain containing 64 protein-coding 0.017582 0.451754 -114(GGGTTTTG,-,0.00) 561_WT_peak_3599 chr19 6661812 6661996 + 96 NA Intergenic Tigger4|DNA|TcMar-Tigger 8695 NM_003807 8740 Hs.129708 NM_003807 HPRD:05157 TNFSF14 CD258|HVEML|LIGHT|LTg|TR2 tumor necrosis factor (ligand) superfamily, member 14 protein-coding 0.010870 0.416216 561_WT_peak_2842 chr16 50781202 50781743 + 96 NA intron (NM_015247, intron 3 of 19) intron (NM_015247, intron 3 of 19) 5443 NM_001042412 1540 Hs.578973 NM_015247 HPRD:05427 CYLD BRSS|CDMT|CYLD1|CYLDI|EAC|MFT|MFT1|SBS|TEM|USPL2 cylindromatosis (turban tumor syndrome) protein-coding 0.007394 0.376384 243(AGGTGTCT,+,0.00),350(AACCACTT,-,0.00) 561_WT_peak_5130 chr3 56717392 56717611 + 96 NA promoter-TSS (NM_001112736) promoter-TSS (NM_001112736) -366 NM_001112736 23272 Hs.116877 NM_015224 HPRD:10183 FAM208A C3orf63|RAP140|se89-1 family with sequence similarity 208, member A protein-coding 0.127854 0.700000 -156(GGCGCCCGAG,+,0.00) -108(TCGACGCC,+,0.00),11(GGCGTCGC,-,0.00) -43(CCCCCGCC,-,0.00) 30(CAAAACCC,+,0.00) -100(GCAGCCGTGGCC,+,0.00) 561_WT_peak_4072 chr2 55360679 55360966 + 96 NA Intergenic MIR3|SINE|MIR -83088 NM_153828 57142 Hs.637850 NM_007008 HPRD:07259 RTN4 ASY|NI220/250|NOGO|NOGO-A|NOGOC|NSP|NSP-CL|Nbla00271|Nbla10545|Nogo-B|Nogo-C|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding 0.010453 0.500000 -116(AGGTGTCT,+,0.00) 561_WT_peak_6710 chr7 73097332 73097733 + 96 NA promoter-TSS (NR_045512) promoter-TSS (NR_045512) 249 NM_032317 84277 Hs.647046 NM_032317 HPRD:10303 DNAJC30 WBSCR18 DnaJ (Hsp40) homolog, subfamily C, member 30 protein-coding 0.104738 0.666667 -9(CTCGGCGGCC,-,0.00) 54(AGCCGCCT,-,0.00) 2(CCGCGCTCCCGG,+,0.00) -162(GGTACGCG,-,0.00),114(CGTGCGCG,-,0.00) -94(CGTCGCTG,+,0.00),-68(TTGCGACG,-,0.00) -108(TCCGCGCA,+,0.00) 561_WT_peak_2739 chr16 23607306 23607752 + 96 NA exon (NM_005003, exon 1 of 5) exon (NM_005003, exon 1 of 5) 110 NM_005003 4706 Hs.189716 NM_005003 HPRD:11951 NDUFAB1 ACP|FASN2A|SDAP NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa protein-coding 0.114350 0.742729 -107(CGCCCCGGATGC,+,0.00) 104(AGGCGGCT,+,0.00),258(TGGCGGCT,+,0.00) 98(GCGGGCAGGCGG,-,0.00) 95(GCCGCGGG,+,0.00) 41(GTGCTGAGAGGC,-,0.00) -155(GCGGAGCGAGCC,+,0.00) 25(CGCGGAGCAGAG,+,0.00) 134(GACGCCATGGCT,+,0.00),136(CGCCATGGCTAC,-,0.00),253(GCCCCTGGCGGC,-,0.00) -158(GCTGCGGAGC,+,0.00),43(GCTGAGAGGC,+,0.00),166(GCGCCGCCGC,-,0.00) 561_WT_peak_7396 chr9 115095651 115095900 + 96 NA promoter-TSS (NM_001244898) promoter-TSS (NM_001244898) 169 NM_005156 9991 Hs.269988 NM_005156 HPRD:09603 PTBP3 ROD1 polypyrimidine tract binding protein 3 protein-coding 0.116466 0.716000 53(GAGCCCCGGCCG,+,0.00) -143(CTTACGCG,-,0.00) 65(GTCCGAGG,-,0.00) -164(GCCGCGCA,+,0.00),-86(GCCGCGCC,+,0.00) 49(TGCGGAGCCCCG,+,0.00) -80(CCGCCTAG,-,0.00) -111(GGCGCCAAGGCA,+,0.00) -154(GCTCCCCAGC,-,0.00),47(TCTGCGGAGC,+,0.00) 561_WT_peak_6492 chr6 139309217 139309593 + 96 NA promoter-TSS (NM_001128617) promoter-TSS (NM_001128617) -7 NM_031922 85021 Hs.334603 NM_031922 HPRD:09687 REPS1 RALBP1 RALBP1 associated Eps domain containing 1 protein-coding 0.117021 0.726790 -53(CCTCCCTCCGCC,+,0.00),111(GGAGGAGGCCGC,-,0.00) -48(CTCCGCCGCC,-,0.00),13(GGCGGCCGCG,+,0.00) -147(TCCACGCC,+,0.00),-106(GGCTTCGA,-,0.00) -135(GAGCGGCAGCGC,+,0.00) 142(CGCCCGGC,-,0.00) -77(GGGCTGAGCGTG,-,0.00) 173(TGCGCGGA,-,0.00) -28(CCCCGGCCCGGC,-,0.00) -63(CGCCGCTCCGCC,-,0.00) 90(GCTTGGCCGC,-,0.00) 82(CCGGGCTGGCTT,+,0.00) 561_WT_peak_1783 chr12 88535932 88536169 + 96 NA promoter-TSS (NM_181783) promoter-TSS (NM_181783) -23 NM_181783 160418 Hs.331268 NM_181783 HPRD:10243 TMTC3 SMILE transmembrane and tetratricopeptide repeat containing 3 protein-coding 0.075949 0.626050 3(CCGGGGCGGCGG,-,0.00) -125(GGCGTGGA,-,0.00) -17(CGCGTAAG,+,0.00) 30(CGGGAGGAGCAG,+,0.00) 561_WT_peak_2056 chr13 50811092 50811295 + 96 NA intron (NR_109974, intron 2 of 6) intron (NR_109974, intron 2 of 6) 65039 NR_002183 145165 Hs.511834 NM_153290 ST13P4 FAM10A4|FAM10A4P suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 4 pseudo 0.024631 0.411765 561_WT_peak_7132 chr8 124829327 124829560 + 96 NA Intergenic L1M7|LINE|L1 -34784 NM_001039112 654463 Hs.632058 NM_001039112 ENSG00000214814 FER1L6 C8ORFK23 fer-1-like family member 6 protein-coding 0.004292 0.414530 561_WT_peak_3045 chr17 13972835 13973015 + 96 NA promoter-TSS (NR_049718) promoter-TSS (NR_049718) -150 NR_049718 100874058 Hs.720411 NR_049718 ENSG00000236088 COX10-AS1 COX10-AS|COX10AS COX10 antisense RNA 1 ncRNA 0.072222 0.618785 -17(GGGCACGA,-,0.00) -29(TGTACCCG,-,0.00) -100(GGAGCGGCCC,-,0.00) -25(CCCGCCTTGGGC,+,0.00) 561_WT_peak_4582 chr20 24008022 24008294 + 96 NA Intergenic Intergenic -38742 NM_178311 92086 Hs.355394 NM_080920 HPRD:17037 GGTLC1 GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2 gamma-glutamyltransferase light chain 1 protein-coding 0.022059 0.501832 15(GGGAGCCAAAGC,+,0.00) -11(CCGAGAAG,-,0.00) -96(GCCCATGGCTGC,-,0.00) 561_WT_peak_3281 chr17 57914773 57915031 + 96 NA intron (NM_030938, intron 10 of 11) intron (NM_030938, intron 10 of 11) -3725 NR_029493 406991 Hs.444569 NR_029493 miRBase:MI0000077 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA 0.015504 0.401544 -107(CCAAACCG,+,0.00) 561_WT_peak_2120 chr14 21738100 21738515 + 96 NA promoter-TSS (NM_001077442) promoter-TSS (NM_001077442) -669 NM_031314 3183 Hs.508848 NM_004500 HPRD:01243 HNRNPC C1|C2|HNRNP|HNRPC|SNRPC heterogeneous nuclear ribonucleoprotein C (C1/C2) protein-coding 0.012048 0.454327 244(ACTGCGCA,+,0.00) 136(AAATTGGCCC,-,0.00) 561_WT_peak_2984 chr17 2718366 2718552 + 96 NA intron (NM_015085, intron 2 of 24) MER5A|DNA|hAT-Charlie 18727 NM_001100398 23108 Hs.499659 NM_015085 HPRD:17028 RAP1GAP2 GARNL4|RAP1GA3 RAP1 GTPase activating protein 2 protein-coding 0.032258 0.609626 -42(GCTTCACAGC,-,0.00) 561_WT_peak_6226 chr6 27833082 27833473 + 96 NA exon (NM_003511, exon 1 of 1) exon (NM_003511, exon 1 of 1) 170 NM_003511 8332 Hs.233568 NM_003511 HPRD:09103 HIST1H2AL H2A.i|H2A/i|H2AFI|dJ193B12.9 histone cluster 1, H2al protein-coding 0.092072 0.635204 20(GGGCCGGCGCGC,-,0.00) -54(TCGTGCCG,+,0.00) 17(TCGGGGCCGGCG,+,0.00) -30(GGGCCGAGTG,+,0.00),91(AACGCCGCCC,-,0.00) 561_WT_peak_5209 chr3 113233905 113234093 + 96 NA promoter-TSS (NM_144718) promoter-TSS (NM_144718) 35 NM_144718 152185 Hs.477144 NM_144718 HPRD:11242 SPICE1 CCDC52|SPICE spindle and centriole associated protein 1 protein-coding 0.101064 0.666667 -52(GCTTCCGGGCTG,-,0.00) -56(AGCGGCTT,-,0.00) -24(AGCTCCGCCC,-,0.00) 561_WT_peak_1594 chr12 10765895 10766283 + 96 NA promoter-TSS (NM_001300739) promoter-TSS (NM_001300739) 119 NM_018048 55110 Hs.104650 NM_018048 MAGOHB MGN2|mago|magoh mago-nashi homolog B (Drosophila) protein-coding 0.087629 0.593830 -106(CTCCGCCGCC,-,0.00) 81(CCGGGAAGCCCG,-,0.00) -18(CCGGCCGA,+,0.00) 114(CCCCCGGC,-,0.00) -44(GCGTGCCG,+,0.00),8(TCGTGCCC,+,0.00) 76(TGTACCCG,-,0.00) 561_WT_peak_3091 chr17 26972105 26972497 + 96 NA promoter-TSS (NM_014680) promoter-TSS (NM_014680) -124 NM_014680 9703 Hs.151761 NM_014680 HPRD:11064 KIAA0100 BCOX|BCOX1|CT101 KIAA0100 protein-coding 0.132653 0.753181 60(GGAGGAGGGCGA,-,0.00) -155(CATGCCGGGCCC,-,0.00),157(GAGTCCGGGCCC,-,0.00),201(CATTTCGGTCCG,-,0.00) -159(CCGCCATGCCGG,+,0.00),57(CCGGGAGGAGGG,-,0.00) -144(CCGACGCC,+,0.00) 176(GGGCTGGCGGTG,-,0.00) 33(CGTGCGCG,-,0.00) 205(TCGGTCCG,-,0.00) -162(CCCCCGCC,-,0.00),-120(GCCGCGGG,+,0.00) -53(CCCCGCCTTCCG,-,0.00),37(CGCGAGGAGCGG,+,0.00) 3(GTCCTACG,-,0.00),20(GGCCGACG,-,0.00) -133(TCCGCGCA,+,0.00) 121(CCCGGAACCGCG,+,0.00),138(CGGGGACCCGCG,+,0.00) -160(CCCGCCATGCCG,+,0.00),-158(CGCCATGCCGGG,-,0.00) 561_WT_peak_3856 chr19 49999171 49999641 + 96 NA promoter-TSS (NM_001015) promoter-TSS (NM_001015) -216 NM_001015 6205 Hs.433529 NM_001015 HPRD:01599 RPS11 S11 ribosomal protein S11 protein-coding 0.087234 0.605096 -53(CCCGGCCGCC,-,0.00) -24(AGCCGCCT,-,0.00) -83(GCGACGCC,+,0.00),257(TCGAGGCC,+,0.00) 135(CGCCCGGC,-,0.00) -85(TGGCGACG,-,0.00) 53(GAAACAGGATGG,+,0.00) -49(GCCGCCCA,+,0.00) 561_WT_peak_3658 chr19 14628974 14629162 + 96 NA promoter-TSS (NM_001300914) promoter-TSS (NM_001300914) 303 NM_006145 3337 Hs.515210 NM_006145 HPRD:05198 DNAJB1 HSPF1|Hdj1|Hsp40|RSPH16B|Sis1 DnaJ (Hsp40) homolog, subfamily B, member 1 protein-coding 0.127660 0.661376 -101(TCGGCGCC,+,0.00) -18(GCCGCGGG,+,0.00) -28(CGTCCGAC,+,0.00),-27(GTCCGACG,-,0.00) 15(TTTACCCA,-,0.00) -154(TGCGCGGG,-,0.00) -61(GCGCCTGGCGGC,-,0.00) 561_WT_peak_5822 chr5 76034653 76035257 + 96 NA Intergenic Intergenic 23087 NM_001992 2149 Hs.482562 NM_001992 HPRD:01763 F2R CF2R|HTR|PAR-1|PAR1|TR coagulation factor II (thrombin) receptor protein-coding 0.013245 0.471074 -59(AGCCACCT,-,0.00) -92(AGAACAGGAAGC,+,0.00) 317(CGAGGCGG,+,0.00) 561_WT_peak_7344 chr9 94015775 94016028 + 96 NA intron (NM_001698, intron 6 of 9) intron (NM_001698, intron 6 of 9) 108305 NM_001698 549 Hs.175905 NM_001698 HPRD:08987 AUH - AU RNA binding protein/enoyl-CoA hydratase protein-coding 0.003953 0.452756 -35(CGGGTTTG,-,0.00) 561_WT_peak_4162 chr2 85132679 85133051 + 96 NA intron (NM_021103, intron 1 of 2) CpG 102 NM_021103 9168 Hs.446574 NM_021103 HPRD:01779 TMSB10 MIG12|TB10 thymosin beta 10 protein-coding 0.134409 0.745308 93(CGGACCGGACGC,+,0.00) 55(CCGGGCGGGCGC,-,0.00) -82(GGGCGGGCGCCG,-,0.00),57(GGGCGGGCGCGC,-,0.00) -160(TCCCGCCCCT,+,0.00),-84(AGGGGCGGGC,-,0.00) 16(GGCGGGGG,+,0.00) -17(CGGAACGA,-,0.00),180(CGGCACGC,-,0.00) -104(GGCGCGGC,-,0.00) -81(GGCGGGCGCCGC,-,0.00),6(GCGGCGCCGGGG,+,0.00) 88(CTTCTCGG,+,0.00),130(CCGAGAAG,-,0.00) 185(CGCCTTGGCGCG,-,0.00) 561_WT_peak_6434 chr6 111195899 111196344 + 96 NA non-coding (NR_109768, exon 1 of 6) non-coding (NR_109768, exon 1 of 6) 134 NM_001634 262 Hs.159118 NM_001634 HPRD:01622 AMD1 ADOMETDC|AMD|SAMDC adenosylmethionine decarboxylase 1 protein-coding 0.060674 0.468610 182(CGGGAGAAGAGG,+,0.00) 57(CAAAGCCG,+,0.00) 63(CGGGAAAA,+,0.00) 169(GCGGCGGCAGCG,+,0.00) 274(CCGAGAAG,-,0.00) 561_WT_peak_3892 chr19 54714712 54714956 + 96 NA Intergenic Intergenic 10108 NM_001013 6203 Hs.467284 NM_001013 HPRD:04696 RPS9 S9 ribosomal protein S9 protein-coding 0.020492 0.502041 -93(AGCCACTA,-,0.00),-62(AAGTGGTT,+,0.00) 561_WT_peak_6381 chr6 82957177 82957714 + 96 NA promoter-TSS (NM_001300906) promoter-TSS (NM_001300906) 26 NM_015525 25998 Hs.306425 NM_015525 HPRD:12105 IBTK BTBD26|BTKI inhibitor of Bruton agammaglobulinemia tyrosine kinase protein-coding 0.068901 0.637546 75(AGGCGGCT,+,0.00),90(AGCCGCTA,-,0.00) 158(AGGCGGGCGCTG,-,0.00),172(TGGCTGGGGCTC,-,0.00) -92(ACGGTCGG,-,0.00) -61(AGTCGCTA,+,0.00) 319(CGGGGAAA,+,0.00) -125(CCCTGCCCCCGG,-,0.00) 242(TCTGCCATGGCC,+,0.00) 561_WT_peak_3993 chr2 26467231 26467483 + 95 NA promoter-TSS (NM_000183) promoter-TSS (NM_000183) 237 NM_000182 3030 Hs.516032 NM_000182 HPRD:02934 HADHA ECHA|GBP|HADH|LCEH|LCHAD|MTPA|TP-ALPHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit protein-coding 0.067460 0.675889 -146(GAAACCGGGTCC,-,0.00) 32(AAGCGGCT,+,0.00) -101(GGGCTGGGGCAG,-,0.00) 52(CGCCCGGC,-,0.00) -46(CGGCAGGA,-,0.00) -71(CGCGGCTCCGGG,-,0.00) -11(CGGCCAGGCCTC,-,0.00) 561_WT_peak_1729 chr12 56709548 56709816 + 95 NA TTS (NM_001166279) TTS (NM_001166279) 446 NM_001190991 10330 Hs.8752 NM_014255 HPRD:12056 CNPY2 HP10390|MSAP|TMEM4|ZSIG9 canopy FGF signaling regulator 2 protein-coding 0.082090 0.687732 -129(TCGCCGCC,+,0.00),22(TCGCCGCC,+,0.00) -91(GCCGCCGTGGCC,+,0.00) -132(GCCTCGCCGC,-,0.00),19(GCTTCGCCGC,-,0.00) 561_WT_peak_5544 chr4 89205972 89206291 + 95 NA promoter-TSS (NM_152542) promoter-TSS (NM_152542) -148 NM_152542 152926 Hs.43744 NM_152542 HPRD:15167 PPM1K BDP|MSUDMV|PP2Ckappa|PP2Cm|PTMP|UG0882E07 protein phosphatase, Mg2+/Mn2+ dependent, 1K protein-coding 0.050157 0.515625 -136(TGCGCGGT,-,0.00) -163(GCTCCCCAGC,-,0.00) 561_WT_peak_6663 chr7 44886846 44887565 + 95 NA intron (NM_138635, intron 1 of 4) intron (NM_138635, intron 1 of 4) 520 NM_201517 94239 Hs.488189 NM_012412 HPRD:13623 H2AFV H2A.Z-2|H2AV H2A histone family, member V protein-coding 0.063978 0.536111 267(CCGTCCTCCTCC,+,0.00) 543(CCCGGCCGCC,-,0.00) 416(CCCGGCGGGCGG,-,0.00) 423(GGCGGCGA,-,0.00),486(GGCGCCGA,-,0.00),490(CCGACGCC,+,0.00) 436(TCGGCCGG,-,0.00) 414(CCCCCGGC,-,0.00),532(CCCCCGGC,-,0.00) 482(TAGCGGCG,-,0.00) 422(GGGCGGCGAGGG,-,0.00) -33(GAAAACCG,+,0.00) 348(TCTACCCG,-,0.00) 383(CGTGTCGG,+,0.00) 403(GGACATGGCGCC,-,0.00),492(GACGCCAGGGCC,+,0.00) 391(GCTCCGCAGC,-,0.00) 517(CTCCCAGGCCCC,-,0.00) 561_WT_peak_6814 chr7 107300250 107300480 + 95 NA promoter-TSS (NM_000441) promoter-TSS (NM_000441) -715 NM_000441 5172 Hs.571246 NM_000441 HPRD:05735 SLC26A4 DFNB4|EVA|PDS|TDH2B solute carrier family 26 (anion exchanger), member 4 protein-coding 0.013043 0.445887 561_WT_peak_2414 chr15 29561604 29562346 + 95 NA promoter-TSS (NM_138704) promoter-TSS (NM_138704) 45 NM_138704 56160 Hs.94011 NM_138704 HPRD:10503 NDNL2 HCA4|MAGEG1|MAGEL3|NSE3|NSMCE3 necdin-like 2 protein-coding 0.092992 0.624495 -67(CGGCGGGCGCCC,-,0.00) -23(GCCCGGCCCG,+,0.00) -86(GGCGGGGG,+,0.00),-24(CGCCCGGC,-,0.00) 452(TGTCGCTA,+,0.00) 90(CCCTCTCGGCCT,+,0.00) 12(CAAAGCCG,+,0.00),127(CGGTTTTT,-,0.00) 300(TGGGCGGT,-,0.00),313(TGCGCGGC,-,0.00) -85(GCGGGGGCGGCC,+,0.00),-24(CGCCCGGCCCGC,-,0.00) 50(CGCGAAGCCCCG,+,0.00) 109(AGAGCGGCCC,-,0.00) 49(CCGCGAAG,-,0.00) -92(CCCCACGGCGGG,-,0.00) 95(TCGGCCTGGCCG,+,0.00),96(CGGCCTGGCCGC,-,0.00) 561_WT_peak_72 chr1 16160957 16161827 + 95 NA non-coding (NR_024279, exon 2 of 2) non-coding (NR_024279, exon 2 of 2) -12967 NM_015001 23013 Hs.744843 NM_015001 HPRD:10230 SPEN HIAA0929|MINT|RBM15C|SHARP spen family transcriptional repressor protein-coding 0.097701 0.649828 223(GGCGGTCGAG,+,0.00),335(CTCGGCCGCG,-,0.00) 139(TCGGCGCC,+,0.00),238(GGCCTCGA,-,0.00) 304(GCGCGCCCGCCG,+,0.00) -17(CGCGCACG,+,0.00) 217(GCGGTCGG,-,0.00),378(TCGCTCGG,-,0.00),382(TCGGTCGC,-,0.00) 242(TCGAGCCG,+,0.00) -122(TGGTTTTG,-,0.00),-29(CAAAGCCG,+,0.00),-11(CGGGTTTG,-,0.00) 156(CCCCGGCCGCGC,-,0.00) 311(CGCCGCTCCGCC,-,0.00) 263(AAAGCGGCCG,-,0.00),267(CGGCCGCGTT,+,0.00),527(AACGCGGCGC,-,0.00) 213(CGAGGCGG,+,0.00),247(CCGAGAAG,-,0.00) -101(GCCTCCCAGC,-,0.00) 296(CAGCCCGGGCGC,-,0.00) 561_WT_peak_951 chr10 35438515 35438717 + 95 NA intron (NR_051975, intron 2 of 3) intron (NR_051975, intron 2 of 3) 11906 NM_183011 1390 Hs.200250 NM_001881 HPRD:00444 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding 0.004950 0.502463 561_WT_peak_1040 chr10 73508417 73508900 + 95 NA 3' UTR (NM_022153, exon 7 of 7) 3' UTR (NM_022153, exon 7 of 7) -11077 NM_001168390 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding 0.028986 0.634298 -151(CTGCCCCAGCCC,+,0.00) 157(AGGGCAGGGC,-,0.00) 24(CGTCCCTA,+,0.00) 100(AAAACAGGAAAC,+,0.00) 239(CAGCCAGGCCTG,-,0.00) 561_WT_peak_3696 chr19 19887592 19887753 + 95 NA promoter-TSS (NR_026956) promoter-TSS (NR_026956) -450 NR_026956 284440 Hs.665307 NR_026956 LINC00663 - long intergenic non-protein coding RNA 663 ncRNA 0.031056 0.574074 -155(CGGCATGA,-,0.00) 561_WT_peak_6125 chr6 24721783 24722063 + 95 NA Intergenic Intergenic -2520 NM_030939 81688 Hs.744857 NM_030939 C6orf62 Nbla00237|XTP12|dJ30M3.2 chromosome 6 open reading frame 62 protein-coding 0.042857 0.548043 -78(CAGGGAGGGCGG,-,0.00) 22(TTTACCCA,-,0.00) -94(CCGCCACG,-,0.00) 561_WT_peak_1475 chr11 108107360 108107588 + 95 NA intron (NM_000051, intron 5 of 62) intron (NM_000051, intron 5 of 62) 13915 NM_000051 472 Hs.367437 NM_000051 HPRD:06347 ATM AT1|ATA|ATC|ATD|ATDC|ATE|TEL1|TELO1 ATM serine/threonine kinase protein-coding 0.004386 0.388646 -25(GTTTCCTGTTTA,-,0.00) 561_WT_peak_2559 chr15 75917950 75918581 + 95 NA 5' UTR (NM_005701, exon 1 of 9) 5' UTR (NM_005701, exon 1 of 9) 181 NM_001042581 10073 Hs.21577 NM_005701 HPRD:07441 SNUPN KPNBL|RNUT1|Snurportin1 snurportin 1 protein-coding 0.063391 0.636076 -35(CCGCCCTCCCCC,+,0.00),239(GGAGGAGGCTGA,-,0.00) 26(GTTTCCGGCTCC,-,0.00) -35(CCGCCCTCCCCC,+,0.00) 267(TCAACGCC,+,0.00) -89(CGCACGCG,-,0.00) 302(TCCCGGGCCT,+,0.00) -27(CCCCCGCC,-,0.00) -92(CGTCGCAC,+,0.00),-68(GGCCGACG,-,0.00) -107(CCAAACCG,+,0.00) -138(GCGGGGCCCGGG,+,0.00),-89(CGCACGCGCCGC,-,0.00),-2(CGCTGGGCCCAC,-,0.00) -84(GCGCCGCCGC,-,0.00) 561_WT_peak_894 chr10 15139465 15139781 + 95 NA promoter-TSS (NM_153244) promoter-TSS (NM_153244) -305 NM_153244 221060 Hs.567777 NM_153244 HPRD:16572 C10orf111 bA455B2.4 chromosome 10 open reading frame 111 protein-coding 0.091772 0.652997 -76(CCGCCCTCCCGG,+,0.00) -133(CGCGCACG,+,0.00) -48(CGGGCCGGGC,-,0.00) -45(GCCGGGCG,+,0.00),48(CCCCCGCC,-,0.00) -60(GCCGCCCA,+,0.00) -87(CGCAGGACCCGC,-,0.00) 561_WT_peak_1951 chr13 22688851 22689021 + 95 NA Intergenic Intergenic -95488 NR_103810 100506622 Hs.255773 NR_103810 LINC00540 - long intergenic non-protein coding RNA 540 ncRNA 0.005882 0.415205 561_WT_peak_4295 chr2 130938966 130939152 + 95 NA promoter-TSS (NM_025029) promoter-TSS (NM_025029) 271 NM_017951 55627 Hs.516450 NM_017751 HPRD:13374 SMPD4 NET13|NSMASE-3|NSMASE3 sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3) protein-coding 0.107527 0.732620 10(AGCCGCCA,-,0.00) -134(CGGCCCGA,-,0.00) -15(TAGCGTCG,-,0.00),-12(CGTCGCTC,+,0.00) -65(CGCCGGAC,+,0.00) -73(CCCCAGGGCGCC,-,0.00) 561_WT_peak_5701 chr5 40338688 40338882 + 95 NA Intergenic L1PA6|LINE|L1 286392 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA 0.010309 0.364103 561_WT_peak_5355 chr3 187462994 187463225 + 95 NA intron (NM_001706, intron 1 of 9) intron (NM_001706, intron 1 of 9) 404 NM_001706 604 Hs.478588 NM_001706 HPRD:00180 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 B-cell CLL/lymphoma 6 protein-coding 0.056277 0.469828 -30(CGGCACCA,-,0.00) -40(GCGGCGGCAGCG,+,0.00),-31(GCGGCACCAGCG,+,0.00),-13(GCGGCGGCGGCG,+,0.00) 561_WT_peak_7238 chr9 27573081 27573381 + 95 NA intron (NM_145005, intron 1 of 4) CpG 260 NM_018325 203228 Hs.493639 NM_018325 HPRD:12975 C9orf72 ALSFTD|FTDALS chromosome 9 open reading frame 72 protein-coding 0.100000 0.671096 -3(GGGCCCGGATGC,+,0.00) -111(CCGGGAAGGAGA,-,0.00),-15(CCGGGAAGCCCG,-,0.00) 85(TGCGTCGA,-,0.00) 54(TCGGTCAG,-,0.00) 22(AGTCGCTA,+,0.00) 114(TCTACCCG,-,0.00) -38(CGCCGCCGCCGC,-,0.00),-35(CGCCGCCGCCGC,-,0.00),-32(CGCCGCCGCCGC,-,0.00),-29(CGCCGCCGCCGC,-,0.00),-26(CGCCGCCGCCGC,-,0.00) -39(GCGCCGCCGC,-,0.00),-16(GCCGGGAAGC,+,0.00) 561_WT_peak_6989 chr8 41372479 41372758 + 95 NA Intergenic Intergenic -14107 NM_032336 84296 Hs.656996 NM_032336 HPRD:11583 GINS4 SLD5 GINS complex subunit 4 (Sld5 homolog) protein-coding 0.003584 0.317857 -145(CAACCAGGAAGC,+,0.00) 561_WT_peak_3100 chr17 27717313 27717715 + 95 NA promoter-TSS (NM_025142) promoter-TSS (NM_025142) -166 NR_039749 100616122 NR_039749 miRBase:MI0016890 MIR4523 - microRNA 4523 ncRNA 0.104478 0.732010 12(TCGCCCTGCGCC,+,0.00) 29(CGGGCCGAAAGC,+,0.00) 68(TCCCGGCCCC,+,0.00) 109(CCCGCGGC,-,0.00),202(GGCGGGGG,+,0.00) 208(GGACCGAGAGGG,-,0.00) 96(GTCCGCCG,-,0.00) -116(CGGGTAAA,+,0.00) 9(CGCTCGCCCTGC,-,0.00) 191(CGAGGGGCCGCG,+,0.00) 82(GACCCCGCCC,-,0.00) 24(CTTCGCGG,+,0.00) -91(GCGGCCGGGCTC,+,0.00),-21(GCCGCCTGCCTG,+,0.00),102(CGGCCGGCCCGC,-,0.00) 561_WT_peak_560 chr1 156192726 156193016 + 95 NA intron (NM_001199664, intron 1 of 4) intron (NM_001199664, intron 1 of 4) 10092 NM_001199663 100527963 Hs.530479 NM_001199661 ENSG00000260238 PMF1-BGLAP PMF1 PMF1-BGLAP readthrough protein-coding 0.006897 0.426117 561_WT_peak_1118 chr10 102130657 102130898 + 95 NA Intergenic Intergenic -2556 NR_026762 90271 Hs.628088 NR_026762 LINC00263 C10orf75|NCRNA00263 long intergenic non-protein coding RNA 263 ncRNA 0.012448 0.458678 19(TCTTCCTCTTTC,-,0.00) 561_WT_peak_4959 chr22 43741923 43742103 + 95 NA Intergenic Intergenic -2619 NM_173050 80274 Hs.133995 NM_173050 SCUBE1 - signal peptide, CUB domain, EGF-like 1 protein-coding 0.005556 0.502762 561_WT_peak_2079 chr13 79980332 79980825 + 95 NA promoter-TSS (NM_001286631) promoter-TSS (NM_001286631) 134 NR_038991 100505538 Hs.600720 NR_038991 ENSG00000227354 RBM26-AS1 - RBM26 antisense RNA 1 ncRNA 0.070994 0.550607 114(CCGGTAAGACGG,-,0.00) 187(CGCGTGCG,+,0.00),189(CGTGCGCG,-,0.00) 149(TCCTGCCG,+,0.00) -126(CCGGTAAA,+,0.00) -46(TGCGCGGG,-,0.00) 561_WT_peak_5276 chr3 141130993 141131201 + 95 NA intron (NM_001080412, intron 7 of 7) intron (NM_001080412, intron 7 of 7) -74829 NM_006506 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding 0.019231 0.401914 -73(TGGTTTTG,-,0.00),26(CAAAGCCG,+,0.00) 561_WT_peak_7356 chr9 97633511 97633811 + 95 NA intron (NM_032823, intron 5 of 14) intron (NM_032823, intron 5 of 14) 61417 NR_031755 100313780 NR_031755 MIR2278 - microRNA 2278 ncRNA 0.006667 0.418605 -113(AGGCCTCT,+,0.00) 561_WT_peak_5895 chr5 130616920 130617159 + 95 NA intron (NM_001038702, intron 1 of 4) intron (NM_001038702, intron 1 of 4) 17337 NM_020240 56990 Hs.508829 NM_020240 HPRD:16695 CDC42SE2 SPEC2 CDC42 small effector 2 protein-coding 0.000000 0.391667 0(AGAGACTT,-,0.00) 561_WT_peak_4959-2 chr22 43742314 43742361 + 95 NA Intergenic L2c|LINE|L2 -2943 NM_173050 80274 Hs.133995 NM_173050 SCUBE1 - signal peptide, CUB domain, EGF-like 1 protein-coding 0.000000 0.437500 561_WT_peak_5303 chr3 158519921 158520119 + 95 NA exon (NM_022736, exon 1 of 16) exon (NM_022736, exon 1 of 16) 305 NM_001167903 64747 Hs.58663 NM_022736 HPRD:07851 MFSD1 SMAP4 major facilitator superfamily domain containing 1 protein-coding 0.090909 0.703518 -141(GGAGGAGGAGGA,-,0.00),-138(GGAGGAGGATGA,-,0.00) -75(CCCGGCCGCC,-,0.00) -122(GCGCGGGCGCTC,-,0.00) -88(CCGACAGA,+,0.00) 561_WT_peak_6449 chr6 116892617 116893059 + 95 NA intron (NM_015952, intron 1 of 6) CpG 308 NM_016104 51389 Hs.532164 NM_015952 HPRD:15286 RWDD1 PTD013 RWD domain containing 1 protein-coding 0.070136 0.647856 -74(AGGTGTCT,+,0.00) -119(CCGCTCTCCCGG,+,0.00) 44(CCCGCGGC,-,0.00) -109(GGCGCGGC,-,0.00) -21(CGAGGAGCAGCG,+,0.00) -80(CCGCCTAG,-,0.00) -134(CCGCCTGGCCGC,-,0.00) 561_WT_peak_6711 chr7 73097971 73098263 + 95 NA promoter-TSS (NM_032317) promoter-TSS (NM_032317) 219 NM_001202560 114049 Hs.647063 NM_017528 HPRD:15659 WBSCR22 HASJ4442|HUSSY-3|MERM1|PP3381|WBMT Williams Beuren syndrome chromosome region 22 protein-coding 0.089041 0.627986 -125(CCCGGGGCCCGC,-,0.00),-124(CCGGGGCCCGCG,+,0.00) 561_WT_peak_3721 chr19 34664141 34664481 + 95 NA intron (NM_015578, intron 1 of 9) intron (NM_015578, intron 1 of 9) 959 NM_001114093 26065 Hs.744009 NM_015578 HPRD:12697 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A, SCD6 homolog A (S. cerevisiae) protein-coding 0.044118 0.542522 -57(TAAACCGGAATC,+,0.00) -116(TCGATGCC,+,0.00),15(CCGACGCC,+,0.00),103(GGCGTTGA,-,0.00) -66(TTTACCTG,-,0.00) 149(CCGAGAAG,-,0.00) 561_WT_peak_2640 chr16 284971 285297 + 95 NA intron (NR_104317, intron 1 of 13) CpG 589 NM_001284497 83986 Hs.513225 NM_032039 HPRD:12677 ITFG3 C16orf9|gs19 integrin alpha FG-GAP repeat containing 3 protein-coding 0.076687 0.645260 -139(CCGCCTTCCCGA,+,0.00) -119(CGGGCCGGGA,-,0.00) 99(TGGTGCCG,+,0.00) -131(CCGAGTCG,-,0.00),-130(CGAGTCGG,+,0.00) 51(CCCGCCGTGGCG,+,0.00) -105(GCGGCGGGGC,+,0.00) 561_WT_peak_3822 chr19 47777178 47777194 + 95 NA promoter-TSS (NM_178511) promoter-TSS (NM_178511) -473 NR_037675 255783 Hs.128690 NM_178511 ENSG00000257704 INAFM1 PRR24 InaF-motif containing 1 protein-coding 0.000000 0.529412 561_WT_peak_2642 chr16 475223 475789 + 95 NA promoter-TSS (NM_014700) promoter-TSS (NM_014700) -162 NM_014700 9727 Hs.531642 NM_014700 HPRD:18521 RAB11FIP3 CART1|Rab11-FIP3 RAB11 family interacting protein 3 (class II) protein-coding 0.125442 0.719577 306(CCGGCCTCCTCG,+,0.00),329(CCGGCCTCCTCG,+,0.00) 314(CTCGGCCCCC,-,0.00),337(CTCGGCCCCC,-,0.00),386(CTAGGCCGCC,-,0.00) 374(TCGCCGCC,+,0.00) 326(CCCCCGGC,-,0.00),349(CCCCCGCC,-,0.00) 199(GCCCGACG,-,0.00) -111(TTTACTCG,-,0.00) 219(TGGGCGGC,-,0.00) 211(GCGGGGCCTGGG,+,0.00),222(GCGGCGGCGGCG,+,0.00) 104(CTTCGCGG,+,0.00) 215(GGCCTGGGCGGC,-,0.00) 294(GCTCCGCGGC,-,0.00),393(GCCCCGCCGC,-,0.00) 213(GGGGCCTGGGCG,+,0.00) 561_WT_peak_7358 chr9 98224912 98225120 + 95 NA promoter-TSS (NR_038982) promoter-TSS (NR_038982) -875 NR_038982 100507346 Hs.661847 NR_038982 LOC100507346 - uncharacterized LOC100507346 ncRNA 0.033654 0.583732 -28(CCGGGGAGGGGG,-,0.00) -148(GGGAAGGCGCTC,-,0.00) -111(AGGGTAAA,+,0.00) -89(AGAACAGGAAGC,+,0.00) 561_WT_peak_5769 chr5 61708586 61708901 + 95 NA 5' UTR (NM_016338, exon 1 of 30) 5' UTR (NM_016338, exon 1 of 30) 170 NM_016338 51194 Hs.482269 NM_016338 HPRD:10003 IPO11 RanBP11 importin 11 protein-coding 0.101587 0.670886 -120(AAGCCGCT,+,0.00),-119(AGCCGCTT,-,0.00) -29(GCGGGAGGGCCG,-,0.00) -147(GCGACGCC,+,0.00),-58(CCGACGCC,+,0.00) -62(CCAACCGA,+,0.00),-9(CCGACCGA,+,0.00) -24(AGGGCCGGGC,-,0.00) 16(CGGCCCGA,-,0.00) 122(TAGCGAGG,-,0.00) -33(GGGAGCGGGAGG,+,0.00),40(GGGAGTGGAAGG,+,0.00) -164(CCGCGTCG,-,0.00) -150(GCTGCGACGC,+,0.00) 561_WT_peak_1804 chr12 94602209 94602420 + 95 NA intron (NM_005761, intron 4 of 30) intron (NM_005761, intron 4 of 30) -53983 NR_037687 10154 Hs.584845 NM_005761 HPRD:05036 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding 0.018957 0.429245 561_WT_peak_3231 chr17 46985321 46985945 + 95 NA promoter-TSS (NM_023079) promoter-TSS (NM_023079) -98 NM_023079 65264 Hs.514297 NM_023079 HPRD:08589 UBE2Z USE1 ubiquitin-conjugating enzyme E2Z protein-coding 0.075321 0.651200 421(CCGGGGCGGCGG,-,0.00) 19(TCGCCGCC,+,0.00) 393(CCGACTGA,+,0.00) 227(GGCGGGGG,+,0.00) 103(CCGCTACTTCCG,-,0.00),318(CGGGAGCAGCGG,+,0.00) 340(CGGCGGAC,+,0.00),391(GTCCGACT,-,0.00) 238(GCGGAGCCAGCA,+,0.00),428(GGCGGGCCCCGG,-,0.00),429(GCGGGCCCCGGG,+,0.00) 236(GGGCGGAGCC,+,0.00) 354(CCGAGTAG,-,0.00) 561_WT_peak_6411 chr6 99968858 99969083 + 95 NA promoter-TSS (NM_001195131) promoter-TSS (NM_001195131) 100 NM_001195131 100130890 Hs.634506 NM_001195131 TSTD3 - thiosulfate sulfurtransferase (rhodanese)-like domain containing 3 protein-coding 0.084444 0.685841 -152(GGAGCAGGGCGC,-,0.00),-40(CGCGCAGGGCGG,-,0.00) -26(CTCGGGTCCGCG,-,0.00) -84(CCGCCGGCCCGC,-,0.00) 561_WT_peak_5942 chr5 137878338 137878915 + 95 NA intron (NM_001256302, intron 1 of 10) CpG 363 NM_001291975 2107 Hs.483494 NM_004730 HPRD:02616 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding 0.088388 0.692042 140(GGGCCCGGAGAC,+,0.00),360(GACACCGGCTCC,-,0.00) 314(GCTCCTCCCCGG,+,0.00) -43(GGCGTCCA,-,0.00) 4(CGGACGCG,-,0.00) 220(CCTCTCCTCCCG,-,0.00) 168(TAGCGCCG,-,0.00) 219(CCCTCTCCTCCC,+,0.00) 355(CGTAGGAC,+,0.00) -146(ACCGCGCC,+,0.00),299(TGGGCGGC,-,0.00) 137(GCGGGGCCCGGA,+,0.00),326(CGGCGGCTCCGC,-,0.00),336(GCGGCGGCGGCG,+,0.00) 327(GGCGGCTCCGCG,-,0.00) 126(AGAGCGGCCC,-,0.00),186(AGAGCGGCCC,-,0.00) -158(CTTCTCGG,+,0.00) 170(GCGCCGCCGC,-,0.00),331(GCTCCGCGGC,-,0.00) 129(GCGGCCCGGCGG,+,0.00) 561_WT_peak_426 chr1 144310878 144311380 + 95 NA intron (NR_111953, intron 2 of 3) intron (NR_111953, intron 2 of 3) 29630 NR_109754 728855 Hs.456578 NR_024510 ENSG00000235398 LINC00623 CH17-118O6.2 long intergenic non-protein coding RNA 623 ncRNA 0.017928 0.387674 -78(TAGAGACG,-,0.00) 233(CGGGGAAA,+,0.00) 561_WT_peak_4129 chr2 70351508 70351678 + 95 NA intron (NR_024444, intron 1 of 1) intron (NR_024444, intron 1 of 1) 855 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LOC100133985 - uncharacterized LOC100133985 ncRNA 0.041176 0.508772 -153(GGTTCCGGCTCT,-,0.00) -107(CAAAACAG,+,0.00) 561_WT_peak_1711 chr12 53845636 53845824 + 95 NA promoter-TSS (NM_001128914) promoter-TSS (NM_001128914) -156 NM_001128914 5094 Hs.546271 NM_005016 HPRD:03129 PCBP2 HNRNPE2|HNRPE2|hnRNP-E2 poly(rC) binding protein 2 protein-coding 0.085106 0.629630 -110(CGTCGCTT,+,0.00) 5(CGCCGGCCCCCG,-,0.00) 561_WT_peak_2213 chr14 53575959 53576187 + 95 NA intron (NM_030637, intron 1 of 11) intron (NM_030637, intron 1 of 11) 43973 NM_001160147 80821 Hs.125525 NM_030637 HPRD:07482 DDHD1 PA-PLA1|PAPLA1|SPG28 DDHD domain containing 1 protein-coding 0.004386 0.462882 -123(GCTTCCTGTAGC,-,0.00) 561_WT_peak_7295 chr9 73033954 73034374 + 95 NA Intergenic CpG -4591 NM_001206 687 Hs.150557 NM_001206 HPRD:04211 KLF9 BTEB|BTEB1 Kruppel-like factor 9 protein-coding 0.100000 0.688836 192(CCGGGAGCGCGG,-,0.00),223(CCGGGGGGGAGC,-,0.00) -119(GGGCGGGCGCTC,-,0.00) -162(CCGACCGG,+,0.00) -64(CGCGCGCCCCGG,-,0.00),216(GCGGGGACCGGG,+,0.00) 115(GAACCCGCCC,-,0.00) -97(GCGGACTGGCGG,+,0.00) 561_WT_peak_4812 chr21 43948049 43948230 + 95 NA intron (NM_018964, intron 4 of 20) intron (NM_018964, intron 4 of 20) 28397 NM_018964 54020 Hs.547009 NM_018964 HPRD:10479 SLC37A1 G3PP solute carrier family 37 (glucose-6-phosphate transporter), member 1 protein-coding 0.005525 0.346154 -119(CAAAACAG,+,0.00),-68(CAAAACCA,+,0.00) 561_WT_peak_6486 chr6 137113754 137114004 + 95 NA promoter-TSS (NM_005923) promoter-TSS (NM_005923) -223 NM_005923 4217 Hs.186486 NM_005923 HPRD:03904 MAP3K5 ASK1|MAPKKK5|MEKK5 mitogen-activated protein kinase kinase kinase 5 protein-coding 0.096000 0.681275 -126(GGGCTGGCTCCC,-,0.00),-91(CAGCGGCAGCCG,+,0.00),25(CGGCGCCAGCCT,+,0.00) -87(GGCAGCCGAAAG,+,0.00) 24(CCGGCGCCAGCC,+,0.00) -159(GGTGCGGAGC,+,0.00) -128(GCGGGCTGGCTC,+,0.00) 561_WT_peak_927 chr10 28623256 28623485 + 95 NA Intergenic Intergenic -45091 NR_107053 102465880 NR_107053 MIR8086 hsa-mir-8086 microRNA 8086 ncRNA 0.008734 0.382609 -13(CTGTTTTG,-,0.00) 561_WT_peak_2899 chr16 71879536 71880095 + 95 NA promoter-TSS (NM_001137675) promoter-TSS (NM_001137675) -79 NM_001137675 342371 Hs.743239 NM_001137675 ENSG00000224470 ATXN1L BOAT|BOAT1 ataxin 1-like protein-coding 0.080501 0.691071 241(GGCGGCCGCG,+,0.00) 91(CTCCCTTCCCGG,+,0.00),231(CGGGGATGGCGG,-,0.00) 171(TTGACGCC,+,0.00) 2(GCCCAGCCCT,+,0.00) 153(GCCGGGGG,+,0.00),188(CGCCCGGC,-,0.00) 161(CGGGACGA,-,0.00),264(CGGGACGA,-,0.00) 365(CGGAGGAAGTGG,+,0.00) -14(AGGCTGAGGGGG,-,0.00) 65(GCCCGACG,-,0.00) -2(CCGGGCCCAGCC,+,0.00),224(CCGGGGCCGGGG,+,0.00),334(CCGGGGCCAGGC,+,0.00) 217(GGCGGCTCCGGG,-,0.00),256(GGCGGCTCCGGG,-,0.00) 232(GGGGATGGCGGC,-,0.00),330(GCCGCCGGGGCC,+,0.00) 561_WT_peak_5434 chr4 26320622 26320818 + 95 NA promoter-TSS (NM_005349) promoter-TSS (NM_005349) -612 NM_203283 3516 Hs.479396 NM_005349 HPRD:00920 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding 0.035714 0.451777 -10(CGGGGGGCGCGG,-,0.00) -12(GGCGGGGG,+,0.00) -49(CAAACCCG,+,0.00) -5(GGCGCGGT,-,0.00) 561_WT_peak_6685 chr7 65215837 65215885 + 95 NA promoter-TSS (NR_003110) promoter-TSS (NR_003110) 41 NR_103527 441242 Hs.373941 NM_001013464 LOC441242 - uncharacterized LOC441242 ncRNA 0.020833 0.551020 561_WT_peak_3841 chr19 49309991 49310161 + 95 NA intron (NM_001284325, intron 3 of 11) intron (NM_001284325, intron 3 of 11) 4244 NM_001190 587 Hs.512670 NM_001190 HPRD:00217 BCAT2 BCAM|BCATM|BCT2|PP18 branched chain amino-acid transaminase 2, mitochondrial protein-coding 0.005882 0.538012 561_WT_peak_2781 chr16 30545567 30545777 + 95 NA exon (NM_023931, exon 1 of 2) exon (NM_023931, exon 1 of 2) 522 NM_023931 65988 Hs.592032 NM_023931 ZNF747 - zinc finger protein 747 protein-coding 0.080952 0.720379 -151(TCGGCCTTCTCC,+,0.00) -61(CCGCCTGCCCGG,+,0.00) -14(GGCGCGGC,-,0.00) 561_WT_peak_6235 chr6 28104553 28104964 + 95 NA non-coding (NR_103455, exon 1 of 3) non-coding (NR_103455, exon 1 of 3) 336 NR_103455 100129195 Hs.659413 NR_103455 ENSG00000269293 ZSCAN16-AS1 - ZSCAN16 antisense RNA 1 ncRNA 0.063260 0.618932 76(GCAGCCGGGCCC,-,0.00) -98(AAGTGGCT,+,0.00) 194(TCGACCCC,+,0.00) 173(TCCCGACCCT,+,0.00) 144(CCGCATCTGCCG,-,0.00) 208(CGGCTTTG,-,0.00) 65(CGAGGCTCGGCG,-,0.00) 561_WT_peak_6013 chr5 169706118 169706331 + 95 NA intron (NM_005565, intron 3 of 20) intron (NM_005565, intron 3 of 20) 18598 NM_005565 3937 Hs.304475 NM_005565 LCP2 SLP-76|SLP76 lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa) protein-coding 0.004695 0.560748 -54(AAGCCAGGCCCG,-,0.00) 561_WT_peak_6640 chr7 36764008 36764304 + 95 NA promoter-TSS (NM_001637) promoter-TSS (NM_001637) -2 NM_001637 313 Hs.488007 NM_001637 HPRD:00027 AOAH - acyloxyacyl hydrolase (neutrophil) protein-coding 0.020270 0.451178 -153(CGGTTCTG,-,0.00),45(CAAAACTG,+,0.00) 561_WT_peak_6034 chr5 176784872 176785076 + 95 NA 5' UTR (NM_006480, exon 1 of 15) 5' UTR (NM_006480, exon 1 of 15) 130 NM_006480 10636 Hs.9347 NM_006480 HPRD:03944 RGS14 - regulator of G-protein signaling 14 protein-coding 0.073529 0.702439 -16(AGCGGCAT,-,0.00) -78(TGGCCGGCGCTG,-,0.00) -41(CCCGCGGC,-,0.00) 561_WT_peak_5394-2 chr4 1858426 1858507 + 94 NA promoter-TSS (NM_012318) promoter-TSS (NM_012318) -492 NM_012318 3954 Hs.120165 NM_012318 HPRD:05101 LETM1 - leucine zipper-EF-hand containing transmembrane protein 1 protein-coding 0.123457 0.707317 -107(GGCGTCGG,-,0.00) -115(CGCTGCTCGGCG,-,0.00) -137(GGGCGGCGCT,+,0.00) 561_WT_peak_738 chr1 222828289 222828500 + 94 NA intron (NM_001300867, intron 13 of 22) intron (NM_001300867, intron 13 of 22) 10749 NM_001300867 375056 Hs.118474 NM_198551 ENSG00000154305 MIA3 ARNT|D320|TANGO|TANGO1|UNQ6077 melanoma inhibitory activity family, member 3 protein-coding 0.014218 0.448113 561_WT_peak_2379 chr14 102828978 102829164 + 94 NA promoter-TSS (NM_014844) promoter-TSS (NM_014844) 182 NM_032630 51550 Hs.129634 NM_032630 HPRD:16715 CINP - cyclin-dependent kinase 2 interacting protein protein-coding 0.048387 0.593583 -118(AGGCTGCGAGGG,-,0.00) -145(CAAAACTG,+,0.00) -111(GAGGGGCCTGCG,+,0.00) -116(GCTGCGAGGG,+,0.00) 561_WT_peak_1355 chr11 65193385 65193389 + 94 NA non-coding (NR_028272, exon 1 of 1) non-coding (NR_028272, exon 1 of 1) 3118 NR_028272 283131 Hs.523789 NR_002802 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA 0.000000 0.200000 561_WT_peak_1349 chr11 65189359 65189561 + 94 NA promoter-TSS (NR_028272) promoter-TSS (NR_028272) -809 NR_028272 283131 Hs.523789 NR_002802 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA 0.054455 0.536946 -2(CAAAACCA,+,0.00) 561_WT_peak_5550 chr4 90224368 90224624 + 94 NA intron (NM_198281, intron 1 of 1) intron (NM_198281, intron 1 of 1) 4665 NM_198281 285513 Hs.605082 NM_198281 GPRIN3 GRIN3 GPRIN family member 3 protein-coding 0.023438 0.424125 561_WT_peak_5443 chr4 37930777 37930972 + 94 NA intron (NM_001253912, intron 2 of 20) intron (NM_001253912, intron 2 of 20) -31182 NM_006607 10744 Hs.668806 NM_006607 HPRD:09176 PTTG2 - pituitary tumor-transforming 2 protein-coding 0.000000 0.316327 561_WT_peak_3157 chr17 37778331 37778527 + 94 NA Intergenic Intergenic -4748 NM_032192 84152 Hs.286192 NM_032192 HPRD:05097 PPP1R1B DARPP-32|DARPP32 protein phosphatase 1, regulatory (inhibitor) subunit 1B protein-coding 0.056122 0.598985 -54(GGACTGAGAGAG,-,0.00) -65(CCAAACCG,+,0.00) 561_WT_peak_1658 chr12 42693829 42694003 + 94 NA Intergenic Intergenic 26016 NM_033114 85437 Hs.496279 NM_033114 HPRD:14344 ZCRB1 MADP-1|MADP1|RBM36|SNRNP31|ZCCHC19 zinc finger CCHC-type and RNA binding motif 1 protein-coding 0.000000 0.440000 561_WT_peak_3825 chr19 48111510 48111830 + 94 NA intron (NM_015711, intron 1 of 14) CpG 217 NM_015711 29998 Hs.97244 NM_015711 HPRD:09296 GLTSCR1 - glioma tumor suppressor candidate region gene 1 protein-coding 0.112500 0.722741 139(CTGGGAGCGCGG,-,0.00) 11(TCGACTCC,+,0.00) 64(CGCCGGAC,+,0.00) -45(GGCGCGGT,-,0.00) -164(GCCGCCGTGGCT,+,0.00) 561_WT_peak_3810 chr19 46273671 46273796 + 94 NA 3' UTR (NM_001288766, exon 13 of 13) 3' UTR (NM_001288766, exon 13 of 13) -1236 NM_175875 147912 Hs.43314 NM_175875 HPRD:09024 SIX5 BOR2|DMAHP SIX homeobox 5 protein-coding 0.104000 0.714286 -118(GGCCCCGGAGTC,+,0.00) -88(CAGGGAGCGCGG,-,0.00) -112(GGAGTCGA,-,0.00) -163(GGCGCGGC,-,0.00),-68(TGGGCGGC,-,0.00) -65(GCGGCGCCAGAC,+,0.00) -123(AACGGGGCCC,-,0.00),-67(GGGCGGCGCC,+,0.00) 561_WT_peak_5394 chr4 1857931 1858308 + 94 NA promoter-TSS (NM_012318) promoter-TSS (NM_012318) -145 NM_012318 3954 Hs.120165 NM_012318 HPRD:05101 LETM1 - leucine zipper-EF-hand containing transmembrane protein 1 protein-coding 0.129973 0.716931 39(GACGCCGGGGCT,-,0.00) 184(AAACGGCT,+,0.00) 37(TGGACGCC,+,0.00) 29(TCGTACCG,+,0.00) -57(CGGCGGAC,+,0.00),27(CGTCGTAC,+,0.00) 14(GCATCCTGGTTC,-,0.00) -146(ACCGCGCC,+,0.00),93(TGCGCGGG,-,0.00) -144(CGCGCCACCGCG,-,0.00) 56(CGTGGCGG,+,0.00) 47(GGCTCGCAGC,-,0.00) 561_WT_peak_2948 chr16 88877942 88878257 + 94 NA intron (NM_001030018, intron 1 of 4) CpG-9751 243 NM_000485 353 Hs.28914 NM_000485 HPRD:00029 APRT AMP|APRTD adenine phosphoribosyltransferase protein-coding 0.120635 0.740506 38(CCGCCCGCCCGG,+,0.00) -1(AGGGCAGGGC,-,0.00) 95(CGCCACGA,-,0.00) -13(CGGGGCCGAAGG,+,0.00) 54(CGCGGGCCACGC,-,0.00) -93(GCCGATGGCGGC,-,0.00) 561_WT_peak_2639 chr16 279377 279589 + 94 NA promoter-TSS (NM_018032) promoter-TSS (NM_018032) -34 NM_018032 55692 Hs.16803 NM_018032 HPRD:08476 LUC7L LUC7-LIKE|LUC7B1|Luc7|SR+89|hLuc7B1 LUC7-like (S. cerevisiae) protein-coding 0.113208 0.657277 -141(GGCGTCGA,-,0.00),-116(GGCCTCGA,-,0.00) -89(GCCGCGGG,+,0.00) -120(CGTCGGCC,+,0.00),-66(GTACGACG,-,0.00),23(GTCCAACG,-,0.00) -152(GCGGTGGCAGCG,+,0.00) 561_WT_peak_4661 chr20 47377160 47377368 + 94 NA intron (NM_020820, intron 1 of 39) L2b|LINE|L2 67156 NM_020820 57580 Hs.153310 NM_020820 HPRD:06066 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding 0.019231 0.555024 561_WT_peak_3024 chr17 7760509 7760749 + 94 NA promoter-TSS (NM_144607) promoter-TSS (NM_144607) -435 NM_144607 124637 Hs.27475 NM_144607 HPRD:13408 CYB5D1 - cytochrome b5 domain containing 1 protein-coding 0.066667 0.663900 -155(TGCGCGGG,-,0.00),-130(ACCGCGCA,+,0.00) -90(CCGGCAGCCCGC,-,0.00) 561_WT_peak_61 chr1 11779772 11780026 + 94 NA 3' UTR (NM_198545, exon 7 of 7) 3' UTR (NM_198545, exon 7 of 7) -16243 NM_001040196 57085 Hs.464438 NM_020350 HPRD:16379 AGTRAP ATRAP angiotensin II receptor-associated protein protein-coding 0.059055 0.635294 40(CCTCCATCCCGC,+,0.00) -139(GCCGGGCG,+,0.00) -6(GAGCCGGCCCGC,-,0.00) 561_WT_peak_4176 chr2 86333365 86333580 + 94 NA promoter-TSS (NM_015425) promoter-TSS (NM_015425) 167 NM_017952 55037 Hs.323489 NM_017952 HPRD:08631 PTCD3 MRP-S39 pentatricopeptide repeat domain 3 protein-coding 0.074419 0.592593 -49(AGACGCTT,-,0.00) 24(AGGCACGA,-,0.00) -85(CGGGTTTG,-,0.00) -88(GGGCGGGTTT,+,0.00) -34(CCGCGAAG,-,0.00) -126(CCTCCGCAGC,-,0.00) 561_WT_peak_2287 chr14 74724347 74724517 + 94 NA intron (NM_182894, intron 3 of 4) CpG 18257 NM_182894 338917 Hs.449771 NM_182894 HPRD:08852 VSX2 CHX10|HOX10|MCOP2|MCOPCB3|RET1 visual system homeobox 2 protein-coding 0.129412 0.719298 -158(GCCGGGCG,+,0.00) -24(CGGCGCGA,-,0.00) -123(GGGAACCGCAGG,+,0.00) -73(CGCCGGCCCCAG,-,0.00) 561_WT_peak_2421 chr15 34659608 34660303 + 94 NA promoter-TSS (NM_153613) promoter-TSS (NM_153613) -560 NM_153613 254531 Hs.352614 NM_153613 HPRD:08315 LPCAT4 AGPAT7|AYTL3|LPAAT-eta|LPEAT2 lysophosphatidylcholine acyltransferase 4 protein-coding 0.060432 0.623563 3(TGGGCCGGATGC,+,0.00) 160(TGGCGGCT,+,0.00) -66(GGCGTCGA,-,0.00) -81(CTCTGTCCCCGC,-,0.00) 78(CGCGCCTCCTCG,-,0.00) 217(GGGCCGCCTT,+,0.00) -133(CCGCCTCG,-,0.00),303(CCGACAAG,-,0.00) 122(GGCGCCATCGCG,+,0.00) 196(GCGTCCTGCCTG,+,0.00) 561_WT_peak_138 chr1 28240888 28241364 + 94 NA 5' UTR (NM_002946, exon 1 of 9) 5' UTR (NM_002946, exon 1 of 9) 182 NM_001297558 6118 Hs.79411 NM_002946 HPRD:01566 RPA2 REPA2|RP-A p32|RP-A p34|RPA32 replication protein A2, 32kDa protein-coding 0.081933 0.589099 -28(CGCGGCCGCC,-,0.00) 131(CGCGTACT,+,0.00) 187(CAAAACCC,+,0.00) -30(AACGCGGCCG,-,0.00) -71(CCGAGAAG,-,0.00),264(CCGCGACG,-,0.00) 561_WT_peak_6639 chr7 35840844 35841069 + 94 NA promoter-TSS (NR_120511) promoter-TSS (NR_120511) 360 NM_001011553 989 Hs.191346 NM_001788 SEPT7 CDC10|CDC3|NBLA02942|SEPT7A septin 7 protein-coding 0.111111 0.747788 -5(CCGGGATGGGGG,-,0.00) -26(CGGAGGCAGCGG,+,0.00) 22(GGCGCGGC,-,0.00) -27(GCGGAGGCAGCG,+,0.00),12(GCGGGCCCGGGG,+,0.00) -31(CGAGGCGG,+,0.00) -79(GCCGGGAAGC,+,0.00) 561_WT_peak_7204 chr9 4971345 4971594 + 94 NA Intergenic LTR16B1|LTR|ERVL -13776 NM_004972 3717 Hs.656213 NM_004972 HPRD:00993 JAK2 JTK10|THCYT3 Janus kinase 2 protein-coding 0.012048 0.428000 -65(GCAGCCATGGAG,+,0.00) 561_WT_peak_5107 chr3 49377521 49378077 + 94 NA promoter-TSS (NM_199443) promoter-TSS (NM_199443) -263 NM_003363 7375 Hs.77500 NM_003363 HPRD:04598 USP4 UNP|Unph ubiquitin specific peptidase 4 (proto-oncogene) protein-coding 0.080935 0.642729 -140(GCCCGCCCCT,+,0.00) -122(TCGAGCCG,+,0.00) -111(CCTTCGGCTCCT,-,0.00) 31(CTACGCGG,+,0.00) 561_WT_peak_5408 chr4 6857380 6857761 + 94 NA intron (NM_001100590, intron 3 of 8) intron (NM_001100590, intron 3 of 8) -53601 NM_001113361 57533 Hs.518611 NM_020773 HPRD:11623 TBC1D14 - TBC1 domain family, member 14 protein-coding 0.015748 0.410995 561_WT_peak_1355-2 chr11 65193433 65193698 + 94 NA non-coding (NR_028272, exon 1 of 1) non-coding (NR_028272, exon 1 of 1) 3296 NR_028272 283131 Hs.523789 NR_002802 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA 0.011321 0.398496 561_WT_peak_6558 chr6 170615867 170616080 + 94 NA intron (NM_001286381, intron 1 of 8) CpG 163 NM_032448 84498 Hs.369522 NM_032448 HPRD:11165 FAM120B CCPG|KIAA1838|PGCC1|dJ894D12.1 family with sequence similarity 120B protein-coding 0.126761 0.738318 -71(TCTTCCGGGCCG,-,0.00) -159(AGGCGGCT,+,0.00) -15(GCGCGTCAGCCC,+,0.00) -31(CGCGTCCG,+,0.00) -98(AGGGCCGGGC,-,0.00) -29(CGTCCGAC,+,0.00),-28(GTCCGACC,-,0.00) -37(GTTACCCG,-,0.00) -65(GGGCCGCTCC,+,0.00) -56(CCGGCCTGCGTG,+,0.00) 561_WT_peak_928 chr10 28624251 28624437 + 94 NA Intergenic MLT1F|LTR|ERVL-MaLR -46065 NR_107053 102465880 NR_107053 MIR8086 hsa-mir-8086 microRNA 8086 ncRNA 0.010753 0.443850 -122(AGCCACAT,-,0.00) 1(CAAAACAG,+,0.00) 561_WT_peak_652 chr1 184129429 184129789 + 94 NA Intergenic MLT1H|LTR|ERVL-MaLR 108824 NR_125335 116461 Hs.548197 NM_052965 HPRD:12292 TSEN15 C1orf19|sen15 TSEN15 tRNA splicing endonuclease subunit protein-coding 0.005556 0.426593 0(TGGTTTTG,-,0.00) 561_WT_peak_1863 chr12 112568307 112568596 + 94 NA intron (NM_001143906, intron 2 of 11) intron (NM_001143906, intron 2 of 11) 5102 NM_006700 10906 Hs.5148 NM_006700 HPRD:10994 TRAFD1 FLN29 TRAF-type zinc finger domain containing 1 protein-coding 0.006920 0.368966 561_WT_peak_1161 chr10 124739715 124740137 + 94 NA 5' UTR (NM_153336, exon 1 of 7) 5' UTR (NM_153336, exon 1 of 7) 370 NM_153336 118672 Hs.281004 NM_153336 HPRD:16586 PSTK C10orf89 phosphoseryl-tRNA kinase protein-coding 0.097156 0.666667 141(GGAACCGGCAGC,+,0.00) 32(GGCGGCGGAG,+,0.00) 170(AGGCCTCT,+,0.00) 100(CGGTCTCCCCGG,+,0.00) 48(CGCGTGCG,+,0.00),50(CGTGCGCG,-,0.00) 195(CCCGCGGC,-,0.00) 199(CGGCAGGA,-,0.00) 149(CAGCGACG,-,0.00) -20(CTCTGGGGCCGC,-,0.00) -86(CGCAGCGCCGCG,+,0.00),-86(CGCAGCGCCGCG,-,0.00) 561_WT_peak_3490 chr18 42339258 42339460 + 94 NA intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 78496 NM_015559 26040 Hs.435458 NM_015559 HPRD:10224 SETBP1 SEB SET binding protein 1 protein-coding 0.024752 0.438424 -38(CTTTCCGGGTCT,-,0.00) -125(TCTGCGAAGC,+,0.00) 561_WT_peak_4229 chr2 98335067 98335266 + 94 NA intron (NM_001079, intron 2 of 13) intron (NM_001079, intron 2 of 13) 5135 NM_001079 7535 Hs.234569 NM_001079 HPRD:01495 ZAP70 SRK|STCD|STD|TZK|ZAP-70 zeta-chain (TCR) associated protein kinase 70kDa protein-coding 0.020101 0.620000 561_WT_peak_5362 chr3 192610963 192611293 + 94 NA intron (NM_178496, intron 1 of 1) intron (NM_178496, intron 1 of 1) 24822 NM_178496 151963 Hs.151443 NM_178496 HPRD:14092 MB21D2 C3orf59 Mab-21 domain containing 2 protein-coding 0.021212 0.432024 42(AGGTTTTG,-,0.00) 561_WT_peak_484 chr1 149294559 149294841 + 94 NA Intergenic tRNA-Gly-GGG|tRNA|tRNA 7249 NR_111934 644634 Hs.723057 NR_111934 FAM231D - family with sequence similarity 231, member D ncRNA 0.028369 0.484099 77(AGCGGCCT,-,0.00) -94(AGGGTAAA,+,0.00) 561_WT_peak_1240 chr11 32112847 32113359 + 94 NA intron (NM_002901, intron 1 of 5) CpG 626 NM_002901 5954 Hs.97887 NM_002901 HPRD:04111 RCN1 HEL-S-84|PIG20|RCAL|RCN reticulocalbin 1, EF-hand calcium binding domain protein-coding 0.099609 0.703704 -140(GGAGCTGGGCGA,-,0.00) 213(GCGGGGAGGCGA,-,0.00) 95(GGCCTCGA,-,0.00),178(TCGCCGCC,+,0.00) 125(GCGCTGGGGCTC,-,0.00),258(GAGGGCCCGCCC,+,0.00) 238(GCCGCGGG,+,0.00) -151(CGGCCCGA,-,0.00) 26(GTCCGAGG,-,0.00) 186(GCCGCGCC,+,0.00) -137(GCTGGGCGAGCG,+,0.00),-8(CCGCGGCCAGGG,+,0.00),179(CGCCGCCGCCGC,-,0.00) 119(AACTCGGCGC,-,0.00) -147(CCGACTCG,-,0.00),-146(CGACTCGG,+,0.00) -6(GCGGCCAGGGCC,+,0.00),-4(GGCCAGGGCCCC,-,0.00),34(GCCGCCTGGGCG,+,0.00) 561_WT_peak_5547 chr4 89377972 89378375 + 94 NA promoter-TSS (NM_016323) promoter-TSS (NM_016323) -95 NM_016323 51191 Hs.26663 NM_016323 HPRD:10502 HERC5 CEB1|CEBP1 HECT and RLD domain containing E3 ubiquitin protein ligase 5 protein-coding 0.074442 0.621287 155(CCGACGCC,+,0.00) 122(CGGCAGGGGCTC,-,0.00) -49(TTTACCCC,-,0.00) 79(TGCAGGCCCCGC,-,0.00) 164(CGCAGCTGCGCG,-,0.00) 160(GCCACGCAGC,-,0.00),188(GCTCTGCAGC,-,0.00) 561_WT_peak_5382 chr4 124686 124859 + 94 NA 5' UTR (NM_001289930, exon 1 of 2) 5' UTR (NM_001289930, exon 1 of 2) 414 NM_001289930 255403 Hs.636638 NM_001039127 ZNF718 - zinc finger protein 718 protein-coding 0.086705 0.701149 -77(TTTCCCCG,-,0.00) -23(TGCGCGGT,-,0.00) -131(CTCTGGCCCAGC,-,0.00),-20(GCGGTGCCGGCG,+,0.00) -29(GCGGCCTGCGCG,+,0.00) 561_WT_peak_1572 chr12 8142692 8142882 + 94 NA Intergenic Intergenic -42572 NM_018416 55810 Hs.120844 NM_018416 HPRD:17014 FOXJ2 FHX forkhead box J2 protein-coding 0.026316 0.523560 -64(TGGTGCCG,+,0.00) -60(GCCGCCCA,+,0.00) 561_WT_peak_2991 chr17 4618342 4618562 + 93 NA intron (NM_001257329, intron 2 of 14) intron (NM_001257329, intron 2 of 14) 4663 NM_001257328 409 Hs.435811 NM_004313 HPRD:00147 ARRB2 ARB2|ARR2|BARR2 arrestin, beta 2 protein-coding 0.018182 0.624434 28(GGGCTGGGTGGG,-,0.00) 561_WT_peak_5103 chr3 49058702 49058937 + 93 NA promoter-TSS (NM_018114) promoter-TSS (NM_018114) 201 NM_199073 25915 Hs.31387 NM_199069 NDUFAF3 2P1|C3orf60|E3-3 NADH dehydrogenase (ubiquinone) complex I, assembly factor 3 protein-coding 0.085106 0.644068 -155(GCGTGCCG,+,0.00) -129(CGGGGGCCAGCG,+,0.00) 561_WT_peak_5128 chr3 53925422 53925808 + 93 NA intron (NM_021237, intron 1 of 4) CpG 374 NM_021237 58515 Hs.58471 NM_021237 HPRD:07448 SELK HSPC297|SelK selenoprotein K protein-coding 0.103627 0.625323 66(GACTTCGGTCCA,-,0.00) 10(CTCGGCCCCC,-,0.00) 183(TCGAAGCC,+,0.00) 82(CGCCCGGC,-,0.00),88(GCCGCGGG,+,0.00) -45(CTGCACGA,-,0.00) 137(GAGCGACG,-,0.00) 8(ACCTCGGCCC,-,0.00),77(AGCTCCGCCC,-,0.00) 88(GCCGCGGGGC,+,0.00) 81(CCGCCCGGCCGC,-,0.00) 561_WT_peak_2003 chr13 41495777 41496198 + 93 NA promoter-TSS (NR_003365) promoter-TSS (NR_003365) -77 NR_003365 283507 Hs.442781 NR_003365 ENSG00000239827 SUGT1P3 SUGT1L1 SUGT1 pseudogene 3 pseudo 0.097387 0.642180 164(CGTCCGCG,-,0.00),243(CGTGTACG,+,0.00),245(TGTACGCG,-,0.00) -88(CCGACCAA,+,0.00),178(CCGACCGA,+,0.00) 53(TCCTCCCAGCCC,+,0.00) 154(ACCGCGCC,+,0.00) 89(CCCAGTCCCCGC,-,0.00) 67(AACCCGGCCC,-,0.00) -105(GCTCAGCAGC,-,0.00),-22(GCCACGCAGC,-,0.00) -24(CAGCCACGCAGC,-,0.00) 561_WT_peak_451 chr1 145928700 145928897 + 93 NA intron (NR_111936, intron 7 of 9).2 intron (NR_111936, intron 7 of 9).2 16679 NR_111936 100034743 Hs.696575 NR_003377 ENSG00000215860 PDZK1P2 OTTHUMT00000038524|PDZK1P1 PDZ domain containing 1 pseudogene 2 pseudo 0.015228 0.434343 561_WT_peak_900 chr10 17271466 17271996 + 93 NA exon (NM_003380, exon 2 of 10) exon (NM_003380, exon 2 of 10) 253 NR_108061 100507347 Hs.740502 NR_108060 VIM-AS1 - VIM antisense RNA 1 ncRNA 0.107547 0.677966 -144(GCCGGCCGAG,+,0.00) -48(CCTCGTCCCCGG,+,0.00),7(CAGCGTGCCCGG,+,0.00) -54(TCTACGCC,+,0.00),57(CCGACGCC,+,0.00),299(CGCGTCGA,-,0.00) -137(GAGCTCCAGCCG,+,0.00),-71(CAGCACCAGCCG,+,0.00) -143(CCGGCCGA,+,0.00) 55(GGCCGACG,-,0.00) 67(CAACACCG,+,0.00) 0(TGCGGAGCAGCG,+,0.00) 298(CCGCGTCG,-,0.00) -2(CCTGCGGAGC,+,0.00) 561_WT_peak_539 chr1 154192874 154193213 + 93 NA promoter-TSS (NM_001287815) promoter-TSS (NM_001287815) 230 NM_001297723 25912 Hs.287471 NM_015449 HPRD:16636 C1orf43 NICE-3|NS5ATP4|S863-3 chromosome 1 open reading frame 43 protein-coding 0.091445 0.658824 30(ACGACGCC,+,0.00),86(AGCGTCGA,-,0.00) -83(AAGCGACG,-,0.00) -123(TTTACCCC,-,0.00) 118(GTAAGAGGAAGC,+,0.00) -97(CCCAGGCTCCGC,-,0.00) -162(GACGCCATGGCC,+,0.00),-160(CGCCATGGCCTC,-,0.00) 561_WT_peak_3739 chr19 36980087 36980605 + 93 NA promoter-TSS (NM_032838) promoter-TSS (NM_032838) -9 NM_032838 84924 Hs.533939 NM_032838 HPRD:15847 ZNF566 - zinc finger protein 566 protein-coding 0.073359 0.606936 99(GCCCCGCCCT,+,0.00) 93(CCCCCGGC,-,0.00) 246(TCTTGCCG,+,0.00) 77(CAAAGCCG,+,0.00) 181(CTGGTAAA,+,0.00) 94(CCCCGGCCCCGC,-,0.00) 561_WT_peak_871 chr10 6634069 6634273 + 93 NA Intergenic Intergenic 11784 NR_036502 439949 Hs.13262 NR_036502 PRKCQ-AS1 - PRKCQ antisense RNA 1 ncRNA 0.000000 0.365854 -63(AGGTGGCT,+,0.00) -130(CCTTCTGCTCAC,-,0.00) 561_WT_peak_5519 chr4 83350344 83350694 + 93 NA exon (NM_001207000, exon 1 of 7) exon (NM_001207000, exon 1 of 7) 859 NM_031372 9987 Hs.527105 NM_005463 HPRD:06185 HNRNPDL HNRNP|HNRPDL|JKTBP|JKTBP2|laAUF1 heterogeneous nuclear ribonucleoprotein D-like protein-coding 0.120000 0.678063 -142(GGGGGAGGGGGA,-,0.00) 36(GGCGGCGGAG,+,0.00) 3(GTGCTGGCGCGC,-,0.00) -157(CGCGTGCG,+,0.00) -126(GGGAAGAAGCGT,+,0.00),26(CGGCAGCAGCGG,+,0.00) -22(TAGTGACG,-,0.00) 145(TGGGCGGT,-,0.00) 90(GCGCCGCCTGCG,+,0.00),160(CGCTGGGCCCGG,-,0.00) 37(GCGGCGGAGC,+,0.00) 561_WT_peak_2901 chr16 72127816 72128038 + 93 NA promoter-TSS (NM_001142317) promoter-TSS (NM_001142317) -159 NM_001142317 54957 Hs.134406 NM_017853 HPRD:11655 TXNL4B DLP|Dim2 thioredoxin-like 4B protein-coding 0.054054 0.596413 14(TGGCGGCT,+,0.00) -87(GCAGCGCCGGCG,+,0.00),-83(CGCCGGCGCCCC,-,0.00) -142(TGGCCGCTTT,+,0.00) 22(CTAGGCGG,+,0.00) 561_WT_peak_29 chr1 3816940 3817689 + 93 NA promoter-TSS (NM_207356) promoter-TSS (NM_207356) 346 NR_024455 100133612 Hs.307652 NR_024455 ENSG00000236423 LINC01134 - long intergenic non-protein coding RNA 1134 ncRNA 0.060080 0.625333 429(GCAGGAGGGCGG,-,0.00) -70(TAGCCGCT,+,0.00),-69(AGCCGCTA,-,0.00),150(AAGCCTCT,+,0.00),280(AAGCCTCT,+,0.00),489(AGCGGCCT,-,0.00) 370(AGGGGCGGGC,-,0.00) 553(TGCGCGCT,-,0.00) 541(GCTGGGGAGC,+,0.00) 561_WT_peak_5412 chr4 8442212 8442508 + 93 NA promoter-TSS (NM_152544) promoter-TSS (NM_152544) 92 NM_001101667 8310 Hs.479122 NM_003501 HPRD:04552 ACOX3 - acyl-CoA oxidase 3, pristanoyl protein-coding 0.054054 0.525253 -144(ACTTAGGCTCCC,-,0.00) 110(GCCGCGCC,+,0.00) -86(GCTGGCTGGCTG,+,0.00) 561_WT_peak_7278 chr9 67926427 67926600 + 93 NA promoter-TSS (NM_032250) promoter-TSS (NM_032250) -248 NM_032250 84210 Hs.632671 NM_032250 HPRD:10649 ANKRD20A1 ANKRD20A ankyrin repeat domain 20 family, member A1 protein-coding 0.132948 0.752874 -77(CCGGGAGCCCGG,-,0.00) -122(GAGCTGCAGCCC,+,0.00) -97(GCGCCGCCAGGG,+,0.00) -95(GCCGCCAGGGAG,+,0.00) -18(GCTCGGCAGC,-,0.00) 561_WT_peak_765 chr1 228327329 228327619 + 93 NA promoter-TSS (NM_001242839) promoter-TSS (NM_001242839) -311 NM_001242839 2987 Hs.376933 NM_000858 HPRD:00755 GUK1 GMK guanylate kinase 1 protein-coding 0.062069 0.560137 102(GGAGGAGGCGGG,-,0.00) -79(CGGTCCTCCCGG,+,0.00) -26(CGCCCGGC,-,0.00) 16(CGGTTTGG,-,0.00) 561_WT_peak_994 chr10 52384255 52384631 + 93 NA promoter-TSS (NM_147156) promoter-TSS (NM_147156) -706 NM_147156 259230 Hs.654698 NM_147156 HPRD:18203 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding 0.117021 0.713528 -157(AAGCCTCT,+,0.00),-13(AGCGGCTA,-,0.00) -148(GCGACGCC,+,0.00) 72(CCGAGCGA,+,0.00) -150(TGGCGACG,-,0.00) 9(CCCGCGCA,+,0.00) -80(AGAGCCGCCC,-,0.00) 561_WT_peak_6978 chr8 37749450 37749858 + 93 NA intron (NM_001002814, intron 1 of 5) L2a|LINE|L2 7361 NM_025151 80223 Hs.191179 NM_025151 HPRD:09787 RAB11FIP1 NOEL1A|RCP|rab11-FIP1 RAB11 family interacting protein 1 (class I) protein-coding 0.002451 0.452323 149(AGGTGGCT,+,0.00) 57(CCCTCTCACCCT,+,0.00) -9(ACTTCCTGGTTC,-,0.00) 561_WT_peak_2756 chr16 28857568 28857902 + 93 NA promoter-TSS (NM_003321) promoter-TSS (NM_003321) -6 NM_003321 7284 Hs.12084 NM_003321 HPRD:03861 TUFM COXPD4|EF-TuMT|EFTU|P43 Tu translation elongation factor, mitochondrial protein-coding 0.095808 0.665672 -136(CGCCCCGGTAAC,+,0.00) -16(AGCCGCCA,-,0.00) -125(CCGGGGAGCCGG,-,0.00) -45(GAGCTGGGAGGG,-,0.00),2(CCGTCTCAGCCG,+,0.00),105(GGGCTGAGGGGC,-,0.00) 15(CGTCGGGC,+,0.00) -124(CGGGGAGCCGGG,+,0.00) 561_WT_peak_2600 chr15 90437199 90437701 + 93 NA non-coding (NR_023361, exon 1 of 7) non-coding (NR_023361, exon 1 of 7) 167 NR_023361 10239 Hs.632161 NM_005829 HPRD:03880 AP3S2 AP3S3|sigma3b adaptor-related protein complex 3, sigma 2 subunit protein-coding 0.089641 0.600398 75(CAGACCGA,+,0.00) -137(CTCCTCCTTCCG,-,0.00) 77(GACCGACG,-,0.00) 124(CAAAACGG,+,0.00),249(CGGTTATG,-,0.00) -75(AACTTGGCCC,-,0.00) 561_WT_peak_678 chr1 201798261 201798514 + 93 NA promoter-TSS (NM_018085) promoter-TSS (NM_018085) 99 NM_018085 55705 Hs.596014 NM_018085 HPRD:17154 IPO9 Imp9 importin 9 protein-coding 0.102767 0.685039 -52(GCTGCCGGGTCC,-,0.00) -113(GGGCTGGCGGGC,-,0.00) -119(GCCGCGGG,+,0.00) -105(GGGCTGAGGGGA,-,0.00) -116(GCGGGGCTGGCG,+,0.00),-84(GCGGCGGCGGCG,+,0.00) -119(GCCGCGGGGC,+,0.00) 561_WT_peak_4751 chr21 17102302 17102486 + 93 NA promoter-TSS (NM_001283042) promoter-TSS (NM_001283042) 50 NM_001283041 29761 Hs.743994 NM_013396 HPRD:05296 USP25 USP21 ubiquitin specific peptidase 25 protein-coding 0.168478 0.772973 -112(CGGACCGGCAGC,+,0.00) -160(GGGCGGCCGCTC,-,0.00),-67(TGGCTCGCGCTC,-,0.00) -89(CGAACGCG,-,0.00),-12(CGCGGACG,+,0.00) -76(CCGCCCGA,+,0.00) -154(CCGCTCCCTCCG,-,0.00) -123(AAAGCAGCCC,-,0.00),-80(GACGCCGCCC,-,0.00),10(GGGCCGCGTG,+,0.00) 5(GAGGCGGGCCGC,-,0.00) 561_WT_peak_3346 chr17 73851558 73851760 + 93 NA promoter-TSS (NM_012478) promoter-TSS (NM_012478) -158 NM_012478 23558 Hs.514489 NM_012478 HPRD:06097 WBP2 WBP-2 WW domain binding protein 2 protein-coding 0.044554 0.536946 -16(AATCGGCT,+,0.00) -119(CCCCCGCAGC,-,0.00) 561_WT_peak_4731 chr20 62766703 62766956 + 93 NA Intergenic Intergenic -28645 NM_005286 2832 Hs.248118 NM_005286 NPBWR2 GPR8 neuropeptides B/W receptor 2 protein-coding 0.039526 0.496063 -151(CAGTTTTG,-,0.00),-85(CAGTTTTG,-,0.00),-19(CAGTTTTG,-,0.00),14(CAGTTTTG,-,0.00),43(CAGTTTTG,-,0.00),76(CAGTTTTG,-,0.00) 561_WT_peak_1313 chr11 61792930 61793411 + 93 NA Intergenic Intergenic -58038 NM_002032 2495 Hs.524910 NM_002032 HPRD:00615 FTH1 FHC|FTH|FTHL6|HFE5|PIG15|PLIF ferritin, heavy polypeptide 1 protein-coding 0.022869 0.481328 220(GTTTTCGGTCCG,-,0.00) 82(CACGTACG,+,0.00),84(CGTACGGG,-,0.00) 224(TCGGTCCG,-,0.00) -5(CAAAACAG,+,0.00),211(CAAAACCA,+,0.00) 177(AAAGCGGCCG,-,0.00) 561_WT_peak_2801 chr16 31885894 31886158 + 93 NA intron (NR_049749, intron 1 of 4) MER57E3|LTR|ERV1 947 NM_001265588 10308 Hs.460645 NM_003414 HPRD:06883 ZNF267 HZF2 zinc finger protein 267 protein-coding 0.022727 0.426415 -58(AACCACTT,-,0.00) -96(TGGTTTTG,-,0.00) 561_WT_peak_664 chr1 193028389 193028663 + 93 NA promoter-TSS (NM_001199263) promoter-TSS (NM_001199263) -3 NM_001199262 51377 Hs.145469 NM_015984 HPRD:10293 UCHL5 CGI-70|INO80R|UCH-L5|UCH37 ubiquitin carboxyl-terminal hydrolase L5 protein-coding 0.094891 0.676364 83(GGGCTGGGGCCT,-,0.00) -81(CAAACCCG,+,0.00) 54(GCCTTGCAGC,-,0.00) 561_WT_peak_5327 chr3 172309954 172310353 + 93 NA Intergenic L1PREC2|LINE|L1 -68856 NM_001190942 8743 Hs.478275 NM_003810 HPRD:04670 TNFSF10 APO2L|Apo-2L|CD253|TL2|TRAIL tumor necrosis factor (ligand) superfamily, member 10 protein-coding 0.012531 0.540000 101(GCTGCGGTGC,+,0.00) 561_WT_peak_3593 chr19 5903731 5903950 + 93 NA non-coding (NR_034166, exon 1 of 5) non-coding (NR_034166, exon 1 of 5) 184 NM_175614 126328 Hs.406062 NM_175614 HPRD:14818 NDUFA11 B14.7|CI-B14.7 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa protein-coding 0.127854 0.668182 -62(CGGGCCGGCAAC,+,0.00) -6(CGCGCACG,+,0.00),-4(CGCACGCG,-,0.00) -96(CTTCTCGG,+,0.00) 561_WT_peak_3752 chr19 38704894 38705182 + 93 NA intron (NM_001135155, intron 9 of 11) intron (NM_001135155, intron 9 of 11) 9852 NM_001289978 8193 Hs.631576 NM_004647 HPRD:03393 DPF1 BAF45b|NEUD4|neuro-d4 D4, zinc and double PHD fingers family 1 protein-coding 0.034722 0.550173 -81(AGCCGCTA,-,0.00) -128(CAGCGCCAGGCT,+,0.00) -158(CAAAACTG,+,0.00) -61(ACCCATGGCGCC,-,0.00) -103(GCCCCGCTGC,-,0.00) 561_WT_peak_7516 chrX 24167609 24167789 + 93 NA promoter-TSS (NM_003410) promoter-TSS (NM_003410) -63 NM_001178086 7543 Hs.336681 NM_003410 HPRD:02445 ZFX ZNF926 zinc finger protein, X-linked protein-coding 0.111111 0.734807 -96(GGAGGAGGGGGC,-,0.00) -132(GGCGCCGA,-,0.00) -17(CCGTGCCG,+,0.00) -145(GCGGGGCGGGAG,+,0.00) -2(GGGCCGCTTT,+,0.00) -128(CCGACACG,-,0.00) 561_WT_peak_2671 chr16 3314685 3315002 + 93 NA non-coding (NR_033904, exon 1 of 2) non-coding (NR_033904, exon 1 of 2) 1075 NR_033904 283876 Hs.592092 NR_033904 ENSG00000006194 LINC00921 - long intergenic non-protein coding RNA 921 ncRNA 0.066246 0.559748 -88(CCCGCGGC,-,0.00) -44(CAAAACCC,+,0.00) 561_WT_peak_746 chr1 224370945 224371215 + 93 NA exon (NM_003676, exon 1 of 3) exon (NM_003676, exon 1 of 3) 170 NM_003676 8560 Hs.299878 NM_003676 HPRD:13133 DEGS1 DEGS|DEGS-1|DES1|Des-1|FADS7|MLD delta(4)-desaturase, sphingolipid 1 protein-coding 0.148148 0.760148 -157(CCGGGGAGCCGC,-,0.00) -12(CCGACCGG,+,0.00) 88(TGCGCGGT,-,0.00) -148(CGCCGCCGCCGC,-,0.00),-145(CGCCGCCGCCGC,-,0.00),79(CGCGGGCCCTGC,-,0.00),80(GCGGGCCCTGCG,+,0.00) -156(CGGGGAGCCGCC,+,0.00),-69(TGGGGAGCCGCG,+,0.00) -76(GTCGCCATGGGG,+,0.00) 561_WT_peak_7457 chr9 132631426 132631789 + 93 NA promoter-TSS (NR_106914) promoter-TSS (NR_106914) -277 NR_106914 102466750 NR_106914 MIR6855 hsa-mir-6855 microRNA 6855 ncRNA 0.035813 0.626374 28(CGGAAGGAGCAG,+,0.00) -74(GGAAGCCGCAGG,+,0.00),16(GGCAGCCGGAGG,+,0.00) -68(CGCAGGGCCCGC,-,0.00),139(GCTGGGCCAGGC,+,0.00) 561_WT_peak_2950 chr16 89255123 89255227 + 93 NA intron (NM_004933, intron 7 of 13) (CA)n|Simple_repeat|Simple_repeat 11354 NM_001242757 146429 Hs.447544 NM_001242757 SLC22A31 - solute carrier family 22, member 31 protein-coding 0.028846 0.609524 561_WT_peak_4119 chr2 68947233 68947447 + 93 NA Intergenic L5|LINE|RTE -14573 NM_001007231 9938 Hs.531807 NM_014882 HPRD:09805 ARHGAP25 HEL-S-308|KAIA0053 Rho GTPase activating protein 25 protein-coding 0.000000 0.441860 -70(AAGTGGCT,+,0.00) 561_WT_peak_7414 chr9 123836955 123837437 + 93 NA Intergenic CpG -13378 NM_007018 11064 Hs.653263 NM_007018 HPRD:05691 CNTRL CEP1|CEP110|FAN|bA165P4.1 centriolin protein-coding 0.114108 0.699793 260(GCATCCGGCCCG,-,0.00) 295(GCGGGAAGGCCC,-,0.00) 117(CGGCACAA,-,0.00),265(CGGCCCGA,-,0.00) -52(CGTCGGCC,+,0.00),232(CGTCAGAC,+,0.00) -124(ACCTCGGCTCCC,-,0.00) 140(GCCGCGCC,+,0.00) -52(CGTCGGCCCCGC,-,0.00) 100(CGCGGCCCCTCG,-,0.00) 220(CTAGGCGG,+,0.00) 0(GCGCGCTGGCTG,+,0.00),66(GGGGCGTGGCTG,+,0.00) 561_WT_peak_6676 chr7 56174354 56174586 + 93 NA promoter-TSS (NM_016139) promoter-TSS (NM_016139) -283 NM_016139 51142 Hs.389996 NM_016139 HPRD:09879 CHCHD2 C7orf17 coiled-coil-helix-coiled-coil-helix domain containing 2 protein-coding 0.025862 0.493562 5(GGGCAGATTT,+,0.00) 561_WT_peak_1904 chr12 122985002 122985688 + 93 NA exon (NM_017612, exon 1 of 14) exon (NM_017612, exon 1 of 14) 275 NM_017612 55596 Hs.37706 NM_017612 ZCCHC8 - zinc finger, CCHC domain containing 8 protein-coding 0.099125 0.646288 100(TCGTCCTCCTCG,+,0.00) 63(AAGCCGCT,+,0.00),474(AAGCGACT,+,0.00) 440(CCCGGAGGACGG,-,0.00) 109(TCGTCGCC,+,0.00),155(TCGACTCC,+,0.00) -37(CGCCTGGCGCTG,-,0.00) -134(TCGGTCCG,-,0.00) -60(CGCCCGGC,-,0.00) 177(CGGCTCGA,-,0.00),292(CGGCACCA,-,0.00) 384(AGTCGCTA,+,0.00) -131(GTCCGCCG,-,0.00) -64(CCCTCGCCCGGC,-,0.00),-53(CGCTGCCCCGGC,-,0.00),-48(CCCCGGCCCCAC,-,0.00),-30(CGCTGCCCCGGC,-,0.00),-25(CCCCGGCCCCAC,-,0.00),251(GCGGAGCCGGCC,+,0.00),376(GCGGGGCCAGTC,+,0.00) 29(CGCGGAGCTGCT,+,0.00),73(CGTAGCTCCGCG,-,0.00) 80(CCGCGTCG,-,0.00) 412(GCAGCGGGGC,+,0.00) 561_WT_peak_7383 chr9 108457272 108457437 + 93 NA intron (NM_018112, intron 1 of 5) CpG 548 NM_018112 55151 Hs.411925 NM_018112 HPRD:15538 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding 0.103030 0.692771 -40(CCGCGCCAGCCC,+,0.00) -22(TGGGCGGC,-,0.00) 561_WT_peak_6758 chr7 97501469 97501773 + 93 NA promoter-TSS (NM_001178077) promoter-TSS (NM_001178077) -144 NM_133436 440 Hs.489207 NM_001673 HPRD:00153 ASNS ASNSD|TS11 asparagine synthetase (glutamine-hydrolyzing) protein-coding 0.105263 0.708197 99(AGGCCGCT,+,0.00) 92(GGCGGCGA,-,0.00) -144(GCCCCGCCCT,+,0.00),66(AGGCCAGGGA,-,0.00) -94(CCGCGTCTGCCG,-,0.00) 93(GCGGCGAGGC,+,0.00) 94(CGGCGAGGCCGC,-,0.00) 561_WT_peak_2649 chr16 1470996 1471428 + 93 NA promoter-TSS (NM_001272051) promoter-TSS (NM_001272051) -411 NM_001272051 283951 Hs.58373 NM_001010878 HPRD:17332 C16orf91 CCSMST1|gs103 chromosome 16 open reading frame 91 protein-coding 0.060185 0.572748 -57(CCGCCTGCCCTG,+,0.00),-22(CCGGCTTCCCCG,+,0.00) -72(CGCCCTCAGCCC,+,0.00) -97(TGCGCGGG,-,0.00) -94(GCGGGGCCTGGT,+,0.00) -92(GGGGCCTGGTTG,+,0.00) 561_WT_peak_4805 chr21 43299677 43299911 + 93 NA promoter-TSS (NM_001282934) promoter-TSS (NM_001282934) -203 NR_104258 63977 Hs.473893 NM_022115 HPRD:11458 PRDM15 C21orf83|PFM15|ZNF298 PR domain containing 15 protein-coding 0.081197 0.689362 -140(CGGACGCG,-,0.00) -143(CCTCGGAC,+,0.00) 18(GGCGGGCTCCGC,-,0.00) -98(GGGTCGAGTT,+,0.00) 26(CCGCCACG,-,0.00) 561_WT_peak_5503 chr4 76597638 76597978 + 93 NA intron (NM_203504, intron 1 of 10) CpG 535 NM_012297 9908 Hs.303676 NM_012297 HPRD:06570 G3BP2 - GTPase activating protein (SH3 domain) binding protein 2 protein-coding 0.094118 0.586510 -1(AAACCCGGATTC,+,0.00),31(GTGCCCGGAGGC,+,0.00),152(AGAGCCGAAAAC,+,0.00) 60(CGTCGCTT,+,0.00),115(TGGCGACG,-,0.00) -2(CAAACCCG,+,0.00) 561_WT_peak_7606 chrX 119694809 119695214 + 93 NA promoter-TSS (NM_001079872) promoter-TSS (NM_001079872) -194 NM_001079872 8450 Hs.102914 NM_003588 HPRD:02251 CUL4B CUL-4B|MRXHF2|MRXS15|MRXSC|SFM2 cullin 4B protein-coding 0.079012 0.669951 -88(GGGGGAGGGGGA,-,0.00) 50(CCCGGGGGGCGG,-,0.00) -11(GGCGCCGA,-,0.00) 57(GGCGGGGG,+,0.00) 234(TCGCGCCG,+,0.00) 97(CGGCTAAA,+,0.00) -14(CGCGGCGCCGAG,+,0.00),-14(CGCGGCGCCGAG,-,0.00) 58(GCGGGGGAGC,+,0.00) 561_WT_peak_1705 chr12 53039234 53039508 + 93 NA intron (NM_000423, intron 7 of 8) intron (NM_000423, intron 7 of 8) 6588 NM_000423 3849 Hs.707 NM_000423 HPRD:02560 KRT2 CK-2e|K2e|KRT2A|KRT2E|KRTE keratin 2 protein-coding 0.003650 0.498182 561_WT_peak_6736 chr7 76980927 76981144 + 92 NA intron (NM_017439, intron 18 of 30) intron (NM_017439, intron 18 of 30) -63480 NR_110073 101927243 Hs.547753 NR_110073 LOC101927243 - uncharacterized LOC101927243 ncRNA 0.013825 0.490826 -20(ATGTGGCT,+,0.00) 561_WT_peak_444 chr1 145455597 145455818 + 92 NA TTS (NM_032305) TTS (NM_032305) 14680 NM_032305 84265 Hs.591456 NM_032305 HPRD:14546 POLR3GL RPC32HOM|flj32422 polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like protein-coding 0.000000 0.481982 561_WT_peak_142 chr1 28559322 28559514 + 92 NA intron (NM_014280, intron 1 of 8) CpG 124 NM_014280 22826 Hs.433540 NM_014280 HPRD:13236 DNAJC8 HSPC331|SPF31 DnaJ (Hsp40) homolog, subfamily C, member 8 protein-coding 0.062500 0.616580 -16(CTCCGCCGCC,-,0.00) 15(AGCCGCCA,-,0.00) 561_WT_peak_4804 chr21 42798197 42798426 + 92 NA intron (NM_001178046, intron 1 of 14) CpG 353 NM_002462 4599 Hs.517307 NM_002462 HPRD:00919 MX1 IFI-78K|IFI78|MX|MxA MX dynamin-like GTPase 1 protein-coding 0.087336 0.617391 -96(TCGTGGCG,+,0.00),-67(GGGCACGA,-,0.00) -95(CGTGGCGG,+,0.00),-50(CTTCTCGG,+,0.00) -79(GCTCCGGAGC,+,0.00),-79(GCTCCGGAGC,-,0.00) 561_WT_peak_3218 chr17 44667688 44667915 + 92 NA promoter-TSS (NM_006178).2 promoter-TSS (NM_006178).2 -234 NM_006178 4905 Hs.431279 NM_006178 HPRD:03380 NSF SKD2 N-ethylmaleimide-sensitive factor protein-coding 0.066079 0.583333 -45(CGGCGCGA,-,0.00) 8(CGGCGGAC,+,0.00) 51(GCCCCGCAGC,-,0.00) 561_WT_peak_3768 chr19 40696629 40696911 + 92 NA promoter-TSS (NM_002446) promoter-TSS (NM_002446) -881 NM_002446 4294 Hs.466743 NM_002446 HPRD:02533 MAP3K10 MEKK10|MLK2|MST mitogen-activated protein kinase kinase kinase 10 protein-coding 0.049645 0.593640 67(CCGACGCC,+,0.00) 35(CGGCCCGA,-,0.00) 7(CCCCATCTTCCC,-,0.00) -2(TCCTCCCAGCCC,+,0.00) 561_WT_peak_269 chr1 65533478 65533605 + 92 NA Intergenic Intergenic -9350 NR_029516 406893 NR_029516 miRBase:MI0000103 MIR101-1 MIRN101-1 microRNA 101-1 ncRNA 0.070866 0.523438 -158(ACTTCCGGGTCT,-,0.00) -141(CCGGGAAGGGAG,-,0.00) -53(CGTGCGCG,-,0.00) 561_WT_peak_5249 chr3 128902238 128902559 + 92 NA intron (NM_001127192, intron 1 of 4) CpG 412 NM_001127196 7555 Hs.518249 NM_003418 HPRD:00311 CNBP CNBP1|DM2|PROMM|RNF163|ZCCHC22|ZNF9 CCHC-type zinc finger, nucleic acid binding protein protein-coding 0.115265 0.701863 -39(GGCGCCGA,-,0.00) 145(CCCTCTCTGTCC,+,0.00) 24(CGTCCGAC,+,0.00),25(GTCCGACA,-,0.00),53(GTCCGAGG,-,0.00) 56(CGAGGCGG,+,0.00) -47(GCGGCCGTGGCG,+,0.00),-45(GGCCGTGGCGCC,-,0.00),117(GCCGCCATCGCC,+,0.00) 561_WT_peak_7415 chr9 124115987 124116178 + 92 NA intron (NR_073037, intron 4 of 7) L2c|LINE|L2 16500 NR_073037 2040 Hs.253903 NM_004099 HPRD:00585 STOM BND7|EPB7|EPB72 stomatin protein-coding 0.010471 0.458333 561_WT_peak_4835 chr22 19929003 19929292 + 92 NA promoter-TSS (NM_000754) promoter-TSS (NM_000754) -116 NM_000754 1312 Hs.370408 NM_000754 HPRD:00284 COMT HEL-S-98n catechol-O-methyltransferase protein-coding 0.107266 0.737931 -135(CTGGGAAGGGGG,-,0.00) 71(GCCGCGCC,+,0.00) 8(CCCCGGCCGCGC,-,0.00) 90(CCGCCACG,-,0.00) 89(CCCGCCACGGCC,+,0.00) 6(CACCCCGGCCGC,-,0.00) 561_WT_peak_3238 chr17 47492263 47492436 + 92 NA promoter-TSS (NM_002634) promoter-TSS (NM_002634) -82 NM_002634 5245 Hs.514303 NM_002634 HPRD:01454 PHB HEL-215|HEL-S-54e|PHB1 prohibitin protein-coding 0.057803 0.551724 -13(AAGCGTTT,+,0.00) 561_WT_peak_5322 chr3 171178322 171178528 + 92 NA promoter-TSS (NM_001161566) promoter-TSS (NM_001161566) -228 NM_001161562 23043 Hs.34024 NM_015028 HPRD:18206 TNIK - TRAF2 and NCK interacting kinase protein-coding 0.058252 0.618357 -67(TCGGGCCG,+,0.00) -96(CCCTTTCCGCCC,+,0.00) 561_WT_peak_2652 chr16 2014499 2014774 + 92 NA promoter-TSS (NR_003020) promoter-TSS (NR_003020) 191 NM_002952 6187 Hs.356366 NM_002952 HPRD:04690 RPS2 LLREP3|S2 ribosomal protein S2 protein-coding 0.112727 0.721014 -142(GGCCCCGGATGC,+,0.00),79(CGACCCGATGTC,+,0.00) -152(CCGCGACCCCGG,+,0.00) 102(GCCGCCCA,+,0.00) -146(CCCCGGCCCCGG,-,0.00) -84(GCCACCAGGGCC,+,0.00) 561_WT_peak_5281 chr3 141515424 141515824 + 92 NA intron (NM_139209, intron 2 of 3) intron (NM_139209, intron 2 of 3) 18581 NM_139209 131890 Hs.680654 NM_139209 GRK7 GPRK7 G protein-coupled receptor kinase 7 protein-coding 0.020000 0.501247 138(AGCCGCTA,-,0.00) 189(TCGACACC,+,0.00) 179(AGGTTTTG,-,0.00) 561_WT_peak_1348 chr11 65189005 65189291 + 92 NA Intergenic Intergenic -1121 NR_028272 283131 Hs.523789 NR_002802 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA 0.017483 0.543554 561_WT_peak_3607 chr19 8582561 8582757 + 92 NA Intergenic Intergenic -3611 NM_001146175 84330 Hs.515114 NM_032370 HPRD:17511 ZNF414 ZFP414 zinc finger protein 414 protein-coding 0.020408 0.482234 -19(TGGTGCCG,+,0.00) -24(GGCCATGGTGCC,-,0.00) 561_WT_peak_3888 chr19 54382660 54382831 + 92 NA Intergenic CpG -2722 NM_002739 5582 Hs.631564 NM_002739 HPRD:01502 PRKCG PKC-gamma|PKCC|PKCG|SCA14 protein kinase C, gamma protein-coding 0.116959 0.744186 -123(GCCGGGAGGCGG,-,0.00) -106(TCGGTCGT,-,0.00) -160(GCGCCGCCGC,-,0.00) 561_WT_peak_5812 chr5 74532488 74532698 + 92 NA 5' UTR (NM_001164443, exon 1 of 25) 5' UTR (NM_001164443, exon 1 of 25) 110 NM_001164443 256006 Hs.482533 NM_001164443 ENSG00000145700 ANKRD31 - ankyrin repeat domain 31 protein-coding 0.061905 0.535545 21(GGCGGCCGCG,+,0.00) -78(AAACGCTT,-,0.00) 26(CCGCGAGCGCGG,-,0.00) -157(TGGACGCC,+,0.00) -116(TTTACCCT,-,0.00) 561_WT_peak_5589 chr4 122722270 122722407 + 92 NA promoter-TSS (NM_001034194) promoter-TSS (NM_001034194) -134 NM_005033 5393 Hs.91728 NM_005033 HPRD:07315 EXOSC9 PM/Scl-75|PMSCL1|RRP45|Rrp45p|p5|p6 exosome component 9 protein-coding 0.043796 0.456522 -70(CAAAGCCG,+,0.00) -66(GCCGCAATGGCT,+,0.00) 561_WT_peak_1575 chr12 8332869 8333114 + 92 NA TTS (NM_001004328) TTS (NM_001004328) 186 NR_026788 440078 Hs.512257 NR_026788 ENSG00000226711 FAM66C - family with sequence similarity 66, member C ncRNA 0.089796 0.715447 -92(AGGCCGCT,+,0.00) -71(CCGAGATGGCGG,-,0.00) -133(GGGCTGGGGCCT,-,0.00) -63(GCGGGCCCTGCG,+,0.00),26(CGCTGGGCCCGG,-,0.00) -154(GGCGCCATCGCC,+,0.00) 561_WT_peak_5316 chr3 169530400 169530571 + 92 NA promoter-TSS (NM_001172780) promoter-TSS (NM_001172780) 89 NM_001172780 151827 Hs.591289 NM_153353 HPRD:14519 LRRC34 - leucine rich repeat containing 34 protein-coding 0.035088 0.651163 -38(GCGTCCTGGCTC,+,0.00) 561_WT_peak_6950 chr8 26149010 26149220 + 92 NA 5' UTR (NM_002717, exon 1 of 10) 5' UTR (NM_002717, exon 1 of 10) 108 NM_002717 5520 Hs.146339 NM_002717 HPRD:09223 PPP2R2A B55A|B55ALPHA|PR52A|PR55A protein phosphatase 2, regulatory subunit B, alpha protein-coding 0.109524 0.710900 -77(TCGCCGCC,+,0.00) 0(GCCCGCCCCT,+,0.00) 21(CCCCCGGC,-,0.00) -16(TCCTGCCG,+,0.00) 5(CCCCTCCTTCCT,-,0.00) -91(CGTCGCTG,+,0.00) -106(CGCTGCCGCCGC,-,0.00),-76(CGCCGCCGCCGC,-,0.00) -45(GCGGGGAAGC,+,0.00) 561_WT_peak_5798 chr5 70015079 70015396 + 92 NA Intergenic LTR12E|LTR|ERV1 -133608 NR_027386 653188 Hs.631974 NR_027386 ENSG00000253203 GUSBP3 - glucuronidase, beta pseudogene 3 pseudo 0.107256 0.748428 3(CGGGCCGGAACC,+,0.00) -140(TCGGCGCC,+,0.00) 123(CGGCTGGCGCCG,-,0.00) 118(GCGGTCGG,-,0.00) -46(GGCCTGAGCGGG,-,0.00) -115(CTCTGGCCGCGC,-,0.00),62(GCGGGCTCAGCG,+,0.00),98(GGCGCGCCCCGC,-,0.00),124(GGCTGGCGCCGC,-,0.00),133(CGCCGGCCCTGG,-,0.00) 561_WT_peak_4520 chr2 240965191 240965392 + 92 NA promoter-TSS (NM_004544) promoter-TSS (NM_004544) -472 NM_004544 4705 Hs.277677 NM_004544 HPRD:11950 NDUFA10 CI-42KD|CI-42k NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa protein-coding 0.044776 0.529703 -85(CGGAGCTGAAGG,+,0.00) 561_WT_peak_1399 chr11 69064797 69065068 + 92 NA TTS (NM_138768) TTS (NM_138768) 3327 NM_001300924 26579 Hs.523848 NM_138768 HPRD:16130 MYEOV OCIM myeloma overexpressed protein-coding 0.044280 0.632353 43(CGCCCGGC,-,0.00) -9(GGGTTTTG,-,0.00) -123(AGCTGGCCCCGG,-,0.00) 64(GCAGCCCTGGCG,+,0.00),66(AGCCCTGGCGCC,-,0.00) 561_WT_peak_2404 chr15 22465915 22466187 + 92 NA Intergenic Intergenic 52589 NR_028067 390539 Hs.666555 NR_028067 ENSG00000259435 OR4N3P OR15-2 olfactory receptor, family 4, subfamily N, member 3 pseudogene pseudo 0.014706 0.457875 -77(CTGCTTCCTCCC,-,0.00) 561_WT_peak_41 chr1 8212836 8213081 + 92 NA Intergenic MIR3|SINE|MIR -126565 NM_018948 54206 Hs.605445 NM_018948 HPRD:09218 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding 0.028571 0.487805 561_WT_peak_5409 chr4 7045380 7045636 + 92 NA promoter-TSS (NM_153376) promoter-TSS (NM_153376) 352 NM_152293 93624 Hs.518614 NM_152293 ENSG00000173011 TADA2B ADA2(beta)|ADA2B transcriptional adaptor 2B protein-coding 0.121094 0.723735 -130(CTCGGCCGGC,-,0.00) -123(GGCGCCGA,-,0.00),-2(TGGACGCC,+,0.00) -129(TCGGCCGG,-,0.00) 38(CGGCGCGA,-,0.00) -102(CGCCGCTA,+,0.00) 49(GGGCCGGGTC,+,0.00) -133(CTTCTCGG,+,0.00) 561_WT_peak_2351 chr14 96968760 96968965 + 92 NA promoter-TSS (NM_001293628) promoter-TSS (NM_001293628) 149 NM_001252006 10914 Hs.253726 NM_032632 HPRD:10407 PAPOLA PAP poly(A) polymerase alpha protein-coding 0.082927 0.660194 -84(CCTCCCTCCCGC,+,0.00) -18(TGGGCGGT,-,0.00) -15(GCGGTGCCGGCG,+,0.00) -59(GCCCAGGGCGGC,-,0.00) -98(GAGGCAGGCCCC,-,0.00) 561_WT_peak_293 chr1 77684878 77685112 + 92 NA exon (NM_005482, exon 1 of 11) exon (NM_005482, exon 1 of 11) 137 NM_005482 10026 Hs.178305 NM_005482 HPRD:05474 PIGK GPI8 phosphatidylinositol glycan anchor biosynthesis, class K protein-coding 0.059829 0.612766 -86(CCGGCCTCCCGG,+,0.00) 47(TTTACCGG,-,0.00) -34(GCGGCCACGCTG,+,0.00),14(GCAGCCCGGCTG,+,0.00) 561_WT_peak_2051 chr13 50366895 50367127 + 92 NA promoter-TSS (NM_002267) promoter-TSS (NM_002267) 46 NM_002267 3839 Hs.527919 NM_002267 HPRD:03536 KPNA3 IPOA4|SRP1|SRP1gamma|SRP4|hSRP1 karyopherin alpha 3 (importin alpha 4) protein-coding 0.077586 0.618026 51(TCCACGCC,+,0.00) -9(CGCGGGGCGGCG,+,0.00) 561_WT_peak_7032 chr8 61841905 61842090 + 92 NA Intergenic Intergenic 38310 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA 0.016216 0.462366 -75(CCTTCCTGATTC,-,0.00),-2(GCTGCTTGTTTC,-,0.00) 561_WT_peak_6590 chr7 8165421 8165914 + 92 NA intron (NM_001276478, intron 13 of 13) intron (NM_001276478, intron 13 of 13) 136015 NM_022307 3382 Hs.487561 NM_004968 HPRD:00971 ICA1 ICA69|ICAp69 islet cell autoantigen 1, 69kDa protein-coding 0.010142 0.532389 -119(AGTTCCTGTTTC,-,0.00) 8(CCCCATGGCCGC,-,0.00) 561_WT_peak_867 chr10 6312246 6312700 + 92 NA Intergenic L2c|LINE|L2 -56034 NR_040079 399715 NR_040079 ENSG00000215244 LOC399715 - uncharacterized LOC399715 ncRNA 0.019824 0.465934 98(AGAGGCTT,-,0.00) 193(TTTACCAG,-,0.00) -19(GTTTCCTGTTGC,-,0.00),153(GCTTGCTGTTTC,-,0.00) 561_WT_peak_2452 chr15 43622212 43622714 + 92 NA promoter-TSS (NM_001159280) promoter-TSS (NM_001159280) -91 NM_001159280 161823 Hs.533913 NM_001012969 HPRD:11779 ADAL - adenosine deaminase-like protein-coding 0.129482 0.669980 34(TCGAAGCC,+,0.00) 275(CCGCGCCTGCCC,+,0.00) -129(CGCGGACG,+,0.00),-127(CGGACGCG,-,0.00),107(CGCGCACG,+,0.00),128(CGCGTGCG,+,0.00),130(CGTGCGCG,-,0.00),134(CGCGGACG,+,0.00),215(CGTACCCG,-,0.00) 283(GCCCGACG,-,0.00) 8(CGGTTTTT,-,0.00) -49(GCCGCGCC,+,0.00),105(AGCGCGCA,+,0.00),132(TGCGCGGA,-,0.00),165(TGCGCGGC,-,0.00),175(GCCGCGCC,+,0.00),274(ACCGCGCC,+,0.00) 71(GCGCGGCCTGGG,+,0.00),224(GCGCGGCCAGGG,+,0.00) 293(CACGGCTCCGGG,-,0.00) -3(CAGGCGGCCCGC,-,0.00) 561_WT_peak_2737 chr16 23521544 23521769 + 92 NA exon (NM_015044, exon 1 of 17) exon (NM_015044, exon 1 of 17) 159 NM_015044 23062 Hs.460336 NM_015044 HPRD:09347 GGA2 VEAR golgi-associated, gamma adaptin ear containing, ARF binding protein 2 protein-coding 0.146667 0.787611 -46(GCTGCCGGGCCC,-,0.00) -157(CCGCCCGCCCCG,+,0.00),-136(CCCGGGAGGCGG,-,0.00),-135(CCGGGAGGCGGG,-,0.00) 15(TCGCCGCC,+,0.00) 46(GCCGCGGG,+,0.00) -53(CAGCGACG,-,0.00) -43(GCCGGGCCCGGG,+,0.00),10(CGCGGTCGCCGC,-,0.00) -21(CCGACTCG,-,0.00),-20(CGACTCGG,+,0.00) 17(GCCGCCATCGCT,+,0.00) -107(GCGGCGCAGC,+,0.00),-107(GCGGCGCAGC,-,0.00) 561_WT_peak_6327 chr6 42749829 42750038 + 92 NA Intergenic Intergenic -36049 NM_003192 6903 Hs.75064 NM_003192 HPRD:04276 TBCC CFC tubulin folding cofactor C protein-coding 0.019139 0.428571 22(CAAAACCA,+,0.00) 561_WT_peak_7445 chr9 131710017 131710315 + 92 NA promoter-TSS (NM_014908) promoter-TSS (NM_014908) -154 NM_014908 22845 Hs.531563 NM_014908 HPRD:15525 DOLK CDG1M|DK|DK1|SEC59|TMEM15 dolichol kinase protein-coding 0.097315 0.685619 78(CTCGGCCTCC,-,0.00) -129(CCGGGGTGGCTG,-,0.00) -104(CAAAGCCG,+,0.00) -21(CCGAGACG,-,0.00) -151(GGTGCGGAGC,+,0.00),-121(GCTGTGAAGC,+,0.00) 561_WT_peak_2028 chr13 45914521 45914775 + 91 NA promoter-TSS (NR_024458) promoter-TSS (NR_024458) 771 NM_003295 7178 Hs.374596 NM_003295 HPRD:15979 TPT1 HRF|TCTP|p02|p23 tumor protein, translationally-controlled 1 protein-coding 0.062992 0.596078 -39(GGAGGAGGATGG,-,0.00) -43(CCCGGGAGGAGG,-,0.00) -28(GGCGCCGA,-,0.00) -14(GGGCCTATTT,+,0.00) -23(CGAGGCGG,+,0.00) 561_WT_peak_655 chr1 185125631 185126217 + 91 NA promoter-TSS (NM_001105518) promoter-TSS (NM_001105518) 192 NM_030934 81627 Hs.107149 NM_030934 HPRD:12722 TRMT1L C1orf25|MST070|TRM1L|bG120K12.3 tRNA methyltransferase 1 homolog (S. cerevisiae)-like protein-coding 0.071672 0.647359 -3(TCCACCTCCTCC,+,0.00) -72(GAATCCGGGGCC,-,0.00),367(GTCTCCGGCCCA,-,0.00) 76(CCGGGGACCCGG,-,0.00) 289(ACGACGCC,+,0.00),328(GGCGTCCA,-,0.00) -125(GGGCAGGGGCTG,-,0.00),-119(GGGCTGGGGCTG,-,0.00),-113(GGGCTGGAGCCG,-,0.00) -157(TAGGGACG,-,0.00) 390(CCAAACCG,+,0.00) 274(TTTCCCCG,-,0.00) 227(AAAACAGAAAGC,+,0.00) 304(ACTGCGCA,+,0.00) -134(CCTGGGCCAGGG,+,0.00),-68(CCGGGGCCGGAG,+,0.00),101(GCGGGGTCAGAG,+,0.00) 561_WT_peak_5167 chr3 97540988 97541206 + 91 NA exon (NM_153605, exon 1 of 22) exon (NM_153605, exon 1 of 22) 213 NM_153605 131544 Hs.733378 NM_153605 CRYBG3 DKFZp667G2110 beta-gamma crystallin domain containing 3 protein-coding 0.073394 0.703196 -63(CAGCTTCTCCCG,-,0.00) -126(CCCGGGCCAGCG,+,0.00) 561_WT_peak_5370 chr3 196359058 196359482 + 91 NA Intergenic CpG -7386 NM_198565 375387 Hs.702186 NM_198565 HPRD:17452 NRROS GARPL1|LRRC33|UNQ3030 negative regulator of reactive oxygen species protein-coding 0.054245 0.623529 122(GGCGGCCGAG,+,0.00) -24(CCCCCGGC,-,0.00),241(CCCGCGGC,-,0.00) 71(CATTCCGCTCCC,-,0.00) -74(CCTCCCTGTTTC,-,0.00) -29(CCCTGCCCCCGG,-,0.00),55(CCCGGTCCCCGC,-,0.00) 243(CGCGGCCCCGGG,-,0.00) 561_WT_peak_4604 chr20 32581732 32582175 + 91 NA intron (NM_016732, intron 1 of 9) CpG 220 NR_109886 101926888 Hs.405849 NR_109885 ENSG00000228265 RALY-AS1 - RALY antisense RNA 1 ncRNA 0.117381 0.704955 125(AGGCCGCT,+,0.00) -2(CCTCCTTCCCAG,+,0.00),227(CCGCCGCCCCGG,+,0.00),235(CCGGGTCCCCGG,+,0.00) -106(GGCGGCGA,-,0.00),-97(GGCGACGA,-,0.00) -156(CGGCGCCAGCTC,+,0.00),244(CGGCCCCAGCCC,+,0.00) -67(CAGCCTCTTCCC,-,0.00) -110(TAGCGGCG,-,0.00) -157(GCGGCGCCAGCT,+,0.00),-105(GCGGCGACGGCG,+,0.00) 1(CCTTCCCAGC,-,0.00) 120(CCGGCAGGCCGC,-,0.00) 561_WT_peak_6971 chr8 30580538 30580736 + 91 NA intron (NM_001195103, intron 1 of 11) intron (NM_001195103, intron 1 of 11) 4849 NM_001195104 2936 Hs.271510 NM_000637 HPRD:00704 GSR HEL-75 glutathione reductase protein-coding 0.020202 0.502513 -135(CAAAACCA,+,0.00) 561_WT_peak_1787 chr12 89638838 89639277 + 91 NA Intergenic L2c|LINE|L2 107579 NM_001946 1848 Hs.298654 NM_001946 HPRD:04124 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding 0.011390 0.440909 -123(AAGCCTCT,+,0.00),-25(AGAGGCCT,-,0.00) -113(TCGAAGCC,+,0.00) 561_WT_peak_546 chr1 155178604 155178992 + 91 NA exon (NM_002455, exon 1 of 8) exon (NM_002455, exon 1 of 8) 308 NM_002455 4580 Hs.490874 NM_002455 HPRD:11861 MTX1 MTX|MTXN metaxin 1 protein-coding 0.097938 0.753213 80(CCGCCCTCCCCC,+,0.00) 80(CCGCCCTCCCCC,+,0.00),147(TCGCCTCCCCGG,+,0.00) 96(CCCGCGGC,-,0.00),202(GGCGGGGG,+,0.00) -34(GCCGCGCC,+,0.00) -151(CGCAGTCCCCGC,-,0.00),210(GCGGGCCCAGGC,+,0.00) 561_WT_peak_7406 chr9 117661099 117661399 + 91 NA intron (NM_001252290, intron 4 of 4) LTR67B|LTR|ERVL 31626 NM_001244 944 Hs.494901 NM_001244 TNFSF8 CD153|CD30L|CD30LG tumor necrosis factor (ligand) superfamily, member 8 protein-coding 0.026667 0.498339 -23(AAGCCGCT,+,0.00),-22(AGCCGCTA,-,0.00) -62(CAAAACTG,+,0.00) -91(CAATCAGGAAGC,+,0.00),-31(CAATCAGGAAGC,+,0.00) 561_WT_peak_5907 chr5 131826222 131826463 + 91 NA 5' UTR (NM_002198, exon 1 of 10) 5' UTR (NM_002198, exon 1 of 10) 123 NM_002198 3659 Hs.436061 NM_002198 HPRD:00961 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding 0.136929 0.710744 -6(GGCGTGGA,-,0.00) -73(CGCGACTCCGAG,-,0.00),7(CACGGCTCCGGG,-,0.00) 561_WT_peak_3174 chr17 38804091 38804636 + 91 NA promoter-TSS (NM_003079) promoter-TSS (NM_003079) -260 NM_003079 6605 Hs.743978 NM_003079 HPRD:04382 SMARCE1 BAF57 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 protein-coding 0.082569 0.604396 -110(TTTTCCGGGCCC,-,0.00) 93(TAGCGGCT,+,0.00) 349(GGCGTGGA,-,0.00) 191(CGGATGGCGCTC,-,0.00) -163(CGCGTCCG,+,0.00) 65(CCGACCTA,+,0.00),123(GCGACCGA,+,0.00) 24(GCCGGGCG,+,0.00) 251(CCCGCTGAGCCC,+,0.00) 289(CGGTCTTG,-,0.00) 253(CGCTGAGCCCGC,-,0.00) 205(CGCGAGGCCGCG,+,0.00) 172(GGGCCGCGGT,+,0.00) 364(CTTCGCGG,+,0.00) 363(GCTTCGCGGC,-,0.00) 561_WT_peak_2794 chr16 31106139 31106330 + 91 NA promoter-TSS (NM_206824) promoter-TSS (NM_206824) 42 NM_206824 79001 Hs.324844 NM_024006 HPRD:10540 VKORC1 EDTP308|IMAGE3455200|MST134|MST576|VKCFD2|VKOR vitamin K epoxide reductase complex, subunit 1 protein-coding 0.104712 0.635417 -49(CGGGTAAG,+,0.00) 13(GGCGCGGC,-,0.00) -27(GCGGCCCCAGCG,+,0.00) -30(ATCGCGGCCC,-,0.00) -15(GCTGCCAGGC,+,0.00) 561_WT_peak_5598 chr4 140187786 140188125 + 91 NA exon (NM_032623, exon 4 of 4) exon (NM_032623, exon 4 of 4) 13537 NM_032623 84709 Hs.710036 NM_032623 HPRD:17805 MGARP C4orf49|CESP-1|HUMMR|OSAP mitochondria-localized glutamic acid-rich protein protein-coding 0.023599 0.497059 52(TGGCCCGGTTTC,+,0.00) 561_WT_peak_671 chr1 198651045 198651518 + 91 NA intron (NR_052021, intron 2 of 2) intron (NR_052021, intron 2 of 2) 43183 NM_002838 5788 Hs.654514 NM_002838 HPRD:01050 PTPRC B220|CD45|CD45R|GP180|L-CA|LCA|LY5|T200 protein tyrosine phosphatase, receptor type, C protein-coding 0.010571 0.409283 561_WT_peak_4836 chr22 20104441 20104755 + 91 NA promoter-TSS (NM_001278641) promoter-TSS (NM_001278641) 220 NM_182984 27037 Hs.713579 NM_022727 HPRD:13719 TRMT2A HTF9C tRNA methyltransferase 2 homolog A (S. cerevisiae) protein-coding 0.105096 0.714286 123(GGCGGAGGCCGA,-,0.00) 126(GGAGGCCGAG,+,0.00) -27(CCGCCACCCCCG,+,0.00),54(CCGCCCGCCCGC,+,0.00) -30(TCGCCGCC,+,0.00) 116(CGCGTGCG,+,0.00) -21(CCCCCGGC,-,0.00) 136(CGTCTCTA,+,0.00) -76(GTGCTCAGAGGG,-,0.00) -160(CCGCCTAG,-,0.00) -146(GACGCCATGGGG,+,0.00),-144(CGCCATGGGGGC,-,0.00),61(CCCGCCAGGGGC,+,0.00) -15(GCTTCGCCCC,-,0.00) 561_WT_peak_2141 chr14 24025132 24025582 + 91 NA non-coding (NR_023314, exon 1 of 2) non-coding (NR_023314, exon 1 of 2) 166 NR_023314 79178 Hs.655179 NM_024328 HPRD:15505 THTPA THTP|THTPASE thiamine triphosphatase protein-coding 0.095556 0.676275 132(CCGGGCGCGCGG,-,0.00) 131(GCCGGGCG,+,0.00) 117(TGGTGCCG,+,0.00),148(TCGGGCCG,+,0.00) -150(TAGCGACG,-,0.00) -26(GCGGGGCCAACA,+,0.00) 150(GGGCCGAGGT,+,0.00) 7(GCGGCCTCGCTC,+,0.00) 561_WT_peak_1841 chr12 108954767 108955198 + 91 NA promoter-TSS (NM_014301) promoter-TSS (NM_014301) 183 NM_014706 9733 Hs.584842 NM_014706 HPRD:11532 SART3 DSAP1|P100|RP11-13G14|TIP110|p110|p110(nrb) squamous cell carcinoma antigen recognized by T cells 3 protein-coding 0.064965 0.537037 30(CGCGGCCGCC,-,0.00) -96(AGCCGCCT,-,0.00) 28(CCCGCGGC,-,0.00),64(CCCGCGGC,-,0.00) 233(CTTCGGAC,+,0.00) 561_WT_peak_748 chr1 225616090 225616371 + 91 NA promoter-TSS (NM_002296) promoter-TSS (NM_002296) 327 NM_194442 3930 Hs.435166 NM_002296 HPRD:02488 LBR DHCR14B|LMN2R|PHA|TDRD18 lamin B receptor protein-coding 0.081851 0.553191 -138(AGGTGGCT,+,0.00),-53(AAGCGTTT,+,0.00),21(AGCGGCAT,-,0.00) 24(GGCATCGA,-,0.00) 88(CGGACCGA,+,0.00) 45(CGCTTTTG,-,0.00) 41(GGGGCGCTTT,+,0.00) 561_WT_peak_2239 chr14 60797920 60798128 + 91 NA Intergenic Intergenic 82058 NM_021003 5494 Hs.130036 NM_021003 HPRD:16199 PPM1A PP2C-ALPHA|PP2CA|PP2Calpha protein phosphatase, Mg2+/Mn2+ dependent, 1A protein-coding 0.033654 0.550239 -136(GCACCCTCCTCC,+,0.00) -86(CGTGCGCG,-,0.00) 561_WT_peak_6495 chr6 139696329 139696745 + 91 NA promoter-TSS (NM_006079) promoter-TSS (NM_006079) -750 NM_006079 10370 Hs.82071 NM_006079 HPRD:04245 CITED2 ASD8|MRG-1|MRG1|P35SRJ|VSD2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding 0.067308 0.606715 53(GCTTTCGGGCCC,-,0.00) 141(AGGCGTCT,+,0.00) 237(CCGGGAGGTGGG,-,0.00) -35(GGGCGGGGAGGG,-,0.00) 66(CCTGCCGCTCCC,-,0.00) 561_WT_peak_5788 chr5 68389842 68390212 + 91 NA 5' UTR (NM_022902, exon 1 of 16) 5' UTR (NM_022902, exon 1 of 16) 251 NM_024055 64924 Hs.631975 NM_022902 HPRD:06381 SLC30A5 ZNT5|ZNTL1|ZTL1|ZnT-5 solute carrier family 30 (zinc transporter), member 5 protein-coding 0.143243 0.743935 -153(GCTGCTTCCCGG,+,0.00),72(CCGGGATGGAGG,-,0.00) -155(CCGCTGCTTCCC,-,0.00) -41(GCCCGACG,-,0.00) -139(ACCTGGCGCCGC,-,0.00),-83(CCGGAGCCGGCG,+,0.00),106(GGCCGGCCCCGG,-,0.00),117(GCGGCGGCGGCG,+,0.00) 2(CGCTGTTCCGCG,-,0.00) -75(GGCGACGGCGGC,-,0.00),110(GGCCCCGGCGGC,-,0.00),126(GCGGCCTTGGGC,+,0.00) -59(GCGGCCCGGCCT,+,0.00) 561_WT_peak_3135 chr17 34890682 34891264 + 91 NA promoter-TSS (NM_178517) promoter-TSS (NM_178517) 332 NM_025109 80179 Hs.302051 NM_025109 HPRD:10107 MYO19 MYOHD1 myosin XIX protein-coding 0.094502 0.663808 -17(CGCGCACG,+,0.00) -64(TCGGCCGG,-,0.00) -72(GCCGGGGG,+,0.00) 405(TGGCACGA,-,0.00) 212(GTCCGGCG,-,0.00),233(GTCCGGCG,-,0.00),236(CGGCGGAC,+,0.00) 56(GGGGTAAA,+,0.00),67(AGGGTAAA,+,0.00) -43(GCGGGGCGAGCA,+,0.00) 561_WT_peak_3510 chr18 54384048 54384278 + 91 NA intron (NM_015285, intron 12 of 27) intron (NM_015285, intron 12 of 27) 65547 NM_052834 23335 Hs.465213 NM_015285 HPRD:10306 WDR7 TRAG WD repeat domain 7 protein-coding 0.008696 0.393939 561_WT_peak_3107 chr17 28804292 28804637 + 91 NA promoter-TSS (NM_001007025) promoter-TSS (NM_001007025) 38 NM_004871 9527 Hs.462680 NM_004871 ENSG00000108587 GOSR1 GOLIM2|GOS-28|GOS28|GOS28/P28|GS28|P28 golgi SNAP receptor complex member 1 protein-coding 0.066667 0.621387 128(AGCGGCCGAG,+,0.00) 61(AGGGTGAGAGGG,-,0.00),71(GGGCTGAGTGAG,-,0.00) -102(CGTCGGCC,+,0.00),-19(CGTTGGAC,+,0.00),53(GTCCTACG,-,0.00) -119(CGCGGAGGCTCG,+,0.00) 142(GCAGCGGGGC,+,0.00) 129(GCGGCCGAGCTG,+,0.00) 561_WT_peak_1003 chr10 62537911 62538199 + 91 NA promoter-TSS (NM_001786) promoter-TSS (NM_001786) -34 NM_001170406 983 Hs.732435 NM_001786 HPRD:00302 CDK1 CDC2|CDC28A|P34CDC2 cyclin-dependent kinase 1 protein-coding 0.059028 0.525952 -7(CCGCCCTCCTGC,+,0.00) -90(GCTTCCTGCTCC,-,0.00) 561_WT_peak_1541 chr12 510692 510915 + 91 NA promoter-TSS (NM_001130146) promoter-TSS (NM_001130146) 62 NM_001130146 84318 Hs.631656 NM_032358 HPRD:17485 CCDC77 - coiled-coil domain containing 77 protein-coding 0.058296 0.526786 -27(TGACTCGGAGTC,+,0.00) 10(CGGGTTTG,-,0.00) -73(GCCGCGCC,+,0.00) 561_WT_peak_1510 chr11 121353150 121353362 + 91 NA intron (NM_003105, intron 3 of 47) intron (NM_003105, intron 3 of 47) 30344 NM_003105 6653 Hs.368592 NM_003105 HPRD:03595 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin-related receptor, L(DLR class) A repeats containing protein-coding 0.000000 0.507042 -150(AGGCTGAGTGGG,-,0.00) 561_WT_peak_5647 chr4 185458809 185459026 + 91 NA Intergenic MER2|DNA|TcMar-Tigger -63191 NM_002199 3660 Hs.654566 NM_002199 HPRD:00962 IRF2 IRF-2 interferon regulatory factor 2 protein-coding 0.041475 0.509174 13(CGCCTACG,+,0.00) -39(CAAATCCG,+,0.00) 561_WT_peak_522 chr1 151227259 151227452 + 91 NA intron (NM_002810, intron 1 of 9) intron (NM_002810, intron 1 of 9) 158 NM_002810 5710 Hs.505059 NM_002810 HPRD:03386 PSMD4 AF|AF-1|ASF|MCB1|Rpn10|S5A|pUB-R5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 protein-coding 0.051813 0.695876 -124(CGGGGCAGGAGG,-,0.00) -29(CCCTGGCCCCGG,-,0.00) -33(GCGGCCCTGGCC,+,0.00),-31(GGCCCTGGCCCC,-,0.00) 561_WT_peak_6082 chr6 3068858 3069089 + 91 NA Intergenic CpG -8085 NM_003804 8737 Hs.519842 NM_003804 HPRD:04583 RIPK1 RIP|RIP1 receptor (TNFRSF)-interacting serine-threonine kinase 1 protein-coding 0.138528 0.737069 12(CTCCGCCGCC,-,0.00) -10(GGCGTCGG,-,0.00) 20(CCGCTTCTTCCC,-,0.00) -8(CGTCGGAG,+,0.00) -150(GGCGCGGC,-,0.00),-132(GGCGCGGT,-,0.00) 561_WT_peak_2933 chr16 85969868 85970278 + 91 NA Intergenic Intergenic 18120 NR_106832 102466732 NR_106832 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA 0.031707 0.493917 -139(AGCCACTT,-,0.00) 561_WT_peak_5332 chr3 179041250 179041478 + 91 NA promoter-TSS (NM_016331) promoter-TSS (NM_016331) -187 NM_016331 51193 Hs.632578 NM_016331 HPRD:15882 ZNF639 6230400O18Rik|ANC-2H01|ANC_2H01|ZASC1 zinc finger protein 639 protein-coding 0.096491 0.698690 -124(CTCGGCCCCC,-,0.00) -13(AGGCGGCT,+,0.00) -22(CCGGGGTGGAGG,-,0.00) 55(CGGGACGA,-,0.00) 21(CTCCGACG,-,0.00) -126(CCCTCGGCCCCC,-,0.00) -144(GACGCCTTGGCC,+,0.00) 561_WT_peak_6228 chr6 27834281 27835466 + 91 NA exon (NM_005322, exon 1 of 1) exon (NM_005322, exon 1 of 1) 486 NM_005322 3009 Hs.131956 NM_005322 HPRD:00821 HIST1H1B H1|H1.5|H1B|H1F5|H1s-3 histone cluster 1, H1b protein-coding 0.053165 0.553963 -109(AGGCGTCT,+,0.00),197(AGCCGCCT,-,0.00),244(TAGCGGCT,+,0.00),245(AGCGGCTT,-,0.00),323(AGCGGCCT,-,0.00),615(ATGCGGCT,+,0.00) 360(TTGACGCC,+,0.00) 372(GCCGCGGG,+,0.00) 841(CGGCAGGA,-,0.00) 841(CGGCAGGAGCGG,+,0.00) 475(TAGCGGCG,-,0.00),746(CGTCGCTT,+,0.00) -106(CGTCTGAC,+,0.00) 161(CGGTTTTC,-,0.00),224(AGGTTTTG,-,0.00),247(CGGCTTTG,-,0.00),314(CGGTTTGG,-,0.00),910(AGGTTTTG,-,0.00) -33(TGGGTAAA,+,0.00) 177(GCTTCCTACTTC,-,0.00) 477(GCGGCGCCTGCC,+,0.00),762(GCAGCGCCGGCG,+,0.00),766(CGCCGGCGCCGG,-,0.00),931(CTCGGGCCCCGG,-,0.00) 324(GCGGCCTTGGCC,+,0.00) 256(GCTTTGCCGC,-,0.00),757(GCTTAGCAGC,-,0.00) 561_WT_peak_3723 chr19 35167777 35168210 + 91 NA promoter-TSS (NM_001289187) promoter-TSS (NM_001289187) -551 NM_001289185 55900 Hs.436350 NM_018443 HPRD:15765 ZNF302 HSD16|MST154|MSTP154|ZNF135L|ZNF140L|ZNF327 zinc finger protein 302 protein-coding 0.043880 0.548387 199(TAGCAACG,-,0.00) 177(GGGATGAGAGGA,-,0.00) 216(TGCGCGGT,-,0.00) 561_WT_peak_3573 chr19 2819748 2819966 + 91 NA promoter-TSS (NM_001102651) promoter-TSS (NM_001102651) -15 NM_001102651 115196 Hs.307043 NM_152303 ZNF554 - zinc finger protein 554 protein-coding 0.142202 0.748858 -156(CCGCCCGCCCGG,+,0.00) -95(GCGGGGCCTGCT,+,0.00) -160(GACGCCGCCC,-,0.00),-45(GTGCCGAGTT,+,0.00) -98(GCTGCGGGGC,+,0.00) 561_WT_peak_5067 chr3 40498472 40498692 + 91 NA promoter-TSS (NM_003973) promoter-TSS (NM_003973) -201 NM_003973 9045 Hs.446522 NM_003973 HPRD:10617 RPL14 CAG-ISL-7|CTG-B33|L14|RL14|hRL14 ribosomal protein L14 protein-coding 0.045455 0.443439 3(TCGCCGCC,+,0.00) 5(GCCGCCCA,+,0.00) 561_WT_peak_1706 chr12 53400229 53400540 + 91 NA intron (NM_001417, intron 1 of 14) CpG 342 NM_001300821 1975 Hs.648394 NM_001417 HPRD:04892 EIF4B EIF-4B|PRO1843 eukaryotic translation initiation factor 4B protein-coding 0.048232 0.592949 -163(TCATCCGGGTCT,-,0.00) 60(GGGAGGGGAAGG,+,0.00),75(CCTTCCCCTCCC,-,0.00) -129(CAACATGGCGGC,-,0.00) 561_WT_peak_2857 chr16 57643693 57644042 + 91 NA Intergenic Intergenic -9738 NM_001290142 9289 Hs.513633 NM_005682 HPRD:06824 GPR56 BFPP|BPPR|TM7LN4|TM7XN1 G protein-coupled receptor 56 protein-coding 0.014327 0.440000 -25(TGGTTTTG,-,0.00) -122(GCTGGGGAGC,+,0.00) 561_WT_peak_1199 chr11 8703977 8704521 + 91 NA 5' UTR (NM_000990, exon 1 of 5) 5' UTR (NM_000990, exon 1 of 5) 254 NM_000990 6157 Hs.523463 NM_000990 HPRD:04701 RPL27A L27A ribosomal protein L27a protein-coding 0.080882 0.645872 68(AAGCGACT,+,0.00),69(AGCGACTA,-,0.00) 109(CCGCCCGA,+,0.00) 7(CGAAACCG,+,0.00) 60(GAAAGAGGAAGC,+,0.00),193(CCTTCCTTTTTC,-,0.00) 328(GCTGCGCA,+,0.00) 364(GCGGGCCCGGGG,+,0.00) -146(AACGAGGCCC,-,0.00) -111(GACCAAGGCGCC,-,0.00),156(GCCCCCGTGGCC,+,0.00),331(GCGCATGGCCGC,-,0.00) 561_WT_peak_3401 chr17 80476936 80477234 + 91 NA promoter-TSS (NM_004514) promoter-TSS (NM_004514) -509 NM_004514 3607 Hs.591140 NM_004514 HPRD:00982 FOXK2 ILF|ILF-1|ILF1 forkhead box K2 protein-coding 0.100671 0.595318 6(GTCACCGGGTCC,-,0.00) 86(CTCGGCGGCC,-,0.00),89(GGCGGCCGGG,+,0.00) 80(AGGCCGCT,+,0.00) -160(CGCCCGGC,-,0.00) 36(CGGCACGC,-,0.00) -76(CAGTTTTG,-,0.00) 72(CGGGGAAA,+,0.00) -164(ACCGCGCC,+,0.00) 93(GCCGGGCCTGGG,+,0.00) 39(CACGCGGCCC,-,0.00) 561_WT_peak_688 chr1 203764679 203765077 + 91 NA 5' UTR (NM_014827, exon 1 of 20) 5' UTR (NM_014827, exon 1 of 20) 127 NM_014827 9877 Hs.532399 NM_014827 HPRD:11100 ZC3H11A ZC3HDC11A zinc finger CCCH-type containing 11A protein-coding 0.077889 0.616541 124(GGAGGTGGGGGA,-,0.00) 154(AGCGGCCT,-,0.00) 120(CCGGGGAGGTGG,-,0.00),189(CCGGGAAGTCAG,-,0.00) -122(TCGTGCTG,+,0.00) -13(CGACGGAC,+,0.00) -109(TTTACCGG,-,0.00) -1(GCGGCCAAGC,+,0.00) 561_WT_peak_2514 chr15 64915106 64915322 + 90 NA exon (NM_015042, exon 2 of 9) exon (NM_015042, exon 2 of 9) 80266 NM_001301302 4947 Hs.744924 NM_002537 HPRD:11966 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding 0.018519 0.543779 -114(ATGTGGCT,+,0.00),-7(ATGTGGCT,+,0.00) -145(CGTACCCG,-,0.00) 561_WT_peak_6936 chr8 19354454 19354881 + 90 NA intron (NR_024040, intron 3 of 9) L1MCc|LINE|L1 105389 NM_001130518 55790 Hs.613729 NM_018371 HPRD:13114 CSGALNACT1 CSGalNAcT-1|ChGn|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding 0.009368 0.492991 561_WT_peak_1778 chr12 76477983 76478402 + 90 NA intron (NM_139207, intron 1 of 15) CpG 546 NM_139207 4673 Hs.524599 NM_004537 HPRD:01248 NAP1L1 NAP1|NAP1L|NRP nucleosome assembly protein 1-like 1 protein-coding 0.107399 0.728571 12(CCCTCTCAGGCT,+,0.00) 48(GTCCGACC,-,0.00) -50(GCCGCGCC,+,0.00),147(GCCGCCCA,+,0.00),232(GCTGCGCA,+,0.00) 80(GGGCGGCCAGCG,+,0.00) -148(GCGGCGCAGC,+,0.00),-148(GCGGCGCAGC,-,0.00) -111(GCGGCCTCGCTC,+,0.00),-57(CCTCCAGGCCGC,-,0.00),216(GAGCCAGGCGGC,-,0.00) 561_WT_peak_4819 chr21 47706020 47706303 + 90 NA promoter-TSS (NM_058181) promoter-TSS (NM_058181) -106 NM_058181 54059 Hs.474066 NM_058181 HPRD:10754 YBEY C21orf57 ybeY metallopeptidase (putative) protein-coding 0.130742 0.732394 7(ACTTCCGGTTCG,-,0.00) 0(CGGACCGA,+,0.00),94(CCGGTCGG,-,0.00) -27(GCTGCGCA,+,0.00) -149(CCCTGGCGCCGG,-,0.00),-143(CGCCGGCCCAGC,-,0.00) -151(GCCCCTGGCGCC,-,0.00) 561_WT_peak_7077 chr8 98656423 98656880 + 90 NA 5' UTR (NM_178812, exon 1 of 12) 5' UTR (NM_178812, exon 1 of 12) 244 NM_178812 92140 Hs.377155 NM_178812 HPRD:17459 MTDH 3D3|AEG-1|AEG1|LYRIC|LYRIC/3D3 metadherin protein-coding 0.120350 0.735808 106(CGCCCCGGCGTC,+,0.00),200(CGGCCCGGCTGC,+,0.00) -64(GGCGGCGGAG,+,0.00) -86(CCCGCCTCCCGG,+,0.00),-85(CCGCCTCCCGGG,+,0.00),-21(CCGCCCTCCCCG,+,0.00) -130(GGCGCCGA,-,0.00),256(GGCCTCGA,-,0.00) -141(GGCCTGGCGCTG,-,0.00),-135(GCGCTGGCGCCG,-,0.00),268(GGGCTGGAGCCG,-,0.00) 223(TCGGTCGG,-,0.00) 61(GCCCGGCCCT,+,0.00) 17(CGGCGCGA,-,0.00) 53(GTTACCCG,-,0.00) -145(GCGGGGCCTGGC,+,0.00),-134(CGCTGGCGCCGA,-,0.00),-20(CGCCCTCCCCGC,-,0.00),-10(GCGGTGGCAGCG,+,0.00),173(AGCTGGCCCAGC,-,0.00) 96(TGCGTCTCCGCG,-,0.00) 196(GGCTCGGCCC,-,0.00) -126(CCGAGACG,-,0.00) -143(GGGGCCTGGCGC,+,0.00),199(TCGGCCCGGCTG,+,0.00) 561_WT_peak_6925 chr8 2049720 2049946 + 90 NA intron (NM_003970, intron 20 of 36) intron (NM_003970, intron 20 of 36) 25164 NR_106983 102465695 NR_106983 MIR7160 hsa-mir-7160 microRNA 7160 ncRNA 0.017699 0.594714 -7(AGGCTGAGAGGG,-,0.00) 561_WT_peak_5284 chr3 149530315 149530865 + 90 NA 5' UTR (NM_007282, exon 1 of 11) 5' UTR (NM_007282, exon 1 of 11) 115 NM_183381 11342 Hs.12333 NM_007282 HPRD:11503 RNF13 RZF ring finger protein 13 protein-coding 0.074545 0.647913 303(AGACGCCT,-,0.00) 333(CAGGGAAGACGG,-,0.00) 218(CGGCAGGCGCCC,-,0.00) 24(TAGGTCGG,-,0.00),141(CAGACCGA,+,0.00),145(CCGACCGG,+,0.00) -105(TCGGGCCG,+,0.00) 274(CAGCTTCTTCAG,-,0.00) -137(GAGCCAGGCCTC,-,0.00),90(CAGCCCGGCAGC,-,0.00) 561_WT_peak_5927 chr5 134181807 134181998 + 90 NA 5' UTR (NM_001135586, exon 1 of 2) 5' UTR (NM_001135586, exon 1 of 2) 244 NM_001135586 134553 Hs.708536 NM_152409 HPRD:08226 C5orf24 - chromosome 5 open reading frame 24 protein-coding 0.125654 0.765625 16(AGAGGCCT,-,0.00) -37(CCGGGAGCGGGG,-,0.00) -19(GGCGGCGA,-,0.00) -142(CGGCGCCAGCAC,+,0.00) -136(CAGCACGA,-,0.00) -151(GGGAGGGAGCGG,+,0.00),9(GGGGAGAAGAGG,+,0.00) -57(TGCGCGGG,-,0.00) -143(GCGGCGCCAGCA,+,0.00) -91(GGGCCGGGCT,+,0.00) -117(GCTGGGAAGC,+,0.00) 561_WT_peak_5498 chr4 71705476 71705692 + 90 NA promoter-TSS (NM_002092) promoter-TSS (NM_002092) 43 NM_002092 2926 Hs.309763 NM_002092 HPRD:07276 GRSF1 - G-rich RNA sequence binding factor 1 protein-coding 0.087963 0.718894 -145(CAGCCGCAGCCC,+,0.00) 11(GCCGCGGG,+,0.00) -108(GCGTGCCG,+,0.00) -135(CCCGGAGCAGCG,+,0.00) -103(CCGGCCATGGAC,+,0.00) 561_WT_peak_3120 chr17 33307921 33308320 + 90 NA intron (NM_002311, intron 1 of 19) CpG 603 NM_013975 3980 Hs.100299 NM_002311 HPRD:02966 LIG3 LIG2 ligase III, DNA, ATP-dependent protein-coding 0.092732 0.662500 -49(GCCGGGGG,+,0.00) 96(CGGAACGA,-,0.00) -19(CACTGTCCCCGC,-,0.00) 59(CTTCTCGG,+,0.00) 38(CGGCCAGGCCTC,-,0.00) 561_WT_peak_4752 chr21 26934041 26934308 + 90 NA promoter-TSS (NR_001458) promoter-TSS (NR_001458) -283 NR_001458 114614 Hs.697120 NR_001458 ENSG00000234883 MIR155HG BIC|MIRHG2|NCRNA00172 MIR155 host gene (non-protein coding) ncRNA 0.063670 0.526119 -115(CCGACTGA,+,0.00) -29(GGCGCGGT,-,0.00) 561_WT_peak_5693 chr5 36876643 36876868 + 90 NA promoter-TSS (NM_133433) promoter-TSS (NM_133433) 41 NR_046262 646719 Hs.355684 NR_046262 LOC646719 - uncharacterized LOC646719 ncRNA 0.111111 0.712389 -73(CGCGGCCGAG,+,0.00) -108(CCGCCTCCCGGC,+,0.00) -125(GGCGTAGA,-,0.00) -9(GGGAAGAGGGGG,+,0.00) -75(GGCGCGGC,-,0.00) 561_WT_peak_4478 chr2 220119611 220119777 + 90 NA promoter-TSS (NM_001278552) promoter-TSS (NM_001278552) -364 NM_001278552 7277 Hs.75318 NM_006000 HPRD:01851 TUBA4A H2-ALPHA|TUBA1 tubulin, alpha 4a protein-coding 0.018072 0.497006 -16(GCTTTCTCTTTC,-,0.00) 561_WT_peak_4952 chr22 42486933 42487378 + 90 NA promoter-TSS (NM_002490) promoter-TSS (NM_002490) 218 NR_034118 100132273 Hs.709677 NR_034118 ENSG00000237037 NDUFA6-AS1 - NDUFA6 antisense RNA 1 (head to head) ncRNA 0.092135 0.645740 -59(AGGTCGCT,+,0.00),145(TGGCGGCT,+,0.00) -35(CCGGGGACGCCG,-,0.00),244(CCGGGAGGAAGG,-,0.00) -44(GAGCTGGCGCCG,-,0.00) -26(CCGAGCGA,+,0.00) -71(TCGGGCCG,+,0.00),71(TCGTGGCG,+,0.00),135(TCCTGCCG,+,0.00) -74(CGCTCGGGCCGC,-,0.00),-43(AGCTGGCGCCGG,-,0.00) 72(CGTGGCGG,+,0.00) -86(GCCGCCAGGGGA,+,0.00) 139(GCCGCCTGGCGG,+,0.00) 561_WT_peak_7056 chr8 74433017 74433244 + 90 NA intron (NM_001164381, intron 12 of 13) MLT1L|LTR|ERVL-MaLR 100821 NR_038406 100128126 Hs.679921 NR_038406 ENSG00000253302 STAU2-AS1 - STAU2 antisense RNA 1 ncRNA 0.004405 0.407895 -1(GCATCCTGGCTG,+,0.00) 561_WT_peak_7248 chr9 35072181 35072504 + 90 NA exon (NM_007126, exon 1 of 17) exon (NM_007126, exon 1 of 17) 397 NM_007126 7415 Hs.529782 NM_007126 HPRD:03013 VCP ALS14|HEL-220|HEL-S-70|IBMPFD|IBMPFD1|TERA|p97 valosin containing protein protein-coding 0.133127 0.737654 102(GGCGGTGGGCGA,-,0.00) 133(AAGCGGCT,+,0.00),134(AGCGGCTT,-,0.00) 80(GGGCCGGGGCTC,-,0.00) 70(GCGACCGA,+,0.00) 124(CAAACCCG,+,0.00) 44(CGGGTAAC,+,0.00) -69(TGCGCGGC,-,0.00) -92(GCCAGGCCCCGC,-,0.00) -2(GAAGCCATGGCG,+,0.00),0(AGCCATGGCGCG,-,0.00) -49(GCGCCGCCGC,-,0.00) -94(CGGCCAGGCCCC,-,0.00) 561_WT_peak_2757 chr16 28874336 28874404 + 90 NA promoter-TSS (NM_001145795) promoter-TSS (NM_001145795) -708 NM_001145795 25970 Hs.15744 NM_015503 HPRD:12336 SH2B1 PSM|SH2B SH2B adaptor protein 1 protein-coding 0.073529 0.623188 561_WT_peak_3421 chr18 3604883 3605079 + 90 NA intron (NR_119377, intron 1 of 2) intron (NR_119377, intron 1 of 2) 1246 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA 0.015306 0.436548 561_WT_peak_1552 chr12 3861949 3862208 + 90 NA intron (NM_032680, intron 1 of 10) CpG 288 NM_001144958 84766 Hs.504534 NM_032680 HPRD:10079 CRACR2A EFCAB4B calcium release activated channel regulator 2A protein-coding 0.065637 0.696154 24(CCCGGCCGCC,-,0.00),33(CCCGGCCGCC,-,0.00) -57(TCCAGGCCCT,+,0.00) 22(CCCCCGGC,-,0.00) 37(GCCGCCCA,+,0.00) 14(AGCGCCGCCC,-,0.00) 28(GCCGCCCCGGCC,+,0.00) -13(ACTTCGCAGC,-,0.00) 561_WT_peak_4478-2 chr2 220119280 220119461 + 90 NA promoter-TSS (NM_001278552) promoter-TSS (NM_001278552) -40 NM_001278552 7277 Hs.75318 NM_006000 HPRD:01851 TUBA4A H2-ALPHA|TUBA1 tubulin, alpha 4a protein-coding 0.077348 0.675824 -154(CGCGGCTCGCCG,-,0.00) 561_WT_peak_2102 chr13 111806085 111806318 + 90 NA promoter-TSS (NR_120398) promoter-TSS (NR_120398) 140 NM_003899 8874 Hs.508738 NM_003899 HPRD:05688 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor (GEF) 7 protein-coding 0.141631 0.739316 -70(GGCGTCGC,-,0.00) -66(TCGCTCGG,-,0.00) -68(CGTCGCTC,+,0.00) 58(TGCGCGGC,-,0.00) 561_WT_peak_3181 chr17 40440869 40441085 + 90 NA intron (NM_001288719, intron 1 of 17) CpG 903 NM_001288720 6776 Hs.437058 NM_003152 HPRD:03301 STAT5A MGF|STAT5 signal transducer and activator of transcription 5A protein-coding 0.060185 0.663594 5(GAAACCGGGCCC,-,0.00) -58(GCCGTCGA,-,0.00) -88(CAGCCCCAGCCA,+,0.00) -40(TCGTGGCG,+,0.00) 561_WT_peak_133 chr1 27463770 27463829 + 90 NA intron (NM_003047, intron 1 of 11) MIR3|SINE|MIR 17822 NR_046474 6548 Hs.91389 NM_003047 HPRD:00123 SLC9A1 APNH|NHE-1|NHE1|PPP1R143 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 protein-coding 0.016949 0.550000 561_WT_peak_1663 chr12 46384212 46384682 + 90 NA promoter-TSS (NM_004719) promoter-TSS (NM_004719) -46 NM_004719 9169 Hs.210367 NM_004719 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD-associated factor 11 protein-coding 0.087234 0.662420 33(TCTCCCTCCTCC,+,0.00),36(CCCTCCTCCTCC,+,0.00) -80(GGCGGCGA,-,0.00) -93(TCGGTCCG,-,0.00) 9(TCCCTCCCCT,+,0.00) -12(CCCCCGCC,-,0.00) -27(CCGCTACTCCCC,-,0.00),-18(CCCCTTCCCCCG,-,0.00) -74(GAAGCAGGGAGC,+,0.00) -51(CGCTGCTCCGCG,-,0.00) 192(CCGAGAAG,-,0.00) -79(GCGGCGAAGC,+,0.00) 561_WT_peak_718 chr1 209958086 209958266 + 90 NA promoter-TSS (NM_152485) promoter-TSS (NM_152485) -286 NM_152485 148304 Hs.497642 NM_152485 HPRD:08682 C1orf74 - chromosome 1 open reading frame 74 protein-coding 0.044444 0.508287 561_WT_peak_6295 chr6 33281633 33281839 + 90 NA TTS (NM_001145338).3 TTS (NM_001145338).3 428 NM_172209 6892 Hs.370937 NM_003190 HPRD:09061 TAPBP NGS17|TAPA|TPN|TPSN TAP binding protein (tapasin) protein-coding 0.067961 0.647343 -147(TAGGGACG,-,0.00) 561_WT_peak_556 chr1 156097038 156097208 + 90 NA intron (NM_001282624, intron 2 of 10) intron (NM_001282624, intron 2 of 10) 1215 NM_001257374 4000 Hs.594444 NM_005572 HPRD:01035 LMNA CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|PRO1 lamin A/C protein-coding 0.023529 0.567251 -84(TAGTGGCT,+,0.00) -16(CCCTCTCTGCTC,+,0.00) 561_WT_peak_2380 chr14 103021532 103021789 + 90 NA Intergenic CpG 15679 NR_036192 100422954 NR_036192 miRBase:MI0015837 MIR4309 - microRNA 4309 ncRNA 0.116732 0.759690 -59(GCTTCCGGGTCC,-,0.00) -18(GGCGCCGA,-,0.00) -111(TCGGCCGG,-,0.00) -74(GGCGGGGG,+,0.00),-45(CCCCCGCC,-,0.00) 561_WT_peak_5506 chr4 77910602 77910778 + 90 NA intron (NM_018243, intron 1 of 9) intron (NM_018243, intron 1 of 9) 39795 NM_018243 55752 Hs.128199 NM_018243 HPRD:08555 SEPT11 - septin 11 protein-coding 0.022727 0.406780 561_WT_peak_2038 chr13 48668969 48669429 + 90 NA promoter-TSS (NM_014166) promoter-TSS (NM_014166) 78 NM_014166 29079 Hs.181112 NM_014166 HPRD:16145 MED4 ARC36|DRIP36|HSPC126|TRAP36|VDRIP mediator complex subunit 4 protein-coding 0.091304 0.676790 186(AGAGGCCT,-,0.00) 138(GCGAGAAGGCGG,-,0.00),151(CTCGGAAGGCGG,-,0.00) -155(GAGCTGGCCCTC,-,0.00),-78(CAGCTCCAGCCC,+,0.00) 105(CGCACGCG,-,0.00) -87(CCCCCGGC,-,0.00) 27(CCAAACCG,+,0.00) -86(CCCCGGCCCAGC,-,0.00) 34(GCCTCCCAGC,-,0.00) 561_WT_peak_2454 chr15 44069618 44069835 + 90 NA promoter-TSS (NM_025165) promoter-TSS (NM_025165) -224 NM_025165 80237 Hs.706346 NM_025165 HPRD:10933 ELL3 - elongation factor RNA polymerase II-like 3 protein-coding 0.064516 0.623853 -66(CGGTTGTG,-,0.00) -130(TTTTCCCG,-,0.00) 561_WT_peak_3520 chr18 60829079 60829392 + 90 NA intron (NM_000633, intron 2 of 2) intron (NM_000633, intron 2 of 2) 157378 NM_000633 596 Hs.150749 NM_000633 HPRD:01045 BCL2 Bcl-2|PPP1R50 B-cell CLL/lymphoma 2 protein-coding 0.015974 0.477707 561_WT_peak_2860 chr16 58163055 58163381 + 90 NA promoter-TSS (NM_013242) promoter-TSS (NM_013242) 78 NM_013242 29105 Hs.532755 NM_013242 HPRD:13616 CFAP20 C16orf80|EVORF|GTL3|fSAP23 cilia and flagella associated protein 20 protein-coding 0.098160 0.651376 119(CCGCCCCCCGGG,+,0.00),126(CCGGGAGCGCGG,-,0.00) -131(AGCGTCGA,-,0.00) -39(CGGACGCG,-,0.00),35(CGTCCGCG,-,0.00) -164(CCGACCTA,+,0.00) 109(CCATCTGAGCCC,+,0.00) 51(TTTCCCCG,-,0.00) 561_WT_peak_1727 chr12 56552100 56552344 + 90 NA TTS (NM_002475) TTS (NM_002475) 177 NM_079423 4637 Hs.632717 NM_021019 HPRD:17618 MYL6 ESMLC|LC17|LC17-GI|LC17-NM|LC17A|LC17B|MLC-3|MLC1SM|MLC3NM|MLC3SM myosin, light chain 6, alkali, smooth muscle and non-muscle protein-coding 0.045082 0.620408 561_WT_peak_1042 chr10 74020884 74021269 + 90 NA Intergenic Intergenic -12601 NM_019058 54541 Hs.744875 NM_019058 HPRD:09662 DDIT4 Dig2|REDD-1|REDD1 DNA-damage-inducible transcript 4 protein-coding 0.038961 0.580311 83(CGTACGGG,-,0.00) -126(GAGCTGAGTGGG,-,0.00) -93(CGCTGGCCCCAG,-,0.00) 561_WT_peak_6938 chr8 21455989 21456184 + 90 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA 190260 NM_001495 2675 Hs.441202 NM_001495 HPRD:11801 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding 0.020513 0.612245 561_WT_peak_7021 chr8 54755630 54756079 + 90 NA promoter-TSS (NM_213620) promoter-TSS (NM_213620) 17 NM_015941 51606 Hs.491737 NM_015941 HPRD:10591 ATP6V1H MSTP042|NBP1|SFD|SFDalpha|SFDbeta|VMA13 ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H protein-coding 0.097996 0.697778 -97(AGGCGTCT,+,0.00) -164(CCGGCAGGGAGG,-,0.00) 233(GGCGGCGA,-,0.00) -125(GGGCTGGGGCGC,-,0.00),120(GGGCGGGCGCTG,-,0.00),205(GGGCCCCAGCCA,+,0.00) 118(AGGGGCGGGC,-,0.00) 189(GAGCGACG,-,0.00) -49(GGGAGCCGAAAG,+,0.00) 242(CGTGGCGG,+,0.00) 14(AGCCAGGGCGGC,-,0.00) 131(GCGGCGGGGC,+,0.00) 561_WT_peak_5765 chr5 60457981 60458449 + 90 NA promoter-TSS (NM_001048249) promoter-TSS (NM_001048249) 72 NR_109908 101928630 Hs.575209 NR_109908 CTC-436P18.1 - uncharacterized LOC101928630 ncRNA 0.076923 0.656716 131(CAGACCGGAAGC,+,0.00) 190(AGCCGCCA,-,0.00) 198(GCCGGGCG,+,0.00),290(GGCGGGGG,+,0.00) 150(CGGAAGTCGCGG,+,0.00) -57(CGTCGGCC,+,0.00) 138(GAAGCAGGAAGG,+,0.00) 291(GCGGGGGCAGGG,+,0.00) 218(GGGCCCAGTT,+,0.00) 24(GCGCCGCCGC,-,0.00) 561_WT_peak_2697 chr16 11326865 11327369 + 90 NA Intergenic CpG 22922 NM_003745 8651 Hs.50640 NM_003745 HPRD:04669 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP3 suppressor of cytokine signaling 1 protein-coding 0.057540 0.663366 -61(ACCCCCTCCTCC,+,0.00) 302(GGGCAGGGGCTG,-,0.00) 186(CCGCTGCCTCCG,-,0.00) 148(GCTGCGCA,+,0.00) 187(CGCTGCCTCCGC,-,0.00) 140(GCGGGCGGGCTG,+,0.00) 561_WT_peak_6239 chr6 28697035 28697205 + 90 NA Intergenic tRNA-Ala-GCY_|tRNA|tRNA 134334 NR_033379 401242 Hs.448285 NR_033379 ENSG00000225595 LOC401242 - uncharacterized LOC401242 ncRNA 0.047059 0.497076 -54(TCGACCCC,+,0.00) -50(CCCCCGGC,-,0.00) 561_WT_peak_2968 chr17 1359283 1359669 + 90 NA promoter-TSS (NM_005206) promoter-TSS (NM_005206) 85 NM_016823 1398 Hs.461896 NM_005206 HPRD:01267 CRK CRKII|p38 v-crk avian sarcoma virus CT10 oncogene homolog protein-coding 0.129534 0.746770 142(CCGGGAAGGGGC,-,0.00) 122(TCCCTGCCCG,+,0.00) 18(CCCCCGGC,-,0.00),90(GCCGCGGG,+,0.00),153(CCCGCGGC,-,0.00) -133(CCGTGCCG,+,0.00),-100(TCCTGCCG,+,0.00) 11(CCTCCGGCCCCC,-,0.00) 30(GCCGCCCA,+,0.00),199(ACTGCGCA,+,0.00) -127(CGCTGGCCCTGC,-,0.00) -57(CCGAGTCG,-,0.00) -43(CCCGCCATGGCT,+,0.00),-41(CGCCATGGCTGC,-,0.00),176(GGGCAAGGCGCC,-,0.00) 58(GCTTCACAGC,-,0.00) 561_WT_peak_6376 chr6 76311242 76311503 + 90 NA promoter-TSS (NM_015571) promoter-TSS (NM_015571) -250 NM_015571 26054 Hs.485784 NM_015571 HPRD:05417 SENP6 SSP1|SUSP1 SUMO1/sentrin specific peptidase 6 protein-coding 0.080460 0.618321 31(CGGCGGGCGCCC,-,0.00) -47(TGGGCGGT,-,0.00) 63(GCGCCGCAGC,-,0.00) 561_WT_peak_2241 chr14 61447463 61447920 + 90 NA promoter-TSS (NM_001172702) promoter-TSS (NM_001172702) 106 NM_020810 57570 Hs.380159 NM_020810 HPRD:17213 TRMT5 KIAA1393|TRM5 tRNA methyltransferase 5 protein-coding 0.074398 0.589520 37(CGCGGCCGCC,-,0.00) 237(TCCAGGCCCT,+,0.00),268(AGGGCCGGGC,-,0.00) 77(CGTCGCTC,+,0.00) -146(CGGTTTTC,-,0.00) 35(AACGCGGCCG,-,0.00),156(GGGCGGGTCT,+,0.00),269(GGGCCGGGCT,+,0.00) -65(CTAGGCGG,+,0.00),188(CCGCGAAG,-,0.00) 81(GCTCTGCAGC,-,0.00) 561_WT_peak_4820 chr21 47744123 47744368 + 90 NA promoter-TSS (NM_058180) promoter-TSS (NM_058180) 209 NM_006031 5116 Hs.474069 NM_006031 HPRD:05804 PCNT KEN|MOPD2|PCN|PCNT2|PCNTB|PCTN2|SCKL4 pericentrin protein-coding 0.106122 0.678862 57(AGCCGCCT,-,0.00) -104(CCGGGAGGACGA,-,0.00) 4(GTCCGGCG,-,0.00) 35(TTTTCCCG,-,0.00) 41(CGCCGGCTCCGC,-,0.00) 561_WT_peak_3635 chr19 12833201 12833681 + 89 NA promoter-TSS (NM_013433) promoter-TSS (NM_013433) 21 NM_001136196 30000 Hs.416049 NM_013433 ENSG00000105576 TNPO2 IPO3|KPNB2B|TRN2 transportin 2 protein-coding 0.089583 0.594595 -129(GGGGTCGA,-,0.00),-125(TCGACGCA,+,0.00) -133(GGCGGGGG,+,0.00) -112(GGGCCAAGAGGG,-,0.00) -79(CTTACCCG,-,0.00) -10(GGGAGCCAAAGA,+,0.00) 60(AACGCGGCCG,-,0.00) 561_WT_peak_4684 chr20 50017091 50017363 + 89 NA intron (NM_001258296, intron 9 of 10) intron (NM_001258296, intron 9 of 10) 52287 NR_036162 100422889 NR_036162 MIR3194 - microRNA 3194 ncRNA 0.033088 0.542125 -12(ACACCCTCCTCC,+,0.00) -48(AGGCCCGAAATC,+,0.00) 2(AGGTGGCT,+,0.00) -129(GCTTCCTGTTTA,-,0.00) 561_WT_peak_4664 chr20 47538320 47538628 + 89 NA exon (NM_006420, exon 1 of 39) exon (NM_006420, exon 1 of 39) 199 NM_006420 10564 Hs.62578 NM_006420 HPRD:09250 ARFGEF2 BIG2|PVNH2|dJ1164I10.1 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) protein-coding 0.116883 0.754045 -138(GACGCCGGGCCC,-,0.00) -142(CCGGGACGCCGG,-,0.00),-99(CCGCCCGCCCGC,+,0.00) -161(CGGACGCG,-,0.00) 61(TCGGTGGG,-,0.00) -76(CCCCCGCC,-,0.00) 106(CGTCGGCC,+,0.00) 35(GCTGCGCA,+,0.00) -136(CGCCGGGCCCGC,-,0.00),-71(GCCGGGCCGGGG,+,0.00) 14(GAAGCGGCCC,-,0.00) 1(CCGACAAG,-,0.00),125(CTACTCGG,+,0.00) 78(CCCGCCCTGCCC,+,0.00) -73(CCGCCGGGCCGG,-,0.00) 561_WT_peak_3477 chr18 29665310 29665487 + 89 NA Intergenic AluSq2|SINE|Alu -6420 NM_016271 51444 Hs.302408 NM_016271 HPRD:11508 RNF138 HSD-4|NARF|STRIN|hNARF ring finger protein 138, E3 ubiquitin protein ligase protein-coding 0.000000 0.516854 561_WT_peak_5457 chr4 40202711 40202928 + 89 NA intron (NM_001278362, intron 2 of 3) intron (NM_001278362, intron 2 of 3) 4292 NM_001278363 399 Hs.654594 NM_004310 RHOH ARHH|TTF ras homolog family member H protein-coding 0.018433 0.371560 561_WT_peak_6648 chr7 41921267 41921731 + 89 NA Intergenic Arthur1B|DNA|hAT-Tip100 -178793 NM_002192 3624 Hs.583348 NM_002192 INHBA EDF|FRP inhibin, beta A protein-coding 0.021552 0.453763 -55(AAGCCGTT,+,0.00) -78(GGGGGCCGTAGG,+,0.00) 131(GAAACAGAAAGG,+,0.00),137(GAAAGGGGAAGC,+,0.00) 561_WT_peak_5709 chr5 40798026 40798287 + 89 NA intron (NM_206907, intron 1 of 9) CpG 141 NM_206907 5562 Hs.43322 NM_006251 HPRD:04115 PRKAA1 AMPK|AMPKa1 protein kinase, AMP-activated, alpha 1 catalytic subunit protein-coding 0.076628 0.645038 -138(GCCCAGCCCT,+,0.00) -109(GGCGGGGG,+,0.00) -74(TCGTGCGG,+,0.00) 34(TTCACCCG,-,0.00) 57(CTTCTCGG,+,0.00) -67(GCTCCTCAGC,-,0.00) 561_WT_peak_6688 chr7 65958775 65958970 + 89 NA Intergenic CpG -93477 NR_026873 285908 Hs.50755 NM_181722 HPRD:14160 LINC00174 NCRNA00174 long intergenic non-protein coding RNA 174 ncRNA 0.076923 0.637755 -38(AAGCGGCT,+,0.00) -48(GCTGCGCA,+,0.00) 561_WT_peak_6781 chr7 100888025 100888237 + 89 NA intron (NM_016068, intron 1 of 4) CpG 240 NM_016068 51024 Hs.423968 NM_016068 HPRD:12352 FIS1 TTC11 fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae) protein-coding 0.061321 0.690141 -103(CCGGGCAGGAGC,-,0.00),-34(CCGGGAGGAGGG,-,0.00) -71(GGGAGCCGTAGT,+,0.00) 561_WT_peak_6979 chr8 37756652 37756967 + 89 NA exon (NM_025151, exon 1 of 5) exon (NM_025151, exon 1 of 5) 206 NM_025151 80223 Hs.191179 NM_025151 HPRD:09787 RAB11FIP1 NOEL1A|RCP|rab11-FIP1 RAB11 family interacting protein 1 (class I) protein-coding 0.120635 0.727848 -111(GGCGGCCGCG,+,0.00) -158(TCGAGGCC,+,0.00) 15(CGCGTACG,+,0.00),17(CGTACGCG,-,0.00) -107(GCCGCGGG,+,0.00) 29(TCGTGCCC,+,0.00) 23(CGTCGCTC,+,0.00) 52(CGCAGGCCCCGC,-,0.00),109(CCCAGGCCCCGG,-,0.00) -28(CCGACACG,-,0.00) -44(GCGCCCAGGCTG,+,0.00),107(CCCCCAGGCCCC,-,0.00) 561_WT_peak_5397 chr4 2470217 2470539 + 89 NA promoter-TSS (NM_002938) promoter-TSS (NM_002938) -417 NM_001185010 6047 Hs.66394 NM_002938 HPRD:04167 RNF4 SLX5|SNURF ring finger protein 4 protein-coding 0.102484 0.696594 49(TGCGTCGA,-,0.00) -16(AGAGCCGGGA,-,0.00) 14(CGGGACGA,-,0.00) -141(CGCCGGCCCAGG,-,0.00) 0(CGCGGAACGGCG,+,0.00) 145(GTCCCTGGCGGC,-,0.00) 561_WT_peak_1309 chr11 61159894 61160227 + 89 NA 5' UTR (NM_016499, exon 1 of 5) 5' UTR (NM_016499, exon 1 of 5) 195 NM_016499 51259 Hs.26745 NM_016499 HPRD:14439 TMEM216 - transmembrane protein 216 protein-coding 0.096096 0.676647 -29(GGGGCCGGAAAC,+,0.00) -15(AGGCCGCT,+,0.00) -153(GGCGTCGT,-,0.00) -105(CCGAGCGA,+,0.00),121(TCGGTCGC,-,0.00) -45(GCCGCGGG,+,0.00) 17(CGCTGCTCCGGG,-,0.00) -87(CGGCCAGGCCCG,-,0.00),-20(AACCCAGGCCGC,-,0.00) 561_WT_peak_3568 chr19 2269394 2269753 + 89 NA promoter-TSS (NM_004152) promoter-TSS (NM_004152) 88 NM_004152 4946 Hs.446427 NM_004152 HPRD:03346 OAZ1 AZI|OAZ ornithine decarboxylase antizyme 1 protein-coding 0.119777 0.691667 -54(GGCGGCAGAG,+,0.00) 139(ATGCCGCT,+,0.00) -111(TCGCGTTCCCGG,+,0.00) 122(TCCACGCC,+,0.00) -135(CCCGCGGC,-,0.00) -119(TCGTGCGG,+,0.00) -148(TTTTCCCG,-,0.00) -142(CGGCGGCCCCGC,-,0.00),-20(GCGGCGGCGGCG,+,0.00) -141(GGCGGCCCCGCG,-,0.00),-133(CGCGGCTCTGCC,-,0.00) -137(GCCCCGCGGC,-,0.00),-17(GCGGCGGCGC,+,0.00) 561_WT_peak_5586 chr4 120375408 120375989 + 89 NA promoter-TSS (NR_037630) promoter-TSS (NR_037630) -240 NR_037630 645513 Hs.677546 NR_037630 ENSG00000245958 LOC645513 - uncharacterized LOC645513 ncRNA 0.075731 0.623711 121(AGGTCGCT,+,0.00) 216(CGTCGCCA,+,0.00) 15(GCGGCGCCAGAC,+,0.00) 7(CCGCCTCG,-,0.00) -94(GCTGGGGGGC,+,0.00),383(GCGGCGGGGC,+,0.00) 383(GCGGCGGGGCTG,+,0.00) 561_WT_peak_4976 chr22 50964739 50964989 + 89 NA promoter-TSS (NM_005138) promoter-TSS (NM_005138) 4 NM_001169109 9997 Hs.180903 NM_005138 HPRD:05042 SCO2 CEMCOX1|MYP6|SCO1L SCO2 cytochrome c oxidase assembly protein protein-coding 0.132000 0.784861 -127(TCCACGCC,+,0.00) 62(CCCCCGCC,-,0.00) 25(GGCGCGGC,-,0.00) 42(GCGGCCCCAGCG,+,0.00) -87(GGGCCGAGCC,+,0.00) 561_WT_peak_4007 chr2 28582452 28582725 + 89 NA Intergenic Intergenic -33191 NM_005253 2355 Hs.220971 NM_005253 FOSL2 FRA2 FOS-like antigen 2 protein-coding 0.047619 0.583942 -121(AGAGACTT,-,0.00) -144(GGGCGGCTTC,+,0.00) -33(TGCCATGGCGGG,-,0.00) 78(CCTGCGAGGC,+,0.00) 561_WT_peak_54 chr1 10490344 10490613 + 89 NA promoter-TSS (NR_037187) promoter-TSS (NR_037187) 319 NM_199294 378708 Hs.412311 NM_199294 APITD1 CENP-S|CENPS|FAAP16|MHF1 apoptosis-inducing, TAF9-like domain 1 protein-coding 0.141264 0.744444 72(GGAGGAGGCGGA,-,0.00) -159(CGCCCGGC,-,0.00) -20(TCGCGCCG,+,0.00) -26(CGTCGCTC,+,0.00) 24(CCTTCTCGGCCC,+,0.00) -113(GGCCGACG,-,0.00) -9(CGGGAAAA,+,0.00) 8(GCCGCGCA,+,0.00) -86(GCGCCGCCAGGG,+,0.00),-23(CGCTCGCGCCGC,-,0.00),3(ACCTGGCCGCGC,-,0.00) -60(GGCGGAGCTGCG,+,0.00) -61(GGGCGGAGCT,+,0.00) 25(CTTCTCGG,+,0.00) -84(GCCGCCAGGGGG,+,0.00) -127(GGGGGCTGGCTG,+,0.00) 561_WT_peak_1599 chr12 12161254 12161535 + 89 NA Intergenic Intergenic -62484 NM_138723 79370 Hs.210343 NM_030766 HPRD:05841 BCL2L14 BCLG BCL2-like 14 (apoptosis facilitator) protein-coding 0.010676 0.421986 -150(CAAAACCA,+,0.00) 561_WT_peak_6671 chr7 54826964 54827264 + 89 NA promoter-TSS (NM_014302) promoter-TSS (NM_014302) 108 NR_110040 100996654 Hs.127991 NR_110040 LOC100996654 - uncharacterized LOC100996654 ncRNA 0.080000 0.584718 47(AGCGGCCT,-,0.00),76(TAGCGGCT,+,0.00) -155(CTTACGCG,-,0.00) -116(CGCCCGGC,-,0.00) 34(CAGCACGA,-,0.00) 55(TGCGCGGT,-,0.00) 561_WT_peak_526 chr1 151735942 151736167 + 89 NA promoter-TSS (NM_001301371) promoter-TSS (NM_001301371) 98 NM_001301371 51686 Hs.713789 NM_016178 HPRD:18670 OAZ3 AZ3|OAZ-t|TISP15 ornithine decarboxylase antizyme 3 protein-coding 0.088889 0.619469 -113(GGCGTCGG,-,0.00) -93(CCCCCGCC,-,0.00) -105(CGGCAGGA,-,0.00) -158(GCCGCCATGTTC,+,0.00) 561_WT_peak_3001 chr17 5323331 5323695 + 89 NA promoter-TSS (NM_002532) promoter-TSS (NM_002532) -454 NM_002532 4927 Hs.584784 NM_002532 HPRD:03974 NUP88 - nucleoporin 88kDa protein-coding 0.082418 0.616438 188(TAGCCCTGCTCC,+,0.00) 101(AGAGGCTT,-,0.00) 167(CCGTCTTCCCTG,+,0.00) 87(TCGCCGCC,+,0.00) 152(TCGTCCCG,+,0.00) 23(CCGCGAAG,-,0.00) 561_WT_peak_1498 chr11 118175238 118175684 + 89 NA 5' UTR (NM_000733, exon 1 of 9) 5' UTR (NM_000733, exon 1 of 9) 166 NM_000733 916 Hs.3003 NM_000733 HPRD:08923 CD3E IMD18|T3E|TCRE CD3e molecule, epsilon (CD3-TCR complex) protein-coding 0.008969 0.492170 -34(AGGCCTCT,+,0.00),13(AGAGGCCT,-,0.00),15(AGGCCTCT,+,0.00) 56(CCCTCCCAGCCT,+,0.00) 187(CTGTTTTG,-,0.00) 561_WT_peak_6392 chr6 89855794 89856379 + 89 NA exon (NM_001010853, exon 1 of 7) exon (NM_001010853, exon 1 of 7) 317 NM_001010853 135293 Hs.356247 NM_001010853 HPRD:16473 PM20D2 ACY1L2|bA63L7.3 peptidase M20 domain containing 2 protein-coding 0.124786 0.755973 -91(AGGCCCGGAGGG,+,0.00),254(CTGCCCGGCATC,+,0.00) -146(TGCGGCCGAG,+,0.00),4(GGCGGCCGAG,+,0.00),307(GGCGGCCGCG,+,0.00) 401(CCGACTGCCCGG,+,0.00) 202(GAGCGCCACGCC,+,0.00) 241(CGAGTACG,+,0.00) 189(AGGCCCGGGC,-,0.00) 116(CCCGCGGC,-,0.00) -156(GGTCGCTA,+,0.00) -123(GGGCGCAGAGGG,-,0.00),331(GGCCTTAGAGGG,-,0.00) 244(GTACGACG,-,0.00) 177(GGGAGCCGCCGG,+,0.00) -142(GCCGAGCCAGGG,+,0.00) 24(CCCTGAGCCGCG,+,0.00) -80(GGAGCGGCCC,-,0.00) 1(CGAGGCGG,+,0.00) 308(GCGGCCGCGCTG,+,0.00),378(GGGGCCCGGGTG,+,0.00) 561_WT_peak_1464 chr11 102187792 102188090 + 89 NA promoter-TSS (NM_001165) promoter-TSS (NM_001165) -240 NM_182962 330 Hs.127799 NM_001165 HPRD:03426 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding 0.030201 0.458194 -132(CGTGTAAA,+,0.00) 17(CCGCGAAG,-,0.00) 561_WT_peak_6352 chr6 53409450 53409879 + 89 NA 5' UTR (NM_001498, exon 1 of 16) 5' UTR (NM_001498, exon 1 of 16) 263 NM_001197115 2729 Hs.654465 NM_001498 HPRD:06032 GCLC GCL|GCS|GLCL|GLCLC glutamate-cysteine ligase, catalytic subunit protein-coding 0.137529 0.760465 -163(CCCTCCTCCTCC,+,0.00),-160(TCCTCCTCCTCC,+,0.00),-157(TCCTCCTCCTCC,+,0.00),-154(TCCTCCTCCTCC,+,0.00),-151(TCCTCCTCCTCC,+,0.00),-37(GGCGGAGGGAGG,-,0.00),103(TCGCCCTCCCCG,+,0.00) 90(CGGCCCGGCGGC,+,0.00) -99(CTCAGCCGCC,-,0.00) -83(AGGCGGCT,+,0.00) -13(CCGGCTCCCCGG,+,0.00),103(TCGCCCTCCCCG,+,0.00) -80(CGGCTGCCGCTC,-,0.00) -50(TCGGGCCG,+,0.00) 33(GTCCGACG,-,0.00),144(CGGCGGAC,+,0.00) 227(CAAAACCT,+,0.00) -16(GCTCCGGCTCCC,-,0.00),48(CGGAGGCGAAGG,+,0.00) 104(CGCCCTCCCCGC,-,0.00),137(GCGGCGGCGGCG,+,0.00) 160(CGCGCTGCCGCG,+,0.00) 4(GCCCCTGGCGCC,-,0.00) 235(GCGCCGCCGC,-,0.00),240(GCCGCGGAGC,+,0.00) 561_WT_peak_1176 chr11 191986 192178 + 89 NA promoter-TSS (NM_145651) promoter-TSS (NM_145651) -998 NM_001097610 653486 Hs.127059 NM_001097610 LOC653486 - secretoglobin, family 1C, member 1-like protein-coding 0.020833 0.487047 21(AGCCACTA,-,0.00) 561_WT_peak_5556 chr4 99584308 99584577 + 89 NA Intergenic MLT1L|LTR|ERVL-MaLR -4630 NM_005723 10098 Hs.118118 NM_005723 HPRD:15513 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding 0.011152 0.481481 561_WT_peak_2216 chr14 54907915 54908312 + 89 NA promoter-TSS (NM_005776) promoter-TSS (NM_005776) 35 NM_005776 10175 Hs.294603 NM_005776 HPRD:16730 CNIH1 CNIH|CNIH-1|CNIL|TGAM77 cornichon family AMPA receptor auxiliary protein 1 protein-coding 0.093199 0.635678 143(ATGGCCGGAGTC,+,0.00) -31(CTGGGGAGGAGG,-,0.00) 86(CGGCGCCAGCCC,+,0.00),111(GCGCACCAGCCC,+,0.00) -51(CGCGAACG,+,0.00) 49(CCCCCGGC,-,0.00) 95(CCCTCTCAGCGC,+,0.00) 30(TGGGTAAA,+,0.00) 85(GCGGCGCCAGCC,+,0.00) -17(CGGGGAGCGGCG,+,0.00) -151(CCGCCTCG,-,0.00) -39(CGCCATGGCTGG,-,0.00) 117(CAGCCCAGCCGC,-,0.00) 561_WT_peak_741 chr1 224179973 224180246 + 89 NA Intergenic Intergenic -121680 NR_049764 23219 Hs.64691 NM_015176 HPRD:12367 FBXO28 CENP-30|Fbx28 F-box protein 28 protein-coding 0.036630 0.551095 -43(CTCGGCCGCG,-,0.00) 67(AGGTCGCT,+,0.00) -39(GCCGCGCC,+,0.00) -47(CCGCCTCG,-,0.00) -123(GCTGGGGGGC,+,0.00) 561_WT_peak_551 chr1 155657945 155658666 + 89 NA promoter-TSS (NM_004632) promoter-TSS (NM_004632) 142 NM_001198904 55249 Hs.584927 NM_018253 HPRD:08485 YY1AP1 HCCA1|HCCA2|YAP|YY1AP YY1 associated protein 1 protein-coding 0.097087 0.686981 86(TCCCACTCCTCC,+,0.00),93(CCTCCCTCCTCG,+,0.00) 135(GACTCCGGCCAT,-,0.00) 509(TGGCGGCT,+,0.00) 390(CCTCCCTCCCCG,+,0.00) 347(CGGCGCGAGCCC,+,0.00) 151(CGCGCACG,+,0.00),165(CGCACGCG,-,0.00),169(CGCGTACG,+,0.00),171(CGTACGAG,-,0.00),246(CCCGTACG,+,0.00),248(CGTACGCG,-,0.00),334(CGCGTACC,+,0.00),465(CGCGTGCG,+,0.00) 347(CGGCGCGA,-,0.00) 69(TAGCGACA,-,0.00),191(CGTCGCTG,+,0.00) 292(CCCCCTCAGACC,+,0.00),393(CCCTCCCCGCCC,+,0.00) -128(CGGGTAAG,+,0.00) 149(AGCGCGCA,+,0.00) 3(GCGGCGGCAGCG,+,0.00),346(GCGGCGCGAGCC,+,0.00) 561_WT_peak_7030 chr8 59720654 59720847 + 89 NA exon (NM_014729, exon 8 of 9) exon (NM_014729, exon 8 of 9) -148346 NM_003580 8439 Hs.372000 NM_003580 HPRD:09117 NSMAF FAN neutral sphingomyelinase (N-SMase) activation associated factor protein-coding 0.041451 0.515464 -109(CGGTTGTG,-,0.00) 561_WT_peak_7462 chr9 133588418 133588745 + 89 NA promoter-TSS (NM_007313) promoter-TSS (NM_007313) -687 NM_007313 25 Hs.431048 NM_005157 HPRD:01809 ABL1 ABL|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding 0.097859 0.734756 -142(GGCGGCCGCG,+,0.00),90(GGCGGCCGGG,+,0.00) -95(AGCCGGTT,-,0.00) 41(CGGGGGAGGGGG,-,0.00) -138(GCCGCGGG,+,0.00),-39(GGCGGGGG,+,0.00),39(GCCGGGGG,+,0.00) 34(CCGGGGCCGGGG,+,0.00) -148(CATCATGGCGGC,-,0.00) -74(GCTGAGGAGC,+,0.00) 561_WT_peak_856 chr10 4868468 4868713 + 89 NA intron (NM_001271021, intron 1 of 7) CpG 221 NM_001040177 83592 Hs.657944 NM_031436 HPRD:07472 AKR1E2 AKR1CL2|AKRDC1|LoopADR|hTSP|htAKR aldo-keto reductase family 1, member E2 protein-coding 0.134694 0.784553 41(CCGACGCC,+,0.00) -157(CGCGTGCG,+,0.00) -64(CGGGCAGGGA,-,0.00) 39(GGCCGACG,-,0.00) 71(GCCGCCCA,+,0.00) -121(GCGGCCATGGGA,+,0.00) -147(GCGGCGGGGC,+,0.00),-139(GCGGCGGGGC,+,0.00) 561_WT_peak_6903 chr7 151047291 151047532 + 89 NA intron (NM_016118, intron 3 of 14) LTR13|LTR|ERVK 8564 NM_001243351 51667 Hs.647082 NM_016118 HPRD:07450 NUB1 BS4|NUB1L|NYREN18 negative regulator of ubiquitin-like proteins 1 protein-coding 0.033195 0.586777 -119(AGGCCTCT,+,0.00) 561_WT_peak_3878 chr19 52407992 52408288 + 89 NA intron (NM_023074, intron 1 of 4) intron (NM_023074, intron 1 of 4) 165 NM_023074 65251 Hs.148322 NM_023074 HPRD:07785 ZNF649 - zinc finger protein 649 protein-coding 0.064189 0.595960 89(GGCGGACGAG,+,0.00) -112(CGCCGGAC,+,0.00),88(CGGCGGAC,+,0.00) -76(ACCGCCCA,+,0.00) 80(GCCTATGGCGGC,-,0.00) -74(CGCCCAGGCCGC,-,0.00) 561_WT_peak_2565 chr15 78557205 78557394 + 89 NA intron (NM_018602, intron 2 of 7) CpG 310 NM_001130182 55466 Hs.513053 NM_018602 HPRD:09920 DNAJA4 MST104|MSTP104|PRO1472 DnaJ (Hsp40) homolog, subfamily A, member 4 protein-coding 0.100529 0.710526 -147(GGATGAGGGCGA,-,0.00) -111(CGGGCCGGGC,-,0.00) -110(GGGCCGGGCT,+,0.00),-47(GAGCCGCGTT,+,0.00) -9(GGGGCCAGGCCG,+,0.00),-8(GGGCCAGGCCGG,-,0.00) 561_WT_peak_4939 chr22 41809326 41809901 + 89 NA Intergenic CpG 31680 NM_003216 7008 Hs.181159 NM_003216 HPRD:01783 TEF - thyrotrophic embryonic factor protein-coding 0.104348 0.690972 135(GGAGGAGGAGGG,-,0.00) 104(CCGAGGAGGAGG,-,0.00) 247(GCGGTCGG,-,0.00) 5(GGCGGGGG,+,0.00),15(GCCGCGGG,+,0.00) -8(CGGCGCGA,-,0.00),395(CGGCACGG,-,0.00) 102(GTCCGAGG,-,0.00),266(CGGCGGAC,+,0.00) -74(CAAAAGCG,+,0.00) 256(GCCGCCCA,+,0.00),384(GGCGCGGC,-,0.00) 6(GCGGGGGCAGCC,+,0.00),18(GCGGGGCCTCGG,+,0.00) 17(CGCGGGGCCTCG,+,0.00) -25(GCCTCGCCGC,-,0.00),15(GCCGCGGGGC,+,0.00) -27(CAGCCTCGCCGC,-,0.00),63(CGGCCGGGCCCC,-,0.00) 561_WT_peak_3012 chr17 7209940 7210321 + 89 NA promoter-TSS (NM_001970) promoter-TSS (NM_001970) -188 NM_001143760 1984 Hs.534314 NM_001970 HPRD:02555 EIF5A EIF-5A|EIF5A1|eIF5AI eukaryotic translation initiation factor 5A protein-coding 0.049869 0.528796 -119(CTCGGCCTCC,-,0.00) -77(CGCCCGGC,-,0.00) 118(GTCCGCCG,-,0.00) 145(CGGGTGAA,+,0.00) -81(ACCGCGCC,+,0.00) -123(CCGCCTCG,-,0.00),140(CTTCTCGG,+,0.00) 561_WT_peak_2759 chr16 28936798 28937057 + 89 NA promoter-TSS (NM_024816) promoter-TSS (NM_024816) -395 NM_024816 79874 Hs.555978 NM_024816 HPRD:17948 RABEP2 FRA rabaptin, RAB GTPase binding effector protein 2 protein-coding 0.100386 0.684615 -63(CCGCCCGA,+,0.00) -114(CCCTCGCTGCCC,+,0.00) 31(GCTTCATTTTTC,-,0.00) -110(CGCTGCCCCTGC,-,0.00),-98(CCGGAGCCAGCC,+,0.00) 20(GGGCCGGGTC,+,0.00) 60(CCGCGTAG,-,0.00) 561_WT_peak_4181 chr2 86947062 86947439 + 89 NA promoter-TSS (NM_022780) promoter-TSS (NM_022780) -164 NM_022780 64795 Hs.75277 NM_022780 HPRD:07841 RMND5A CTLH|GID2|GID2A|RMD5|p44CTLH required for meiotic nuclear division 5 homolog A (S. cerevisiae) protein-coding 0.103448 0.682540 183(TCCCCCTCCCCC,+,0.00) -106(AGGGCCGGTTTC,+,0.00) -52(GCGCTGGGGCTG,-,0.00) -105(GGGCCGGTTT,+,0.00) 561_WT_peak_3429 chr18 9117353 9117642 + 89 NA intron (NM_021074, intron 1 of 7) intron (NM_021074, intron 1 of 7) 14869 NM_021074 4729 Hs.464572 NM_021074 HPRD:02757 NDUFV2 CI-24k NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa protein-coding 0.006920 0.400000 561_WT_peak_4322 chr2 145274748 145275191 + 89 NA non-coding (NR_033258, exon 2 of 3) non-coding (NR_033258, exon 2 of 3) -2212 NR_040248 100303491 Hs.560789 NR_040248 ENSG00000238057 ZEB2-AS1 ZEB2-AS|ZEB2AS|ZEB2NAT ZEB2 antisense RNA 1 ncRNA 0.094808 0.648649 -137(TCCCCCTCCTTC,+,0.00) -102(TGGCCCGGAAAA,+,0.00) 211(CCCCCTCCCCGC,+,0.00) 41(TCGGCGCC,+,0.00) -115(TCGAGCCG,+,0.00) 213(CCCTCCCCGCCC,+,0.00) 134(GCCGCCCA,+,0.00) 147(GCCGGGCCAGGG,+,0.00) -159(CCGCCTCG,-,0.00),-110(CCGCGTAG,-,0.00) 151(GGCCAGGGCCCC,-,0.00) 561_WT_peak_1823 chr12 99038365 99038661 + 89 NA promoter-TSS (NM_001160) promoter-TSS (NM_001160) 316 NM_153687 121457 Hs.252543 NM_153687 HPRD:08092 IKBIP IKIP IKBKB interacting protein protein-coding 0.074324 0.690236 92(CCCTCTCCCCGG,+,0.00) 37(TGGGCGGT,-,0.00),46(ACCGCGCC,+,0.00),70(ACCGCCCA,+,0.00) -126(CCCTCGCTCCGC,-,0.00),-112(CCCGGGCTCCGC,-,0.00) -155(CGCTGCTCCGGG,-,0.00) 12(GCCGCCTTGGCG,+,0.00) -107(GCTCCGCAGC,-,0.00) 561_WT_peak_7104 chr8 103876705 103877046 + 89 NA promoter-TSS (NM_148174) promoter-TSS (NM_148174) -478 NM_015878 51582 Hs.459106 NM_015878 HPRD:07443 AZIN1 OAZI|OAZIN|ODC1L antizyme inhibitor 1 protein-coding 0.096774 0.687135 -148(CTCGGGCGCC,-,0.00) -8(TCGGCGCC,+,0.00) -160(CCCCCGCC,-,0.00) 19(CAGCTCCCTCCG,-,0.00) 48(TTTACCCT,-,0.00) -129(GCTGCGGGGC,+,0.00),0(GCTGCCGAGC,+,0.00) 561_WT_peak_3499 chr18 47013559 47013847 + 89 NA promoter-TSS (NR_031720) promoter-TSS (NR_031720) -40 NR_031720 100302257 NR_031720 miRBase:MI0007260 MIR1539 MIRN1539|hsa-mir-1539 microRNA 1539 ncRNA 0.107639 0.657439 14(GCTTCCGGCTCT,-,0.00) 3(GGCGCGGC,-,0.00) 6(GCGGCGAGGC,+,0.00),78(GCTTCGCTGC,-,0.00) 561_WT_peak_7047 chr8 67973985 67974323 + 89 NA exon (NM_006837, exon 1 of 8) exon (NM_006837, exon 1 of 8) 408 NM_006837 10987 Hs.491912 NM_006837 HPRD:06888 COPS5 CSN5|JAB1|MOV-34|SGN5 COP9 signalosome subunit 5 protein-coding 0.059172 0.572271 -44(TCGCCGCC,+,0.00) -94(TCCCTCCCCT,+,0.00) 106(CGTCTCTA,+,0.00),133(CCTCGCTA,+,0.00) 75(GCCGCCATCGCC,+,0.00) -47(GCTTCGCCGC,-,0.00) 561_WT_peak_5450 chr4 39355384 39355817 + 89 NA intron (NM_002913, intron 1 of 24) intron (NM_002913, intron 1 of 24) 12401 NM_001204747 5981 Hs.507475 NM_002913 HPRD:00024 RFC1 A1|MHCBFB|PO-GA|RECC1|RFC|RFC140 replication factor C (activator 1) 1, 145kDa protein-coding 0.009238 0.370968 164(TTTACCCT,-,0.00) 561_WT_peak_1823-2 chr12 99038768 99038803 + 89 NA promoter-TSS (NM_001160) promoter-TSS (NM_001160) 44 NM_153687 121457 Hs.252543 NM_153687 HPRD:08092 IKBIP IKIP IKBKB interacting protein protein-coding 0.142857 0.805556 -164(CGCGCAGGCCGA,-,0.00),-142(GGAGGAGGGGCA,-,0.00) -146(CCGAGGAGGAGG,-,0.00) -158(GGCCGACG,-,0.00) 561_WT_peak_1278 chr11 47788268 47788740 + 89 NA intron (NM_015308, intron 1 of 16) CpG 489 NM_015308 23360 Hs.6834 NM_015308 HPRD:10996 FNBP4 FBP30 formin binding protein 4 protein-coding 0.114407 0.712474 95(TCGCCCGCCTCC,+,0.00) 32(CGGCCCGGAGCC,+,0.00),287(GAGTCCGGCTCA,-,0.00) 94(CTCGCCCGCC,-,0.00) 243(TCGTCGCC,+,0.00),246(TCGCCGCC,+,0.00) -156(CGCGCACG,+,0.00),-154(CGCACGCG,-,0.00) 205(GTCCGAGG,-,0.00) -112(CAAAACCG,+,0.00) -158(GCCGCGCA,+,0.00),174(CCCGCGCA,+,0.00) 12(AACTCGGCCT,-,0.00) 41(GCCCAGGGCCGC,-,0.00),211(GGCCGCGGCGGC,-,0.00) 72(CAGGCAGGCCTC,-,0.00),260(GCGGGCTGGCTG,+,0.00) 561_WT_peak_335 chr1 98854166 98854277 + 89 NA Intergenic Intergenic 177954 NR_046088 729987 Hs.683961 NR_046088 ENSG00000226053 LOC729987 - uncharacterized LOC729987 ncRNA 0.009009 0.392857 -123(AACCACTT,-,0.00) 561_WT_peak_2242 chr14 61747501 61747671 + 89 NA exon (NM_001017970, exon 1 of 1) exon (NM_001017970, exon 1 of 1) 944 NM_001017970 161291 Hs.146180 NM_001017970 HPRD:18567 TMEM30B CDC50B transmembrane protein 30B protein-coding 0.100000 0.672515 -78(CGAGCAGGGGGG,-,0.00) -59(GCCCGGCCCT,+,0.00) -60(CGCCCGGC,-,0.00) -57(CCGGCCCTGGCC,+,0.00) 561_WT_peak_1377 chr11 66024732 66025086 + 89 NA promoter-TSS (NM_001134774) promoter-TSS (NM_001134774) 144 NM_001134775 64837 Hs.280792 NM_022822 HPRD:13917 KLC2 - kinesin light chain 2 protein-coding 0.093220 0.661972 120(TGCGGCCGAG,+,0.00) 141(GGGCTGGCGGGC,-,0.00) 108(CCCGCGGC,-,0.00) -59(AGCGCGCA,+,0.00) -152(GCGGAGCCTGGG,+,0.00),147(GCGGGCCCTGGG,+,0.00) -106(CTTCTCGG,+,0.00) 43(GGCGCCATGGCG,+,0.00),45(CGCCATGGCGCC,-,0.00) 106(GCCCCGCGGC,-,0.00) 561_WT_peak_3982 chr2 24583224 24583765 + 89 NA promoter-TSS (NM_147152) promoter-TSS (NM_147152) -97 NM_006277 50618 Hs.432562 NM_006277 HPRD:09193 ITSN2 PRO2015|SH3D1B|SH3P18|SWA|SWAP intersectin 2 protein-coding 0.094270 0.717712 -121(CTCTGCCGCC,-,0.00),2(GGCGGCCGCG,+,0.00) -110(TCGCCGCC,+,0.00) -143(GGGCAGGCGCGG,-,0.00) 179(TCGGTCGG,-,0.00) 49(CGGGCCGGGC,-,0.00) 25(GCCGGGGG,+,0.00) -21(CCGCCTCAGCCC,+,0.00),198(TCCTCTCTGCCC,+,0.00) 187(GTCCGAAG,-,0.00) 335(GGGTTTTG,-,0.00) -115(CGCCGTCGCCGC,-,0.00),-29(CGCCGGCGCCGC,-,0.00) 123(CGTGGCTCCTCG,-,0.00) 174(CCGAGTCG,-,0.00),175(CGAGTCGG,+,0.00) -117(GCCGCCGTCGCC,+,0.00),-4(CAACATGGCGGC,-,0.00) -155(CAGCCTGGGCGC,-,0.00) 561_WT_peak_3104 chr17 28659188 28659565 + 89 NA intron (NM_206832, intron 1 of 6) intron (NM_206832, intron 1 of 6) 1689 NM_206832 388364 Hs.371005 NM_206832 HPRD:18274 TMIGD1 TMIGD|UNQ9372 transmembrane and immunoglobulin domain containing 1 protein-coding 0.007958 0.373016 -154(TGGTTTTG,-,0.00) 561_WT_peak_5684 chr5 34008426 34008611 + 89 NA promoter-TSS (NM_203382) promoter-TSS (NM_203382) -298 NM_014324 23600 Hs.508343 NM_014324 HPRD:05134 AMACR AMACRD|CBAS4|RACE|RM alpha-methylacyl-CoA racemase protein-coding 0.048649 0.494624 -38(AAGCGTTT,+,0.00) -126(GATCCCCAGCCC,+,0.00) 561_WT_peak_1173 chr10 135462597 135462891 + 89 NA Intergenic Intergenic -22445 NM_001080998 441581 Hs.690471 NM_001080998 ENSG00000225899 FRG2B - FSHD region gene 2 family, member B protein-coding 0.040816 0.586441 19(AGGGCTGGGA,-,0.00) -57(CCTCTTCCTCCG,-,0.00) 20(GGGCTGGGAGTG,-,0.00) 70(CGCGGAGCCTCG,+,0.00) 561_WT_peak_2683 chr16 4588841 4589095 + 89 NA promoter-TSS (NM_013399) promoter-TSS (NM_013399) -152 NM_001199056 29965 Hs.654653 NM_013399 HPRD:12676 CDIP1 C16orf5|CDIP|I1|LITAFL cell death-inducing p53 target 1 protein-coding 0.051181 0.552941 11(AGGGCAGGGC,-,0.00) 561_WT_peak_100 chr1 23670598 23670797 + 89 NA intron (NM_001297620, intron 1 of 9) CpG 160 NM_001102398 10236 Hs.373763 NM_005826 HPRD:06228 HNRNPR HNRPR|hnRNP-R heterogeneous nuclear ribonucleoprotein R protein-coding 0.130653 0.740000 -39(GCAGCCGGGCCC,-,0.00) 18(GCGCGCCACCCC,+,0.00) -96(TCCCGGCCCC,+,0.00) -73(CGGCGCGA,-,0.00) -121(GGGCTGAGTCGG,-,0.00),-56(GGGCAGAGCGGG,-,0.00) -38(CAGCCGGGCCCG,-,0.00) 561_WT_peak_617 chr1 171711300 171711653 + 89 NA promoter-TSS (NM_003762) promoter-TSS (NM_003762) -97 NM_003762 8674 Hs.6651 NM_003762 HPRD:06070 VAMP4 VAMP-4|VAMP24 vesicle-associated membrane protein 4 protein-coding 0.067989 0.576271 -51(CGTGGAGGGCGA,-,0.00),-34(GGAGGAGTGGGA,-,0.00) 6(GCCGCGCC,+,0.00) 112(GGCTCGCAGC,-,0.00) 561_WT_peak_1964 chr13 26760459 26760652 + 88 NA Intergenic CpG 35339 NM_183044 6049 Hs.136885 NM_005977 HPRD:05027 RNF6 - ring finger protein (C3H2C3 type) 6 protein-coding 0.124352 0.680412 10(AGACGCTT,-,0.00) -104(CCCGCGGC,-,0.00),-56(GCCGGGGG,+,0.00) -100(CGGCAGGA,-,0.00) -34(CGTGGGCCCCGC,-,0.00) -29(GCCCCGCAGC,-,0.00),14(GCTTCGGAGC,-,0.00) 561_WT_peak_6816 chr7 107384655 107384916 + 88 NA intron (NM_001284291, intron 1 of 5) CpG 643 NR_024199 79872 Hs.592271 NM_024814 HPRD:07590 CBLL1 HAKAI|RNF188 Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase protein-coding 0.053640 0.641221 -149(GGCCTGGGGCTG,-,0.00) 4(CCGTGCCG,+,0.00) -161(GCCCCCTTGGCC,+,0.00) 561_WT_peak_7505 chrX 14048178 14048277 + 88 NA promoter-TSS (NM_001042480) promoter-TSS (NM_001042480) -192 NM_001042480 54960 Hs.592237 NM_017856 HPRD:06533 GEMIN8 FAM51A1 gem (nuclear organelle) associated protein 8 protein-coding 0.121212 0.790000 -83(TCGGACGG,-,0.00) -91(GCCGGGGG,+,0.00) -145(CGGCGGAGAGGG,-,0.00) -85(GGTCGGAC,+,0.00),-84(GTCGGACG,-,0.00) -152(GCGGGGCCGGCG,+,0.00) 561_WT_peak_5561 chr4 100777399 100777573 + 88 NA intron (NM_014395, intron 4 of 8) L2a|LINE|L2 38217 NR_024170 8649 Hs.433332 NM_021970 HPRD:04485 LAMTOR3 MAP2K1IP1|MAPBP|MAPKSP1|MP1|PRO0633|Ragulator3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 protein-coding 0.000000 0.468571 -102(AGGCCTCT,+,0.00) -124(GGGGAGAAGAGG,+,0.00) 561_WT_peak_2215 chr14 53619756 53619939 + 88 NA promoter-TSS (NR_110062) promoter-TSS (NR_110062) 199 NM_001160147 80821 Hs.125525 NM_030637 HPRD:07482 DDHD1 PA-PLA1|PAPLA1|SPG28 DDHD domain containing 1 protein-coding 0.147541 0.695652 -35(TCAACGCC,+,0.00) -124(CCCGCGGC,-,0.00) -23(CCCTCTCCACCC,+,0.00) -82(GTCCGGCG,-,0.00) -115(CGGGTAAT,+,0.00) -140(CGGGGCTCCGTG,-,0.00),-71(CGCGGAGCCGTG,+,0.00) -159(CCGCCTCG,-,0.00) -160(GCCGCCTCGGCC,+,0.00) 561_WT_peak_5069 chr3 40566450 40566797 + 88 NA 5' UTR (NM_198484, exon 1 of 5) 5' UTR (NM_198484, exon 1 of 5) 254 NM_001098414 285268 Hs.19977 NM_198484 ZNF621 - zinc finger protein 621 protein-coding 0.072046 0.643678 -164(CCTTCCGGCTCG,-,0.00) -53(TGGCGGCT,+,0.00),48(AGGTGGCT,+,0.00) -6(GCCCGCCCCT,+,0.00) 6(TTCACCCG,-,0.00) 139(CCTCTGGCTCCC,-,0.00) -58(GCCCCTGGCGGC,-,0.00),-16(CCCAATGGCGGC,-,0.00) 561_WT_peak_5952 chr5 138940908 138941313 + 88 NA 5' UTR (NM_003339, exon 1 of 7) 5' UTR (NM_003339, exon 1 of 7) 359 NM_181838 7322 Hs.108332 NM_003339 HPRD:04268 UBE2D2 E2(17)KB2|PUBC1|UBC4|UBC4/5|UBCH4|UBCH5B ubiquitin-conjugating enzyme E2D 2 protein-coding 0.116049 0.729064 -47(GCCGGCCGAG,+,0.00) 63(TGGCGGCT,+,0.00) -126(CCGCCCGCCCGC,+,0.00) 76(GGCGGCGA,-,0.00) 142(GGGCCCCGGCCC,+,0.00) -60(CCGACCAA,+,0.00),-46(CCGGCCGA,+,0.00),203(CCGACCGA,+,0.00) 145(CCCCGGCCCT,+,0.00) 198(TCCTGCCG,+,0.00) 133(GAGCTGAGTGGG,-,0.00) -155(CTCCGACG,-,0.00),-62(GTCCGACC,-,0.00),165(CGCCGGAC,+,0.00) 5(CGGTTTAG,-,0.00) 225(CCTCAGGCTCCC,-,0.00) 50(GCGGCGGCGGCG,+,0.00),165(CGCCGGACCCGC,-,0.00) 217(CGAGGCGG,+,0.00) -136(GCGGCGCAGC,+,0.00),-136(GCGGCGCAGC,-,0.00) -130(CAGCCCGCCCGC,-,0.00) 561_WT_peak_4424 chr2 198380458 198380768 + 88 NA promoter-TSS (NM_015387) promoter-TSS (NM_015387) -154 NM_001100819 25843 Hs.633165 NM_015387 HPRD:10165 MOB4 2C4D|MOB1|MOB3|MOBKL3|PHOCN|PREI3 MOB family member 4, phocein protein-coding 0.119355 0.700965 18(TCTCCCTCCGCC,+,0.00) -13(CCGACGCC,+,0.00) -58(TCGTGGCG,+,0.00) 39(TCTACCCG,-,0.00) 128(CCCGCGCA,+,0.00) 25(CCGCCTAG,-,0.00) -82(GCCCCGCAGC,-,0.00) 561_WT_peak_1548 chr12 1905450 1905883 + 88 NA intron (NM_172364, intron 35 of 37) CpG -23767 NM_001163926 654429 Hs.585579 NM_001039029 ENSG00000166159 LRTM2 - leucine-rich repeats and transmembrane domains 2 protein-coding 0.071594 0.619816 -76(CAGCCTTCACGG,+,0.00) -141(GAGCGCCTCCCC,+,0.00) -147(CCTACCGA,+,0.00) 188(CAGCACGA,-,0.00) -124(TGGGCGGT,-,0.00),182(CCCGCGCA,+,0.00) 21(GCGGGGGAGC,+,0.00) 561_WT_peak_950 chr10 35416369 35416566 + 88 NA promoter-TSS (NM_183060) promoter-TSS (NM_183060) 82 NM_181571 1390 Hs.200250 NM_001881 HPRD:00444 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding 0.081218 0.601010 -27(CGGATTTG,-,0.00) -120(GGGACGAGTT,+,0.00) 561_WT_peak_3166 chr17 38252217 38252651 + 88 NA intron (NM_021724, intron 4 of 7) intron (NM_021724, intron 4 of 7) 4544 NM_021724 9572 Hs.724 NM_021724 HPRD:03873 NR1D1 EAR1|THRA1|THRAL|ear-1|hRev nuclear receptor subfamily 1, group D, member 1 protein-coding 0.016129 0.510345 561_WT_peak_6015 chr5 170815525 170815816 + 88 NA intron (NM_001037738, intron 1 of 9) intron (NM_001037738, intron 1 of 9) 962 NM_199185 4869 Hs.557550 NM_002520 HPRD:01246 NPM1 B23|NPM nucleophosmin (nucleolar phosphoprotein B23, numatrin) protein-coding 0.051546 0.602740 -149(GGCGCGGC,-,0.00),-144(GGCGCGGC,-,0.00) -147(CGCGGCGCGGCG,+,0.00),-147(CGCGGCGCGGCG,-,0.00) 561_WT_peak_7225 chr9 19999538 19999736 + 88 NA Intergenic Intergenic -212620 NM_020344 25769 Hs.283014 NM_020344 HPRD:15351 SLC24A2 NCKX2 solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 protein-coding 0.005051 0.417085 561_WT_peak_864 chr10 6094630 6094873 + 88 NA intron (NM_000417, intron 1 of 7) intron (NM_000417, intron 1 of 7) 9582 NM_000417 3559 Hs.231367 NM_000417 HPRD:00986 IL2RA CD25|IDDM10|IL2R|TCGFR|p55 interleukin 2 receptor, alpha protein-coding 0.020576 0.512295 -118(AGCGGCTT,-,0.00) 7(CTGTTTTG,-,0.00) 561_WT_peak_6375 chr6 75953264 75953674 + 88 NA non-coding (NR_029466, exon 1 of 4) non-coding (NR_029466, exon 1 of 4) 175 NM_001865 1347 Hs.70312 NM_001865 HPRD:00482 COX7A2 COX7AL|COX7AL1|COXVIIAL|COXVIIa-L|VIIAL cytochrome c oxidase subunit VIIa polypeptide 2 (liver) protein-coding 0.060976 0.547445 133(CTTTCCGGGCCG,-,0.00) -101(AGCCGCCT,-,0.00),148(AGAGGCTT,-,0.00) 150(AGGCTTGCGCTC,-,0.00) 227(CCGTCTCAGTCC,+,0.00) -96(CCTTCGGCACCC,-,0.00) 561_WT_peak_453 chr1 146373513 146373549 + 88 NA promoter-TSS (NM_001278141) promoter-TSS (NM_001278141) -326 NM_001278141 149013 Hs.666981 NM_001278141 ENSG00000186275 NBPF12 COAS1|KIAA1245 neuroblastoma breakpoint family, member 12 protein-coding 0.194444 0.810811 -145(GCCGCGGG,+,0.00) -140(GGGCGGAGCC,+,0.00) 561_WT_peak_2700 chr16 12629988 12630214 + 88 NA intron (NM_032167, intron 20 of 20) intron (NM_032167, intron 20 of 20) -184077 NR_039869 100616195 NR_039869 miRBase:MI0017353 MIR4718 - microRNA 4718 ncRNA 0.022124 0.449339 561_WT_peak_4930 chr22 40796255 40796442 + 88 NA intron (NM_015705, intron 1 of 21) intron (NM_015705, intron 1 of 21) 29753 NM_015705 27352 Hs.474914 NM_015705 HPRD:15285 SGSM3 MAP|RABGAP5|RUSC3|RUTBC3|RabGAP-5 small G protein signaling modulator 3 protein-coding 0.048128 0.505319 -12(GGAGGCCGAG,+,0.00) -52(GCCGGGCG,+,0.00) -48(GGCGCGGT,-,0.00) 561_WT_peak_2718 chr16 20752891 20753191 + 88 NA exon (NM_017736, exon 1 of 4) exon (NM_017736, exon 1 of 4) 158 NM_017736 55623 Hs.700004 NM_017736 HPRD:08619 THUMPD1 - THUMP domain containing 1 protein-coding 0.100000 0.641196 119(GGCCTCGA,-,0.00),123(TCGAAGCC,+,0.00) 72(CGGCGCGA,-,0.00) 98(GAGCGACG,-,0.00) 88(CGTCGGAT,+,0.00) -1(GCCGCCATGGTG,+,0.00) -91(GCGTCGCAGC,-,0.00) -32(GCCGCCAGGCTG,+,0.00) 561_WT_peak_1076 chr10 86088899 86089311 + 88 NA intron (NM_001284241, intron 1 of 2) intron (NM_001284241, intron 1 of 2) 760 NM_001284241 54462 Hs.461988 NM_018999 HPRD:13832 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine-rich protein 2 protein-coding 0.021845 0.447942 134(CCGACCAA,+,0.00) -151(CGGGGCTCCCCG,-,0.00) 561_WT_peak_4297 chr2 130939612 130939791 + 88 NA promoter-TSS (NM_001171083) promoter-TSS (NM_001171083) 200 NM_025029 80097 Hs.469925 NM_025029 HPRD:07857 MZT2B FAM128B|MOZART2B mitotic spindle organizing protein 2B protein-coding 0.111732 0.722222 -67(CCGCGGAGGCGG,-,0.00),-47(CCGCGCTCCCGC,+,0.00) -41(TCCCGCCCCT,+,0.00) -39(CCGCCCCTCCCG,-,0.00) -55(CCCCGTCCCCGC,-,0.00) -31(CCCGCCAGGGCA,+,0.00) 561_WT_peak_4218 chr2 97073249 97073518 + 88 NA Intergenic Intergenic 71904 NM_015341 23397 Hs.308045 NM_015341 HPRD:03820 NCAPH BRRN1|CAP-H non-SMC condensin I complex, subunit H protein-coding 0.029740 0.585185 -14(AAGCGGAT,+,0.00),24(AGCCACTT,-,0.00) 35(GTCGCCCTGGCC,+,0.00) 561_WT_peak_6111 chr6 16323063 16323308 + 88 NA intron (NM_001128164, intron 7 of 7) intron (NM_001128164, intron 7 of 7) 84374 NM_006877 2766 Hs.484741 NM_006877 HPRD:00754 GMPR GMPR1 guanosine monophosphate reductase protein-coding 0.032653 0.548780 -158(AGCCGATT,-,0.00) -4(TAGCCACG,-,0.00) 63(GCACCCTGGCTG,+,0.00) 561_WT_peak_6432 chr6 109761989 109762166 + 88 NA non-coding (NR_104429, exon 1 of 9) non-coding (NR_104429, exon 1 of 9) 146 NM_003080 6610 Hs.55235 NM_003080 HPRD:04608 SMPD2 ISC1|NSMASE|NSMASE1 sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase) protein-coding 0.124294 0.730337 -2(GGGGGAACGCGG,-,0.00) -5(GCCGGGGG,+,0.00) -141(GCCGCCCA,+,0.00) -38(GCGGCCCGCCTG,+,0.00) 561_WT_peak_6347 chr6 52849186 52849360 + 88 NA exon (NM_001512, exon 5 of 7) exon (NM_001512, exon 5 of 7) 10905 NM_001512 2941 Hs.485557 NM_001512 HPRD:06899 GSTA4 GSTA4-4|GTA4 glutathione S-transferase alpha 4 protein-coding 0.000000 0.417143 -40(AACCACTT,-,0.00) 561_WT_peak_4537 chr20 414309 414568 + 88 NA Intergenic MER21C|LTR|ERVL 25729 NM_031229 10616 Hs.247280 NM_006462 HPRD:16643 RBCK1 C20orf18|HOIL-1|HOIL1|PBMEI|RBCK2|RNF54|UBCE7IP3|XAP3|XAP4|ZRANB4 RanBP-type and C3HC4-type zinc finger containing 1 protein-coding 0.007722 0.561538 561_WT_peak_2439 chr15 41407924 41408452 + 88 NA non-coding (NR_104038, exon 1 of 35) non-coding (NR_104038, exon 1 of 35) 256 NR_104038 54617 Hs.292949 NM_017553 HPRD:10024 INO80 INO80A|INOC1|hINO80 INO80 complex subunit protein-coding 0.107955 0.716446 115(GGCGGAGGGGGG,-,0.00) -145(GACCCCGGGTCT,-,0.00) 112(GGCGGCGGAG,+,0.00) 284(AGGCGGCT,+,0.00) 220(GGCGTGGA,-,0.00) -33(AGGGCCGGGG,-,0.00) -30(GCCGGGGG,+,0.00) 84(TCGGGCCG,+,0.00) 199(CGTGGGAC,+,0.00) -123(GAAACGGGAAGG,+,0.00) 91(GCCTGGCCCCGC,-,0.00),297(CGCTGGGCCGGC,-,0.00),298(GCTGGGCCGGCG,+,0.00),307(GCGGCGGCGGCG,+,0.00) 171(GGTGGAGCCGCG,+,0.00),248(CGCGGCTCCTGG,-,0.00) -7(GACGCGGCCC,-,0.00),136(GGGCGGGGTC,+,0.00) 105(CCGCGACG,-,0.00) 96(GCCCCGCCGC,-,0.00),272(GCGGCGGCGC,+,0.00) 89(CCGCCTGGCCCC,-,0.00) 561_WT_peak_2137 chr14 23503751 23504171 + 88 NA exon (NM_002797, exon 1 of 3) exon (NM_002797, exon 1 of 3) 393 NM_001144932 5693 Hs.422990 NM_002797 HPRD:02629 PSMB5 LMPX|MB1|X proteasome (prosome, macropain) subunit, beta type, 5 protein-coding 0.059524 0.612827 -135(CCAGCCTCCGCC,+,0.00) -149(CCGAACGA,+,0.00) 100(CTGCACGA,-,0.00) -164(CAAAACTG,+,0.00) 45(GGCGCGGC,-,0.00) 46(GCGCGGCCAGGC,+,0.00) -86(GCTGGGAGGC,+,0.00) -39(GGGGGCTGGCTC,+,0.00),48(GCGGCCAGGCTC,+,0.00) 561_WT_peak_5921 chr5 133861715 133862012 + 88 NA promoter-TSS (NM_015288) promoter-TSS (NM_015288) 65 NM_015288 23338 Hs.732155 NM_015288 HPRD:15124 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding 0.063973 0.583893 53(GCGGGGAGGCTG,-,0.00) -25(GCGCGGAGAGGG,-,0.00),59(AGGCTGAGAGGG,-,0.00) -123(CGTTTTTG,-,0.00) 561_WT_peak_5815 chr5 74807574 74807891 + 88 NA promoter-TSS (NM_031361) promoter-TSS (NM_031361) 74 NM_001130105 10087 Hs.270437 NM_005713 HPRD:05246 COL4A3BP CERT|CERTL|GPBP|STARD11 collagen, type IV, alpha 3 (Goodpasture antigen) binding protein protein-coding 0.085174 0.632075 -151(CGGCTCTCCCGG,+,0.00) 45(TCAGTCGG,-,0.00),49(TCGGTGGG,-,0.00) -49(CGTCGCTC,+,0.00) -52(GTCCGTCG,-,0.00) -132(CGGGTAGA,+,0.00) -155(CCTCCGGCTCTC,-,0.00) 561_WT_peak_5948 chr5 138725654 138726007 + 88 NA promoter-TSS (NM_016459) promoter-TSS (NM_016459) -225 NM_016459 51237 Hs.409563 NM_016459 HPRD:17815 MZB1 MEDA-7|PACAP|pERp1 marginal zone B and B1 cell-specific protein protein-coding 0.014164 0.553672 -145(CCATCCTCCTCC,+,0.00) 147(CTGCCTCTTCCG,-,0.00) -66(CCATCTCAGCTC,+,0.00) 561_WT_peak_2522 chr15 66790012 66790296 + 88 NA promoter-TSS (NM_006049) promoter-TSS (NM_006049) -8 NM_006049 10302 Hs.30174 NM_006049 HPRD:16183 SNAPC5 SNAP19 small nuclear RNA activating complex, polypeptide 5, 19kDa protein-coding 0.091549 0.663158 -20(GCGGGGAGGCGG,-,0.00) -44(TCGCCGCC,+,0.00) -134(TGCGCAGT,-,0.00) -51(GACGCCATCGCC,+,0.00) 561_WT_peak_6990 chr8 41685998 41686255 + 88 NA intron (NM_001142446, intron 1 of 42) CpG -30986 NM_020476 286 Hs.654438 NM_000037 HPRD:01693 ANK1 ANK|SPH1|SPH2 ankyrin 1, erythrocytic protein-coding 0.054475 0.573643 -49(AGGCCTCT,+,0.00) 64(GAAACAGGAACT,+,0.00) 561_WT_peak_3292 chr17 61516996 61517313 + 88 NA intron (NM_001915, intron 1 of 5) L1ME4a|LINE|L1 1053 NM_001017917 1534 Hs.355264 NM_001915 HPRD:02485 CYB561 CYB561A1|FRRS2 cytochrome b561 protein-coding 0.018927 0.408805 -134(CACCTTCTTCCT,-,0.00) 561_WT_peak_654 chr1 184859584 184859752 + 88 NA intron (NM_052966, intron 3 of 13) intron (NM_052966, intron 3 of 13) 84050 NM_052966 116496 Hs.518662 NM_052966 HPRD:10725 FAM129A C1orf24|NIBAN family with sequence similarity 129, member A protein-coding 0.011905 0.402367 -147(TTTACCCT,-,0.00) 561_WT_peak_3136 chr17 34900810 34901127 + 88 NA intron (NM_024835, intron 1 of 13) CpG 231 NM_024835 79893 Hs.514116 NM_024835 HPRD:18337 GGNBP2 DIF-3|DIF3|LCRG1|LZK1|ZFP403|ZNF403 gametogenetin binding protein 2 protein-coding 0.094637 0.710692 25(GGGGTCGA,-,0.00) 105(GGGGAGAAGGGG,+,0.00) -84(TAGCGAGG,-,0.00) -108(GTAACAGGGAGC,+,0.00) 11(CGCAGAGCCGCT,+,0.00) 43(GGGCGGGGTC,+,0.00) -36(CCGAGAAG,-,0.00) -144(CGCCCAGGCCGG,-,0.00) 561_WT_peak_122 chr1 26946784 26947107 + 87 NA Intergenic CpG 65912 NR_031740 100302190 NR_031740 MIR1976 hsa-mir-1976 microRNA 1976 ncRNA 0.099071 0.731481 99(GCGGGGGCGCGG,-,0.00) -80(CCGACGCC,+,0.00) 50(TCCCTCCCCT,+,0.00) 1(GGCGGGGG,+,0.00),98(GGCGGGGG,+,0.00) -39(TGGGCGGC,-,0.00) -69(CTCGGAGCCCCG,+,0.00) 18(GAAGCCGCCC,-,0.00) -102(GGCCCCGGCGGC,-,0.00) 561_WT_peak_323 chr1 93003554 93003763 + 87 NA intron (NM_005665, intron 17 of 17) intron (NM_005665, intron 17 of 17) -51225 NM_005263 2672 Hs.73172 NM_005263 HPRD:07527 GFI1 GFI-1|GFI1A|SCN2|ZNF163 growth factor independent 1 transcription repressor protein-coding 0.000000 0.371429 -107(TTTACCTG,-,0.00) 561_WT_peak_4177 chr2 86412702 86412894 + 87 NA intron (NM_001100170, intron 1 of 14) MLT1G3-int|LTR|ERVL-MaLR 7433 NR_039939 100616159 NR_039939 MIR4779 - microRNA 4779 ncRNA 0.000000 0.362694 561_WT_peak_1159 chr10 121355759 121356431 + 87 NA 5' UTR (NM_003252, exon 1 of 12) 5' UTR (NM_003252, exon 1 of 12) 446 NM_001033925 7073 Hs.501203 NM_003252 TIAL1 TCBP|TIAR TIA1 cytotoxic granule-associated RNA binding protein-like 1 protein-coding 0.078869 0.679049 119(GGAGGAAGGGGA,-,0.00),239(GGAGGAGGAGGA,-,0.00),242(GGAGGAGGAGGA,-,0.00),245(GGAGGAGGATGA,-,0.00) 24(GAGTCCGGGGCT,-,0.00) 381(GGCCGCCGAG,+,0.00) -84(AGCCGCCT,-,0.00) -105(TCCACGCC,+,0.00) 358(ACGACCGA,+,0.00),443(CCGGCCGA,+,0.00) -22(GCCCGGGCCT,+,0.00) 118(GGGAGGAAGGGG,+,0.00) 424(CGTCGCTG,+,0.00) 60(GTGCGACG,-,0.00) 475(CGGGCAAA,+,0.00) -82(CCGCCTAG,-,0.00),7(CGTCTCGG,+,0.00) -100(GCCGCCCTGGTC,+,0.00) 276(CAGCCAGGCAGG,-,0.00) 561_WT_peak_7285 chr9 70646374 70646605 + 87 NA Intergenic SST1|Satellite|centr -156278 NM_001286836 220869 Hs.355950 NM_001024916 HPRD:14134 CBWD5 DC36 COBW domain containing 5 protein-coding 0.095238 0.672414 58(GGCGGCGA,-,0.00) -74(CCCCCGGC,-,0.00) 37(GCTGCGGACC,+,0.00) 561_WT_peak_6251 chr6 29691282 29691540 + 87 NA intron (NM_018950, intron 1 of 6).5 CpG 294 NM_001098478 3134 Hs.519972 NM_018950 HPRD:00884 HLA-F CDA12|HLA-5.4|HLA-CDA12|HLAF major histocompatibility complex, class I, F protein-coding 0.093023 0.698842 -62(AGCCGCCT,-,0.00) -160(CTGACCGA,+,0.00) 34(GCCGCGGG,+,0.00) 38(CGGGGAGCCCCG,+,0.00) 26(GCGGCCCGGCCG,+,0.00),27(CGGCCCGGCCGC,-,0.00) 561_WT_peak_4870-2 chr22 29811262 29811318 + 87 NA Intergenic HERVE_a-int|LTR|ERV1 -23282 NM_021026 5988 Hs.648249 NM_021026 HPRD:16182 RFPL1 RNF78 ret finger protein-like 1 protein-coding 0.053571 0.578947 561_WT_peak_4203 chr2 95740449 95740763 + 87 NA Intergenic Intergenic 47148 NM_031902 64969 Hs.655259 NM_031902 HPRD:10099 MRPS5 MRP-S5|S5mt mitochondrial ribosomal protein S5 protein-coding 0.025478 0.558730 -8(CCCTCCCTGCCC,+,0.00) -118(CTGTTTTG,-,0.00) 105(CCGCCAAG,-,0.00) -17(CCTGCGGAGC,+,0.00) 561_WT_peak_134 chr1 27985833 27986053 + 87 NA Intergenic MIRc|SINE|MIR 12781 NM_022872 2537 Hs.523847 NM_002038 HPRD:00959 IFI6 6-16|FAM14C|G1P3|IFI-6-16|IFI616 interferon, alpha-inducible protein 6 protein-coding 0.018182 0.561086 -10(CGGCAGGA,-,0.00) -61(GCCTGGCCCCGG,-,0.00) 561_WT_peak_3502 chr18 47339950 47340179 + 87 NA promoter-TSS (NR_117096) promoter-TSS (NR_117096) 187 NM_006111 10449 Hs.200136 NM_006111 HPRD:10380 ACAA2 DSAEC acetyl-CoA acyltransferase 2 protein-coding 0.069869 0.608696 39(CCAAACCG,+,0.00) -52(GGGAGCCCAGGG,+,0.00) -120(CTTGGCGG,+,0.00) 561_WT_peak_39 chr1 6844425 6844653 + 87 NA promoter-TSS (NM_001242701) promoter-TSS (NM_001242701) -845 NM_015215 23261 Hs.397705 NM_015215 HPRD:16681 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding 0.105263 0.698690 -65(TGAGGAGGGTGG,-,0.00) -49(CTCGGCTGCC,-,0.00),-25(GGCGGCCGGG,+,0.00) -160(CCCACCTCCCGG,+,0.00),-28(CCGGGCGGCCGG,-,0.00) -17(GGGCTGGCGCTT,-,0.00) -136(CCCGTACG,+,0.00),-134(CGTACGCA,-,0.00) 3(TCGGCCGG,-,0.00) 561_WT_peak_6647 chr7 39988842 39989218 + 87 NA promoter-TSS (NM_003718) promoter-TSS (NM_003718) -929 NM_031267 8621 Hs.233552 NM_003718 HPRD:04496 CDK13 CDC2L|CDC2L5|CHED|hCDK13 cyclin-dependent kinase 13 protein-coding 0.082447 0.618037 -73(AGAGCCGGAACC,+,0.00) -56(TGCGCGCT,-,0.00),12(TGGGCGGC,-,0.00),148(TGCGCGGT,-,0.00) 122(GCCCCTGGCGGG,-,0.00) 111(GCGGCCTGCCGG,+,0.00) 561_WT_peak_1848 chr12 110151221 110151433 + 87 NA promoter-TSS (NM_032829) promoter-TSS (NM_032829) -860 NM_032829 84915 Hs.661785 NM_032829 HPRD:07868 FAM222A C12orf34 family with sequence similarity 222, member A protein-coding 0.066038 0.582160 -95(TGGTTTTG,-,0.00) -26(CCGGCGCCGGCG,+,0.00) 25(CCGCCTCG,-,0.00) 561_WT_peak_4895 chr22 36044244 36044774 + 87 NA promoter-TSS (NM_030641) promoter-TSS (NM_030641) 85 NM_030641 80830 Hs.257352 NM_030641 HPRD:06266 APOL6 APOL-VI|APOLVI apolipoprotein L, 6 protein-coding 0.018868 0.544256 287(GGAGGAGGGGGC,-,0.00) 283(CGGGGGAGGAGG,-,0.00) 295(GGGCTGCCGCTC,-,0.00) 151(CACTCACAGCCC,+,0.00) 84(CAGTTTTG,-,0.00) 561_WT_peak_5628 chr4 159593203 159593477 + 87 NA promoter-TSS (NM_004453) promoter-TSS (NM_004453) 67 NR_077235 201725 Hs.380920 NM_001008393 HPRD:17319 C4orf46 RCDG1 chromosome 4 open reading frame 46 protein-coding 0.098540 0.643636 8(TGACCCGGAAGC,+,0.00) -100(CGCGTGCG,+,0.00) 92(GCGGTCGG,-,0.00) -92(TCGTGCTG,+,0.00) -68(CTCTGGCCGCGC,-,0.00) 39(ATCCATGGCGCC,-,0.00) 561_WT_peak_4571 chr20 17949667 17950125 + 87 NA promoter-TSS (NM_014426) promoter-TSS (NM_014426) 134 NM_052865 92667 Hs.320823 NM_052865 HPRD:12783 MGME1 C20orf72|DDK1|MTDPS11|bA504H3.4 mitochondrial genome maintenance exonuclease 1 protein-coding 0.074236 0.575163 135(GAGCGACG,-,0.00) 36(TCCTGGCCCCGC,-,0.00) 561_WT_peak_4989-2 chr3 4892583 4892686 + 87 NA Intergenic Intergenic -47276 NR_037903 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA 0.009709 0.413462 561_WT_peak_3529 chr18 72040658 72041006 + 87 NA Intergenic Intergenic 57722 NM_001174123 644041 Hs.465414 NM_001174123 ENSG00000206043 C18orf63 DKFZP781G0119 chromosome 18 open reading frame 63 protein-coding 0.022989 0.369628 -138(TGGCACGA,-,0.00) 561_WT_peak_4455 chr2 207024648 207025001 + 87 NA promoter-TSS (NM_001199984) promoter-TSS (NM_001199984) 506 NM_001959 1933 Hs.421608 NM_001959 HPRD:02804 EEF1B2 EEF1B|EEF1B1|EF1B eukaryotic translation elongation factor 1 beta 2 protein-coding 0.096317 0.677966 54(GCGGGAGGGAGG,-,0.00),146(CCGGCCTCCGGG,+,0.00) 51(GCCGCGGG,+,0.00) -18(GGGCTGAGTCGG,-,0.00) -157(TGCGCGCT,-,0.00) 16(CCGGGGCCGGGG,+,0.00),69(GCCGGGCCCGGG,+,0.00) 101(AAAGCGCCCC,-,0.00) 41(CGTGTCGG,+,0.00) -138(GCTCCCCAGC,-,0.00) 561_WT_peak_7230 chr9 21334986 21335339 + 87 NA 5' UTR (NM_018847, exon 1 of 1) 5' UTR (NM_018847, exon 1 of 1) 267 NM_018847 55958 Hs.701778 NM_018847 KLHL9 - kelch-like family member 9 protein-coding 0.079320 0.641243 -14(GCGCTGCCGCTC,-,0.00) 153(AGGGCCGGGA,-,0.00) -8(CCGCTCCTTCAG,-,0.00) -47(CGGTTAAA,+,0.00) 32(CCGCCACG,-,0.00) 561_WT_peak_309 chr1 89149948 89150307 + 87 NA 5' UTR (NM_006256, exon 1 of 22) 5' UTR (NM_006256, exon 1 of 22) 205 NM_006256 5586 Hs.440833 NM_006256 HPRD:03972 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding 0.105850 0.663889 113(GGCGGCCGCG,+,0.00) -135(AGAGGCTT,-,0.00),-126(AGGCGGCT,+,0.00),-99(AGCGACTA,-,0.00) -115(GGCGTCGC,-,0.00),-73(GGCGGCGA,-,0.00),154(GGCGTCCA,-,0.00) -5(GCCGCGCC,+,0.00) 561_WT_peak_1669 chr12 47609410 47609676 + 87 NA intron (NR_026544, intron 2 of 2) intron (NR_026544, intron 2 of 2) 683 NR_026544 100233209 Hs.657722 NR_026544 ENSG00000247774 PCED1B-AS1 - PCED1B antisense RNA 1 ncRNA 0.015038 0.513109 -29(AAGCGGTT,+,0.00) -121(AGGCTGGGGCTC,-,0.00) 22(GGGAGGCCAAGG,+,0.00) -14(TGCCATGGTGGC,-,0.00),26(GGCCAAGGCGGG,-,0.00) 561_WT_peak_3467 chr18 21591532 21591748 + 87 NA intron (NR_110796, intron 2 of 5) intron (NR_110796, intron 2 of 5) -2744 NM_001135993 125488 Hs.128576 NM_153211 HPRD:08745 TTC39C C18orf17|HsT2697 tetratricopeptide repeat domain 39C protein-coding 0.004630 0.373272 561_WT_peak_4104 chr2 64880701 64880978 + 87 NA 5' UTR (NM_014755, exon 1 of 2) 5' UTR (NM_014755, exon 1 of 2) 207 NM_014755 9792 Hs.591569 NM_014755 HPRD:18040 SERTAD2 Sei-2|TRIP-Br2 SERTA domain containing 2 protein-coding 0.097473 0.701439 -3(CCGGGGAGCGGG,-,0.00) -131(CCGACGCC,+,0.00) -56(CAGCTACTCCCG,-,0.00) -133(GCCCGACG,-,0.00) 561_WT_peak_2995 chr17 4852834 4853241 + 87 NA promoter-TSS (NM_005022) promoter-TSS (NM_005022) -656 NM_005022 5216 Hs.494691 NM_005022 HPRD:01452 PFN1 ALS18 profilin 1 protein-coding 0.125307 0.735294 -65(GGCGGCCGCG,+,0.00) -104(AGCCACCT,-,0.00) 84(GGCGTCCA,-,0.00),88(TCCACGCC,+,0.00),110(CCGACGCC,+,0.00) 167(TCGGGCGG,-,0.00) -26(AGGGCTGGGC,-,0.00) -49(CCGCCTCCTCCG,-,0.00) 31(GGGCGGAAAGGG,-,0.00) -21(TGGGCGGC,-,0.00) 22(GCGCGGCCCGGG,+,0.00) -20(GGGCGGCTTC,+,0.00),21(AGCGCGGCCC,-,0.00) 190(CGTGGCGG,+,0.00) 24(GCGGCCCGGGCG,+,0.00) 561_WT_peak_4870 chr22 29811099 29811214 + 87 NA Intergenic HERVIP10FH-int|LTR|ERV1 -23416 NM_021026 5988 Hs.648249 NM_021026 HPRD:16182 RFPL1 RNF78 ret finger protein-like 1 protein-coding 0.026087 0.491379 -125(CAAGACCG,+,0.00),-85(CAAAACCA,+,0.00),-79(CAAAACCA,+,0.00) 561_WT_peak_4561 chr20 5930917 5931109 + 87 NA promoter-TSS (NM_182802) promoter-TSS (NM_182802) 191 NM_001281467 51605 Hs.128791 NM_015939 HPRD:13027 TRMT6 GCD10|Gcd10p tRNA methyltransferase 6 homolog (S. cerevisiae) protein-coding 0.098958 0.637306 -16(TCGCCGTGCTCC,+,0.00) -58(GGGCCCGGCTGC,+,0.00) 9(CCTCCTCCTCGG,+,0.00) 2(TCCCGCCCCT,+,0.00) -96(CGTCGCGG,+,0.00) 561_WT_peak_4485 chr2 228189800 228190100 + 87 NA promoter-TSS (NM_001277061) promoter-TSS (NM_001277061) -70 NR_102371 654841 Hs.659982 NR_102371 ENSG00000236432 LOC654841 - uncharacterized LOC654841 ncRNA 0.103333 0.654485 -53(CGCGTCCG,+,0.00) -9(GCTACGGCTCCC,-,0.00) 50(GGGCCGCTCC,+,0.00) 8(GGGCCAGCCCGC,-,0.00) 561_WT_peak_4989 chr3 4892075 4892266 + 87 NA Intergenic Intergenic -47740 NR_037903 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA 0.015707 0.364583 561_WT_peak_1656 chr12 40014986 40015161 + 87 NA Intergenic AluSz6|SINE|Alu -1230 NM_005164 225 Hs.117852 NM_005164 ABCD2 ABC39|ALDL1|ALDR|ALDRP|hALDR ATP-binding cassette, sub-family D (ALD), member 2 protein-coding 0.028571 0.556818 -69(GGGTTTTG,-,0.00) -11(CCTTAGCCTCCC,-,0.00) -136(CCGAGTAG,-,0.00) 561_WT_peak_1299 chr11 59436995 59437202 + 87 NA promoter-TSS (NM_152716) promoter-TSS (NM_152716) -587 NM_152716 219988 Hs.591960 NM_152716 HPRD:08214 PATL1 Pat1b|hPat1b protein associated with topoisomerase II homolog 1 (yeast) protein-coding 0.067633 0.543269 -127(ATGTGGCT,+,0.00) 31(CGCTGGCCACGC,-,0.00) -4(GCTGCAGAGC,+,0.00) 561_WT_peak_2423 chr15 35280624 35280955 + 87 NA promoter-TSS (NM_014106) promoter-TSS (NM_014106) -292 NM_014106 54989 Hs.744990 NM_014106 HPRD:16918 ZNF770 PRO1914 zinc finger protein 770 protein-coding 0.048338 0.548193 -2(AGCCGATT,-,0.00) -5(CAAAGCCG,+,0.00) -105(CGGGTACA,+,0.00) 561_WT_peak_2024 chr13 45151405 45151844 + 87 NA promoter-TSS (NM_001243799) promoter-TSS (NM_001243799) -923 NM_183422 8848 Hs.436383 NM_006022 TSC22D1 Ptg-2|TGFB1I4|TSC22 TSC22 domain family, member 1 protein-coding 0.111617 0.720455 -78(GGAGGAGGAGGG,-,0.00),-17(GGAGGAGGAGGA,-,0.00),-14(GGAGGAGGAGGG,-,0.00) 69(GTCTTCGGGCCT,-,0.00),194(GAATCCGGGTCG,-,0.00) 51(CGGGGCAGGAGG,-,0.00) 21(TCGGCGCC,+,0.00),127(GGCGCCGA,-,0.00) 85(GAGCGCCAGGTC,+,0.00),242(GCGCGCCTGCCG,+,0.00) 99(CCGACGGA,+,0.00),180(CCGGCCGA,+,0.00) -103(AGGGGAGGGA,-,0.00) -145(CCCCCGGC,-,0.00) 201(GGTCGGAC,+,0.00) -154(TCTTCGGCTCCC,-,0.00),147(TGGAGCCGGAGG,+,0.00) 561_WT_peak_1250 chr11 35061816 35062059 + 87 NA Intergenic Intergenic 97642 NR_120528 100507144 Hs.673491 NR_120528 ENSG00000255521 LOC100507144 - uncharacterized LOC100507144 ncRNA 0.008230 0.463115 -162(CCGACCTA,+,0.00),-158(CCTACCGA,+,0.00) 561_WT_peak_1687 chr12 49628349 49628592 + 87 NA Intergenic CpG -30395 NM_032704 84790 Hs.652390 NM_032704 HPRD:06747 TUBA1C TUBA6|bcm948 tubulin, alpha 1c protein-coding 0.102881 0.639344 -22(AGCGGCCT,-,0.00) -47(CCCCCGCC,-,0.00) -86(CGCCACGA,-,0.00) -121(CGGCGCTA,+,0.00) -65(CGCGGCCCGGCG,-,0.00) -87(CCGCCACG,-,0.00),-44(CCGCCACG,-,0.00) -45(CCCGCCACGCCC,+,0.00) 561_WT_peak_6874 chr7 141250960 141251198 + 87 NA promoter-TSS (NM_018238) promoter-TSS (NM_018238) 1 NM_018238 55750 Hs.743318 NM_018238 AGK CATC5|CTRCT38|MTDPS10|MULK acylglycerol kinase protein-coding 0.105042 0.669456 -48(GCATCCGAGCCG,-,0.00) -41(AGCCGGTT,-,0.00) -29(CCCCCGGC,-,0.00),6(CCCGCGGC,-,0.00) -25(CGGCCCGA,-,0.00) -4(CGCTCGCAGCCC,+,0.00) 25(GCGGCGGCAGCG,+,0.00) 0(CGCAGCCCCGCG,-,0.00) 4(GCCCCGCGGC,-,0.00) 561_WT_peak_1817 chr12 96878936 96879134 + 87 NA Intergenic Intergenic -84669 NM_001170464 5128 Hs.506415 NM_002595 HPRD:09141 CDK17 PCTAIRE2|PCTK2 cyclin-dependent kinase 17 protein-coding 0.010101 0.447236 -123(CAAAACCA,+,0.00),-115(CAAAACCT,+,0.00),-84(CAAAACCA,+,0.00) 561_WT_peak_4149 chr2 74433499 74433804 + 87 NA intron (NM_006636, intron 2 of 7) intron (NM_006636, intron 2 of 7) 7961 NM_006636 10797 Hs.469030 NM_006636 MTHFD2 NMDMC methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase protein-coding 0.013115 0.516340 561_WT_peak_1675 chr12 48499630 48499926 + 87 NA promoter-TSS (NR_051992) promoter-TSS (NR_051992) -3 NR_051992 29843 Hs.371957 NM_014554 HPRD:07153 SENP1 SuPr-2 SUMO1/sentrin specific peptidase 1 protein-coding 0.097973 0.717172 17(CGAACCGGAACC,+,0.00),87(CGAACCGGAACC,+,0.00) 25(AACCGGCT,+,0.00),125(AGGTGGCT,+,0.00) 53(GCCGGGCG,+,0.00) 118(AGTCGCTA,+,0.00) -53(GTCCGACA,-,0.00) 68(CAAAACCC,+,0.00) -110(CGCCGGCCCCAC,-,0.00) -70(CCGGGCCGGCTG,+,0.00) 561_WT_peak_3254 chr17 54911538 54911786 + 87 NA promoter-TSS (NM_001085430) promoter-TSS (NM_001085430) 202 NM_003647 8526 Hs.239514 NM_003647 HPRD:03259 DGKE DAGK5|DAGK6|DGK|NPHS7 diacylglycerol kinase, epsilon 64kDa protein-coding 0.149194 0.787149 -111(TGGCCCGGAGCC,+,0.00),-21(GTCGCCGGGCCG,-,0.00) -158(GGCGGCCCAG,+,0.00),-127(GGCGGCCAAG,+,0.00) -76(GGCTTCGA,-,0.00),65(GGCGCCGA,-,0.00) 69(CCGACCGG,+,0.00) 51(GGCCGACG,-,0.00) -102(GCCGCGCC,+,0.00),-63(GGCGCGGC,-,0.00) -108(CCCGGAGCCGCG,+,0.00),-19(CGCCGGGCCGCG,+,0.00) -130(CGAGGCGG,+,0.00) -126(GCGGCCAAGGCC,+,0.00) 561_WT_peak_2291 chr14 75517706 75518119 + 87 NA intron (NM_001040108, intron 1 of 12) CpG 323 NM_001040108 27030 Hs.436650 NM_014381 HPRD:05094 MLH3 HNPCC7 mutL homolog 3 protein-coding 0.089588 0.661836 -5(GAGTCCGGGGCA,-,0.00),86(GCCGCCGGGCCT,-,0.00),94(GCCTCCGGGGCC,-,0.00),111(GCATCCGGCTCC,-,0.00) 74(CCCGGCCGCC,-,0.00) 10(CTGCCTTCCCGC,+,0.00) 22(CAGGCCCAGCCC,+,0.00) 72(CGCCCGGC,-,0.00) -28(GGCCTGGGAGGG,-,0.00) -139(CGGGTAAA,+,0.00) -10(GGGCCGAGTC,+,0.00),63(AACTGGGCCC,-,0.00) 17(CCCGCCAGGCCC,+,0.00),78(GCCGCCAGGCCG,+,0.00) -82(GCCTCCCAGC,-,0.00) -30(GGGGCCTGGGAG,+,0.00),71(CCGCCCGGCCGC,-,0.00),79(CCGCCAGGCCGC,-,0.00) 561_WT_peak_2130 chr14 23235540 23235924 + 87 NA promoter-TSS (NM_005015) promoter-TSS (NM_005015) 1 NM_005015 5018 Hs.151134 NM_005015 HPRD:03043 OXA1L OXA1 oxidase (cytochrome c) assembly 1-like protein-coding 0.044271 0.472727 50(TTTACCCA,-,0.00),199(CGGGCAAA,+,0.00) 169(ACTGCGCA,+,0.00) 70(CCGCCAAG,-,0.00) 561_WT_peak_4992 chr3 5019925 5020501 + 87 NA promoter-TSS (NM_003670) promoter-TSS (NM_003670) -884 NM_003670 8553 Hs.744856 NM_003670 HPRD:16050 BHLHE40 BHLHB2|DEC1|HLHB2|SHARP-2|STRA13|Stra14 basic helix-loop-helix family, member e40 protein-coding 0.100694 0.738302 89(CCGGGAGGAAGG,-,0.00),142(CCGCCCGCCCGC,+,0.00) -163(GGGCTGGCACGC,-,0.00),-45(GGGCAGGCGCCG,-,0.00) 91(GGGAGGAAGGGG,+,0.00) 267(CGTCGGCC,+,0.00) -27(CGGTTGTG,-,0.00) 192(CCCTCGGCTCAC,-,0.00) 125(GCTGCGCA,+,0.00) -44(GGCAGGCGCCGC,-,0.00),-38(CGCCGCCGCCGC,-,0.00) 316(CCCCAAGGCGGG,-,0.00) -39(GCGCCGCCGC,-,0.00),402(GCTGGGGGGC,+,0.00) 561_WT_peak_6607 chr7 21395046 21395371 + 87 NA Intergenic Intergenic -72481 NM_003112 6671 Hs.88013 NM_003112 HPRD:02764 SP4 HF1B|SPR-1 Sp4 transcription factor protein-coding 0.006154 0.429448 561_WT_peak_5585 chr4 119512991 119513276 + 87 NA intron (NR_109983, intron 1 of 9) AluJr|SINE|Alu 234 NR_109983 729218 Hs.448518 NR_103825 LOC729218 - uncharacterized LOC729218 pseudo 0.031579 0.548951 -148(AGCGACCT,-,0.00) -40(CGCGTTCG,+,0.00) -34(CGAGGCGG,+,0.00) 40(GCCCCCCAGC,-,0.00) 561_WT_peak_5646 chr4 185455822 185456032 + 87 NA Intergenic Intergenic -60201 NM_002199 3660 Hs.654566 NM_002199 HPRD:00962 IRF2 IRF-2 interferon regulatory factor 2 protein-coding 0.004762 0.350711 -156(CAAAACAG,+,0.00) -38(GAAACAGAAAGA,+,0.00) 561_WT_peak_976 chr10 43616356 43616621 + 87 NA intron (NM_020630, intron 15 of 18) intron (NM_020630, intron 15 of 18) -17405 NM_018590 55454 Hs.657569 NM_018590 HPRD:11348 CSGALNACT2 CHGN2|GALNACT-2|GALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 protein-coding 0.007547 0.526316 561_WT_peak_134-2 chr1 27986152 27986182 + 87 NA Intergenic MIR3|SINE|MIR 12557 NM_022872 2537 Hs.523847 NM_002038 HPRD:00959 IFI6 6-16|FAM14C|G1P3|IFI-6-16|IFI616 interferon, alpha-inducible protein 6 protein-coding 0.033333 0.580645 561_WT_peak_6251-2 chr6 29691777 29691793 + 87 NA intron (NM_018950, intron 2 of 6).5 CpG-21889 668 NM_001098478 3134 Hs.519972 NM_018950 HPRD:00884 HLA-F CDA12|HLA-5.4|HLA-CDA12|HLAF major histocompatibility complex, class I, F protein-coding 0.125000 0.529412 561_WT_peak_3277 chr17 57863617 57864112 + 87 NA intron (NM_030938, intron 7 of 11) intron (NM_030938, intron 7 of 11) -54763 NR_029493 406991 Hs.444569 NR_029493 miRBase:MI0000077 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA 0.006061 0.409274 561_WT_peak_5295 chr3 155572218 155572848 + 87 NA promoter-TSS (NM_004733) promoter-TSS (NM_004733) -285 NM_001190992 9197 Hs.478031 NM_004733 HPRD:04734 SLC33A1 ACATN|AT-1|AT1|CCHLND|SPG42 solute carrier family 33 (acetyl-CoA transporter), member 1 protein-coding 0.061905 0.570523 94(GGGCACGA,-,0.00) 308(GAATCAGGAGGC,+,0.00) 29(GCCGCCCA,+,0.00) 26(GGCGCCGCCC,-,0.00) -115(CCTTCCCAGC,-,0.00) 561_WT_peak_2370 chr14 102285961 102286340 + 86 NA intron (NM_001161725, intron 3 of 15) AluJb|SINE|Alu 10010 NM_178587 5527 Hs.368264 NM_002719 HPRD:03385 PPP2R5C B56G|PR61G protein phosphatase 2, regulatory subunit B', gamma protein-coding 0.031662 0.539474 176(AAGCCGTT,+,0.00) 561_WT_peak_1962 chr13 26380869 26381145 + 86 NA intron (NM_016529, intron 27 of 36) L1M4|LINE|L1 244191 NM_001007538 387914 Hs.433791 NM_001007538 HPRD:16589 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding 0.003623 0.364621 -130(AAGTGGCT,+,0.00),64(AGCCGTTT,-,0.00) 3(TGGTTTTG,-,0.00) -89(GGTTCCAGTTTC,-,0.00) 561_WT_peak_7531 chrX 47004845 47005068 + 86 NA promoter-TSS (NM_019056) promoter-TSS (NM_019056) 339 NM_001204467 8241 Hs.401509 NM_005676 HPRD:02095 RBM10 DXS8237E|GPATC9|GPATCH9|S1-1|TARPS|ZRANB5 RNA binding motif protein 10 protein-coding 0.085202 0.580357 -51(GACTTCGGGTCG,-,0.00) -121(AGCGTCGA,-,0.00),-117(TCGACGCT,+,0.00) -135(GGGCCGAGAAGG,-,0.00) -32(TGCGCGGA,-,0.00) -56(GGGCGGACTT,+,0.00) -132(CCGAGAAG,-,0.00) 561_WT_peak_389 chr1 113217298 113217458 + 86 NA intron (NM_001286072, intron 1 of 21) intron (NM_001286072, intron 1 of 21) 283 NM_001130079 4343 Hs.514941 NM_020963 HPRD:14732 MOV10 fSAP113|gb110 Mov10 RISC complex RNA helicase protein-coding 0.037500 0.596273 561_WT_peak_1489 chr11 116643551 116643903 + 86 NA promoter-TSS (NM_001159736) promoter-TSS (NM_001159736) -13 NM_001159736 84811 Hs.437341 NM_032725 HPRD:11307 BUD13 Cwc26|fSAP71 BUD13 homolog (S. cerevisiae) protein-coding 0.127841 0.696884 -108(TCGACGCC,+,0.00),172(ACGACGCC,+,0.00) 44(AGGGCGGGGC,-,0.00) -28(GGCGGGGG,+,0.00) 60(CGGAAGTGGCGG,+,0.00) -141(TTGCGACG,-,0.00) -27(GCGGGGGCAGAG,+,0.00),47(GCGGGGCCACGG,+,0.00) -151(CGGCCGCTTT,+,0.00) -42(GCCGCCATGGCA,+,0.00),-40(CGCCATGGCAGC,-,0.00),51(GGCCACGGCCGG,-,0.00) -53(GCGGCGGAGC,+,0.00),156(GCTCCACAGC,-,0.00) 561_WT_peak_404 chr1 117112965 117113382 + 86 NA intron (NM_001144822, intron 1 of 4) CpG 542 NR_026665 965 Hs.34341 NM_001779 HPRD:01081 CD58 LFA-3|LFA3|ag3 CD58 molecule protein-coding 0.098321 0.667464 149(CGGGCCGGAGCC,+,0.00) -164(AGGCCGCT,+,0.00) -36(GGCGTCGC,-,0.00) 115(GGCGGGGG,+,0.00) 55(CAGCGACG,-,0.00) -84(CGGCGGAC,+,0.00) 125(CGCAGGCCCCGC,-,0.00) 561_WT_peak_6789 chr7 102311878 102312141 + 86 NA exon (NM_032959, exon 1 of 9) exon (NM_032959, exon 1 of 9) 167 NM_032959 246721 Hs.610255 NM_032958 HPRD:17878 POLR2J2 HRPB11B|RPB11b1 polymerase (RNA) II (DNA directed) polypeptide J2 protein-coding 0.095057 0.651515 70(AGAGGCCT,-,0.00),72(AGGCCTCT,+,0.00) -81(CCCGCGCA,+,0.00) -66(CCTCCGCAGC,-,0.00) 561_WT_peak_7591 chrX 100645872 100646143 + 86 NA promoter-TSS (NM_001287344) promoter-TSS (NM_001287344) 129 NM_001199972 6173 Hs.432485 NM_021029 HPRD:06709 RPL36A L36A|L44L|MIG6|RPL44 ribosomal protein L36a protein-coding 0.081181 0.580882 -151(CTCAGCCGCC,-,0.00),14(GGGGGCCGAG,+,0.00) 52(TCGTCGCC,+,0.00) -146(CCGCCCGA,+,0.00),-103(CCTACCGA,+,0.00) -155(TCCTCTCAGCCG,+,0.00) 49(CCTTCGTCGCCC,-,0.00) 16(GGGCCGAGTA,+,0.00) 561_WT_peak_1045 chr10 74114451 74114833 + 86 NA exon (NM_017626, exon 1 of 9) exon (NM_017626, exon 1 of 9) 265 NM_001002762 54788 Hs.500013 NM_017626 HPRD:07086 DNAJB12 DJ10 DnaJ (Hsp40) homolog, subfamily B, member 12 protein-coding 0.102094 0.650131 143(CCACCCTCCGCC,+,0.00) -81(GGCGTCGG,-,0.00) -159(TCGGTCCG,-,0.00),-37(CCGGTCGG,-,0.00) 75(GCCGGGCG,+,0.00),121(GCCGGGCG,+,0.00) -161(CGTCGGTC,+,0.00),-79(CGTCGGAT,+,0.00) 75(GCCGGGCGAGCG,+,0.00) 110(CGTCGCGG,+,0.00) 561_WT_peak_1375 chr11 65819838 65820058 + 86 NA exon (NM_006842, exon 1 of 22) exon (NM_006842, exon 1 of 22) 132 NM_006842 10992 Hs.406423 NM_006842 HPRD:10410 SF3B2 Cus1|SAP145|SF3B145|SF3b1|SF3b150 splicing factor 3b, subunit 2, 145kDa protein-coding 0.072727 0.656109 -145(TGGCGACG,-,0.00) 43(GTTACCCG,-,0.00) 561_WT_peak_7494 chrX 2382102 2382388 + 86 NA intron (NM_145177, intron 1 of 6) intron (NM_145177, intron 1 of 6) 36335 NM_001171135 9189 Hs.131452 NM_004729 HPRD:02170 ZBED1 ALTE|DREF|TRAMP|hDREF zinc finger, BED-type containing 1 protein-coding 0.048951 0.547038 -36(ATGTGGCT,+,0.00) -118(CGTGGCTA,+,0.00) -103(GCCGCCATGTAC,+,0.00) 561_WT_peak_7548 chrX 51486421 51486785 + 86 NA 5' UTR (NM_018094, exon 1 of 1) 5' UTR (NM_018094, exon 1 of 1) 122 NM_018094 23708 Hs.59523 NM_018094 HPRD:02334 GSPT2 ERF3B|GST2 G1 to S phase transition 2 protein-coding 0.079670 0.641096 -108(AAGTGGTT,+,0.00),-54(AGCCGCCA,-,0.00) -145(TCCACGCC,+,0.00),165(TCGGCGCC,+,0.00) -131(TGGGTCGG,-,0.00) -141(CGCCCGGC,-,0.00) 24(TCGTGTCG,+,0.00) 27(TGTCGCTA,+,0.00) 161(CGACTCGG,+,0.00) 561_WT_peak_1103 chr10 96122724 96123014 + 86 NA promoter-TSS (NM_022451) promoter-TSS (NM_022451) -186 NM_022451 64318 Hs.74899 NM_022451 HPRD:12562 NOC3L AD24|C10orf117|FAD24 nucleolar complex associated 3 homolog (S. cerevisiae) protein-coding 0.100000 0.618557 89(TCGGGCTCCTCC,+,0.00) -78(TGGACCGGTTGC,+,0.00) -158(CTCCGCCGCC,-,0.00) -7(GCGGGAAGCCGG,-,0.00),1(CCGGGCGGGAGG,-,0.00) -23(GGCGTCGG,-,0.00) -115(GGGCTCGCGCCC,-,0.00) -59(CGTGCGCG,-,0.00) -66(CCCCCGGC,-,0.00),0(GCCGGGCG,+,0.00) -44(TGGCACGA,-,0.00) 561_WT_peak_446 chr1 145575036 145575141 + 86 NA promoter-TSS (NM_006099) promoter-TSS (NM_006099) -900 NM_006099 10401 Hs.435761 NM_006099 HPRD:09068 PIAS3 ZMIZ5 protein inhibitor of activated STAT, 3 protein-coding 0.047619 0.518868 -164(CGTAAGCG,-,0.00) 561_WT_peak_7577 chrX 71320845 71321027 + 86 NA intron (NM_001013627, intron 1 of 7) intron (NM_001013627, intron 1 of 7) 30815 NM_001024455 340526 Hs.512180 NM_001024455 HPRD:18594 RGAG4 6430402L03Rik|MAR5|MART5 retrotransposon gag domain containing 4 protein-coding 0.010989 0.475410 -141(CAAAACCC,+,0.00) 561_WT_peak_3747 chr19 37708827 37709111 + 86 NA Intergenic CpG -7518 NM_152279 92285 Hs.390568 NM_152279 HPRD:18354 ZNF585B SZFP41 zinc finger protein 585B protein-coding 0.070423 0.621053 -93(GTCCTACG,-,0.00) 38(GGCGCGGT,-,0.00) -104(GCAGGGCCAGCG,+,0.00) -56(CACGGAGACGCG,+,0.00) 32(CTTCTCGG,+,0.00) 561_WT_peak_7206 chr9 6068960 6069229 + 86 NA Intergenic Intergenic -53454 NM_012416 26953 Hs.167496 NM_012416 HPRD:17953 RANBP6 - RAN binding protein 6 protein-coding 0.000000 0.362963 561_WT_peak_5560 chr4 100484675 100484977 + 86 NA promoter-TSS (NM_152292) promoter-TSS (NM_152292) -1 NM_152292 93587 Hs.380412 NM_152292 HPRD:15241 TRMT10A HEL-S-88|RG9MTD2|TRM10 tRNA methyltransferase 10 homolog A (S. cerevisiae) protein-coding 0.066225 0.590759 97(AACCACTT,-,0.00) 62(TCGACGTC,+,0.00) -83(CCGACGGA,+,0.00) 42(GCCGCGGG,+,0.00) 20(GAACCAGGGAGC,+,0.00) -59(GGCGGAGCCTCG,+,0.00) -76(AAAGCGCCCC,-,0.00),-60(GGGCGGAGCC,+,0.00) 561_WT_peak_1939 chr13 20437009 20437242 + 86 NA intron (NM_001039650, intron 1 of 5) CpG 651 NM_001142684 9205 Hs.530988 NM_014242 ENSG00000132950 ZMYM5 HSPC050|MYM|ZNF198L1|ZNF237 zinc finger, MYM-type 5 protein-coding 0.081545 0.662393 -131(TCGACGAC,+,0.00) -71(GCCGCGCA,+,0.00) -71(GCCGCGCAGC,-,0.00) 561_WT_peak_2623 chr15 93590944 93591124 + 86 NA intron (NM_001166286, intron 2 of 2) intron (NM_001166286, intron 2 of 2) 25355 NM_001166286 56963 Hs.271277 NM_020211 HPRD:09560 RGMA RGM repulsive guidance molecule family member a protein-coding 0.038889 0.607735 561_WT_peak_916 chr10 23657828 23658011 + 86 NA Intergenic Intergenic -24147 NM_153714 256815 Hs.522360 NM_153714 HPRD:12585 C10orf67 - chromosome 10 open reading frame 67 protein-coding 0.010929 0.391304 -62(CAAAACCA,+,0.00),-8(CAAAACAG,+,0.00) 561_WT_peak_5758 chr5 55346857 55347055 + 86 NA Intergenic Intergenic 55961 NR_102755 441072 Hs.482141 NR_102755 ENSG00000227908 FLJ31104 - uncharacterized LOC441072 ncRNA 0.000000 0.316583 561_WT_peak_2903 chr16 74401958 74402222 + 86 NA promoter-TSS (NR_026950) promoter-TSS (NR_026950) 63 NR_026950 283922 Hs.558726 NR_026950 ENSG00000214331 LOC283922 - pyruvate dehydrogenase phosphatase regulatory subunit pseudogene pseudo 0.155303 0.747170 -76(CGGGCCGGAAAG,+,0.00) -80(GCCGCGGG,+,0.00) 56(GCCGCGCC,+,0.00) 84(CGCGGAGCCCCG,+,0.00) 89(AGCCCCGCCC,-,0.00) -39(GGGGCGAAGC,+,0.00) 561_WT_peak_6575 chr7 3340379 3340699 + 86 NA promoter-TSS (NM_152744) promoter-TSS (NM_152744) -541 NM_152744 221935 Hs.653013 NM_152744 HPRD:07388 SDK1 - sidekick cell adhesion molecule 1 protein-coding 0.137500 0.757009 -30(CTCGGGCGCC,-,0.00) 51(TCGACGCC,+,0.00) -77(GGGCTGCCGCAC,-,0.00) 109(CCGCCCGA,+,0.00) -120(GCCGGGCG,+,0.00),-6(GCCGGGCG,+,0.00),13(CCCCCGCC,-,0.00) -71(CCGCACGA,-,0.00),41(GCGTGCCG,+,0.00),132(CGGCACAA,-,0.00) -11(GCGGGGCCGGGC,+,0.00),90(GCGCAGCCGGCG,+,0.00) 105(GAAGCCGCCC,-,0.00) 28(CCGCCACG,-,0.00) -14(GCTGCGGGGC,+,0.00) 561_WT_peak_5944 chr5 137910766 137911009 + 86 NA intron (NM_004134, intron 1 of 16) CpG 431 NM_004134 3313 Hs.184233 NM_004134 HPRD:02770 HSPA9 CSA|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74 heat shock 70kDa protein 9 (mortalin) protein-coding 0.090535 0.672131 -162(TGACCCGGCAGC,+,0.00) 20(CCCGGGAGGCTG,-,0.00) -163(TTGACCCG,-,0.00) -80(GCGCGGCCTGCC,+,0.00) -68(GCAGCGAAGC,+,0.00),28(GCTGCGGCGC,+,0.00) -78(GCGGCCTGCCGC,+,0.00) 561_WT_peak_1839 chr12 107485865 107486094 + 86 NA intron (NM_004075, intron 1 of 12) intron (NM_004075, intron 1 of 12) 1656 NM_004075 1407 Hs.151573 NM_004075 HPRD:09050 CRY1 PHLL1 cryptochrome circadian clock 1 protein-coding 0.008734 0.421739 561_WT_peak_7559 chrX 56590110 56590471 + 86 NA 5' UTR (NM_013444, exon 1 of 1) 5' UTR (NM_013444, exon 1 of 1) 264 NM_013444 29978 Hs.179309 NM_013444 HPRD:02224 UBQLN2 ALS15|CHAP1|DSK2|N4BP4|PLIC2 ubiquilin 2 protein-coding 0.102493 0.690608 23(CGCGGCCGCC,-,0.00) -163(AGCGGCCT,-,0.00) -90(CCGCGCTCCCCG,+,0.00),-3(GCGCCTTCCCTG,+,0.00) 3(TCCCTGCCCG,+,0.00) 73(CCCGCGGC,-,0.00) -5(CCGCGCCTTCCC,-,0.00) -75(GACCCGGCCC,-,0.00) 27(GCCGCCATGGCT,+,0.00),29(CGCCATGGCTGA,-,0.00) 76(GCGGCCCTGCTG,+,0.00) 561_WT_peak_3430 chr18 9118586 9118772 + 86 NA intron (NM_021074, intron 2 of 7) intron (NM_021074, intron 2 of 7) 16051 NM_021074 4729 Hs.464572 NM_021074 HPRD:02757 NDUFV2 CI-24k NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa protein-coding 0.010753 0.363636 561_WT_peak_7523 chrX 40594687 40595160 + 86 NA promoter-TSS (NM_004229) promoter-TSS (NM_004229) -119 NM_004229 9282 Hs.407604 NM_004229 HPRD:02172 MED14 CRSP150|CRSP2|CSRP|CXorf4|DRIP150|EXLM1|RGR1|TRAP170 mediator complex subunit 14 protein-coding 0.122622 0.706751 21(GGGGGGAGGCGG,-,0.00) -45(CCGACCGC,+,0.00),146(TCGATCGG,-,0.00) 18(GGCGGGGG,+,0.00) -11(GTCCGCCG,-,0.00) -63(AGAACAGGAAGC,+,0.00) -118(ACCGCGCC,+,0.00) 49(GGGCGGCCCCGC,-,0.00) 135(CGAGGCGG,+,0.00) 219(GCACCGCAGC,-,0.00),229(GCTGGGGGGC,+,0.00) -78(CCGCCGGGCCGC,-,0.00) 561_WT_peak_7627 chrX 153513386 153513617 + 86 NA intron (NM_001586, intron 3 of 4) AluJb|SINE|Alu 9953 NM_001586 1527 Hs.672606 NM_001586 HPRD:02103 TEX28 CXorf2|MRX99|TEX28P1|TEX28P2|fTEX testis expressed 28 protein-coding 0.030303 0.508621 28(GATACCGGGTCT,-,0.00) -47(CCCGCTCAGCCT,+,0.00) 561_WT_peak_2982 chr17 2497276 2497671 + 86 NA intron (NM_000430, intron 1 of 10) CpG 550 NM_000430 5048 Hs.77318 NM_000430 HPRD:03329 PAFAH1B1 LIS1|LIS2|MDCR|MDS|PAFAH platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) protein-coding 0.106329 0.724747 68(GGAGGAGGGGGA,-,0.00),184(TCGCCCTCCTCC,+,0.00) -74(GGACCCGGCGGC,+,0.00),62(AGACCCGGAGGA,+,0.00) -10(CTCCGCCGCC,-,0.00),36(GGCGGCCGCG,+,0.00) -56(ATGTGGCT,+,0.00) -142(CCGGTAAGGCGG,-,0.00),84(CCGGGGAGGGCG,-,0.00),85(CGGGGAGGGCGC,-,0.00) 153(CCCCCGCC,-,0.00),160(CCCGCGGC,-,0.00) 107(CCTCTCCTCCCG,-,0.00) 123(CGGCTTTG,-,0.00) -98(ACCGCGCC,+,0.00) 115(CCCGGGCCCGGC,-,0.00),153(CCCCCGCCCCGC,-,0.00) -130(CGCGGGTCTGCG,-,0.00) 41(CCGCGACG,-,0.00) -94(CGCCCGGGCGGC,-,0.00) 158(GCCCCGCGGC,-,0.00) 561_WT_peak_6856 chr7 135242600 135243030 + 86 NA intron (NM_015135, intron 1 of 42) intron (NM_015135, intron 1 of 42) 153 NM_015135 23165 Hs.743250 NM_015135 HPRD:17653 NUP205 C7orf14 nucleoporin 205kDa protein-coding 0.051163 0.589327 -68(GCGACGCC,+,0.00) 135(CGGCTCCAGCCC,+,0.00) -70(TGGCGACG,-,0.00) 208(CTCTCACAGCCC,+,0.00),235(CCCCCTCACCCC,+,0.00) -46(CGGGTAAG,+,0.00) 561_WT_peak_7418 chr9 126085139 126085361 + 86 NA Intergenic Intergenic -33196 NM_173689 286204 Hs.568340 NM_173689 HPRD:13093 CRB2 - crumbs family member 2 protein-coding 0.009009 0.573991 561_WT_peak_524 chr1 151584481 151584815 + 86 NA promoter-TSS (NM_030918) promoter-TSS (NM_030918) -14 NM_030918 81609 Hs.192326 NM_030918 HPRD:11591 SNX27 MRT1|MY014 sorting nexin family member 27 protein-coding 0.149701 0.767164 -101(GGTGGCCGAG,+,0.00),35(GGCGGACGAG,+,0.00) 124(CCGGGAACGGCG,-,0.00),137(CGGGGGAGGCGG,-,0.00) -86(CCCGCGGC,-,0.00),4(GGCGGGGG,+,0.00),99(GGCGGGGG,+,0.00),135(GGCGGGGG,+,0.00) -85(CCGCGGCCGGCG,+,0.00),91(GCGGCGGCGGCG,+,0.00) -96(CCGAGTCG,-,0.00),-95(CGAGTCGG,+,0.00) -44(GCTGCCAGGC,+,0.00) 561_WT_peak_1394 chr11 67981007 67981388 + 86 NA promoter-TSS (NM_016028) promoter-TSS (NM_016028) 42 NM_001300908 51111 Hs.632120 NM_016028 HPRD:11616 SUV420H1 CGI85|KMT5B suppressor of variegation 4-20 homolog 1 (Drosophila) protein-coding 0.170604 0.777487 -143(GCCTCCGGTTCC,-,0.00) -63(AGCCGCCT,-,0.00) -78(TCGCCGCC,+,0.00),-11(GGCCTCGA,-,0.00),-7(TCGACGGC,+,0.00) 122(GCCGGGCG,+,0.00) 182(TCGTGGCG,+,0.00) -142(CCTCCGGTTCCC,-,0.00),169(CCGTCGCCTCCC,-,0.00) -77(CGCCGCCCCCGG,-,0.00) -152(CGCGGTGCCGCC,+,0.00) -54(GACCCCGCCC,-,0.00) -83(CCGCGTCG,-,0.00),183(CGTGGCGG,+,0.00) 45(CCCGCCAGGCCC,+,0.00) -112(GCCCCGCTGC,-,0.00),-81(GCGTCGCCGC,-,0.00),14(GCGGCGCAGC,+,0.00),14(GCGGCGCAGC,-,0.00) 561_WT_peak_6069 chr6 209812 210004 + 86 NA Intergenic Intergenic -61749 NR_109817 441123 NR_109817 ENSG00000170590 LINC00266-3 C6orf88|NCRNA00266-3|NCRNA00266C|dJ24O22.2 long intergenic non-protein coding RNA 266-3 ncRNA 0.026042 0.424870 561_WT_peak_7631 chrX 153665427 153665652 + 86 NA TTS (NM_001183) TTS (NM_001183) 280 NM_001493 2664 Hs.74576 NM_001493 HPRD:02114 GDI1 1A|GDIL|MRX41|MRX48|OPHN2|RABGD1A|RABGDIA|XAP-4 GDP dissociation inhibitor 1 protein-coding 0.146667 0.716814 -33(GGAGGAGGAGGA,-,0.00) -54(GGCGGCGA,-,0.00) 32(TCGTGCTG,+,0.00) -150(GGGAAGAGGCGG,+,0.00) -106(GGCCGACG,-,0.00) -159(GCGGGGCGCGGG,+,0.00),-71(GCGGCGGCGGCG,+,0.00),-11(CGCTGGCACCGA,-,0.00) -162(GCGGCGGGGC,+,0.00) 561_WT_peak_584 chr1 161123819 161124008 + 86 NA intron (NM_016406, intron 1 of 5) intron (NM_016406, intron 1 of 5) 379 NM_016406 51506 Hs.301412 NM_016406 HPRD:15643 UFC1 HSPC155 ubiquitin-fold modifier conjugating enzyme 1 protein-coding 0.063492 0.521053 8(AAGCCGCT,+,0.00),9(AGCCGCTT,-,0.00) -139(CGCCGGAC,+,0.00) 18(CGGTTTTT,-,0.00) 13(GCTTCCGGTTTT,-,0.00) 561_WT_peak_3441 chr18 12990920 12991101 + 86 NA promoter-TSS (NM_032142) promoter-TSS (NM_032142) -351 NM_032142 55125 Hs.100914 NM_018069 HPRD:10855 CEP192 PPP1R62 centrosomal protein 192kDa protein-coding 0.060773 0.543956 -106(GGCGGGGG,+,0.00) -6(GCGGCGCCAACG,+,0.00) 561_WT_peak_7507 chrX 15808539 15808907 + 86 NA intron (NM_005089, intron 1 of 10) CpG 149 NM_005089 8233 Hs.171909 NM_005089 HPRD:02068 ZRSR2 U2AF1-RS2|U2AF1L2|U2AF1RS2|URP zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 protein-coding 0.084239 0.647696 -35(CGTACGGG,-,0.00) -91(CGGCAAGA,-,0.00) 85(TGCGCGCT,-,0.00) -163(CGCGCCTGCGCG,-,0.00) -74(CCGAGAAG,-,0.00) 561_WT_peak_3513 chr18 56791146 56791377 + 86 NA Intergenic Intergenic -15864 NM_033280 90701 Hs.45107 NM_033280 HPRD:15310 SEC11C SEC11L3|SPC21|SPCS4C SEC11 homolog C (S. cerevisiae) protein-coding 0.000000 0.431034 561_WT_peak_5273 chr3 140660316 140660636 + 85 NA promoter-TSS (NM_018155) promoter-TSS (NM_018155) -186 NM_018155 55186 Hs.144130 NM_018155 HPRD:07688 SLC25A36 PNC2 solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 protein-coding 0.078125 0.582555 -148(ATCCGCTT,-,0.00) 84(CGTCACGA,-,0.00) -118(TTTTCCCG,-,0.00) 17(GCCTCGCGGC,-,0.00) 561_WT_peak_1001 chr10 61666207 61666517 + 85 NA promoter-TSS (NM_005436) promoter-TSS (NM_005436) 52 NM_005436 8030 Hs.591360 NM_005436 HPRD:09064 CCDC6 D10S170|H4|PTC|TPC|TST1 coiled-coil domain containing 6 protein-coding 0.106452 0.733119 76(CTAGGCCGCC,-,0.00) -145(GGCGGCGA,-,0.00),-142(GGCGACGA,-,0.00),-49(GGCGGCGA,-,0.00) -110(GCCGGGCG,+,0.00) 80(GCCGCCCA,+,0.00) -57(CTCGGAGCGGCG,+,0.00) 13(GACCCCGCCC,-,0.00) 561_WT_peak_2071 chr13 77459874 77460091 + 85 NA exon (NM_138444, exon 1 of 1) exon (NM_138444, exon 1 of 1) 558 NM_138444 115207 Hs.644125 NM_138444 HPRD:11060 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding 0.105991 0.697248 8(AGCGGCCT,-,0.00) -63(CAGCACGA,-,0.00) 1(AGAAAGAAGCGG,+,0.00) -22(GGAAGAGGAAGC,+,0.00) -164(GGGCCGGGCT,+,0.00) -142(CGAGGCGG,+,0.00) 561_WT_peak_5396 chr4 2414495 2415062 + 85 NA intron (NM_001172656, intron 1 of 11) intron (NM_001172656, intron 1 of 11) 5592 NM_001172658 57732 Hs.292056 NM_020972 HPRD:11701 ZFYVE28 LST2|LYST2 zinc finger, FYVE domain containing 28 protein-coding 0.033510 0.563380 -118(AGCCGCCT,-,0.00),196(ATGCCGCT,+,0.00),336(AGCCACCT,-,0.00) 88(GCCCAGCCCT,+,0.00),93(GCCCTGCCCT,+,0.00),313(AGGCCAGGGA,-,0.00) 561_WT_peak_4810 chr21 43843349 43843660 + 85 NA intron (NM_001001895, intron 6 of 13) MIR3|SINE|MIR 19533 NM_001001895 53347 Hs.473912 NM_018961 HPRD:06904 UBASH3A CLIP4|STS-2|TULA|TULA-1 ubiquitin associated and SH3 domain containing A protein-coding 0.019293 0.525641 122(GGGTTGGGGCTC,-,0.00) 136(CTGTGGCCCCGC,-,0.00) 561_WT_peak_806 chr1 235291984 235292379 + 85 NA promoter-TSS (NM_014765) promoter-TSS (NM_014765) 75 NM_014765 9804 Hs.533192 NM_014765 HPRD:03507 TOMM20 MAS20|MOM19|TOM20 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding 0.118987 0.666667 -147(GGCGGCGA,-,0.00),42(GGCCTCGA,-,0.00) 53(CGTCCGCG,-,0.00),215(GGCGTACG,+,0.00),217(CGTACGCG,-,0.00) -129(CCGACCCA,+,0.00),-45(GCGGTCGG,-,0.00) -19(GCCGCGGG,+,0.00) 101(TGCGCAGT,-,0.00) -78(CCGCGAAG,-,0.00) 561_WT_peak_1524 chr11 128160103 128160483 + 85 NA Intergenic Intergenic 231912 NM_005238 2113 Hs.369438 NM_005238 HPRD:01260 ETS1 ETS-1|EWSR2|p54 v-ets avian erythroblastosis virus E26 oncogene homolog 1 protein-coding 0.028947 0.540682 18(GCTGGGAAGC,+,0.00) 561_WT_peak_4220 chr2 97190116 97190347 + 85 NA Intergenic Intergenic -12233 NM_212481 10865 Hs.920 NM_006673 HPRD:12481 ARID5A MRF-1|MRF1|RP11-363D14 AT rich interactive domain 5A (MRF1-like) protein-coding 0.012987 0.387931 561_WT_peak_1806 chr12 94699416 94699636 + 85 NA non-coding (NR_037687, exon 12 of 12) non-coding (NR_037687, exon 12 of 12) 43229 NR_037687 10154 Hs.584845 NM_005761 HPRD:05036 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding 0.009091 0.429864 561_WT_peak_3994 chr2 26568382 26568764 + 85 NA promoter-TSS (NM_033505) promoter-TSS (NM_033505) -381 NM_033505 85465 Hs.189073 NM_033505 HPRD:07616 EPT1 SELI|SEPI ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific) protein-coding 0.054974 0.563969 -65(CGGCACGC,-,0.00) -124(CCGTGGCCCCGG,-,0.00) 561_WT_peak_6908 chr7 152373335 152373590 + 85 NA promoter-TSS (NM_005431) promoter-TSS (NM_005431) -212 NM_005431 7516 Hs.647093 NM_005431 HPRD:02656 XRCC2 - X-ray repair complementing defective repair in Chinese hamster cells 2 protein-coding 0.062745 0.507812 68(AAGCCTCT,+,0.00) -132(CCGCGTCCCCCG,+,0.00),-88(CCGGGGTGGCGG,-,0.00) -124(CCCGCGGC,-,0.00) -142(CGTCAGAC,+,0.00) 60(CGGGTTAA,+,0.00) -80(GCGGGGACAGCT,+,0.00) 561_WT_peak_6116 chr6 17706227 17707158 + 85 NA 5' UTR (NM_005124, exon 1 of 22) 5' UTR (NM_005124, exon 1 of 22) 373 NM_001278209 9972 Hs.601591 NM_005124 HPRD:04899 NUP153 HNUP153|N153 nucleoporin 153kDa protein-coding 0.102041 0.706009 455(GGCTCCGGTCCG,-,0.00) 566(CTCGACCGCC,-,0.00),705(CTCCGCCGCC,-,0.00) 623(AAGCCGCT,+,0.00),737(AGGCGGCT,+,0.00) 421(CGGGGAAGGGGG,-,0.00) 44(GGCCTCGA,-,0.00),99(GGCGTCGG,-,0.00),632(GCGACGCC,+,0.00) 663(CAGCGCCCGCCC,+,0.00) 172(CGCGTCCG,+,0.00) 305(CCCCCGCC,-,0.00),312(CGCCCGGC,-,0.00),481(CCCCCGCC,-,0.00) 182(TCTTGCCG,+,0.00),531(CAGCACGA,-,0.00) 271(CGGGAGAGGCAG,+,0.00) -44(CGTCGCCA,+,0.00),630(TGGCGACG,-,0.00) -62(CTGTCTCAGCCC,+,0.00) -155(TTTTCCCG,-,0.00),259(CGGGTAAG,+,0.00) 208(CCTCCGGCTCCC,-,0.00) 627(CGCTGGCGACGC,-,0.00),666(CGCCCGCCCCGC,-,0.00) -102(AAGGCGGCCC,-,0.00),330(AAGTCCGCCC,-,0.00) 90(GGCCACCGCGGC,-,0.00),220(GAGGCCATGGCG,+,0.00),222(GGCCATGGCGGA,-,0.00) 671(GCCCCGCCGC,-,0.00) 84(CCGCCAGGCCAC,-,0.00) 561_WT_peak_7189 chr8 145550384 145550884 + 85 NA promoter-TSS (NM_012079) promoter-TSS (NM_012079) -52 NM_012079 8694 Hs.521954 NM_012079 DGAT1 ARAT|ARGP1|DGAT|DIAR7 diacylglycerol O-acyltransferase 1 protein-coding 0.130000 0.736527 -43(AGCCGCTA,-,0.00) 159(GGGCCGGGGCTG,-,0.00),298(GTGCGCCCGCCC,+,0.00) 158(AGGGCCGGGG,-,0.00),302(GCCCGCCCCT,+,0.00) 68(GCCGCGGG,+,0.00) -78(CGTCGGCC,+,0.00) 17(GCGGGGCCTGGA,+,0.00) -50(GCTCCGGAGC,+,0.00),-50(GCTCCGGAGC,-,0.00) 561_WT_peak_2185 chr14 45603426 45603719 + 85 NA exon (NM_002013, exon 1 of 7) exon (NM_002013, exon 1 of 7) 160 NM_002013 2287 Hs.509226 NM_002013 HPRD:01743 FKBP3 FKBP-25|FKBP-3|FKBP25|PPIase FK506 binding protein 3, 25kDa protein-coding 0.092150 0.670068 -64(CCCGGCCGCC,-,0.00) 39(TCCACGCC,+,0.00) -73(CCGCACCAGCCC,+,0.00) -151(GCCGCGGG,+,0.00),-135(GGCGGGGG,+,0.00) 76(CCGCTGCCTCCG,-,0.00) 19(ACTGCGCA,+,0.00),21(TGCGCAGC,-,0.00) 77(CGCTGCCTCCGC,-,0.00) -67(CAGCCCGGCCGC,-,0.00),95(GAGCCAGCCCGC,-,0.00) 561_WT_peak_6128 chr6 24974564 24975125 + 85 NA intron (NM_001286446, intron 1 of 13) L1MB8|LINE|L1 -38564 NM_001286445 9750 Hs.559459 NM_014722 HPRD:12881 FAM65B C6orf32|DIFF40|DIFF48|MYONAP|PL48 family with sequence similarity 65, member B protein-coding 0.005348 0.384342 -130(CAAAACCA,+,0.00),-44(CAAAACCA,+,0.00) -141(GCATCCTGTCTC,-,0.00) 99(GCTTCGCAGT,-,0.00) 561_WT_peak_5302 chr3 158362136 158362443 + 85 NA promoter-TSS (NM_024996) promoter-TSS (NM_024996) -28 NM_024996 85476 Hs.518355 NM_024996 HPRD:07365 GFM1 COXPD1|EFG|EFG1|EFGM|EGF1|GFM|hEFG1 G elongation factor, mitochondrial 1 protein-coding 0.081433 0.577922 561_WT_peak_4702 chr20 56194012 56194729 + 85 NA intron (NM_001160417, intron 1 of 7) MIRb|SINE|MIR 1262 NM_001160419 81030 Hs.302123 NM_030776 HPRD:09484 ZBP1 C20orf183|DAI|DLM-1|DLM1 Z-DNA binding protein 1 protein-coding 0.026499 0.500000 481(AACCGCTT,-,0.00),520(AGACGCTA,-,0.00) 100(TAGCCCTCCCGG,+,0.00) -127(GGCCTCGA,-,0.00) 296(CCAAACCG,+,0.00),304(CAAAACCA,+,0.00) 561_WT_peak_2774 chr16 30076536 30076949 + 85 NA promoter-TSS (NM_184041) promoter-TSS (NM_184041) -252 NM_184041 226 Hs.513490 NM_000034 HPRD:00070 ALDOA ALDA|GSD12|HEL-S-87p aldolase A, fructose-bisphosphate protein-coding 0.113801 0.702899 69(CCGCCCTCCCCC,+,0.00) 69(CCGCCCTCCCCC,+,0.00) 216(TCGGCGCC,+,0.00) 217(CGGCGCCCGCCC,+,0.00) 221(GCCCGCCCCT,+,0.00) 156(TAGCGACC,-,0.00) 186(GTCCGAGG,-,0.00) 136(AGGAGCAGAAGG,+,0.00) -17(CCCGGGCCGCGC,-,0.00),-3(GCTGGGCCTGGG,+,0.00) -129(GTCGGCTCCGCG,-,0.00) -43(CCGCGAAG,-,0.00) 561_WT_peak_6268 chr6 30685321 30685545 + 85 NA promoter-TSS (NM_014641).4 promoter-TSS (NM_014641).4 25 NM_014641 9656 Hs.653495 NM_014641 HPRD:16252 MDC1 NFBD1 mediator of DNA-damage checkpoint 1 protein-coding 0.080357 0.608889 49(CGTAGGCG,-,0.00) -83(CGTCCGAC,+,0.00),-82(GTCCGACG,-,0.00) -147(CCAAACCG,+,0.00) -158(CCCGCGCA,+,0.00) 561_WT_peak_2692 chr16 10837678 10837898 + 85 NA intron (NM_001278506, intron 1 of 9) CpG 145 NM_002484 4682 Hs.81469 NM_002484 HPRD:02611 NUBP1 NBP|NBP1|NBP35 nucleotide binding protein 1 protein-coding 0.090909 0.669683 561_WT_peak_4610 chr20 33680372 33680832 + 85 NA promoter-TSS (NM_199368) promoter-TSS (NM_199368) 16 NM_199368 26133 Hs.168073 NM_015638 HPRD:09238 TRPC4AP C20orf188|PPP1R158|TRRP4AP|TRUSS transient receptor potential cation channel, subfamily C, member 4 associated protein protein-coding 0.113043 0.731020 6(CTCGGCCGGC,-,0.00),107(GGCGGCGGAG,+,0.00) -23(AGCCGCCA,-,0.00),25(AGCCGCTA,-,0.00),76(AGCGGCCT,-,0.00) 183(GGCGTGGA,-,0.00) -6(CCGACCGT,+,0.00),7(TCGGCCGG,-,0.00) 56(CGTCGGAC,+,0.00) 63(CAAACAGGAAGC,+,0.00) 212(TGCGCGGC,-,0.00) -88(AGCTGGCCCTGC,-,0.00) 82(CTCGGGGCCGCG,+,0.00) 41(GCCGCCATGTCT,+,0.00) 36(GCGCCGCCGC,-,0.00) 561_WT_peak_6706 chr7 72476686 72476928 + 85 NA promoter-TSS (NR_040583) promoter-TSS (NR_040583) 163 NR_003614 5380 Hs.292996 NR_003614 PMS2L2 PMS4 postmeiotic segregation increased 2-like 2 pseudogene pseudo 0.095041 0.679012 62(GAATTCGGCCCT,-,0.00) -30(AGCGGCAT,-,0.00) -145(GGGCTCGCGGTC,-,0.00) 54(CGGGCAAA,+,0.00) 63(AATTCGGCCC,-,0.00) -50(CCGCCTCG,-,0.00) 561_WT_peak_2650 chr16 1525021 1525351 + 85 NA promoter-TSS (NM_001114331) promoter-TSS (NM_001114331) -101 NM_001114331 1186 Hs.459649 NM_001287 HPRD:04103 CLCN7 CLC-7|CLC7|OPTA2|OPTB4|PPP1R63 chloride channel, voltage-sensitive 7 protein-coding 0.145455 0.755287 -38(CCGCGCTCCCGG,+,0.00) -22(TCGTGGCG,+,0.00) -106(GAGCGACG,-,0.00) 79(GGGAGGCGAATG,+,0.00) 137(CCGGGGCCTGAG,+,0.00) -45(CTGGGAGCCGCG,+,0.00) -18(GGCGCCGCCC,-,0.00),45(AAGGCGGCCC,-,0.00) 561_WT_peak_6459 chr6 119671073 119671687 + 85 NA promoter-TSS (NM_005907) promoter-TSS (NM_005907) -449 NM_005907 4121 Hs.102788 NM_005907 HPRD:05066 MAN1A1 HUMM3|HUMM9|MAN9 mannosidase, alpha, class 1A, member 1 protein-coding 0.087948 0.645528 78(TCTGCCTCCTCC,+,0.00) 46(CCCGGGAGGCGC,-,0.00) 366(CGTATGCG,-,0.00) 105(GCGGTCGG,-,0.00) -115(GGGGCCGGGA,-,0.00) 396(AAAAACCG,+,0.00) -145(GCGGGGCCCGGC,+,0.00),-117(GCGGGGCCGGGA,+,0.00),1(CGCTGGCCTCGG,-,0.00) -118(CGCGGGGCCGGG,+,0.00) -43(CCGAGAAG,-,0.00) -143(GGGGCCCGGCCG,+,0.00) 561_WT_peak_1825 chr12 100535891 100536627 + 85 NA intron (NM_001006947, intron 1 of 12) CpG 383 NM_001006947 23074 Hs.620701 NM_015054 HPRD:13811 UHRF1BP1L SHIP164 UHRF1 binding protein 1-like protein-coding 0.112772 0.704206 274(GGTGGAGGCCGA,-,0.00) 549(CACGGCCGCC,-,0.00) 220(AGCCGCCA,-,0.00) 288(GGCGCCGA,-,0.00) 134(CCCCCGGC,-,0.00),556(GCCGCGGG,+,0.00) 198(GTCCGAAG,-,0.00) 32(GCCGCGCC,+,0.00) 135(CCCCGGCGCCGC,-,0.00),140(GCGCCGCCGGCG,+,0.00) 114(GGGCCGATTC,+,0.00) 545(CCGCCACG,-,0.00) 221(GCCGCCAGGCGC,+,0.00),544(GCCGCCACGGCC,+,0.00),546(CGCCACGGCCGC,-,0.00) 229(GCGCCGCCGC,-,0.00) 561_WT_peak_1616 chr12 13153959 13154249 + 85 NA promoter-TSS (NM_015987) promoter-TSS (NM_015987) 728 NR_002774 93164 Hs.593282 NR_002774 HTR7P1 HTR7P 5-hydroxytryptamine (serotonin) receptor 7 pseudogene 1 pseudo 0.106897 0.639175 46(TCCGTCGG,-,0.00) -5(GCCGCGGG,+,0.00) 45(GTCCGTCG,-,0.00),55(GTCCGAGG,-,0.00) -37(CTCCGAGCCGCG,+,0.00),-11(TGTGGAGCCGCG,+,0.00) 0(GGGCCGAGCC,+,0.00) -110(CCGACAAG,-,0.00) -13(GCTGTGGAGC,+,0.00),84(GCTCGGCAGC,-,0.00) 561_WT_peak_4061 chr2 47403986 47404296 + 85 NA promoter-TSS (NM_001743) promoter-TSS (NM_001743) -401 NM_001743 805 Hs.468442 NM_001743 HPRD:00242 CALM2 CAMII|PHKD|PHKD2 calmodulin 2 (phosphorylase kinase, delta) protein-coding 0.080645 0.578778 -68(GGCGGCAGAG,+,0.00) 85(CGCGTACC,+,0.00) 12(TCCCGCCCCT,+,0.00) -98(TCGGGCCG,+,0.00) -117(CGGCTTCTGCCG,-,0.00) -96(GGGCCGCGCT,+,0.00) 561_WT_peak_4385 chr2 182321752 182322060 + 85 NA 5' UTR (NM_000885, exon 1 of 28) 5' UTR (NM_000885, exon 1 of 28) 287 NM_000885 3676 Hs.440955 NM_000885 HPRD:01894 ITGA4 CD49D|IA4 integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) protein-coding 0.094156 0.689320 121(CGCGTAGG,+,0.00) 61(AGGCCCGGGC,-,0.00) 53(GGGCTGGGAGGC,-,0.00) -81(TGGGCGGT,-,0.00),85(TGCGCAGC,-,0.00) 55(GCTGGGAGGC,+,0.00) 561_WT_peak_4738 chr21 9826901 9827034 + 85 NA TTS (NR_037421) TTS (NR_037421) 764 NR_037458 100500815 NR_037458 miRBase:MI0016088 MIR3687-1 MIR3687 microRNA 3687-1 ncRNA 0.150376 0.746269 -155(TCGTCCTCCTCG,+,0.00) -111(CCCCCGGC,-,0.00) -160(GTCCGTCG,-,0.00) -92(CCGCGTCG,-,0.00) -82(GCCTCGCCGC,-,0.00) 561_WT_peak_5896 chr5 130971174 130971515 + 85 NA promoter-TSS (NM_016340) promoter-TSS (NM_016340) -415 NM_001164390 51735 Hs.483329 NM_016340 HPRD:11483 RAPGEF6 KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2 Rap guanine nucleotide exchange factor (GEF) 6 protein-coding 0.058651 0.526316 -17(AGCCGCCA,-,0.00) 61(CCGACAGA,+,0.00) -149(CAGAACCG,+,0.00),-105(CAAATCCG,+,0.00),-74(CGGCTTTG,-,0.00) 561_WT_peak_2142 chr14 24578189 24578482 + 85 NA Intergenic Intergenic -5571 NM_001163484 80344 Hs.525251 NM_025230 HPRD:18297 DCAF11 PRO2389|WDR23 DDB1 and CUL4 associated factor 11 protein-coding 0.006826 0.418367 -48(GGGTGCTGAAGG,+,0.00) 561_WT_peak_141 chr1 28525934 28526279 + 85 NA TTS (NM_014280) TTS (NM_014280) -5659 NM_001164722 5724 Hs.77542 NM_000952 HPRD:01422 PTAFR PAFR platelet-activating factor receptor protein-coding 0.014493 0.485549 561_WT_peak_3646 chr19 13898533 13898885 + 85 NA Intergenic Intergenic -7565 NM_023072 65249 Hs.466015 NM_023072 HPRD:15904 ZSWIM4 - zinc finger, SWIM-type containing 4 protein-coding 0.039773 0.594901 -156(CCCCCGCC,-,0.00) -142(TGGCACGA,-,0.00) -21(CGTCGCGA,+,0.00) -46(GCTGCGCA,+,0.00) -153(CCGCCTCG,-,0.00) 54(GGGGGCTGGCAG,+,0.00) 561_WT_peak_2089 chr13 100089196 100089383 + 85 NA Intergenic Intergenic -30735 NR_039765 100616144 NR_039765 MIR548AN - microRNA 548an ncRNA 0.080214 0.638298 -128(AGACGCCT,-,0.00) -146(CCAGGAAGGCGG,-,0.00) -40(TCGTGCCT,+,0.00) -97(CAAAACCT,+,0.00) -87(GCCCCCCAGC,-,0.00) 561_WT_peak_5932 chr5 135249914 135250080 + 85 NA Intergenic Intergenic -16009 NM_012159 26223 Hs.591275 NM_012159 FBXL21 FBL3B|FBXL3B|FBXL3P|Fbl21 F-box and leucine-rich repeat protein 21 (gene/pseudogene) protein-coding 0.006024 0.437126 561_WT_peak_3247 chr17 48944309 48944803 + 85 NA promoter-TSS (NM_001243885) promoter-TSS (NM_001243885) 516 NR_038458 400604 Hs.641441 NR_038458 ENSG00000229980 TOB1-AS1 - TOB1 antisense RNA 1 ncRNA 0.064777 0.583838 -29(CCGCCCCGCCGG,+,0.00),6(CAGGCCTCCCGG,+,0.00) -64(GGGCTGGGGGTG,-,0.00) 87(CGACACGA,-,0.00) 285(CGGGTAAG,+,0.00) -32(CTCCCGCCCCGC,-,0.00) -73(CGTGGAGCCGGG,+,0.00) 32(CGACTCGG,+,0.00) 561_WT_peak_7100 chr8 103818627 103818855 + 85 NA Intergenic CpG 57656 NM_148174 51582 Hs.459106 NM_015878 HPRD:07443 AZIN1 OAZI|OAZIN|ODC1L antizyme inhibitor 1 protein-coding 0.087719 0.707424 -139(CGCCCCGGCAGC,+,0.00) -45(CCGCCCTCCCGC,+,0.00),-10(CCGCCTCCCCCG,+,0.00) -38(CCCGCGGC,-,0.00),-13(CCCCCGCC,-,0.00) -146(TCCTCTCCGCCC,+,0.00) 561_WT_peak_5432 chr4 26090127 26090407 + 85 NA Intergenic Intergenic 174453 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52 small integral membrane protein 20 protein-coding 0.003571 0.398577 99(CTGTTTTG,-,0.00) 561_WT_peak_3316 chr17 65448911 65449153 + 85 NA intron (NM_181671, intron 1 of 9) L1ME1|LINE|L1 75635 NM_012417 26207 Hs.591185 NM_012417 HPRD:05504 PITPNC1 M-RDGB-beta|MRDGBbeta|RDGB-BETA|RDGBB|RDGBB1 phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding 0.012397 0.345679 561_WT_peak_2001 chr13 40962868 40963297 + 85 NA intron (NR_024506, intron 5 of 5) intron (NR_024506, intron 5 of 5) 92061 NR_024507 646982 Hs.287664 NR_024505 LINC00598 TTL long intergenic non-protein coding RNA 598 ncRNA 0.020979 0.551163 -124(CCGTCCTCCTCC,+,0.00) -80(GGCGGCAGAG,+,0.00) -83(CGAGGCGG,+,0.00) -135(GCCCATGGCCAC,-,0.00) 561_WT_peak_1992 chr13 37573255 37573577 + 85 NA promoter-TSS (NM_013338) promoter-TSS (NM_013338) 88 NM_001142364 29880 Hs.507769 NM_013338 HPRD:05193 ALG5 bA421P11.2 ALG5, dolichyl-phosphate beta-glucosyltransferase protein-coding 0.127329 0.724458 -74(TGCGCGGG,-,0.00),-22(GCCGCGCC,+,0.00) 82(ACCCGGCCCCGC,-,0.00) 81(GACCCGGCCC,-,0.00) 137(CGAGGCGG,+,0.00) -31(GCCGCCAGCGCC,+,0.00) 87(GCCCCGCCGC,-,0.00) 561_WT_peak_5575 chr4 108911143 108911382 + 85 NA intron (NM_001184705, intron 1 of 8) CpG 392 NM_005327 3033 Hs.438289 NM_005327 ENSG00000138796 HADH HAD|HADH1|HADHSC|HCDH|HHF4|MSCHAD|SCHAD hydroxyacyl-CoA dehydrogenase protein-coding 0.112971 0.691667 -54(CTTGGCCGCC,-,0.00) 32(GCGCCTCCCGGG,+,0.00) 4(CCGCCCGA,+,0.00) 30(CCGCGCCTCCCG,-,0.00) -50(GCCGCCCA,+,0.00) -55(GCTTGGCCGC,-,0.00) 561_WT_peak_735 chr1 221915736 221916412 + 85 NA promoter-TSS (NM_007207) promoter-TSS (NM_007207) -556 NM_007207 11221 Hs.497822 NM_007207 HPRD:12320 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding 0.100592 0.657312 336(ATGTCGCT,+,0.00) 318(CCGCCCGCCCGC,+,0.00),322(CCGCCCGCCCGC,+,0.00) 262(TCGACGCG,+,0.00) -156(CGGCAGGA,-,0.00) 391(CACCTACTTCCG,-,0.00) 46(CGTCCCTA,+,0.00) -136(TTTACCAG,-,0.00) 155(AGCGCGCA,+,0.00) 158(GCGCAGCCAGGG,+,0.00) -104(CGCTGCTCCGCT,-,0.00),182(CTCCGAGCCGCG,+,0.00) 74(CCGAGTCG,-,0.00),263(CGACGCGG,+,0.00) 561_WT_peak_1719 chr12 56031373 56031519 + 85 NA exon (NM_206899, exon 1 of 1) exon (NM_206899, exon 1 of 1) 770 NM_206899 121130 Hs.554551 NM_206899 HPRD:14895 OR10P1 OR10P1P|OR10P2P|OR10P3P|OR12-7|OST701 olfactory receptor, family 10, subfamily P, member 1 protein-coding 0.047945 0.585034 561_WT_peak_5376 chr3 197381495 197381913 + 85 NA Intergenic CpG 19743 NR_030627 100126321 NR_030627 miRBase:MI0005714 MIR922 MIRN922|hsa-mir-922 microRNA 922 ncRNA 0.112440 0.725537 -10(GGCGGCCAAG,+,0.00) -140(CGGGGGAGGCGG,-,0.00),166(CCGGGAAGGCGC,-,0.00) 162(GGGGCCGGGA,-,0.00) 72(GCCGGGGG,+,0.00) 64(CCGCCTCTGCCG,-,0.00),95(CCGCCGCTTCCG,-,0.00) -61(GCCGCGCC,+,0.00),-38(GCCGCCCA,+,0.00) 73(CCGGGGGCAGGG,+,0.00),160(GCGGGGCCGGGA,+,0.00) 159(CGCGGGGCCGGG,+,0.00) -45(GCCCAGGGCCGC,-,0.00),0(GGCCAAGGCGCG,-,0.00) -144(GCTGCGGGGG,+,0.00) 11(GCGGCTGGGCTG,+,0.00) 561_WT_peak_2891 chr16 70415027 70415271 + 85 NA 3' UTR (NM_006927, exon 7 of 7) 3' UTR (NM_006927, exon 7 of 7) 34325 NM_018332 55308 Hs.656037 NM_018332 HPRD:07732 DDX19A DDX19-DDX19L|DDX19L DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A protein-coding 0.094262 0.673469 -27(CCGCTCTCCTCC,+,0.00) -154(CGCGGCCGAG,+,0.00) -87(CCGGGCAGGCGG,-,0.00) 13(CCGCCCGA,+,0.00) -67(GCCGGGCG,+,0.00) -78(CGGGGAAA,+,0.00) 561_WT_peak_1611 chr12 12878013 12878335 + 85 NA promoter-TSS (NM_001130415) promoter-TSS (NM_001130415) -677 NM_001130415 81575 Hs.23388 NM_030817 HPRD:13153 APOLD1 VERGE apolipoprotein L domain containing 1 protein-coding 0.139752 0.678019 -96(GGAGCAGGGCGC,-,0.00) -132(TCGACGCG,+,0.00) 11(GCGCGCCTGCCC,+,0.00),86(GAGCGCCCGCCC,+,0.00) 50(CGGACGCG,-,0.00),126(TGCGTACG,+,0.00),128(CGTACGTG,-,0.00) -81(GCCGGGGG,+,0.00) -10(TCGCGCCG,+,0.00) 47(CCTCGGAC,+,0.00) -86(GCGCGGCCGGGG,+,0.00),-13(CGCTCGCGCCGG,-,0.00),14(CGCCTGCCCCGC,-,0.00) 40(CCCGGAGCCTCG,+,0.00) 561_WT_peak_6193 chr6 27106888 27107148 + 85 NA promoter-TSS (NM_003495) promoter-TSS (NM_003495) -70 NM_003495 8294 Hs.248172 NM_003495 HIST1H4I H4/m|H4FM|H4M histone cluster 1, H4i protein-coding 0.026923 0.544061 -50(CGGTTTTC,-,0.00) 561_WT_peak_3854 chr19 49977432 49977668 + 85 NA promoter-TSS (NM_001204503) promoter-TSS (NM_001204503) 84 NM_001278638 2323 Hs.428 NM_001459 HPRD:02477 FLT3LG FL|FLT3L fms-related tyrosine kinase 3 ligand protein-coding 0.021186 0.649789 10(GGGAGCAGAGGG,+,0.00) -21(GCGGAGCCAGGG,+,0.00) -23(GGGCGGAGCC,+,0.00) 561_WT_peak_6614 chr7 23145426 23145632 + 85 NA promoter-TSS (NM_018846) promoter-TSS (NM_018846) 176 NR_033329 55975 Hs.654817 NM_018846 HPRD:13927 KLHL7 KLHL6|SBBI26 kelch-like family member 7 protein-coding 0.116505 0.700483 13(GCCCGGCCCG,+,0.00) -124(CGCCCGGC,-,0.00),12(CGCCCGGC,-,0.00) -156(TAGCGTCG,-,0.00),-153(CGTCGCTC,+,0.00) 8(CCCTCGCCCGGC,-,0.00) 561_WT_peak_3626 chr19 11390610 11390847 + 85 NA Intergenic Intergenic -16087 NM_001282509 26526 Hs.579784 NM_012466 HPRD:18197 TSPAN16 TM-8|TM4-B|TM4SF16 tetraspanin 16 protein-coding 0.004219 0.474790 -31(TGGTTTTG,-,0.00) 561_WT_peak_1248 chr11 35034341 35034514 + 85 NA Intergenic Intergenic 71043 NR_039836 100616437 NR_039836 MIR1343 - microRNA 1343 ncRNA 0.005780 0.408046 561_WT_peak_1721 chr12 56323842 56324207 + 85 NA promoter-TSS (NM_001345) promoter-TSS (NM_001345) -922 NM_001345 1606 Hs.524488 NM_001345 HPRD:00517 DGKA DAGK|DAGK1|DGK-alpha diacylglycerol kinase, alpha 80kDa protein-coding 0.002740 0.398907 -83(AGAGGCTT,-,0.00) 561_WT_peak_5181 chr3 101443336 101443868 + 85 NA intron (NM_024548, intron 1 of 10) CpG 108 NM_024548 79598 Hs.444135 NM_024548 HPRD:08014 CEP97 2810403B08Rik|LRRIQ2 centrosomal protein 97kDa protein-coding 0.075188 0.594747 -61(GTTTCCGGCTCC,-,0.00) -20(GCGGGAGGACGG,-,0.00) 247(GGCGTCGC,-,0.00) -23(GCCGCGGG,+,0.00) 260(GGGCCGAGCGGG,-,0.00) 43(CGGCTTTG,-,0.00) -29(CACAGAGCCGCG,+,0.00),191(CGCGGAGGCGGG,+,0.00),297(CGCGGCCCGGCG,-,0.00) 188(CGTCGCGG,+,0.00),249(CGTCGCGG,+,0.00) 305(GGCGCCCTGGCT,+,0.00) 298(GCGGCCCGGCGC,+,0.00),306(GCGCCCTGGCTC,+,0.00) 561_WT_peak_6589 chr7 7679811 7680057 + 85 NA promoter-TSS (NR_034084) promoter-TSS (NR_034084) -408 NR_034084 729852 Hs.652371 NR_034084 RPA3OS RPA3-AS1 RPA3 opposite strand ncRNA 0.060976 0.558704 33(GGCGTTGA,-,0.00) 561_WT_peak_4852 chr22 22020328 22020567 + 85 NA intron (NM_148175, intron 1 of 20) CpG 174 NM_148176 23759 Hs.438587 NM_014337 HPRD:08472 PPIL2 CYC4|CYP60|Cyp-60|UBOX7|hCyP-60 peptidylprolyl isomerase (cyclophilin)-like 2 protein-coding 0.087866 0.629167 -122(TCGCCGCC,+,0.00) 9(CCCTCTCAGCTA,+,0.00) -121(CGCCGCCGCCGC,-,0.00) -115(CGCCGCTCCGCC,-,0.00) -109(TCCGCCATGGGG,+,0.00) 561_WT_peak_4299 chr2 131100518 131100898 + 85 NA promoter-TSS (NM_032357) promoter-TSS (NM_032357) 219 NM_033416 92856 Hs.91579 NM_033416 HPRD:10002 IMP4 BXDC4 IMP4, U3 small nucleolar ribonucleoprotein protein-coding 0.100000 0.666667 -76(GGTTCCGGGGCT,-,0.00) -121(ATGTGGCT,+,0.00) 23(CCCGGGAGGAGG,-,0.00) 20(AGGCCCGGGA,-,0.00) 128(CGGCACGC,-,0.00) 55(AGGAAGGAGCGG,+,0.00) 209(TGGTTTTG,-,0.00) -95(AGCGGCTCCGGG,-,0.00),-87(CGGGGCTCCGGG,-,0.00) -24(GCTGCGCCGC,+,0.00),-24(GCTGCGCCGC,-,0.00),-19(GCCGCGAGGC,+,0.00),66(GCTGCGGCGC,+,0.00) -14(GAGGCCCGCCTG,+,0.00) 561_WT_peak_5271 chr3 137906307 137906544 + 85 NA exon (NM_001267041, exon 1 of 21) exon (NM_001267041, exon 1 of 21) 335 NM_001267042 25852 Hs.744868 NM_014154 HPRD:09992 ARMC8 GID5|HSPC056|VID28 armadillo repeat containing 8 protein-coding 0.088608 0.693277 -16(CGCGGCCGCC,-,0.00) -11(CCGCCCGCCCGC,+,0.00) 561_WT_peak_6418 chr6 106612043 106612738 + 85 NA Intergenic Intergenic 65653 NM_182907 639 Hs.436023 NM_001198 HPRD:04572 PRDM1 BLIMP1|PRDI-BF1 PR domain containing 1, with ZNF domain protein-coding 0.018705 0.541667 -127(TCCCTGGCCT,+,0.00),72(GCCCTGCCCT,+,0.00) -59(CCTCCCTGTTTC,-,0.00),225(GAGACAGCAAGC,+,0.00) 561_WT_peak_6580 chr7 5862470 5862757 + 85 NA promoter-TSS (NR_023382) promoter-TSS (NR_023382) -178 NR_023382 401303 Hs.372707 NR_023382 ENSG00000235944 ZNF815P ZNF815 zinc finger protein 815, pseudogene pseudo 0.031359 0.524306 101(CTAACCGGAAGC,+,0.00) 115(GGCGTCGT,-,0.00) 34(CCCTGCCAGCCC,+,0.00) 42(GCCCATGGCCAC,-,0.00) 561_WT_peak_3051 chr17 16120405 16120721 + 85 NA promoter-TSS (NM_004278) promoter-TSS (NM_004278) 54 NM_004278 9487 Hs.499793 NM_004278 HPRD:12071 PIGL CHIME phosphatidylinositol glycan anchor biosynthesis, class L protein-coding 0.050633 0.589905 64(GGAGCAGGGAGG,-,0.00) 83(GGAGCCGAAAGC,+,0.00) -19(ATGTGGCT,+,0.00) 6(CGGTCTTG,-,0.00) 82(GGGAGCCGAAAG,+,0.00) -58(ACTGCGCA,+,0.00) 561_WT_peak_5972 chr5 142985930 142986138 + 85 NA Intergenic Intergenic -73391 NR_049829 100846991 NR_049829 miRBase:MI0018176 MIR5197 - microRNA 5197 ncRNA 0.014423 0.444976 561_WT_peak_3779 chr19 42579806 42579996 + 84 NA promoter-TSS (NM_022752) promoter-TSS (NM_022752) -389 NM_022752 64763 Hs.13323 NM_022752 HPRD:15853 ZNF574 FP972 zinc finger protein 574 protein-coding 0.084211 0.643979 11(CTCCGCCGCC,-,0.00) -104(CCGCTCCAGCCC,+,0.00) -1(CCCGCGGC,-,0.00) -140(CGGGGAAA,+,0.00) 10(GCTCCGCCGC,-,0.00) 561_WT_peak_2637 chr15 102521089 102521362 + 84 NA Intergenic (TTAGGG)n|Simple_repeat|Simple_repeat -1929 NR_051985 100288486 Hs.644359 NR_034090 ENSG00000248472 DDX11L9 - DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 like 9 pseudo 0.003663 0.510949 561_WT_peak_1432 chr11 82867621 82867802 + 84 NA promoter-TSS (NM_015885) promoter-TSS (NM_015885) -426 NM_015885 51585 Hs.128959 NM_015885 PCF11 - PCF11 cleavage and polyadenylation factor subunit protein-coding 0.060773 0.681319 -107(AGACGCTA,-,0.00) -18(CGGGGCAGGCGG,-,0.00) -33(CGTCGGTA,+,0.00) -140(AGCTGGACCCGC,-,0.00) -133(CCCGCCCTGGCT,+,0.00) 561_WT_peak_3865 chr19 50380915 50381145 + 84 NA promoter-TSS (NM_001098633) promoter-TSS (NM_001098633) 348 NM_001168222 79735 Hs.631587 NM_024682 HPRD:15471 TBC1D17 - TBC1 domain family, member 17 protein-coding 0.082609 0.597403 -134(GGAGGAGGCGGG,-,0.00) -108(GGCGGCGA,-,0.00) 16(CGGCACGG,-,0.00) 561_WT_peak_1598 chr12 12134070 12134369 + 84 NA Intergenic Intergenic -55112 NR_046487 100873754 NR_046487 ENSG00000207449 RNU6-19P RNU6-19 RNA, U6 small nuclear 19, pseudogene snRNA 0.010033 0.350000 561_WT_peak_1428 chr11 82611647 82611898 + 84 NA promoter-TSS (NM_145018) promoter-TSS (NM_145018) -215 NM_005040 5547 Hs.523936 NM_005040 HPRD:08352 PRCP HUMPCP|PCP prolylcarboxypeptidase (angiotensinase C) protein-coding 0.031873 0.547619 -145(TCGTGCCA,+,0.00) 561_WT_peak_1521 chr11 126173854 126174139 + 84 NA exon (NM_014026, exon 1 of 6) exon (NM_014026, exon 1 of 6) 349 NM_014026 28960 Hs.504249 NM_014026 HPRD:16787 DCPS DCS1|HINT-5|HINT5|HSL1 decapping enzyme, scavenger protein-coding 0.077193 0.674825 8(GGAGGAGGCCCA,-,0.00) -112(AGGCCGCT,+,0.00) -58(CCGCCTCCGCGG,+,0.00) -17(GCAAGAGGAAGC,+,0.00) -89(GCGGGGCCAGCG,+,0.00) -117(CAGCCAGGCCGC,-,0.00) 561_WT_peak_4685 chr20 50021300 50021851 + 84 NA intron (NM_001258296, intron 9 of 10) intron (NM_001258296, intron 9 of 10) 47939 NR_036162 100422889 NR_036162 MIR3194 - microRNA 3194 ncRNA 0.025408 0.570652 314(CCACCCTCCACC,+,0.00) -67(AGAGGCCT,-,0.00),185(AGCCACCT,-,0.00) -160(CCCTCCCAGGCC,+,0.00) 561_WT_peak_4112 chr2 67624532 67624769 + 84 NA exon (NM_019002, exon 1 of 6) exon (NM_019002, exon 1 of 6) 208 NM_019002 54465 Hs.353022 NM_019002 HPRD:13282 ETAA1 ETAA16 Ewing tumor-associated antigen 1 protein-coding 0.092827 0.647059 -53(GGCGGCGGAG,+,0.00),-12(GGCGGCTGAG,+,0.00) -144(AAGCGGCT,+,0.00),-41(ATGCGGCT,+,0.00),-13(AGGCGGCT,+,0.00) -62(CAAAACAG,+,0.00) -152(GAAAGAAGAAGC,+,0.00) 21(GCGGGGCTAGAG,+,0.00) -4(AGATCGGCCC,-,0.00) 45(GGCCAGTGCGGC,-,0.00) 561_WT_peak_5908 chr5 131832355 131832690 + 84 NA Intergenic CpG -6057 NM_002198 3659 Hs.436061 NM_002198 HPRD:00961 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding 0.095522 0.708333 -159(CGGTTTCG,-,0.00) -34(CCTGCGGCTCTC,-,0.00) -96(AGGCCGCGTT,+,0.00) 72(GCCTTGCAGC,-,0.00) 561_WT_peak_6911 chr7 155088769 155089163 + 84 NA promoter-TSS (NM_198337) promoter-TSS (NM_198337) -520 NM_198337 3638 Hs.520819 NM_005542 HPRD:03633 INSIG1 CL-6|CL6 insulin induced gene 1 protein-coding 0.088832 0.668354 201(CCGCCTCCCGGC,+,0.00) -137(CTCCCTCAGCCC,+,0.00) -107(CAAAGCCG,+,0.00) -71(CGACTCGG,+,0.00) 122(CCCGCCATTGCG,+,0.00) 561_WT_peak_3853 chr19 49956697 49957243 + 84 NA intron (NM_001145396, intron 1 of 15) intron (NM_001145396, intron 1 of 15) 497 NM_001145396 126133 Hs.719998 NM_153329 HPRD:14394 ALDH16A1 - aldehyde dehydrogenase 16 family, member A1 protein-coding 0.053114 0.594150 -129(CGGTTTTT,-,0.00),74(CGGTTTTC,-,0.00) -54(GCCGCCCA,+,0.00) -12(CTTGGCGG,+,0.00) 561_WT_peak_6635 chr7 32535157 32535524 + 84 NA promoter-TSS (NM_001139499) promoter-TSS (NM_001139499) 164 NM_015060 23080 Hs.128056 NM_015060 HPRD:13788 AVL9 KIAA0241 AVL9 homolog (S. cerevisiase) protein-coding 0.100817 0.711957 140(CCTTCCGGGGCC,-,0.00) -15(CCCGCGGC,-,0.00),110(CCCCCGCC,-,0.00) -24(TCGTGCGG,+,0.00),184(TCGTGCAG,+,0.00) -57(CGTCAGAC,+,0.00) -6(GCCGCCCA,+,0.00) -41(CTTGGCGG,+,0.00) 561_WT_peak_5425 chr4 17616261 17616485 + 84 NA promoter-TSS (NM_025205) promoter-TSS (NM_025205) 100 NM_025205 80306 Hs.731966 NM_025205 MED28 1500003D12Rik|EG1|magicin mediator complex subunit 28 protein-coding 0.049107 0.577778 -82(CCTTCCGGGCCA,-,0.00) -146(TGGCGGCT,+,0.00) -102(CCCCCTCAGGCC,+,0.00) -98(CTCAGGCCCCGC,-,0.00) 561_WT_peak_1225 chr11 17307395 17307574 + 84 NA intron (NM_005013, intron 2 of 13) (CA)n|Simple_repeat|Simple_repeat 9198 NM_005013 4925 Hs.654599 NM_005013 HPRD:09726 NUCB2 HEL-S-109|NEFA nucleobindin 2 protein-coding 0.022346 0.405556 -150(AACCACTT,-,0.00) -92(CGCGCACG,+,0.00) -120(CAAAACAG,+,0.00) -119(AAAACAGGAAAC,+,0.00) 561_WT_peak_823 chr1 244614683 244615332 + 84 NA exon (NM_001126, exon 1 of 13) exon (NM_001126, exon 1 of 13) 429 NM_001126 159 Hs.498313 NM_001126 HPRD:00050 ADSS ADEH|ADSS 2 adenylosuccinate synthase protein-coding 0.090909 0.706154 48(GCTCCCGGGCCC,-,0.00),54(GGGCCCGGCTTC,+,0.00),192(TCCTCCGGGCCG,-,0.00) 351(AGCCACAT,-,0.00) -86(CCGACCTCCCGC,+,0.00),13(CCGAGTTCCCGG,+,0.00),44(CCGAGCTCCCGG,+,0.00),394(CCGCCCCGCCGG,+,0.00) 151(TCGTCGCC,+,0.00) -153(CCCCGCCAGCCC,+,0.00) 391(CCCCCGCC,-,0.00) -114(TTCACCCG,-,0.00) 148(CCTTCGTCGCCC,-,0.00) 161(ACTGCGCA,+,0.00),200(GCCGCGCC,+,0.00),475(CCCGCGCA,+,0.00) 51(CCCGGGCCCGGC,-,0.00),380(GGCCGGCCCCGC,-,0.00),386(CCCCGCCCCCGC,-,0.00),391(CCCCCGCCCCGC,-,0.00) 10(GGTCCGAGTT,+,0.00),198(GGGCCGCGCC,+,0.00) 267(CGCCATGGCTCC,-,0.00) 32(GAGCCAGGCAGC,-,0.00),399(CCGCCGGGCCGC,-,0.00),418(CAGCCAGTCCCC,-,0.00) 561_WT_peak_5681 chr5 32542729 32542920 + 84 NA Intergenic L1MB7|LINE|L1 -42781 NM_006713 10923 Hs.229641 NM_006713 HPRD:02737 SUB1 P15|PC4|p14 SUB1 homolog (S. cerevisiae) protein-coding 0.015707 0.468750 561_WT_peak_4021 chr2 33722329 33722518 + 84 NA intron (NM_001139488, intron 1 of 17) intron (NM_001139488, intron 1 of 17) -16519 NM_015376 25780 Hs.143674 NM_015376 HPRD:15213 RASGRP3 GRP3 RAS guanyl releasing protein 3 (calcium and DAG-regulated) protein-coding 0.000000 0.373684 561_WT_peak_4059 chr2 47402531 47402857 + 84 NA intron (NM_001743, intron 1 of 5) intron (NM_001743, intron 1 of 5) 1046 NM_001743 805 Hs.468442 NM_001743 HPRD:00242 CALM2 CAMII|PHKD|PHKD2 calmodulin 2 (phosphorylase kinase, delta) protein-coding 0.055215 0.559633 123(CCCCCCTCCCCC,+,0.00) 5(AGACACTT,-,0.00) 124(CCCCCTCCCCCG,+,0.00) 117(TCGAGGCC,+,0.00) 130(CCCCCGCC,-,0.00) -162(CAAGACCG,+,0.00) 152(GCCCCGCAGC,-,0.00) 38(CCGGCCTGGGTG,+,0.00) 561_WT_peak_2457 chr15 44829348 44829632 + 84 NA promoter-TSS (NR_034171) promoter-TSS (NR_034171) 224 NM_003758 8669 Hs.404056 NM_003758 HPRD:04883 EIF3J EIF3S1|eIF3-alpha|eIF3-p35 eukaryotic translation initiation factor 3, subunit J protein-coding 0.119718 0.715789 80(CTGGGAAGGCGA,-,0.00) 7(TAGACGCC,+,0.00) -48(GGGCCGGCGCCG,-,0.00),-44(CGGCGCCGGCCC,+,0.00) -99(GGCGGGGG,+,0.00) -128(CGGCTCGA,-,0.00) -163(CCTCGCTA,+,0.00) -116(GCGGCGGCGGCG,+,0.00),-113(GCGGCGGCGGCG,+,0.00),-110(GCGGCGGCGGCG,+,0.00),-107(GCGGCGGCGGCG,+,0.00),-51(CCCGGGCCGGCG,+,0.00),-41(CGCCGGCCCCAC,-,0.00) 79(GCTGGGAAGG,+,0.00) 561_WT_peak_1120 chr10 102289356 102289653 + 84 NA intron (NM_001284368, intron 1 of 4) CpG 176 NM_001284367 4714 Hs.523215 NM_005004 HPRD:11886 NDUFB8 ASHI|CI-ASHI NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa protein-coding 0.074074 0.620805 -98(CTACCCGGAGGC,+,0.00) 18(AGCGGCAT,-,0.00) -117(TCAACGCC,+,0.00) 67(CCCCGGCCCT,+,0.00) 69(CCGGCCCTGGCC,+,0.00) 561_WT_peak_3943 chr2 677266 677783 + 84 NA promoter-TSS (NM_152834) promoter-TSS (NM_152834) -85 NM_152834 129787 Hs.43899 NM_152834 TMEM18 - transmembrane protein 18 protein-coding 0.075435 0.598456 182(GGAGCAGGCGGA,-,0.00),188(GGCGGAGGCGGG,-,0.00) 149(GGAGGCCGAG,+,0.00) -118(CGGGGAAA,+,0.00) 241(CCGCCACG,-,0.00) 561_WT_peak_3671 chr19 16482356 16482671 + 84 NA intron (NR_047665, intron 21 of 22) intron (NR_047665, intron 21 of 22) 46862 NM_016270 10365 Hs.744182 NM_016270 HPRD:03602 KLF2 LKLF Kruppel-like factor 2 protein-coding 0.047619 0.528481 37(AGCCGTTT,-,0.00) -58(CGCAGGGCCGCG,+,0.00) -54(GGGCCGCGCT,+,0.00) 561_WT_peak_1029 chr10 70847326 70847587 + 84 NA promoter-TSS (NR_036430) promoter-TSS (NR_036430) -372 NM_002727 5552 Hs.1908 NM_002727 HPRD:01513 SRGN PPG|PRG|PRG1 serglycin protein-coding 0.015326 0.381679 561_WT_peak_1647 chr12 32043695 32043926 + 84 NA Intergenic Intergenic -68543 NM_018169 55196 Hs.445129 NM_018169 HPRD:07691 KIAA1551 C12orf35 KIAA1551 protein-coding 0.000000 0.357759 -159(AGGTGTCT,+,0.00) -82(TTTACCAG,-,0.00) -105(GAGACAGGTAGC,+,0.00) 561_WT_peak_5631 chr4 160024239 160024409 + 84 NA Intergenic CpG -25633 NR_039963 100616303 NR_039963 MIR3688-2 - microRNA 3688-2 ncRNA 0.123529 0.730994 -59(GCTTTCGGCCCT,-,0.00) -49(CTCGGACGCC,-,0.00) -135(AGGAAGAGGCGG,+,0.00),-126(CGGAGGAAGAGG,+,0.00),-6(CCCCCTCTTCCC,-,0.00) -50(CCTCGGAC,+,0.00) -72(TGCGCGGC,-,0.00) 561_WT_peak_5170 chr3 98275379 98275455 + 84 NA Intergenic Intergenic 24674 NM_005290 2838 Hs.563128 NM_005290 HPRD:03102 GPR15 BOB G protein-coupled receptor 15 protein-coding 0.000000 0.363636 561_WT_peak_3427 chr18 9102083 9102343 + 84 NA promoter-TSS (NM_021074) promoter-TSS (NM_021074) -415 NM_021074 4729 Hs.464572 NM_021074 HPRD:02757 NDUFV2 CI-24k NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa protein-coding 0.019231 0.409962 -113(CCTCCCGCTCCC,-,0.00) 561_WT_peak_2849 chr16 56553589 56553975 + 84 NA 5' UTR (NM_031885, exon 1 of 17) 5' UTR (NM_031885, exon 1 of 17) 226 NM_031885 583 Hs.333738 NM_031885 HPRD:05855 BBS2 BBS Bardet-Biedl syndrome 2 protein-coding 0.098446 0.697674 39(GGAGGAGGGCTG,-,0.00) 128(AGCCGCCT,-,0.00) 141(CGGACGCG,-,0.00) 157(CGGGACGA,-,0.00) -160(GGCGCGGC,-,0.00),117(TGCGCGGC,-,0.00) -159(GCGCGGCCGGCG,+,0.00),120(GCGGCCCCAGCC,+,0.00) -25(GGGCTGATTT,+,0.00) 67(GCAGCGGAGC,+,0.00),193(GCGGCGGCGC,+,0.00) 561_WT_peak_7089 chr8 101844694 101844887 + 84 NA Intergenic HAL1|LINE|L1 -110475 NM_002568 26986 Hs.387804 NM_002568 HPRD:05247 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein, cytoplasmic 1 protein-coding 0.015544 0.402062 561_WT_peak_717 chr1 209941734 209942110 + 84 NA promoter-TSS (NM_001287754) promoter-TSS (NM_001287754) 89 NM_001287754 80342 Hs.147434 NM_025228 HPRD:16305 TRAF3IP3 T3JAM TRAF3 interacting protein 3 protein-coding 0.023936 0.538462 4(GGGCTGGTGCTT,-,0.00) 99(CGGCACCA,-,0.00) 155(CCCTCTGAGCCC,+,0.00) -124(CAAAAACG,+,0.00) 164(CCCTCGGCTCCC,-,0.00) 561_WT_peak_4549 chr20 3748574 3748885 + 84 NA promoter-TSS (NM_001039140) promoter-TSS (NM_001039140) -277 NM_001258430 54976 Hs.274422 NM_017874 HPRD:16648 C20orf27 - chromosome 20 open reading frame 27 protein-coding 0.096463 0.689103 99(TCCACGCC,+,0.00) -155(GCCGGGCG,+,0.00) -46(CTCCTTCTTCCG,-,0.00) -101(CAGAACCG,+,0.00) -57(CCCCGCCCCCGC,-,0.00) 125(GGGCCGTGTT,+,0.00) 50(CGTCTCGG,+,0.00) 561_WT_peak_5983 chr5 149829411 149829606 + 84 NA promoter-TSS (NM_005617) promoter-TSS (NM_005617) -189 NM_001025071 6208 Hs.744846 NM_005617 HPRD:00562 RPS14 EMTB|S14 ribosomal protein S14 protein-coding 0.082051 0.566327 -56(AAGCGGCT,+,0.00),-55(AGCGGCTA,-,0.00) -3(CGTGGCTA,+,0.00) 561_WT_peak_5581 chr4 114486173 114486401 + 84 NA intron (NM_172114, intron 4 of 17) intron (NM_172114, intron 4 of 17) 196796 NM_172127 817 Hs.144114 NM_001221 HPRD:09653 CAMK2D CAMKD calcium/calmodulin-dependent protein kinase II delta protein-coding 0.000000 0.406114 561_WT_peak_7081 chr8 100905564 100905899 + 84 NA intron (NM_004374, intron 1 of 3) CpG 511 NM_004374 1345 Hs.351875 NM_004374 HPRD:00494 COX6C - cytochrome c oxidase subunit VIc protein-coding 0.086567 0.648810 125(GGGACCGGACTC,+,0.00) 10(AGAGGCCT,-,0.00) -80(TCGGTGGG,-,0.00) -70(CGTCGCAA,+,0.00) 561_WT_peak_2578 chr15 83478462 83478664 + 84 NA exon (NM_001080435, exon 1 of 10) exon (NM_001080435, exon 1 of 10) 183 NM_001080435 123720 Hs.377360 NM_001080435 ENSG00000156232 WHAMM WHDC1 WAS protein homolog associated with actin, golgi membranes and microtubules protein-coding 0.113861 0.729064 -3(ACCGCGCA,+,0.00) -1(CGCGCAGCAGCG,+,0.00),10(GGCGGCTGCGCG,-,0.00) 561_WT_peak_6597 chr7 12726566 12726999 + 84 NA promoter-TSS (NM_001195396) promoter-TSS (NM_001195396) -129 NM_001195396 10124 Hs.245540 NM_005738 HPRD:11987 ARL4A ARL4 ADP-ribosylation factor-like 4A protein-coding 0.106236 0.716590 -43(GGCGGCCGGG,+,0.00) 185(TTGACGCC,+,0.00),238(GGCGGCGA,-,0.00) 55(CGGCGGGCGCGC,-,0.00) 251(CCGCCCGA,+,0.00) -45(TGGGCGGC,-,0.00) 191(CCCTGGCTGCGC,-,0.00) -40(GGCCGGGGCGGC,-,0.00) 231(GCAGCCTGGCGG,+,0.00),232(CAGCCTGGCGGC,-,0.00) 561_WT_peak_1516 chr11 123324927 123325252 + 84 NA Intergenic Intergenic -71255 NM_020716 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B - GRAM domain containing 1B protein-coding 0.015385 0.478528 78(TAGTGCCG,+,0.00) 62(CGGTTTAG,-,0.00) 561_WT_peak_4347 chr2 161933976 161934500 + 84 NA Intergenic L2a|LINE|L2 -59228 NM_133484 10010 Hs.132257 NM_004180 HPRD:04870 TANK I-TRAF|ITRAF|TRAF2 TRAF family member-associated NFKB activator protein-coding 0.005725 0.417143 18(ATGTGGCT,+,0.00) 88(GGGTTTTG,-,0.00) 561_WT_peak_1763 chr12 69979296 69979566 + 84 NA promoter-TSS (NM_001198842) promoter-TSS (NM_001198842) -31 NM_001198842 10576 Hs.189772 NM_006431 HPRD:06895 CCT2 99D8.1|CCT-beta|CCTB|HEL-S-100n|PRO1633|TCP-1-beta chaperonin containing TCP1, subunit 2 (beta) protein-coding 0.070370 0.682657 -51(CCCCGGCCCT,+,0.00) -93(GCTTCCTCTGTC,-,0.00) -22(TGCGCGGG,-,0.00) -19(GCGGGGCGTGCG,+,0.00) 561_WT_peak_255 chr1 59248515 59248907 + 84 NA exon (NM_002228, exon 1 of 1) exon (NM_002228, exon 1 of 1) 1074 NM_002228 3725 Hs.696684 NM_002228 HPRD:01302 JUN AP-1|AP1|c-Jun jun proto-oncogene protein-coding 0.086735 0.628499 152(CCGCGCCCCCCG,+,0.00) -156(GCGACGCC,+,0.00),16(GGCGTTGA,-,0.00) -71(TGGGTCGG,-,0.00),-1(TCGGACGG,-,0.00) -132(CGTCGGGC,+,0.00) -99(CGCGGAGGTGCG,+,0.00) -114(GGTCCGAGTT,+,0.00) 561_WT_peak_299 chr1 84610809 84610940 + 84 NA intron (NM_182948, intron 1 of 9) intron (NM_182948, intron 1 of 9) 943 NM_182948 5567 Hs.487325 NM_002731 HPRD:01482 PRKACB PKA C-beta|PKACB protein kinase, cAMP-dependent, catalytic, beta protein-coding 0.000000 0.371212 561_WT_peak_5098 chr3 48700994 48701216 + 84 NA promoter-TSS (NM_001407) promoter-TSS (NM_001407) -96 NR_111921 102724368 Hs.663571 NR_111921 CELSR3-AS1 - CELSR3 antisense RNA 1 (head to head) ncRNA 0.090090 0.672646 -106(CGTCACGA,-,0.00),40(CGTCACGA,-,0.00) -134(CCGCTTCTTCGG,-,0.00) -129(TCTTCGGGTCCC,-,0.00) -142(TGCGGGCCCCGC,-,0.00) -151(CCCCATGGCTGC,-,0.00) 561_WT_peak_5955 chr5 139493571 139493762 + 84 NA promoter-TSS (NM_005859) promoter-TSS (NM_005859) -42 NM_005859 5813 Hs.443121 NM_005859 PURA PUR-ALPHA|PUR1|PURALPHA purine-rich element binding protein A protein-coding 0.125654 0.729167 -144(GTTACCGGGTCT,-,0.00) -38(GGCGGCTGAG,+,0.00) 8(GGCGCGGC,-,0.00) -62(GCGGAGCCGGGG,+,0.00),0(GCGGCGGCGGCG,+,0.00) -63(GGCGGAGCCGGG,+,0.00) 3(GCGGCGGCGC,+,0.00),14(GCAGCGGAGC,+,0.00) -95(GCTGACTGGCTG,+,0.00) 561_WT_peak_5140 chr3 58456958 58457381 + 84 NA Intergenic Intergenic -20654 NM_001128214 200845 Hs.13982 NM_153331 HPRD:13769 KCTD6 KCASH3 potassium channel tetramerization domain containing 6 protein-coding 0.007092 0.469340 -106(GGTTCCGGCTCA,-,0.00) 561_WT_peak_4459 chr2 208490270 208490530 + 84 NA promoter-TSS (NM_001127395) promoter-TSS (NM_001127395) -427 NM_001127395 151194 Hs.664764 NM_145280 HPRD:14090 METTL21A FAM119A|HCA557b|HSPA-KMT methyltransferase like 21A protein-coding 0.080769 0.628352 -162(CCCCCGCC,-,0.00),-100(GCCGCGGG,+,0.00) 5(GCTCCGCCGC,-,0.00) 561_WT_peak_4863 chr22 26879593 26880026 + 84 NA promoter-TSS (NM_022081) promoter-TSS (NM_022081) 20 NM_022081 89781 Hs.474436 NM_022081 HPRD:05983 HPS4 LE Hermansky-Pudlak syndrome 4 protein-coding 0.138568 0.758065 182(GGCGGAGGGAGG,-,0.00) -11(AGAGGCCT,-,0.00) 171(TCGACGGC,+,0.00) -161(GCCCGCCCCT,+,0.00) 60(ACGTGCCG,+,0.00),167(CGGCTCGA,-,0.00) -130(GCCGCCCA,+,0.00) 140(CGGCGGCTCCGC,-,0.00) 141(GGCGGCTCCGCG,-,0.00),165(CGCGGCTCGACG,-,0.00) -133(AGCGCCGCCC,-,0.00) 252(CGAGGCGG,+,0.00) 115(GCTGCGGCGC,+,0.00),161(GCTCCGCGGC,-,0.00) 561_WT_peak_1073 chr10 81107756 81108175 + 84 NA intron (NM_005729, intron 1 of 5) intron (NM_005729, intron 1 of 5) 745 NM_005729 10105 Hs.381072 NM_005729 HPRD:06839 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding 0.057279 0.673810 -142(CCGGGCACGAGG,-,0.00) 21(GCGGTCGG,-,0.00) -140(GGGCACGA,-,0.00) -4(GCTTCCTGGCTC,-,0.00) 5(CTCCGGCCCCGC,-,0.00),97(CTCAGGCCCCGG,-,0.00) -31(CGTGGCGG,+,0.00),140(CGAGTCGG,+,0.00) 561_WT_peak_2482 chr15 51200717 51200945 + 84 NA promoter-TSS (NM_001252127) promoter-TSS (NM_001252127) -38 NM_007347 23431 Hs.413366 NM_007347 HPRD:06258 AP4E1 CPSQ4|SPG51 adaptor-related protein complex 4, epsilon 1 subunit protein-coding 0.122807 0.628821 14(CGGGCCGGCAGC,+,0.00) 26(GGCGGCCGGG,+,0.00) -115(AGCGGCCT,-,0.00) -137(CTTACGCG,-,0.00) 42(GCCGGGCG,+,0.00) -158(CGTCGCGA,+,0.00) -10(AAAACAGGAAGT,+,0.00) 561_WT_peak_719 chr1 210547337 210547575 + 84 NA intron (NM_018194, intron 3 of 11) intron (NM_018194, intron 3 of 11) 44816 NM_001170580 55733 Hs.58650 NM_018194 HPRD:12041 HHAT MART2|SKI1|Skn hedgehog acyltransferase protein-coding 0.004202 0.338912 561_WT_peak_6498 chr6 142716952 142717159 + 84 NA intron (NM_001032394, intron 8 of 24) intron (NM_001032394, intron 8 of 24) 93999 NM_001032395 57211 Hs.743302 NM_020455 HPRD:17059 GPR126 APG1|DREG|PS1TP2|VIGR G protein-coupled receptor 126 protein-coding 0.000000 0.317308 561_WT_peak_3973 chr2 15731621 15731887 + 84 NA promoter-TSS (NM_004939) promoter-TSS (NM_004939) 9 NM_004939 1653 Hs.440599 NM_004939 HPRD:03158 DDX1 DBP-RB|UKVH5d DEAD (Asp-Glu-Ala-Asp) box helicase 1 protein-coding 0.041353 0.599251 -144(CTCTCCGGGTCA,-,0.00) 49(GGCGTCCA,-,0.00) -93(GGACTGAGTGGG,-,0.00) 561_WT_peak_5521 chr4 83351411 83351713 + 84 NA promoter-TSS (NM_001207000) promoter-TSS (NM_001207000) -71 NM_021204 58478 Hs.18442 NM_021204 HPRD:17467 ENOPH1 E1|MASA|MST145|mtnC enolase-phosphatase 1 protein-coding 0.112583 0.693069 -123(GCGGGGAGGGGG,-,0.00) 76(TCGAGGCC,+,0.00) 23(CGCGTTCG,+,0.00) -125(GGGCGGGGAGGG,-,0.00),115(CCCTCCCCGCCC,+,0.00) 561_WT_peak_2453 chr15 43802595 43802896 + 84 NA promoter-TSS (NM_005657) promoter-TSS (NM_005657) -38 NM_005657 7158 Hs.440968 NM_005657 HPRD:05569 TP53BP1 53BP1|p202 tumor protein p53 binding protein 1 protein-coding 0.046512 0.539735 124(GGCGCCGA,-,0.00) 113(AAGCTTCTTCCG,-,0.00) 25(AGGCAGAGAGGG,-,0.00) -151(ACTGCGCA,+,0.00),-149(TGCGCAGC,-,0.00) 561_WT_peak_4734 chr20 62918518 62918834 + 84 NA Intergenic (TTAGGG)n|Simple_repeat|Simple_repeat -3062 NR_040415 140849 Hs.745565 NR_040415 LINC00266-1 C20orf69|NCRNA00266|NCRNA00266-1|bA476I15.3 long intergenic non-protein coding RNA 266-1 ncRNA 0.006329 0.504732 561_WT_peak_771 chr1 228748195 228748436 + 84 NA Intergenic CpG -32079 NR_037962 58480 Hs.647774 NM_021205 HPRD:06965 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding 0.078838 0.615702 50(GCCCGGCCCG,+,0.00) 49(AGCCCGGCCC,-,0.00) 25(GGCGCCTGGCTG,+,0.00),52(CCGGCCCGGCCG,+,0.00) 561_WT_peak_1056 chr10 75617223 75617446 + 84 NA intron (NM_172171, intron 3 of 20) MER5A1|DNA|hAT-Charlie 17015 NM_001222 818 Hs.523045 NM_001222 HPRD:03672 CAMK2G CAMK|CAMK-II|CAMKG calcium/calmodulin-dependent protein kinase II gamma protein-coding 0.017937 0.477679 32(CAGCACGA,-,0.00) 561_WT_peak_3362 chr17 76124983 76125327 + 84 NA promoter-TSS (NM_001127198) promoter-TSS (NM_001127198) -294 NM_001127198 11322 Hs.632227 NM_007267 HPRD:08386 TMC6 EV1|EVER1|EVIN1|LAK-4P transmembrane channel-like 6 protein-coding 0.037791 0.588406 57(CCCCCGCC,-,0.00),101(GGCGGGGG,+,0.00) 61(CGCCGCCCCCGC,-,0.00) 139(GGGCGGGGTT,+,0.00) 561_WT_peak_436 chr1 145129742 145130114 + 84 NA intron (NM_001277444, intron 20 of 24) intron (NM_001277444, intron 20 of 24) 33521 NM_004892 9554 Hs.632438 NM_004892 SEC22B ERS-24|SEC22L1 SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene) protein-coding 0.013441 0.498660 183(CAGCCTTCCCGG,+,0.00) -108(ACCTCTCAACCC,+,0.00) -22(CGGTTAAA,+,0.00) 561_WT_peak_4411 chr2 196521991 196522241 + 84 NA intron (NM_020342, intron 1 of 9) CpG 264 NM_020342 57181 Hs.650158 NM_020342 HPRD:10572 SLC39A10 LZT-Hs2 solute carrier family 39 (zinc transporter), member 10 protein-coding 0.108000 0.677291 -40(CCGGGGAGTCGG,-,0.00) -99(CGTGCGCG,-,0.00) -111(CAGAACCG,+,0.00),-45(CAGAACCG,+,0.00) -97(TGCGCGGC,-,0.00) -91(GCGGAGACTGCG,+,0.00) 73(CGCGGCTCCTCG,-,0.00) -109(GAACCGGCCC,-,0.00) 561_WT_peak_1315 chr11 62341141 62341343 + 83 NA intron (NM_001404, intron 1 of 9) CpG 218 NM_001404 1937 Hs.144835 NM_001404 HPRD:11745 EEF1G EF1G|GIG35 eukaryotic translation elongation factor 1 gamma protein-coding 0.039604 0.605911 1(AGCCGCCA,-,0.00) -78(GGCGCCGA,-,0.00) -161(TCCAGGCCCT,+,0.00) -59(CGGGCAAA,+,0.00) 2(GCCGCCATGGTG,+,0.00) 561_WT_peak_5383 chr4 467480 467920 + 83 NA intron (NM_133474, intron 1 of 2) CpG 298 NR_002451 79963 Hs.745030 NM_024903 ABCA11P ABCA11|EST1133530 ATP-binding cassette, sub-family A (ABC1), member 11, pseudogene pseudo 0.075000 0.657596 158(TAGCTACG,-,0.00) 74(CGGTTCTG,-,0.00) -61(GCTGGGCCAGAG,+,0.00),18(GCGGCGGCAGCG,+,0.00) 561_WT_peak_795 chr1 233734722 233735025 + 83 NA Intergenic Intergenic -14877 NM_002245 3775 Hs.208544 NM_002245 HPRD:03447 KCNK1 DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1 potassium channel, subfamily K, member 1 protein-coding 0.013201 0.355263 86(GTAACAGGAAGC,+,0.00) 561_WT_peak_6211 chr6 27740363 27740535 + 83 NA Intergenic Intergenic 10926 NR_038929 100131289 Hs.200573 NR_038929 LOC100131289 - uncharacterized LOC100131289 ncRNA 0.075581 0.647399 -147(GCTCCTTCCCCG,+,0.00) -86(GGGCCGCGTT,+,0.00) -55(GCCTGGCAGC,-,0.00) 561_WT_peak_1014 chr10 64893139 64893522 + 83 NA intron (NM_001282405, intron 1 of 2) CpG 323 NM_030759 29982 Hs.449628 NM_030759 HPRD:11401 NRBF2 COPR1|COPR2|NRBF-2 nuclear receptor binding factor 2 protein-coding 0.065274 0.669271 131(AGCCACTT,-,0.00) 15(CCCCGTCCCCGG,+,0.00) -155(TGCGTCGA,-,0.00) 80(AGGCTGTGAGGG,-,0.00) 188(CGCGGGGCCCCG,+,0.00) 8(AGCCCGGCCC,-,0.00) 561_WT_peak_1389 chr11 67232297 67232519 + 83 NA intron (NM_001078650, intron 4 of 5) CpG 4340 NR_073409 80194 Hs.288761 NM_025124 HPRD:08642 TMEM134 - transmembrane protein 134 protein-coding 0.072072 0.699552 -139(AGACACCT,-,0.00) -17(CCGGGAGGTGGG,-,0.00) -92(GGCTTCGA,-,0.00),-88(TCGAGGCC,+,0.00) -76(GGGCTGCCGCTG,-,0.00) -162(CGGCACGA,-,0.00) 561_WT_peak_5600 chr4 140374326 140374788 + 83 NA promoter-TSS (NM_031296) promoter-TSS (NM_031296) -404 NM_031296 83452 Hs.591679 NM_031296 HPRD:05808 RAB33B SMC2 RAB33B, member RAS oncogene family protein-coding 0.071429 0.615551 -4(GGCCTCGA,-,0.00) 23(TGGGCGGT,-,0.00) 561_WT_peak_3745 chr19 37406803 37407396 + 83 NA promoter-TSS (NM_001171979) promoter-TSS (NM_001171979) 94 NM_001037232 374899 Hs.720312 NM_001037232 ENSG00000185869 ZNF829 - zinc finger protein 829 protein-coding 0.075885 0.624579 90(AAACGGCT,+,0.00),314(AGGCGTCT,+,0.00) 176(CGGGGAACCCGG,-,0.00) 245(GCCGCGGG,+,0.00) 281(CGTCGCTG,+,0.00) 152(GCTGCGCA,+,0.00) 248(GCGGGGCCTGCT,+,0.00) 181(AACCCGGCCC,-,0.00) 245(GCCGCGGGGC,+,0.00) 561_WT_peak_992 chr10 52268086 52268314 + 83 NA intron (NM_147156, intron 3 of 10) MIRb|SINE|MIR 115537 NM_147156 259230 Hs.654698 NM_147156 HPRD:18203 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding 0.008772 0.458515 561_WT_peak_7260 chr9 37904046 37904590 + 83 NA promoter-TSS (NR_024873) promoter-TSS (NR_024873) 32 NR_024872 92014 Hs.634120 NM_033412 HPRD:14370 SLC25A51 CG7943|MCART1 solute carrier family 25, member 51 protein-coding 0.102941 0.667890 255(GCGCCTTCGCGG,+,0.00) 11(CCCGCGGC,-,0.00) 221(CGGTTTTA,-,0.00),239(CGGTTCTG,-,0.00) -103(CCCGCGCA,+,0.00) -109(CCGGGGCCCGCG,+,0.00),4(CCCTCGGCCCGC,-,0.00),246(GCGGGGCGAGCG,+,0.00) 234(CTTGTCGG,+,0.00),259(CTTCGCGG,+,0.00) 62(GCGGCGGGGC,+,0.00) 14(GCGGCCCGCCAG,+,0.00) 561_WT_peak_3925 chr19 58400134 58400408 + 83 NA 5' UTR (NM_001144989, exon 1 of 3) 5' UTR (NM_001144989, exon 1 of 3) 171 NM_001144989 730051 Hs.634143 NM_001144989 ZNF814 - zinc finger protein 814 protein-coding 0.065693 0.603636 -71(GGGCACGA,-,0.00) -147(AGCGTAGCCGCG,+,0.00) 561_WT_peak_4372 chr2 175458299 175458481 + 83 NA intron (NM_001077269, intron 1 of 7) intron (NM_001077269, intron 1 of 7) -35590 NR_125730 103625684 NR_125730 RNU6-2 U6-2 RNA, U6 small nuclear 2 snRNA 0.016484 0.360656 -48(TCATCCTGTTTC,-,0.00) 561_WT_peak_4081 chr2 61108128 61108159 + 83 NA promoter-TSS (NM_001291746) promoter-TSS (NM_001291746) 306 NR_033980 400957 Hs.170358 NR_033980 ENSG00000228414 LINC01185 - long intergenic non-protein coding RNA 1185 ncRNA 0.064516 0.687500 561_WT_peak_910 chr10 22610239 22610643 + 83 NA 5' UTR (NM_005180, exon 1 of 10) 5' UTR (NM_005180, exon 1 of 10) 302 NM_005180 648 Hs.380403 NM_005180 HPRD:01277 BMI1 FLVI2/BMI1|PCGF4|RNF51 BMI1 proto-oncogene, polycomb ring finger protein-coding 0.131188 0.701235 -81(GGAGGAGGAGGA,-,0.00),-78(GGAGGAGGAGGA,-,0.00),-36(GGCGGAGGCGGA,-,0.00),-27(GGAGGAGGAGGA,-,0.00),-21(GGAGGAGGCCGA,-,0.00),-3(GGAGGAGGCCGA,-,0.00),21(GGAGGAGGCCGG,-,0.00) -90(GGCGGCCGAG,+,0.00),-18(GGAGGCCGAG,+,0.00),0(GGAGGCCGAG,+,0.00),57(GGCGGCCGCG,+,0.00) -85(CCGAGGAGGAGG,-,0.00) 220(CGGGTACG,+,0.00) 40(CGGCATGA,-,0.00),201(TCGCGCCG,+,0.00) -152(TAAAACCG,+,0.00) 63(CGCGGCTGCTCG,-,0.00),71(CTCGGGGCCGCG,+,0.00) 75(GGGCCGCGCT,+,0.00) -39(CGAGGCGG,+,0.00),54(CGTGGCGG,+,0.00) 561_WT_peak_4837 chr22 20104806 20105019 + 83 NA promoter-TSS (NM_001257994) promoter-TSS (NM_001257994) -35 NM_001278640 5902 Hs.24763 NM_002882 HPRD:03110 RANBP1 HTF9A RAN binding protein 1 protein-coding 0.145540 0.705607 -82(CGGGCCGGGC,-,0.00) -68(GCCGCGGG,+,0.00) 10(TGGTTTTG,-,0.00) -105(TGCGCGCT,-,0.00) -44(GCGGGGCGGGCC,+,0.00) 561_WT_peak_6436 chr6 111302957 111303166 + 83 NA promoter-TSS (NM_032194) promoter-TSS (NM_032194) -159 NM_001289111 84154 Hs.372265 NM_032194 RPF2 BXDC1|bA397G5.4 ribosome production factor 2 homolog (S. cerevisiae) protein-coding 0.057416 0.552381 -63(CGCCCGGC,-,0.00) 561_WT_peak_1451 chr11 93394546 93394742 + 83 NA promoter-TSS (NM_033395) promoter-TSS (NM_033395) -172 NM_033395 85459 Hs.458418 NM_033395 ENSG00000166004 KIAA1731 - KIAA1731 protein-coding 0.102041 0.664975 15(CAGCCTTCCCGG,+,0.00) -44(AGGCTGGGGCTG,-,0.00),-38(GGGCTGGCGCGT,-,0.00) -19(CGCGTGCG,+,0.00),-17(CGTGCGCG,-,0.00) -94(CGGGAAAA,+,0.00) -150(CCTTGGCCTCCC,-,0.00) -15(TGCGCGGG,-,0.00),9(ACCGCGCA,+,0.00) -12(GCGGGGCGCGGG,+,0.00) -107(AGCGCGGCCC,-,0.00) -154(CCCGCCTTGGCC,+,0.00) 561_WT_peak_3755 chr19 38886280 38886526 + 83 NA exon (NM_001042522, exon 5 of 5) exon (NM_001042522, exon 5 of 5) 5471 NR_073032 399473 Hs.196011 NM_001039616 SPRED3 Eve-3|spred-3 sprouty-related, EVH1 domain containing 3 protein-coding 0.126016 0.773279 -31(CTCCCCGGAAGC,+,0.00) -68(CCCCCGGC,-,0.00) -125(CGGCACTA,-,0.00) 49(GCTGCGCA,+,0.00) 39(CGTGGCGG,+,0.00) 36(GGGCGTGGCGGC,-,0.00) 561_WT_peak_3488 chr18 36520859 36521116 + 83 NA Intergenic Intergenic -735698 NR_049847 100847025 NR_049847 miRBase:MI0019139 MIR5583-1 - microRNA 5583-1 ncRNA 0.007782 0.453488 561_WT_peak_2455 chr15 44580456 44580925 + 83 NA promoter-TSS (NM_138423) promoter-TSS (NM_138423) -219 NM_177974 113201 Hs.512867 NM_138423 HPRD:11018 CASC4 H63 cancer susceptibility candidate 4 protein-coding 0.059701 0.561702 203(GGTGTCGA,-,0.00) -55(CCTACGCG,-,0.00) -104(CCGACCCA,+,0.00) 286(CGGTTTTT,-,0.00) 293(TTTCCCCG,-,0.00) 258(GTGGGGCCAGGG,+,0.00) 238(GACCCGGCCC,-,0.00) 561_WT_peak_3118 chr17 31204423 31204665 + 83 NA promoter-TSS (NM_015194) promoter-TSS (NM_015194) -642 NM_015194 4642 Hs.602063 NM_015194 HPRD:07581 MYO1D PPP1R108|myr4 myosin ID protein-coding 0.024793 0.469136 -83(TCACCCTGCTCC,+,0.00) -72(CAAAACCC,+,0.00) 561_WT_peak_2385 chr14 103894253 103894445 + 83 NA intron (NM_001128921, intron 2 of 15) MER41B|LTR|ERV1 42648 NM_001128920 4140 Hs.35828 NM_002376 HPRD:04058 MARK3 CTAK1|KP78|PAR1A|Par-1a MAP/microtubule affinity-regulating kinase 3 protein-coding 0.005208 0.471503 -97(TTTACCCA,-,0.00) 561_WT_peak_22 chr1 2232465 2232694 + 83 NA intron (NM_003036, intron 1 of 6) CpG 51521 NR_024489 100129534 Hs.655313 NM_001127577 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo 0.074236 0.665217 -62(GCCGGGCG,+,0.00) -134(TTTCCCCG,-,0.00) -82(TAGACAGGAAGC,+,0.00) 561_WT_peak_5692 chr5 36242386 36242698 + 83 NA promoter-TSS (NM_153013) promoter-TSS (NM_153013) -161 NM_153013 133686 Hs.81907 NM_153013 HPRD:08088 NADK2 C5orf33|MNADK|NADKD1 NAD kinase 2, mitochondrial protein-coding 0.073718 0.670927 -93(GCGGGAAGGCAG,-,0.00) 73(TGGCACGA,-,0.00) 27(GGGCTGAGGAGG,-,0.00) 92(CGTGGGAC,+,0.00) -109(GGGTTTTG,-,0.00) -125(GCGGGGCCAGCG,+,0.00),104(TGCCCGCCCCGC,-,0.00) 15(GGGCCGGGCT,+,0.00) 109(GCCCCGCTGC,-,0.00) 14(GGGGCCGGGCTG,+,0.00) 561_WT_peak_2118 chr14 21458183 21458381 + 83 NA intron (NM_001029991, intron 1 of 12) intron (NM_001029991, intron 1 of 12) 317 NM_001029991 64745 Hs.512693 NM_022734 HPRD:13379 METTL17 METT11D1 methyltransferase like 17 protein-coding 0.040404 0.597990 -31(CAGCCCCCGCCC,+,0.00) -28(CCCCCGCC,-,0.00) -57(TCCGCGCA,+,0.00) 561_WT_peak_6813 chr7 106809415 106809650 + 83 NA promoter-TSS (NM_012257) promoter-TSS (NM_012257) 72 NM_012257 26959 Hs.162032 NM_012257 HPRD:13634 HBP1 - HMG-box transcription factor 1 protein-coding 0.093617 0.627119 -48(GGGGGAGGCCGA,-,0.00) -49(CGGGGGAGGCCG,-,0.00) -34(TCGGTCGG,-,0.00) -71(GCCGCGGG,+,0.00) -120(TGGCGACG,-,0.00) -32(GGTCGGAGAGGG,-,0.00) -42(GGCCGACG,-,0.00),-36(CGTCGGTC,+,0.00) -114(CGGGTTTG,-,0.00) 13(GGAGCGGCCC,-,0.00) 41(CTTCGCGG,+,0.00) 561_WT_peak_3557 chr19 1095412 1095629 + 83 NA promoter-TSS (NM_002695) promoter-TSS (NM_002695) -129 NM_002695 5434 Hs.24301 NM_002695 POLR2E RPABC1|RPB5|XAP4|hRPB25|hsRPB5 polymerase (RNA) II (DNA directed) polypeptide E, 25kDa protein-coding 0.096774 0.610092 -164(AACCCCGCCC,-,0.00) -115(CGTCTCGG,+,0.00) 561_WT_peak_3379 chr17 78785462 78785638 + 83 NA intron (NM_020761, intron 7 of 33) intron (NM_020761, intron 7 of 33) -6118 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA 0.022727 0.587571 561_WT_peak_1387 chr11 67055851 67056417 + 83 NA promoter-TSS (NM_207354) promoter-TSS (NM_207354) -628 NM_207354 338692 Hs.438673 NM_207354 HPRD:17349 ANKRD13D - ankyrin repeat domain 13 family, member D protein-coding 0.081272 0.694885 163(CCGCCTCCCCGC,+,0.00) -88(AGGGCCGGAA,-,0.00) 67(GCCGCGGG,+,0.00) 40(TCGTGCGG,+,0.00) 118(CCCTCTCTCCCC,+,0.00),221(CCCGCTCAGCCG,+,0.00) -131(CAAAACCA,+,0.00) 301(TTCACCCG,-,0.00) 177(CGCTGGGCCTGC,-,0.00) 561_WT_peak_5326 chr3 172304273 172304473 + 83 NA Intergenic Intergenic -63076 NM_001190942 8743 Hs.478275 NM_003810 HPRD:04670 TNFSF10 APO2L|Apo-2L|CD253|TL2|TRAIL tumor necrosis factor (ligand) superfamily, member 10 protein-coding 0.000000 0.328358 561_WT_peak_922 chr10 27149472 27149660 + 83 NA intron (NM_001178116, intron 1 of 11) CpG 450 NM_001012750 10006 Hs.508148 NM_005470 HPRD:04336 ABI1 ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 abl-interactor 1 protein-coding 0.085106 0.740741 -163(AGCCACTT,-,0.00) 10(CAGCGCCCGCCG,+,0.00) -138(CTCCCTCAGCCC,+,0.00) -159(ACTTCCTGTATC,-,0.00) -132(CAGCCCGGCCAC,-,0.00) 561_WT_peak_6777 chr7 100026130 100026423 + 83 NA promoter-TSS (NM_001194991) promoter-TSS (NM_001194991) -137 NM_001194992 56257 Hs.178011 NM_019606 HPRD:07889 MEPCE BCDIN3 methylphosphate capping enzyme protein-coding 0.078498 0.646259 -5(CCGGGAAAACGG,-,0.00) 5(GGCGTAGA,-,0.00) 54(CGGACCGA,+,0.00) -4(CGGGAAAA,+,0.00) 42(GGGGGCCCAGCG,+,0.00),64(CCCCGTCCCCGC,-,0.00) 101(CGTGGCGCCGCG,+,0.00),101(CGTGGCGCCGCG,-,0.00) -62(GCCGCCCTGTCC,+,0.00) 561_WT_peak_6681 chr7 63774411 63774695 + 83 NA intron (NM_001170905, intron 1 of 3) intron (NM_001170905, intron 1 of 3) 302 NM_001170905 728927 Hs.386162 NM_001170905 ENSG00000234444 ZNF736 - zinc finger protein 736 protein-coding 0.056338 0.582456 -77(GGAGGACGGCGG,-,0.00) 15(AACCGGCT,+,0.00) -12(GGGAAGAGGCTG,+,0.00) 561_WT_peak_145 chr1 28969745 28970014 + 83 NA promoter-TSS (NM_001135218) promoter-TSS (NM_001135218) -275 NM_005644 6883 Hs.530251 NM_005644 HPRD:15981 TAF12 TAF2J|TAFII20 TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa protein-coding 0.044610 0.503704 -38(TTGACGCC,+,0.00) -45(CGGGTAAT,+,0.00) 561_WT_peak_2036 chr13 47370975 47371253 + 83 NA intron (NM_001984, intron 1 of 9) CpG 253 NM_001984 2098 Hs.432491 NM_001984 HPRD:00588 ESD FGH esterase D protein-coding 0.093525 0.655914 -95(GGCTCCGGGTCA,-,0.00) 75(AGGCCTCT,+,0.00) -15(TCGTGCCT,+,0.00),41(CCGTGCCG,+,0.00) -83(CGGGAAAA,+,0.00),80(TCTACCCG,-,0.00) -154(CGCTCGCCCCGG,-,0.00) -98(CGAGGCTCCGGG,-,0.00) 561_WT_peak_3384 chr17 79398853 79399049 + 83 NA intron (NM_001291324, intron 1 of 27) HAL1-2a_MD|LINE|L1 19263 NR_036152 100422944 NR_036152 miRBase:MI0014229 MIR3186 - microRNA 3186 ncRNA 0.000000 0.548223 561_WT_peak_3476 chr18 29620961 29621182 + 83 NA intron (NM_017831, intron 2 of 5) intron (NM_017831, intron 2 of 5) 22626 NM_017831 54941 Hs.633703 NM_017831 HPRD:11500 RNF125 TRAC-1|TRAC1 ring finger protein 125, E3 ubiquitin protein ligase protein-coding 0.013575 0.405405 -82(TGGGTCGG,-,0.00) 561_WT_peak_6224 chr6 27806403 27806649 + 83 NA promoter-TSS (NM_003510) promoter-TSS (NM_003510) 86 NM_003520 8341 Hs.534368 NM_003520 HPRD:11899 HIST1H2BN H2B/d|H2BFD histone cluster 1, H2bn protein-coding 0.056911 0.558704 -11(CGTGTACG,+,0.00) -50(CGGCAAGA,-,0.00) -108(CCGCTCCTGCCC,-,0.00) 561_WT_peak_7449 chr9 131938239 131938536 + 83 NA 3' UTR (NM_203434, exon 1 of 1) 3' UTR (NM_203434, exon 1 of 1) 2153 NM_203434 389792 Hs.529857 NM_203434 HPRD:17128 IER5L bA247A12.2 immediate early response 5-like protein-coding 0.057239 0.587248 42(GGGGAGAAGAGG,+,0.00) -75(GTCCGCCG,-,0.00) -161(CCGGGGCCGCCG,+,0.00),-72(CGCCGTGCCCGC,-,0.00) 561_WT_peak_6988 chr8 41347730 41348013 + 83 NA promoter-TSS (NM_001174124) promoter-TSS (NM_001174124) -210 NM_016099 51125 Hs.654773 NM_016099 HPRD:13595 GOLGA7 GCP16|GOLGA3AP1|GOLGA7A|HSPC041 golgin A7 protein-coding 0.102473 0.697183 -67(TCGCGCCG,+,0.00) 22(CGGAAGGCGGGG,+,0.00) -86(CCCTCACACCCC,+,0.00) 83(AGCGCGCA,+,0.00) -70(CGCTCGCGCCGG,-,0.00),-22(AGCTCGCCCCGC,-,0.00),28(GCGGGGTCGGCC,+,0.00),38(CCCTGGCCCCGC,-,0.00) -94(AACTCCGCCC,-,0.00) 36(GGCCCTGGCCCC,-,0.00) 561_WT_peak_2159 chr14 31494827 31495342 + 83 NA promoter-TSS (NM_001254728) promoter-TSS (NM_001254728) 408 NM_007077 11154 Hs.293411 NM_007077 HPRD:06257 AP4S1 AP47B|CLA20|CLAPS4|CPSQ6|SPG52 adaptor-related protein complex 4, sigma 1 subunit protein-coding 0.087379 0.697674 13(CTCGGCCTCC,-,0.00) -35(AAGCCGTT,+,0.00) 54(CAGCCCCACCCC,+,0.00) 63(CCCCCGGC,-,0.00),243(GCCGCGGG,+,0.00),276(CCCCCGCC,-,0.00) 177(TCGTGCTG,+,0.00) 28(CGCCGGCTCCGG,-,0.00),245(CGCGGGACCCGC,-,0.00) -99(CCGCGTAG,-,0.00) 561_WT_peak_1328 chr11 63438861 63439169 + 83 NA 5' UTR (NM_015459, exon 1 of 13) 5' UTR (NM_015459, exon 1 of 13) 187 NM_015459 25923 Hs.356719 NM_015459 HPRD:13170 ATL3 HSN1F atlastin GTPase 3 protein-coding 0.139610 0.708738 23(CGCACGCG,-,0.00) -124(GCGGAGCCTGGG,+,0.00),-22(GCGTGGCGAGCG,+,0.00) -81(CGCGGAGCCGCG,+,0.00),-81(CGCGGAGCCGCG,-,0.00) -126(GGGCGGAGCC,+,0.00) -74(CCGCGACG,-,0.00),5(CGAGGCGG,+,0.00) 561_WT_peak_6331 chr6 43214927 43215120 + 83 NA intron (NM_032538, intron 2 of 14) intron (NM_032538, intron 2 of 14) 3801 NM_032538 84630 Hs.485436 NM_032538 HPRD:11653 TTBK1 BDTK tau tubulin kinase 1 protein-coding 0.077720 0.716495 -114(CCAGCCTCCTCC,+,0.00),7(TCAGCCTCCTCG,+,0.00) -41(CCTCCAGCCCGG,+,0.00) 561_WT_peak_2575 chr15 82824660 82825020 + 83 NA promoter-TSS (NR_111943) promoter-TSS (NR_111943) 25 NR_111943 6218 Hs.433427 NM_001021 HPRD:01600 RPS17 DBA4|RPS17L|RPS17L1|RPS17L2|S17 ribosomal protein S17 protein-coding 0.086111 0.675900 -22(GGAGGATGGCGG,-,0.00) 80(AAGCCGCT,+,0.00),81(AGCCGCTT,-,0.00) -91(GCGCCTTCCCGG,+,0.00) -12(GGCCTCGA,-,0.00) -85(TCCCGGCCCA,+,0.00) -153(GCCGGGCG,+,0.00),90(CGCCCGGC,-,0.00) 37(GAAACAGGAAGC,+,0.00) 152(GCGGGGGCGGCG,+,0.00) 114(CTACTCGG,+,0.00) 561_WT_peak_372 chr1 111214914 111215503 + 83 NA promoter-TSS (NR_109846) promoter-TSS (NR_109846) -811 NR_109846 3738 Hs.169948 NM_002232 HPRD:15937 KCNA3 HGK5|HLK3|HPCN3|HUKIII|KV1.3|MK3|PCN3 potassium voltage-gated channel, shaker-related subfamily, member 3 protein-coding 0.013582 0.366102 41(AGACACTT,-,0.00) 55(CCGGGAAAGGGG,-,0.00) 561_WT_peak_4880 chr22 30831613 30831954 + 83 NA Intergenic (CTG)n|Simple_repeat|Simple_repeat 10172 NM_001003704 51537 Hs.713636 NM_016498 HPRD:17612 MTFP1 MTP18 mitochondrial fission process 1 protein-coding 0.014663 0.611111 -28(GCTTCCTGCCTC,-,0.00) 561_WT_peak_5131 chr3 56759238 56759570 + 83 NA Intergenic Intergenic -42269 NM_001112736 23272 Hs.116877 NM_015224 HPRD:10183 FAM208A C3orf63|RAP140|se89-1 family with sequence similarity 208, member A protein-coding 0.009036 0.444444 561_WT_peak_3326 chr17 66292810 66293032 + 83 NA intron (NM_001267727, intron 1 of 11) intron (NM_001267727, intron 1 of 11) 5285 NM_001267727 22901 Hs.437249 NM_014960 ARSG - arylsulfatase G protein-coding 0.022523 0.457399 -149(AGCGGCCT,-,0.00) -85(CAAAACCA,+,0.00) 561_WT_peak_2527 chr15 67394712 67394869 + 83 NA intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) -23264 NM_001145102 4088 Hs.727986 NM_005902 HPRD:04380 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding 0.000000 0.405063 -109(AACCACTT,-,0.00) 561_WT_peak_7450 chr9 132175301 132175559 + 83 NA Intergenic Intergenic -75509 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 - long intergenic non-protein coding RNA 963 ncRNA 0.038760 0.548263 62(GTCACCGGGCCT,-,0.00) 561_WT_peak_1422 chr11 77706037 77706251 + 83 NA promoter-TSS (NM_033547) promoter-TSS (NM_033547) -427 NM_033547 92105 Hs.533723 NM_033547 HPRD:12386 INTS4 INT4|MST093 integrator complex subunit 4 protein-coding 0.032710 0.534884 -104(CAAAACCC,+,0.00) 561_WT_peak_2227 chr14 57046582 57046763 + 83 NA exon (NM_017799, exon 1 of 16) exon (NM_017799, exon 1 of 16) 161 NM_017799 54916 Hs.497253 NM_017799 HPRD:12624 TMEM260 C14orf101 transmembrane protein 260 protein-coding 0.110497 0.741758 -131(CTCGGTCGCC,-,0.00) -16(TCGCCGCC,+,0.00) -130(TCGGTCGC,-,0.00) -79(AGGGGCGGGC,-,0.00) -102(TGGCGACG,-,0.00) -27(CGTGGCGG,+,0.00) -109(GTCCCCATGGCG,+,0.00),-107(CCCCATGGCGAC,-,0.00),-14(GCCGCCGTGGCC,+,0.00),-12(CGCCGTGGCCGC,-,0.00) -57(GCTGCGGCGC,+,0.00) -31(GCGGCGTGGCGG,+,0.00) 561_WT_peak_3794 chr19 45582414 45582647 + 83 NA promoter-TSS (NM_024707) promoter-TSS (NM_024707) 0 NM_001007269 79760 Hs.466919 NM_024707 HPRD:07600 GEMIN7 SIP3 gem (nuclear organelle) associated protein 7 protein-coding 0.111588 0.739316 -107(CGGCCTGCCCGG,+,0.00),-5(CCCTCTCCCCGG,+,0.00) -101(GCCCGGGCCT,+,0.00) -140(GCGGCGCGGGCG,+,0.00),-125(CCCAGGCTCCGC,-,0.00),-83(GGGGCGCCGGCG,+,0.00) -124(CCAGGCTCCGCG,-,0.00) -143(GCGGCGGCGC,+,0.00),-120(GCTCCGCGGC,-,0.00) -108(GCGGCCTGCCCG,+,0.00) 561_WT_peak_3160 chr17 37910644 37910928 + 83 NA Intergenic CpG 14566 NM_001242443 2886 Hs.86859 NM_005310 HPRD:03311 GRB7 - growth factor receptor-bound protein 7 protein-coding 0.116197 0.747368 -110(GGAGGAGAGCGG,-,0.00) -37(GGCGCCCGAG,+,0.00) 7(AGGGCGGGGC,-,0.00) -14(TGCGCAGC,-,0.00) 93(GCGGGGGCAGCG,+,0.00) 561_WT_peak_5088 chr3 46037400 46037585 + 83 NA promoter-TSS (NM_024513) promoter-TSS (NM_024513) -176 NM_024513 79443 Hs.200227 NM_024513 HPRD:06215 FYCO1 CATC2|CTRCT18|RUFY3|ZFYVE7 FYVE and coiled-coil domain containing 1 protein-coding 0.064865 0.623656 -112(CGGACCGA,+,0.00) -125(ACCGCCCA,+,0.00) -146(GGGCGGGGTT,+,0.00) 561_WT_peak_272 chr1 66332108 66332397 + 83 NA intron (NM_002600, intron 1 of 16) intron (NM_002600, intron 1 of 16) -46676 NM_001297441 5142 Hs.198072 NM_002600 HPRD:02528 PDE4B DPDE4|PDEIVB phosphodiesterase 4B, cAMP-specific protein-coding 0.003460 0.317241 -101(AAGTGGTT,+,0.00) 561_WT_peak_4514 chr2 237994120 237994614 + 83 NA 5' UTR (NM_006710, exon 1 of 8) 5' UTR (NM_006710, exon 1 of 8) 283 NM_006710 10920 Hs.531713 NM_006710 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding 0.107287 0.618182 72(GGCGGCCGCG,+,0.00) 257(GCGACGCC,+,0.00) 177(GTCTGACG,-,0.00) 102(GCGGAGCCGGCC,+,0.00) 101(CGCGGAGCCGGC,+,0.00) 316(CCGCGAAG,-,0.00) -105(GGTGCGGAGC,+,0.00),303(GCGGCGAGGC,+,0.00) 561_WT_peak_5139 chr3 58419741 58419908 + 83 NA promoter-TSS (NR_033384) promoter-TSS (NR_033384) -245 NM_001173468 5162 Hs.161357 NM_000925 HPRD:01530 PDHB PDHBD|PDHE1-B|PHE1B pyruvate dehydrogenase (lipoamide) beta protein-coding 0.041916 0.559524 561_WT_peak_4888 chr22 31892467 31892879 + 83 NA intron (NM_001258326, intron 1 of 30) CpG 548 NM_001258327 9814 Hs.62209 NM_014775 HPRD:11550 SFI1 PISD|PPP1R139|hSfi1p Sfi1 homolog, spindle assembly associated (yeast) protein-coding 0.106796 0.673123 199(GGGCCCGGAGCC,+,0.00) -134(GGCGTCTA,-,0.00),-103(GGCGTGGA,-,0.00) 66(TCAGTCGG,-,0.00) 0(GCCCGGCCCT,+,0.00) 108(CCGCTTCCTCCC,-,0.00) 232(CTTCTCGG,+,0.00) 561_WT_peak_2576 chr15 82825114 82825198 + 83 NA promoter-TSS (NM_001021) promoter-TSS (NM_001021) -204 NR_111944 6218 Hs.433427 NM_001021 HPRD:01600 RPS17 DBA4|RPS17L|RPS17L1|RPS17L2|S17 ribosomal protein S17 protein-coding 0.095238 0.623529 -105(GCATCCGGTCCT,-,0.00) 561_WT_peak_6445 chr6 116574886 116575119 + 83 NA exon (NM_021648, exon 1 of 1) exon (NM_021648, exon 1 of 1) 259 NM_021648 23270 Hs.284141 NM_021648 HPRD:18236 TSPYL4 dJ486I3.2 TSPY-like 4 protein-coding 0.085837 0.675214 -152(CCTCCTGCCCGG,+,0.00) 32(TCGGTCCG,-,0.00) -143(CGGCTTTG,-,0.00) -93(GCGGGGCCACAG,+,0.00) 561_WT_peak_362 chr1 110091109 110091428 + 83 NA promoter-TSS (NM_006496) promoter-TSS (NM_006496) 82 NM_006496 2773 Hs.73799 NM_006496 GNAI3 87U6|ARCND1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 protein-coding 0.103448 0.631250 141(GGAGGACGGGGA,-,0.00) 35(GAGTCCGGGCCC,-,0.00) -96(GGCGTCGC,-,0.00) -73(CGTCGGAT,+,0.00) 147(CGGGGAAA,+,0.00) -43(GGGAGCTGACGG,+,0.00) -23(ACCGCCCA,+,0.00) 64(GCCGCCATGGGC,+,0.00) -103(GCTGCGGGGC,+,0.00) 5(CTGCCGAGCCGC,-,0.00) 561_WT_peak_5398 chr4 2538025 2538402 + 83 NA Intergenic CpG 67033 NM_001185009 6047 Hs.66394 NM_002938 HPRD:04167 RNF4 SLX5|SNURF ring finger protein 4 protein-coding 0.095491 0.719577 160(TCCCCCTCCCCC,+,0.00) 141(CCCCCTCCCCGC,+,0.00),161(CCCCCTCCCCCG,+,0.00) -136(GGCGACGA,-,0.00) 87(GCCGGGGG,+,0.00) 50(CGGCAGGA,-,0.00) 152(CTGCTCCTTCCC,-,0.00) -156(GCGGCGCGGGCG,+,0.00),-147(GCGGGACCTGCG,+,0.00),-96(CCCTGGCCCCAG,-,0.00) -127(CGAGGCGG,+,0.00) 561_WT_peak_2610 chr15 91498202 91498410 + 83 NA TTS (NM_018671) TTS (NM_018671) 200 NM_033544 91433 Hs.655895 NM_033544 HPRD:18706 RCCD1 - RCC1 domain containing 1 protein-coding 0.052885 0.617225 -96(GAGCTCCAGCCC,+,0.00) -71(AGGGGCGGGA,-,0.00) -37(GTCCAACG,-,0.00),-5(GTCCAACG,-,0.00) 561_WT_peak_6429 chr6 109242820 109243031 + 83 NA intron (NM_032131, intron 10 of 17) intron (NM_032131, intron 10 of 17) 2381 NR_104137 101929716 NR_104137 ARMC2-AS1 - ARMC2 antisense RNA 1 ncRNA 0.009479 0.415094 -50(TAGTGGCT,+,0.00),-7(TGGCGGCT,+,0.00) -147(TGGTTTTG,-,0.00) 561_WT_peak_2231 chr14 58711638 58711874 + 83 NA intron (NR_038123, intron 1 of 9) CpG 233 NM_152132 5684 Hs.558799 NM_002788 HPRD:01463 PSMA3 HC8|PSC3 proteasome (prosome, macropain) subunit, alpha type, 3 protein-coding 0.059322 0.569620 -130(TCTGTCGG,-,0.00) -63(CGCGGACCCGGG,+,0.00) 561_WT_peak_4467 chr2 217277054 217277278 + 83 NA promoter-TSS (NM_001127207) promoter-TSS (NM_001127207) 29 NM_014140 50485 Hs.516674 NM_014140 HPRD:05969 SMARCAL1 HARP|HHARP SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 protein-coding 0.084821 0.591111 -139(TCCCGGCCCG,+,0.00) -136(CGGCCCGA,-,0.00) -53(CGGCCGCGTT,+,0.00) 561_WT_peak_1142 chr10 111985523 111985704 + 83 NA promoter-TSS (NM_005962) promoter-TSS (NM_005962) -149 NM_005962 4601 Hs.602078 NM_005962 HPRD:02486 MXI1 MAD2|MXD2|MXI|bHLHc11 MAX interactor 1, dimerization protein protein-coding 0.088398 0.631868 3(AGGGGCGGGA,-,0.00) -40(GCCGCGGG,+,0.00) -111(TTCCGACG,-,0.00) 561_WT_peak_5077 chr3 43732375 43732690 + 83 NA intron (NM_016006, intron 1 of 6) CpG 157 NM_016006 51099 Hs.19385 NM_016006 ABHD5 CDS|CGI58|IECN2|NCIE2 abhydrolase domain containing 5 protein-coding 0.146032 0.753165 -46(GGAGGAGGAGGA,-,0.00),-40(GGAGGAGGTGGA,-,0.00) 22(GTCTCCGGCGCG,-,0.00) -117(GGCGGCCCAG,+,0.00),-52(GGCGGCGGAG,+,0.00) -93(GGCTTCGA,-,0.00),82(TCGCCGCC,+,0.00),95(GGCGACGA,-,0.00) -131(CCGCGCCAGCCC,+,0.00) 126(CGGCATGA,-,0.00) 94(TGGCGACG,-,0.00) 13(GCTTCGTGTGTC,-,0.00) -132(GCCGCGCC,+,0.00),-69(TGCGCGGC,-,0.00) 46(GGGCCGGGTT,+,0.00),104(GGGCGGCTTC,+,0.00) -58(GGCTATGGCGGC,-,0.00) 561_WT_peak_2746 chr16 26609418 26609836 + 82 NA Intergenic Intergenic -468592 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding 0.009569 0.460621 176(AAGCCTCT,+,0.00) 63(CAAAACTG,+,0.00) 561_WT_peak_4854 chr22 24038343 24038743 + 82 NA intron (NR_024448, intron 7 of 11) intron (NR_024448, intron 7 of 11) 5495 NM_153615 266747 Hs.658997 NM_153615 HPRD:11528 RGL4 Rgr ral guanine nucleotide dissociation stimulator-like 4 protein-coding 0.022500 0.578554 120(AGGCCCGGCTGC,+,0.00) 191(AGGTGGCT,+,0.00) -13(TCGTGCCT,+,0.00) 119(GAGGCCCGGCTG,+,0.00),224(GCGGGGTGGCTG,+,0.00) 561_WT_peak_6300 chr6 34393646 34393816 + 82 NA promoter-TSS (NM_001203245) promoter-TSS (NM_001203245) 87 NM_001203245 6204 Hs.406620 NM_001014 HPRD:04697 RPS10 DBA9|S10 ribosomal protein S10 protein-coding 0.058824 0.614035 -66(AGCCGCTA,-,0.00) -64(CCGCTAAGGCGG,-,0.00) -55(CGGCAGGA,-,0.00) -76(GGGGAGAAGCAG,+,0.00) -37(GGGAGCCGATGG,+,0.00) 561_WT_peak_6450 chr6 116989850 116989996 + 82 NA promoter-TSS (NM_145062) promoter-TSS (NM_145062) 50 NM_145062 221302 Hs.29857 NM_145062 HPRD:12840 ZUFSP C6orf113|dJ412I7.3 zinc finger with UFM1-specific peptidase domain protein-coding 0.047945 0.489796 -33(TCCACGCC,+,0.00) -39(CGCCGCTCCACG,-,0.00) 561_WT_peak_2109 chr13 114913941 114914278 + 82 NA Intergenic Intergenic -16014 NM_007368 22821 Hs.593075 NM_007368 HPRD:05537 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding 0.023739 0.497041 16(CCATCGCAGCCC,+,0.00) -57(GGCGCCACGGCT,+,0.00) 561_WT_peak_863 chr10 6092909 6093266 + 82 NA intron (NM_000417, intron 1 of 7) intron (NM_000417, intron 1 of 7) 11246 NM_000417 3559 Hs.231367 NM_000417 HPRD:00986 IL2RA CD25|IDDM10|IL2R|TCGFR|p55 interleukin 2 receptor, alpha protein-coding 0.022409 0.497207 61(AGGACCGGAAGC,+,0.00) -107(CGTCAGAC,+,0.00) 561_WT_peak_4595 chr20 30102290 30102465 + 82 NA exon (NM_030789, exon 1 of 12) exon (NM_030789, exon 1 of 12) 164 NM_178582 81502 Hs.373741 NM_030789 HPRD:06166 HM13 H13|IMP1|IMPAS|IMPAS-1|MSTP086|PSENL3|PSL3|SPP|SPPL1|dJ324O17.1 histocompatibility (minor) 13 protein-coding 0.120000 0.704545 -32(CGCGGCCGCC,-,0.00) -21(TCCACGCC,+,0.00) -96(GACTCGGCCC,-,0.00) -35(CTACGCGG,+,0.00) -105(CTCGCCATGGAC,+,0.00) 561_WT_peak_3907 chr19 56826127 56826467 + 82 NA Intergenic CpG -53171 NR_003127 147947 Hs.467326 NM_194319 HPRD:15828 ZNF542P ZNF542 zinc finger protein 542, pseudogene pseudo 0.058824 0.560117 -52(GGATCCGGGGCG,-,0.00) 10(AAGCCTCT,+,0.00),84(AAGCGTTT,+,0.00) -29(TCCCAGCCCT,+,0.00) -44(GGCGGGGG,+,0.00) -135(GTGGGGCCGGGG,+,0.00) 561_WT_peak_5359 chr3 188156928 188157102 + 82 NA intron (NM_001167671, intron 3 of 10) intron (NM_001167671, intron 3 of 10) 129439 NR_046623 100873917 Hs.674993 NR_046623 LPP-AS1 - LPP antisense RNA 1 ncRNA 0.011494 0.422857 -136(AGCCACCT,-,0.00) 561_WT_peak_3787 chr19 44258885 44259095 + 82 NA 5' UTR (NM_019108, exon 1 of 14) 5' UTR (NM_019108, exon 1 of 14) 152 NM_019108 56006 Hs.466875 NM_019108 HPRD:07800 SMG9 C19orf61|F17127_1 SMG9 nonsense mediated mRNA decay factor protein-coding 0.076190 0.644550 -37(AGGAAGAAGAGG,+,0.00) -88(CGAAACCG,+,0.00) -15(AACGCGGGCC,-,0.00) 561_WT_peak_1895 chr12 122017806 122017951 + 82 NA intron (NM_032590, intron 1 of 22) intron (NM_032590, intron 1 of 22) 486 NM_001005366 84678 Hs.524800 NM_032590 HPRD:12362 KDM2B CXXC2|FBXL10|Fbl10|JHDM1B|PCCX2 lysine (K)-specific demethylase 2B protein-coding 0.006897 0.308219 561_WT_peak_4588 chr20 25604732 25605171 + 82 NA promoter-TSS (NM_152667) promoter-TSS (NM_152667) -303 NM_152667 140838 Hs.143137 NM_152667 HPRD:17097 NANP C20orf147|HDHD4|dJ694B14.3 N-acetylneuraminic acid phosphatase protein-coding 0.102506 0.677273 97(CCGGGCGGGCGG,-,0.00),217(GCGCCTTCCCGC,+,0.00) -92(TCGGCGCC,+,0.00) 166(TGTACGCG,-,0.00) 96(GCCGGGCG,+,0.00) 18(CGGCGCGA,-,0.00) -44(GTCCGAAG,-,0.00) 96(GCCGGGCGGGCG,+,0.00) 225(CCGCCTCG,-,0.00) 62(GCTGCCAGGC,+,0.00) 561_WT_peak_2447 chr15 42565381 42565569 + 82 NA promoter-TSS (NM_198141) promoter-TSS (NM_198141) 307 NM_001286487 25963 Hs.511138 NM_015497 ENSG00000103978 TMEM87A - transmembrane protein 87A protein-coding 0.069149 0.582011 -46(GTTGCCGGTCCC,-,0.00) -65(CCGGTCGG,-,0.00) 561_WT_peak_3964 chr2 10829893 10830378 + 82 NA promoter-TSS (NM_001261394) promoter-TSS (NM_001261394) -22 NR_048552 79954 Hs.222494 NM_024894 HPRD:07849 NOL10 PQBP5 nucleolar protein 10 protein-coding 0.084536 0.635802 -17(AGCACCGTAATC,+,0.00) 120(GGCGGCCGGG,+,0.00) 97(AGGTGGCT,+,0.00) 35(GGCGCCGA,-,0.00) 39(CCGACTGA,+,0.00) -155(GGGGCCGGGA,-,0.00) 202(GCCGGGCG,+,0.00) 311(CGTCTCTA,+,0.00) 206(GGCGCGGT,-,0.00) 31(CGCTGGCGCCGA,-,0.00) 10(CCCTGCTCCGCG,-,0.00) 14(GCTCCGCGGC,-,0.00) 156(CCGGCGTGGCTG,+,0.00) 561_WT_peak_311 chr1 89458061 89458365 + 82 NA intron (NM_001162536, intron 1 of 2) CpG 430 NM_019610 494115 Hs.481898 NM_019610 HPRD:17417 RBMXL1 RBM1 RNA binding motif protein, X-linked-like 1 protein-coding 0.125000 0.740984 -138(TCGGCGCC,+,0.00) 24(GCGCGCCCGCCC,+,0.00) -29(CCCGTACG,+,0.00),-27(CGTACGCC,-,0.00),116(CGGACGCG,-,0.00) -61(CGGCAAGA,-,0.00) 11(GCCGCGCC,+,0.00),16(GCCGCGCC,+,0.00) 10(CGCCGCGCCGCG,+,0.00),10(CGCCGCGCCGCG,-,0.00),15(CGCCGCGCCGCG,+,0.00),15(CGCCGCGCCGCG,-,0.00),127(GGCGGAGCCGGG,+,0.00) 126(GGGCGGAGCC,+,0.00) -76(GCCCCGCAGC,-,0.00) 561_WT_peak_2747 chr16 27181013 27181437 + 82 NA Intergenic MLT1N2|LTR|ERVL-MaLR -33582 NM_024773 79831 Hs.145717 NM_024773 HPRD:07836 KDM8 JMJD5 lysine (K)-specific demethylase 8 protein-coding 0.009434 0.470588 561_WT_peak_4802 chr21 40817778 40818025 + 82 NA intron (NM_001001713, intron 1 of 6) CpG 104 NM_001001713 6450 Hs.473847 NM_007341 HPRD:03753 SH3BGR 21-GARP SH3 domain binding glutamate-rich protein protein-coding 0.089069 0.633065 -22(CTGCCTTCCCGC,+,0.00) -37(TCGGCGCC,+,0.00) -52(TCCTGCCG,+,0.00) -1(CCGAGACG,-,0.00) 561_WT_peak_7048 chr8 67974732 67974943 + 82 NA promoter-TSS (NM_006837) promoter-TSS (NM_006837) -275 NM_006837 10987 Hs.491912 NM_006837 HPRD:06888 COPS5 CSN5|JAB1|MOV-34|SGN5 COP9 signalosome subunit 5 protein-coding 0.033175 0.452830 561_WT_peak_1098 chr10 94050889 94051296 + 82 NA promoter-TSS (NM_014912) promoter-TSS (NM_014912) 172 NM_017824 54708 Hs.573490 NM_017824 HPRD:07909 MARCH5 MARCH-V|MITOL|RNF153 membrane-associated ring finger (C3HC4) 5 protein-coding 0.122850 0.725490 -4(TCGCTCTCCGCC,+,0.00) -78(TGGACCGGAACC,+,0.00),-50(GAACCCGGGCCG,-,0.00) 1(CTCCGCCGCC,-,0.00),113(CTCCGCCGCC,-,0.00) -32(CCGCCTCCCCGC,+,0.00),65(CCGGGAAGCTGG,-,0.00) -142(GGCGGCGA,-,0.00),-95(TCGGCGCC,+,0.00),-35(TCGCCGCC,+,0.00) -152(CGCGCACG,+,0.00) -61(CCGACGGA,+,0.00) -66(TCGGGCCG,+,0.00) 193(CGGAAGATGCCG,+,0.00) -63(GGCCGACG,-,0.00),-60(CGACGGAC,+,0.00),13(CGCCGGAC,+,0.00),96(CGCCGGAC,+,0.00) 24(CGCAGGCCCTGC,-,0.00),182(CGCCGGCTCCGC,-,0.00) 183(GCCGGCTCCGCG,-,0.00) -98(AACTCGGCGC,-,0.00),-44(GGGCCGCGAT,+,0.00) 561_WT_peak_1898 chr12 122232190 122232362 + 82 NA promoter-TSS (NM_019034) promoter-TSS (NM_019034) -682 NM_019034 54509 Hs.644504 NM_019034 HPRD:15246 RHOF ARHF|RIF ras homolog family member F (in filopodia) protein-coding 0.122093 0.728324 -65(TGGCCCGAAACC,+,0.00) -92(TCGGCGCC,+,0.00) -31(CGGCAGGA,-,0.00) -121(CGTCTGAC,+,0.00),-120(GTCTGACG,-,0.00) -156(CTTACCCG,-,0.00) 561_WT_peak_1509 chr11 120215064 120215277 + 82 NA intron (NM_015313, intron 1 of 40) intron (NM_015313, intron 1 of 40) 7552 NM_001198665 23365 Hs.24598 NM_015313 HPRD:09207 ARHGEF12 LARG|PRO2792 Rho guanine nucleotide exchange factor (GEF) 12 protein-coding 0.004695 0.429907 18(AAGTGGTT,+,0.00) 561_WT_peak_1766 chr12 72057069 72057347 + 82 NA promoter-TSS (NM_031435) promoter-TSS (NM_031435) -469 NM_031435 83591 Hs.245798 NM_031435 HPRD:10896 THAP2 - THAP domain containing, apoptosis associated protein 2 protein-coding 0.093525 0.637993 -161(TGGGTCGG,-,0.00) -117(GCGTGCCG,+,0.00) 97(CCCCTTCTTCCT,-,0.00) -135(AGGTGGCCCCGC,-,0.00) -26(GGGCCGAGTG,+,0.00) -10(CCTTCGCCGC,-,0.00) 561_WT_peak_1810 chr12 95611584 95611938 + 82 NA promoter-TSS (NM_018351) promoter-TSS (NM_018351) 239 NM_017599 55591 Hs.24135 NM_017599 HPRD:11671 VEZT VEZATIN vezatin, adherens junctions transmembrane protein protein-coding 0.081921 0.622535 26(GGCCTCGA,-,0.00),70(TCGTCGCC,+,0.00) 169(GGGCTGGAGCGG,-,0.00) -153(TCGTGCTG,+,0.00) 65(GTCCGTCG,-,0.00) -7(CCGGGGCGAGGG,+,0.00) 95(GGCGCCCTGGCC,+,0.00) 96(GCGCCCTGGCCG,+,0.00) 561_WT_peak_1392 chr11 67396814 67397205 + 82 NA intron (NM_181843, intron 1 of 2) CpG 399 NM_001243750 254552 Hs.433329 NM_181843 HPRD:17652 NUDT8 - nudix (nucleoside diphosphate linked moiety X)-type motif 8 protein-coding 0.107417 0.693878 -38(CGTGCGCG,-,0.00),-24(CGCGTACG,+,0.00),-22(CGTACGAG,-,0.00) 31(CCGACGGA,+,0.00) -50(TCCCGGCCCA,+,0.00) -132(GCCGGGCG,+,0.00) 149(CCCTGCCAGCCC,+,0.00) 29(GGCCGACG,-,0.00),32(CGACGGAC,+,0.00) -93(GGGCGGCGTC,+,0.00) 561_WT_peak_1664 chr12 46608865 46609067 + 82 NA intron (NM_001278387, intron 6 of 17) intron (NM_001278387, intron 6 of 17) 51312 NM_001278389 81539 Hs.533770 NM_030674 HPRD:12245 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38, member 1 protein-coding 0.009901 0.536946 -119(CAAAACTG,+,0.00) -71(TCTTTCTGTTTC,-,0.00) 561_WT_peak_7394 chr9 114936718 114937145 + 82 NA intron (NM_001282640, intron 1 of 17) intron (NM_001282640, intron 1 of 17) 646 NM_022486 64420 Hs.494827 NM_022486 HPRD:15452 SUSD1 - sushi domain containing 1 protein-coding 0.063232 0.558411 56(GCATCCGGCTCT,-,0.00),142(AGAGCCGGAAGC,+,0.00) 30(CTTACGCG,-,0.00) 181(TCCCCGCCCT,+,0.00) 109(CGGGTCAA,+,0.00) 193(CCCGGGCGCCGC,-,0.00) 209(CCCGGGTCCGCG,-,0.00) 197(GGCGCCGCCC,-,0.00) 200(GCCGCCCTGCCC,+,0.00) 561_WT_peak_3584 chr19 4124191 4124379 + 82 NA promoter-TSS (NM_030662) promoter-TSS (NM_030662) -159 NM_030662 5605 Hs.465627 NM_030662 HPRD:03164 MAP2K2 CFC4|MAPKK2|MEK2|MKK2|PRKMK2 mitogen-activated protein kinase kinase 2 protein-coding 0.117021 0.735450 -94(GACCGACG,-,0.00) -146(GCCGCGCC,+,0.00),-138(TGCGCAGC,-,0.00) -86(CGAGGCGG,+,0.00) 561_WT_peak_1832 chr12 104359710 104359977 + 82 NA intron (NM_003211, intron 1 of 9) CpG 250 NM_003211 6996 Hs.584809 NM_003211 HPRD:03251 TDG hTDG thymine-DNA glycosylase protein-coding 0.116105 0.701493 -72(AGCGGCCT,-,0.00) -104(CCGTGTGCCCGG,+,0.00) 19(TGGCTGGCGCGC,-,0.00) 34(CGCGCACG,+,0.00),86(CGCGTGCG,+,0.00) -29(CCGGGGCCAGCG,+,0.00) -21(AGCGCCGCCC,-,0.00) 13(GCAGGCTGGCTG,+,0.00) 561_WT_peak_734 chr1 221886536 221886743 + 82 NA intron (NR_111940, intron 1 of 2) intron (NR_111940, intron 1 of 2) 23603 NR_111939 11221 Hs.497822 NM_007207 HPRD:12320 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding 0.009662 0.500000 -61(CGGAGGAAGTGG,+,0.00) 561_WT_peak_2037 chr13 48612067 48612350 + 82 NA intron (NM_018283, intron 1 of 2) CpG 505 NM_018283 55270 Hs.144407 NM_018283 HPRD:14848 NUDT15 MTH2 nudix (nucleoside diphosphate linked moiety X)-type motif 15 protein-coding 0.095406 0.633803 -103(CGTCCGCG,-,0.00) 561_WT_peak_7327 chr9 88897696 88897994 + 82 NA promoter-TSS (NM_030940) promoter-TSS (NM_030940) -355 NM_030940 81689 Hs.449291 NM_030940 HPRD:17091 ISCA1 HBLD2|ISA1|hIscA iron-sulfur cluster assembly 1 protein-coding 0.053691 0.548495 44(TCGTTCCG,+,0.00) 561_WT_peak_2741 chr16 24551082 24551571 + 82 NA 5' UTR (NM_006910, exon 1 of 18) 5' UTR (NM_006910, exon 1 of 18) 418 NM_032626 5930 Hs.188553 NM_006910 HPRD:02964 RBBP6 MY038|P2P-R|PACT|RBQ-1|SNAMA retinoblastoma binding protein 6 protein-coding 0.120654 0.757143 207(GACTCCGGGCCT,-,0.00) -88(CCCGGCCGCC,-,0.00) 40(AGGCCTCT,+,0.00),195(AGGCCGCT,+,0.00) 7(GGGGGGAGGCGG,-,0.00),99(CCGGGGAGCAGG,-,0.00) -79(CGGCTGGGGCCC,-,0.00) 54(CCGACCGC,+,0.00) 4(GGCGGGGG,+,0.00),20(GCCGGGGG,+,0.00) 285(CGGGAGGTGCGG,+,0.00) -29(TAGCGCCG,-,0.00) -102(GTCCGCCG,-,0.00),-14(GTCCGAGG,-,0.00) -23(CGGCTTTG,-,0.00) -7(GCGGCGGCGGCG,+,0.00),-4(GCGGCGGCGGCG,+,0.00),15(GCGGAGCCGGGG,+,0.00),243(CCGGGGCCTGGG,+,0.00) 14(GGCGGAGCCGGG,+,0.00) -11(CGAGGCGG,+,0.00) 27(GCGGCCTGCGGG,+,0.00),245(GGGGCCTGGGTC,+,0.00) 561_WT_peak_3265 chr17 56413185 56413466 + 82 NA promoter-TSS (NR_039889) promoter-TSS (NR_039889) 58 NR_039889 100616220 NR_039889 miRBase:MI0017373 MIR4736 - microRNA 4736 ncRNA 0.007117 0.539007 78(CAAACAGGAAGT,+,0.00) 104(AGACCCGCCC,-,0.00) 561_WT_peak_1301 chr11 59578172 59578459 + 82 NA promoter-TSS (NM_017840) promoter-TSS (NM_017840) 30 NM_017840 54948 Hs.530734 NM_017840 HPRD:14743 MRPL16 L16mt|MRP-L16 mitochondrial ribosomal protein L16 protein-coding 0.080139 0.645833 -113(AATCGGCT,+,0.00) -47(CCGACGGA,+,0.00) -25(GAGCGACG,-,0.00) 110(GCGGCGGGGC,+,0.00) 561_WT_peak_2905 chr16 74528057 74528286 + 82 NA intron (NR_027264, intron 6 of 26) intron (NR_027264, intron 6 of 26) -72803 NM_001011880 497190 Hs.454670 NM_001011880 HPRD:17419 CLEC18B MRCL2 C-type lectin domain family 18, member B protein-coding 0.013100 0.352174 561_WT_peak_4851 chr22 21983794 21984037 + 82 NA exon (NM_001017964, exon 2 of 5) exon (NM_001017964, exon 2 of 5) 425 NM_001017964 150223 Hs.355952 NM_001017964 HPRD:18559 YDJC - YdjC homolog (bacterial) protein-coding 0.102881 0.696721 -3(CCTTCCGGGCCG,-,0.00) 65(GGCGTGGA,-,0.00) 52(CCTCGGAC,+,0.00) -80(TGCGGCTCCGCA,-,0.00) -121(GGGCGGAGCT,+,0.00) 20(GGCGCCACGGCG,+,0.00),22(CGCCACGGCGGG,-,0.00) -76(GCTCCGCACC,-,0.00) 561_WT_peak_7287 chr9 71394564 71394821 + 82 NA promoter-TSS (NM_138333) promoter-TSS (NM_138333) -272 NM_138333 116224 Hs.655572 NM_138333 HPRD:10074 FAM122A C9orf42 family with sequence similarity 122A protein-coding 0.042802 0.515504 -139(GCTTCCCGCTTC,-,0.00) 561_WT_peak_5372 chr3 196669211 196669501 + 82 NA promoter-TSS (NR_024388) promoter-TSS (NR_024388) 108 NM_007362 22916 Hs.591671 NM_007362 HPRD:05503 NCBP2 CBC2|CBP20|NIP1 nuclear cap binding protein subunit 2, 20kDa protein-coding 0.110345 0.652921 50(CCGCGATGGCGG,-,0.00) 47(CGTCCGCG,-,0.00) 34(CGGCACGA,-,0.00) -33(GCTGCGCA,+,0.00),-31(TGCGCAGC,-,0.00) 73(CGCGGAGGCGAG,+,0.00) -33(GCTGCGCAGC,+,0.00),-33(GCTGCGCAGC,-,0.00) -97(GCGGCCCGGCCT,+,0.00) 561_WT_peak_1298 chr11 59333801 59334038 + 82 NA Intergenic tRNA-Phe-TTY|tRNA|tRNA 28712 NR_036120 100422880 NR_036120 MIR3162 - microRNA 3162 ncRNA 0.042194 0.403361 561_WT_peak_1924 chr12 128044404 128044640 + 82 NA Intergenic Intergenic 76490 NR_120451 101927637 Hs.170413 NR_120451 ENSG00000256022 LOC101927637 - uncharacterized LOC101927637 ncRNA 0.021186 0.510549 -136(AAGTGGTT,+,0.00) -133(TGGTTTTG,-,0.00) -74(CTCCATGGCGCC,-,0.00) 561_WT_peak_1334 chr11 64645984 64646232 + 82 NA 5' UTR (NM_006795, exon 1 of 5) 5' UTR (NM_006795, exon 1 of 5) 132 NM_006795 10938 Hs.523774 NM_006795 HPRD:09325 EHD1 H-PAST|HPAST1|PAST|PAST1 EH-domain containing 1 protein-coding 0.125000 0.759036 -36(AGCGGCCT,-,0.00),-8(TGGCGGCT,+,0.00) 11(GGCGGGGG,+,0.00) -1(TAGCGCCG,-,0.00) 50(CCCTCCCAGCCC,+,0.00) -101(ACTGCGCA,+,0.00),-54(GCTGCGCA,+,0.00) -163(GCGGGGCGAGGG,+,0.00),-139(GCGGGGCCGGCC,+,0.00),12(GCGGGGGCAGGG,+,0.00) -151(TGCGGAGCCGAG,+,0.00),-41(CGCGGAGCGGCC,+,0.00) 21(GGGCGGAATT,+,0.00),57(AGCCCCGCCC,-,0.00) -143(CGAGGCGG,+,0.00) -153(GGTGCGGAGC,+,0.00),1(GCGCCGCCGC,-,0.00) 561_WT_peak_6455 chr6 119215775 119216345 + 82 NA intron (NM_014034, intron 1 of 3) CpG 819 NM_014034 25842 Hs.292316 NM_014034 HPRD:16459 ASF1A CGI-98|CIA|HSPC146 anti-silencing function 1A histone chaperone protein-coding 0.126316 0.718039 337(GGAGGAGAGCGA,-,0.00) 101(CCCTCCGGGCCC,-,0.00) -152(GGCGGCCGCG,+,0.00),-103(GGCCGCCGAG,+,0.00) 390(CGGGGGAGGCGG,-,0.00) -161(TCGGCGCC,+,0.00) 68(GGGCTGGCTCCG,-,0.00) -148(GCCGCGGG,+,0.00),251(CCCCCGGC,-,0.00) 61(TCGCGCCG,+,0.00),151(TCGCGCCG,+,0.00) 69(GGCTGGCTCCGC,-,0.00),229(CTCTTGCCCCGC,-,0.00) -100(CGCCGAGGCGCG,+,0.00) 186(CCGAGTCG,-,0.00) -158(GCGCCTGGCGGC,-,0.00) 45(GCTGCGCCGC,+,0.00),45(GCTGCGCCGC,-,0.00),123(GCTGGGAAGG,+,0.00),234(GCCCCGCCGC,-,0.00) 66(CCGGGCTGGCTC,+,0.00) 561_WT_peak_1447 chr11 88070806 88071038 + 82 NA promoter-TSS (NM_001114173) promoter-TSS (NM_001114173) 19 NM_001114173 1075 Hs.128065 NM_001814 HPRD:03841 CTSC CPPI|DPP-I|DPP1|DPPI|HMS|JP|JPD|PALS|PDON1|PLS cathepsin C protein-coding 0.094828 0.669528 -27(CGGCCCGGAAAC,+,0.00) -162(GGCGGCGA,-,0.00) 24(GGGCGCCAGGCG,+,0.00) 34(CGCGTGCG,+,0.00),36(CGTGCGCG,-,0.00) -36(TAGCTACG,-,0.00) -11(GGGCGGGGTC,+,0.00) 561_WT_peak_6895 chr7 149562738 149562853 + 82 NA 3' UTR (NM_001099220, exon 8 of 8) 3' UTR (NM_001099220, exon 8 of 8) -7262 NM_145230 155066 Hs.556998 NM_145230 HPRD:12920 ATP6V0E2 ATP6V0E2L|C7orf32 ATPase, H+ transporting V0 subunit e2 protein-coding 0.008696 0.534483 561_WT_peak_1610 chr12 12867419 12867846 + 82 NA Intergenic Intergenic -2572 NM_004064 1027 Hs.238990 NM_004064 HPRD:02867 CDKN1B CDKN4|KIP1|MEN1B|MEN4|P27KIP1 cyclin-dependent kinase inhibitor 1B (p27, Kip1) protein-coding 0.032787 0.476636 161(AGACGCCT,-,0.00) 79(AGGATGGCGCTC,-,0.00) 146(CGTCGCTA,+,0.00) -120(GCTTCTCAGCCC,+,0.00) -56(GGGTTTTG,-,0.00) -2(TTTACCAG,-,0.00) 101(GCTCCCTGTTCC,-,0.00) -120(GCTTCTCAGC,-,0.00) 561_WT_peak_7190 chr8 145734175 145734589 + 82 NA promoter-TSS (NM_138431) promoter-TSS (NM_138431) -170 NM_138431 113655 Hs.7678 NM_138431 HPRD:14003 MFSD3 - major facilitator superfamily domain containing 3 protein-coding 0.108696 0.734940 -82(GAGTCCGGCCCG,-,0.00),175(GACTTCGGTTCT,-,0.00) -102(GGGGGCCGAG,+,0.00) 95(CCCCCTTCCCTG,+,0.00) -140(GCGACGCC,+,0.00) -27(GCCCCGCCCT,+,0.00) -154(GCCGCGGG,+,0.00),15(GCCGCGGG,+,0.00) -142(CAGCGACG,-,0.00) 240(GTACGACG,-,0.00) -16(TTTACCTG,-,0.00) 11(GGGAGCCGCGGG,+,0.00),126(GGGAGCCGCCGG,+,0.00) 109(GCCGCGCA,+,0.00) -54(GCGGGCCGAGGG,+,0.00),26(CAGTGGCCCCGC,-,0.00),84(CAGTGGCCCCGC,-,0.00) 9(CTGGGAGCCGCG,+,0.00) -154(GCCGCGGGGC,+,0.00) -78(CCGGCCCGGCCG,+,0.00),-9(GCGGCCTCGCAG,+,0.00) 561_WT_peak_172 chr1 35734263 35734557 + 82 NA promoter-TSS (NM_005095) promoter-TSS (NM_005095) -158 NM_005095 9202 Hs.269211 NM_005095 HPRD:10326 ZMYM4 CDIR|MYM|ZNF198L3|ZNF262 zinc finger, MYM-type 4 protein-coding 0.105442 0.701695 -7(CCCCGTCCCCGG,+,0.00),1(CCGGGCAGGCCC,-,0.00) 3(GGGCAGGCCCTC,-,0.00) -19(TCCCGGCCCC,+,0.00) 24(CGCGGACCCGTG,+,0.00) -122(GGGCTGATTT,+,0.00) 123(CGAGGCGG,+,0.00) 119(GCCGCGAGGC,+,0.00) 50(GCGGCCCGGCGC,+,0.00) 561_WT_peak_6657 chr7 44529986 44530452 + 82 NA 5' UTR (NM_015332, exon 1 of 6) 5' UTR (NM_015332, exon 1 of 6) 166 NM_015332 23386 Hs.488171 NM_015332 NUDCD3 NudCL NudC domain containing 3 protein-coding 0.096567 0.672377 161(ACTTCCGGTCCG,-,0.00) 29(CTCGGCCGCC,-,0.00) 286(CCTACGCG,-,0.00) 176(TCGTTCGG,-,0.00) 186(CCCGCGGC,-,0.00) -97(GTCCGATG,-,0.00),139(CGCCGGAC,+,0.00) 177(CGTTCGGCCCCC,-,0.00) -126(TGCGCGGC,-,0.00),147(GGCGCGGC,-,0.00) -124(CGCGGCCCCGGG,-,0.00),188(CGCGGCCCCGGG,-,0.00) 263(CCGACAAG,-,0.00),287(CTACGCGG,+,0.00) 153(GCTGCGGAAC,+,0.00) 26(CAGCTCGGCCGC,-,0.00) 561_WT_peak_2387 chr14 104095419 104095801 + 82 NA promoter-TSS (NM_001130107) promoter-TSS (NM_001130107) 85 NM_005552 3831 Hs.20107 NM_005552 HPRD:02489 KLC1 KLC|KNS2|KNS2A kinesin light chain 1 protein-coding 0.138743 0.767624 -11(GGCGGCCGAG,+,0.00),51(CTCGGCGGCC,-,0.00),54(GGCGGCCAAG,+,0.00),77(GGTGGCCGAG,+,0.00) 9(TGGGTCGG,-,0.00) -61(GCCGGGGG,+,0.00),37(GCCGCGGG,+,0.00),189(CGCCCGGC,-,0.00) -103(TCATGCCG,+,0.00) -124(GCGGGGCGAGGG,+,0.00),-78(GCGGGGCGAGGC,+,0.00),186(GCGCGCCCGGCG,+,0.00) 31(CGAGGAGCCGCG,+,0.00),173(CGCTGCTCCGCG,-,0.00) -72(CGAGGCGG,+,0.00),151(CGAGGCGG,+,0.00) 37(GCCGCGGGGC,+,0.00),90(GCTGCGGGGC,+,0.00) 561_WT_peak_6002 chr5 158690068 158690633 + 81 NA 5' UTR (NM_145049, exon 1 of 11) 5' UTR (NM_145049, exon 1 of 11) 261 NM_145049 134510 Hs.591733 NM_145049 HPRD:08318 UBLCP1 CPUB1 ubiquitin-like domain containing CTD phosphatase 1 protein-coding 0.086726 0.625442 47(GGTTCCGGTCCC,-,0.00) 43(AGCCGGTT,-,0.00) -160(CGCACGCG,-,0.00) -124(CGGCGCTA,+,0.00) 262(GTCTGACG,-,0.00) 34(CGGTTTTT,-,0.00),363(GGGTTTTG,-,0.00) 346(GCTTTCTGTTTC,-,0.00) 299(CGCGGGGGCCGC,-,0.00) 304(GGGCCGCTGT,+,0.00) 216(GCGGCGTGGCTT,+,0.00),268(CGCCCAGGCCCC,-,0.00) 561_WT_peak_3419 chr18 3526038 3526239 + 81 NA intron (NM_001242764, intron 7 of 9) intron (NM_001242764, intron 7 of 9) 59890 NR_110428 100505592 Hs.635114 NR_110428 ENSG00000266835 LOC100505592 - uncharacterized LOC100505592 ncRNA 0.009950 0.470297 561_WT_peak_4885 chr22 31365306 31365842 + 81 NA non-coding (NR_002323, exon 1 of 3) non-coding (NR_002323, exon 1 of 3) 377 NR_110492 55000 Hs.554829 NR_002323 TUG1 LINC00080|NCRNA00080|TI-227H taurine up-regulated 1 (non-protein coding) ncRNA 0.125000 0.728119 -9(CCCGGCCGCC,-,0.00) -55(TGGCGGCT,+,0.00) -114(CCCCCCTCCCGG,+,0.00),-113(CCCCCTCCCGGG,+,0.00),144(CGGGGGAGGCGG,-,0.00),186(CCGGGGAGGCGG,-,0.00) 339(GGGCGGGAGCTC,-,0.00) 47(CTCGTACG,+,0.00),49(CGTACGCA,-,0.00) -60(TCGGTTGG,-,0.00),61(TCGGGCGG,-,0.00) 337(AGGGGCGGGA,-,0.00) 167(GCCGCGGG,+,0.00),193(GGCGGGGG,+,0.00) 29(TCGCGCCG,+,0.00) 271(GGGGGCCGGAGG,+,0.00) -15(CGCAGGCCCGGC,-,0.00),26(CGCTCGCGCCGC,-,0.00),155(GCGGCGGCAGCG,+,0.00),204(CCGGGGCCGGCT,+,0.00) 561_WT_peak_4781 chr21 35720306 35720478 + 81 NA Intergenic Intergenic -15931 NM_172201 9992 Hs.551521 NM_172201 KCNE2 ATFB4|LQT5|LQT6|MIRP1 potassium voltage-gated channel, Isk-related family, member 2 protein-coding 0.029070 0.508671 561_WT_peak_1354 chr11 65192492 65193279 + 81 NA non-coding (NR_028272, exon 1 of 1) non-coding (NR_028272, exon 1 of 1) 2616 NR_028272 283131 Hs.523789 NR_002802 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA 0.012706 0.416244 480(AGGTGTCT,+,0.00) 551(TCGTGCCT,+,0.00) 268(CGTCAGAC,+,0.00) 168(TTTACCAG,-,0.00) 561_WT_peak_6428 chr6 109217359 109217540 + 81 NA intron (NM_032131, intron 6 of 17) intron (NM_032131, intron 6 of 17) 27857 NR_104137 101929716 NR_104137 ARMC2-AS1 - ARMC2 antisense RNA 1 ncRNA 0.005525 0.346154 561_WT_peak_3188 chr17 41277634 41277650 + 81 NA promoter-TSS (NM_007300) promoter-TSS (NM_007300) 42 NR_003108 10230 Hs.373818 NM_005821 HPRD:10115 NBR2 NCRNA00192 neighbor of BRCA1 gene 2 (non-protein coding) ncRNA 0.000000 0.705882 561_WT_peak_1295 chr11 59323840 59324087 + 81 NA Intergenic tRNA-Lys-AAA|tRNA|tRNA 38668 NR_036120 100422880 NR_036120 MIR3162 - microRNA 3162 ncRNA 0.044534 0.508065 -104(GGGCCCGGATAG,+,0.00) -120(AAACGCTT,-,0.00) -91(TCAGTCGG,-,0.00),-36(TCGGGCGG,-,0.00) 561_WT_peak_4723 chr20 62257824 62258055 + 81 NA intron (NM_012384, intron 1 of 9) CpG 442 NM_012384 26205 Hs.473286 NM_012384 HPRD:16245 GMEB2 P79PIF|PIF79 glucocorticoid modulatory element binding protein 2 protein-coding 0.103896 0.771552 51(AGGCCGCT,+,0.00) 561_WT_peak_6132 chr6 25138773 25139012 + 81 NA promoter-TSS (NR_027626) promoter-TSS (NR_027626) -272 NR_027626 8418 Hs.484918 NR_002174 CMAHP CMAH|CSAH cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene pseudo 0.008368 0.404167 561_WT_peak_1081 chr10 88853996 88854580 + 81 NA promoter-TSS (NM_019054) promoter-TSS (NM_019054) 488 NM_005271 2746 Hs.500409 NM_005271 HPRD:11748 GLUD1 GDH|GDH1|GLUD glutamate dehydrogenase 1 protein-coding 0.111301 0.719658 -45(GGGCCCGGTAGC,+,0.00) 283(CGCGGCCGAG,+,0.00) -113(CAGGGAGGGCGG,-,0.00) -93(CCGGCCGA,+,0.00),187(GCGGTCGG,-,0.00) 321(GCCCGGCCCG,+,0.00) 216(GCCGGGCG,+,0.00) -148(CGGCAGGA,-,0.00),-7(TCGCGCCG,+,0.00) -91(GGCCGACG,-,0.00),294(CGGCGGAC,+,0.00) 55(GCCGCGCA,+,0.00) 129(TGCTGGCGCCGC,-,0.00),257(GGCTGTCCCCGG,-,0.00),265(CCGGGCCCAGCC,+,0.00),317(GCGGGCCCGGCC,+,0.00) 281(AACGCGGCCG,-,0.00) 198(CCGCCTCG,-,0.00),288(CCGAGTCG,-,0.00),289(CGAGTCGG,+,0.00) 240(GCTGCGGGGC,+,0.00) -98(GGGGCCCGGCCG,+,0.00) 561_WT_peak_4767 chr21 33032015 33032197 + 81 NA exon (NM_000454, exon 1 of 5) exon (NM_000454, exon 1 of 5) 171 NM_000454 6647 Hs.443914 NM_000454 HPRD:00937 SOD1 ALS|ALS1|HEL-S-44|IPOA|SOD|hSod1|homodimer superoxide dismutase 1, soluble protein-coding 0.087912 0.639344 5(AGGCCGCT,+,0.00) -94(GGCGACGA,-,0.00) -21(AGGGCTGGGA,-,0.00) -95(TGGCGACG,-,0.00) -20(GGGCTGGGACGG,-,0.00) 561_WT_peak_1158 chr10 121298216 121298386 + 81 NA intron (NM_001005339, intron 1 of 4) intron (NM_001005339, intron 1 of 4) -2256 NM_002925 6001 Hs.501200 NM_002925 HPRD:04172 RGS10 - regulator of G-protein signaling 10 protein-coding 0.023529 0.584795 561_WT_peak_2054 chr13 50698308 50698521 + 81 NA intron (NR_109974, intron 2 of 6) CpG 1263 NR_002612 8847 Hs.547964 NR_002612 DLEU2 1B4|BCMSUN|DLB2|LEU2|LINC00022|MIR15AHG|NCRNA00022|RFP2OS|TRIM13OS deleted in lymphocytic leukemia 2 (non-protein coding) ncRNA 0.122066 0.775701 -86(CCAGCCTCCGCC,+,0.00),-79(CCGCCCTGCGCC,+,0.00) -20(CATTCCGGTCCC,-,0.00) -35(GGCGGCCGCG,+,0.00) -124(CCGCCCCCTCGG,+,0.00) -8(AGGGCGGGGA,-,0.00) -127(CCCCCGCC,-,0.00) -91(CGGCACCA,-,0.00) 12(CGGGAGAAGCAG,+,0.00) -140(TGCGCGGG,-,0.00) -138(CGCGGGGTCCGC,-,0.00) 561_WT_peak_3093 chr17 27182032 27182224 + 81 NA promoter-TSS (NM_005702) promoter-TSS (NM_005702) 85 NM_005702 26284 Hs.3426 NM_005702 HPRD:08466 ERAL1 ERA|ERAL1A|H-ERA|HERA-A|HERA-B Era-like 12S mitochondrial rRNA chaperone 1 protein-coding 0.078125 0.637306 -3(CGCGGGGTCCGC,-,0.00) 2(GGTCCGCTTT,+,0.00) -6(CGTCGCGG,+,0.00) 561_WT_peak_3672 chr19 17186089 17186334 + 81 NA promoter-TSS (NM_004145) promoter-TSS (NM_004145) 132 NM_001011699 93323 Hs.404088 NM_033417 HPRD:11318 HAUS8 DGT4|HICE1|NY-SAR-48 HAUS augmin-like complex, subunit 8 protein-coding 0.081633 0.662602 -158(GGGGTCGA,-,0.00),-88(GGCGTCTA,-,0.00) 48(GGTCGGAC,+,0.00) 20(CAAAGCCG,+,0.00) -21(TTTTCCCG,-,0.00) 561_WT_peak_7616 chrX 134518161 134518463 + 81 NA Intergenic Intergenic -12042 NR_104652 100506790 Hs.161358 NR_104652 ENSG00000229015 LOC100506790 - uncharacterized LOC100506790 ncRNA 0.013245 0.412541 18(AGAGGCCT,-,0.00),111(AGCCACTT,-,0.00) -24(CTGCACGA,-,0.00) 561_WT_peak_4051 chr2 44222894 44223079 + 81 NA exon (NM_133259, exon 1 of 38) exon (NM_133259, exon 1 of 38) 158 NM_133259 10128 Hs.368084 NM_133259 HPRD:06343 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine-rich pentatricopeptide repeat containing protein-coding 0.124324 0.779570 -107(CGGCGCGA,-,0.00),-14(CGGCACGC,-,0.00) -34(CGGGAGGCGCGG,+,0.00) -164(CCCTGGCGCCGC,-,0.00),-108(CCGGCGCGAGCG,+,0.00),-26(GCGGGGCCGCCC,+,0.00) -27(CGCGGGGCCGCC,+,0.00) -61(GCCGCCAGGGAG,+,0.00) -159(GCGCCGCAGC,-,0.00) -73(CAGCCGGCCCGG,-,0.00) 561_WT_peak_1243 chr11 33278975 33279394 + 81 NA promoter-TSS (NM_001278162) promoter-TSS (NM_001278162) 316 NM_005734 10114 Hs.201918 NM_005734 HPRD:05111 HIPK3 DYRK6|FIST3|PKY|YAK1 homeodomain interacting protein kinase 3 protein-coding 0.095465 0.728571 124(CTCAGCCGCC,-,0.00) 127(AGCCGCCA,-,0.00) 29(CCGGGAAGGAAG,-,0.00) -26(CCGACCGG,+,0.00),93(GCGGTCGG,-,0.00) 181(TGGTGCCG,+,0.00),217(CGGCACGG,-,0.00) -143(CGTCGCCA,+,0.00) 120(TCCTCTCAGCCG,+,0.00) -155(CGCAGGCCCCGC,-,0.00),-73(CGTGGGCCCCGC,-,0.00) 61(GCTTAGCAGC,-,0.00) 561_WT_peak_5926 chr5 134094108 134094635 + 81 NA promoter-TSS (NM_014829) promoter-TSS (NM_014829) -53 NR_125341 9879 Hs.406549 NM_014829 HPRD:10862 DDX46 PRPF5|Prp5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 protein-coding 0.089184 0.607955 56(CCGGGAAGACTG,-,0.00) 271(GGCGTTGA,-,0.00) 96(GGGCCGGCGCTG,-,0.00),182(CGGCGCCAGCAC,+,0.00) -102(CGTGTACG,+,0.00) 153(CCGGTCGG,-,0.00),345(GCGGTCGG,-,0.00) 37(GCCGGGCG,+,0.00),267(GCCGGGCG,+,0.00) 171(CCTTCGGCTGCC,-,0.00) 204(CGTTGGCCGCGC,-,0.00) 561_WT_peak_3149 chr17 37023832 37024071 + 81 NA Intergenic tRNA-Cys-TGY|tRNA|tRNA -2161 NR_073384 3927 Hs.741156 NM_006148 HPRD:04229 LASP1 Lasp-1|MLN50 LIM and SH3 protein 1 protein-coding 0.033473 0.470833 -44(CAAATCCG,+,0.00) -121(TTTACCAG,-,0.00) 561_WT_peak_7259 chr9 37800615 37800797 + 81 NA promoter-TSS (NM_024345) promoter-TSS (NM_024345) -77 NM_024345 79269 Hs.118394 NM_024345 HPRD:08319 DCAF10 WDR32 DDB1 and CUL4 associated factor 10 protein-coding 0.109890 0.699454 -49(GGTGGCCGAG,+,0.00) -9(AGGCCGCT,+,0.00) -73(CAGCTTTCCCGG,+,0.00) -57(CGGCGGAC,+,0.00) -90(CAAACCCG,+,0.00) 561_WT_peak_3746 chr19 37568928 37569415 + 81 NA promoter-TSS (NM_144689) promoter-TSS (NM_144689) -211 NM_144689 147923 Hs.444992 NM_144689 HPRD:08122 ZNF420 APAK zinc finger protein 420 protein-coding 0.090349 0.696721 12(GCGGGCGGGCGG,-,0.00) 18(GGGCGGGCACTC,-,0.00) 108(GCCCGGGCCT,+,0.00) -109(CAGCTCCTCCCC,-,0.00) -11(CGTCTGAC,+,0.00),-10(GTCTGACG,-,0.00) -145(CAAATCCG,+,0.00) 270(GGGCCGCGTC,+,0.00) 294(GCTCCGCACC,-,0.00) 561_WT_peak_5826 chr5 77655845 77656310 + 81 NA promoter-TSS (NM_004866) promoter-TSS (NM_004866) -250 NR_110885 9522 Hs.482587 NM_004866 HPRD:06072 SCAMP1 SCAMP|SCAMP37 secretory carrier membrane protein 1 protein-coding 0.092473 0.643777 269(GGATCCGGGCCC,-,0.00),275(GGGCCCGGAGGA,+,0.00) -120(CCGCGCCCCCGC,+,0.00) 242(TCGGTCGC,-,0.00) -115(CCCCCGCC,-,0.00) 179(TCGTGGCG,+,0.00) 128(CGGCTGAGAGCG,-,0.00) -57(GTCCCACG,-,0.00) -121(GCCGCGCC,+,0.00),-26(TGCGCGGC,-,0.00) 238(CTACTCGG,+,0.00) 561_WT_peak_700 chr1 205744540 205744748 + 81 NA promoter-TSS (NM_001135664) promoter-TSS (NM_001135664) -34 NM_001135664 8934 Hs.115325 NM_003929 HPRD:11962 RAB29 RAB7L|RAB7L1 RAB29, member RAS oncogene family protein-coding 0.067308 0.545455 -138(TCCCCTTCCTCC,+,0.00) -164(TAGACGCC,+,0.00) -137(CCCCTTCCTCCG,-,0.00) -40(CCGCGAAG,-,0.00) 561_WT_peak_2503 chr15 60690435 60690905 + 81 NA promoter-TSS (NM_001136015) promoter-TSS (NM_001136015) -485 NM_004039 302 Hs.511605 NM_004039 HPRD:01061 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding 0.048936 0.566879 131(CGGGGAGGGAGG,-,0.00) -153(CCGTTTCTTCCT,-,0.00),292(CCGCTTCTCTCC,-,0.00) 209(GGGCTGGGAGGC,-,0.00) 221(CAAAGCCG,+,0.00) 157(GCTGCAAAGC,+,0.00),211(GCTGGGAGGC,+,0.00) 561_WT_peak_5842 chr5 81972528 81972717 + 81 NA Intergenic Intergenic -163352 NR_039773 100616297 NR_039773 MIR3977 - microRNA 3977 ncRNA 0.015873 0.384211 561_WT_peak_4294 chr2 129079432 129079646 + 81 NA Intergenic Intergenic -3368 NM_004807 9394 Hs.512841 NM_004807 HPRD:07274 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding 0.116822 0.651163 -73(GCCCCCTCCCGG,+,0.00) -51(CGCGGACG,+,0.00) -126(TCCCGGCCCA,+,0.00) -38(GCGGGGGCAGCA,+,0.00) -28(CACGCGGCCC,-,0.00) -25(GCGGCCCGGCCC,+,0.00) 561_WT_peak_4320 chr2 143886346 143886556 + 81 NA promoter-TSS (NM_018460) promoter-TSS (NM_018460) -448 NM_018460 55843 Hs.171011 NM_018460 HPRD:06447 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding 0.009524 0.511848 -7(AGGTGGCT,+,0.00) -62(AGGTTTTG,-,0.00) -139(GCGGCGTGGCTC,+,0.00) 561_WT_peak_6093 chr6 7389628 7390357 + 81 NA promoter-TSS (NM_031480) promoter-TSS (NM_031480) -50 NM_001170693 285782 Hs.721486 NM_175745 HPRD:10511 CAGE1 CT3|CT95|CTAG3|bA69L16.7 cancer antigen 1 protein-coding 0.091907 0.646575 350(TCCACGCC,+,0.00),490(TCGACGAC,+,0.00) -66(CCGAGCGA,+,0.00),280(TCTGTCGG,-,0.00) 202(AGGGGCGGGA,-,0.00) -106(GCCGGGGG,+,0.00) 33(TCCTGCCG,+,0.00),105(CCGTGCCG,+,0.00) 78(GGGAAGAAACGG,+,0.00) 299(CGTCGCAC,+,0.00) 293(TTTTCCCG,-,0.00) 409(CGCAGAGCGGCG,+,0.00) 237(CGAGGCGG,+,0.00),494(CGACGCGG,+,0.00) 561_WT_peak_6747 chr7 91569979 91570590 + 81 NA promoter-TSS (NM_005751) promoter-TSS (NM_005751) 95 NM_005751 10142 Hs.651221 NM_005751 HPRD:04921 AKAP9 AKAP-9|AKAP350|AKAP450|CG-NAP|HYPERION|LQT11|MU-RMS-40.16A|PPP1R45|PRKA9|YOTIAO A kinase (PRKA) anchor protein 9 protein-coding 0.090016 0.687908 334(GCAACCGGGCCT,-,0.00) -158(CTCGGCCGCC,-,0.00) -12(AGGCGGCT,+,0.00),156(AATCGGCT,+,0.00) -58(CCCGGAGGGCTG,-,0.00),422(CCGAGAGGGAGG,-,0.00) -27(GAGCACCTGCCC,+,0.00),143(GAGCGCCGGACC,+,0.00) 133(TCGGGCGG,-,0.00),149(CGGACCGA,+,0.00) -53(AGGGCTGGGC,-,0.00) 136(GGCGGGGG,+,0.00) 289(CAGAAGAAGCTG,+,0.00) 370(GGGGTGGGAGGG,-,0.00) 146(CGCCGGAC,+,0.00) -5(TGCGCGGA,-,0.00) -50(GCTGGGCCGGGG,+,0.00),56(GCGGCGGCGGCG,+,0.00),59(GCGGCGGCGGCG,+,0.00) -11(GGCGGCTGCGCG,-,0.00) -14(CGAGGCGG,+,0.00),21(CCGCCTCG,-,0.00) -46(GGCCGGGGCGGC,-,0.00),267(GGCCATGGAGGA,-,0.00) 137(GCGGGGGAGC,+,0.00) -161(CAGCTCGGCCGC,-,0.00) 561_WT_peak_4988 chr3 4887673 4887898 + 81 NA intron (NM_001168272, intron 60 of 60) intron (NM_001168272, intron 60 of 60) -52125 NR_037903 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA 0.013333 0.389381 -148(TAGCGATG,-,0.00) 561_WT_peak_1738 chr12 57916598 57916792 + 81 NA promoter-TSS (NM_052897) promoter-TSS (NM_052897) 36 NM_052897 114785 Hs.524523 NM_052897 HPRD:11296 MBD6 - methyl-CpG binding domain protein 6 protein-coding 0.123711 0.784615 -128(AGGCCGCT,+,0.00) 12(CCGGCCGA,+,0.00) 3(AGGGCGGGGC,-,0.00) -136(TGCGCGGG,-,0.00),-4(ACTGCGCA,+,0.00) -108(GCGGCGGCAGCG,+,0.00),6(GCGGGGCCGGCC,+,0.00) -150(GCCCCCATGGCG,+,0.00),-148(CCCCATGGCGCA,-,0.00) 561_WT_peak_6689 chr7 66146782 66147019 + 81 NA promoter-TSS (NM_001287060) promoter-TSS (NM_001287060) -178 NR_104676 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor (GEF) 1 protein-coding 0.097046 0.655462 -106(TCGCCCTCCCGC,+,0.00) -110(GGCGTCGC,-,0.00) -83(GGGAGCCGGAAG,+,0.00),56(CCTTTGGATCCC,-,0.00) -93(GCTGCGCA,+,0.00) -118(GCGGTGCCGGCG,+,0.00) -29(GCTCCCCAGC,-,0.00) 561_WT_peak_6858 chr7 138145179 138145351 + 81 NA 5' UTR (NM_015905, exon 1 of 19) 5' UTR (NM_015905, exon 1 of 19) 186 NM_015905 8805 Hs.490287 NM_003852 HPRD:04556 TRIM24 PTC6|RNF82|TF1A|TIF1|TIF1A|TIF1ALPHA|hTIF1 tripartite motif containing 24 protein-coding 0.139535 0.768786 -125(GGAGGAGGAGGA,-,0.00) -149(AGCGGCCT,-,0.00),-11(AGCGGCCT,-,0.00) -19(GCGGCGGCAGCG,+,0.00) 561_WT_peak_3000 chr17 5322473 5323042 + 81 NA promoter-TSS (NM_001160266) promoter-TSS (NM_001160266) -204 NM_001160266 84268 Hs.462086 NM_032308 HPRD:14615 RPAIN HRIP|RIP RPA interacting protein protein-coding 0.087873 0.622807 319(CTCGGCGGCC,-,0.00) 62(TCGCCGCC,+,0.00),179(GGCGGCGA,-,0.00),182(GGCGACGA,-,0.00) -96(CGCGTATG,+,0.00) 221(TCGGTTGG,-,0.00) -84(CGTCGGAG,+,0.00) 77(GGGCCCCGAAGG,+,0.00) 63(CGCCGCCGCCGC,-,0.00),174(GCGGCGGCGGCG,+,0.00) 249(CCCGGAGCCGCA,+,0.00) 384(CAGCCAATCCGC,-,0.00) 561_WT_peak_1851 chr12 110905850 110906036 + 81 NA promoter-TSS (NM_013300) promoter-TSS (NM_013300) 146 NM_001164373 51184 Hs.634680 NM_016301 HPRD:17498 GPN3 ATPBD1C GPN-loop GTPase 3 protein-coding 0.069892 0.652406 -24(GCTGCGCA,+,0.00) 2(CCCGGAGCCGCC,+,0.00) 561_WT_peak_7448 chr9 131902451 131902796 + 81 NA intron (NM_001271832, intron 7 of 8) intron (NM_001271832, intron 7 of 8) 28656 NM_001193397 5524 Hs.400740 NM_021131 HPRD:02858 PPP2R4 PP2A|PR53|PTPA protein phosphatase 2A activator, regulatory subunit 4 protein-coding 0.017391 0.563584 -123(GGGCTGCAGCTC,-,0.00) -36(GATTCCTTTTTC,-,0.00) 561_WT_peak_6576 chr7 4681508 4681773 + 81 NA Intergenic CpG -40290 NM_001037165 221937 Hs.487393 NM_001037165 HPRD:18750 FOXK1 FOXK1L forkhead box K1 protein-coding 0.128302 0.744361 59(GCTGCCGGGGCG,-,0.00) -97(GGCGCGGC,-,0.00),16(GCTGCGCA,+,0.00),18(TGCGCAGC,-,0.00),46(ACTGCGCA,+,0.00) 24(GCGTGGCCAGCC,+,0.00) -15(AGACCGGCCC,-,0.00) 16(GCTGCGCAGC,+,0.00),16(GCTGCGCAGC,-,0.00) 31(CAGCCGGACCGC,-,0.00) 561_WT_peak_3383 chr17 79268781 79269050 + 81 NA 5' UTR (NM_001037984, exon 1 of 16) 5' UTR (NM_001037984, exon 1 of 16) 224 NM_001037984 124565 Hs.352240 NM_138570 HPRD:17506 SLC38A10 - solute carrier family 38, member 10 protein-coding 0.104089 0.740741 88(AGACCCGGAAGA,+,0.00) -122(CCGGGACGCCGG,-,0.00) 49(TCGCTCGG,-,0.00) 11(CCGCCAAG,-,0.00) 10(CCCGCCAAGCCC,+,0.00) -18(GCTGCGGGGG,+,0.00) 61(GCGGGCCGCCTG,+,0.00) 561_WT_peak_4320-2 chr2 143886702 143886974 + 81 NA promoter-TSS (NM_018460) promoter-TSS (NM_018460) -61 NM_018460 55843 Hs.171011 NM_018460 HPRD:06447 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding 0.011029 0.362637 -24(AAGTGGTT,+,0.00) 12(CCCCCGCC,-,0.00) 97(CGTTTTTG,-,0.00) 561_WT_peak_1168 chr10 129985773 129985845 + 81 NA Intergenic Intergenic -61341 NM_001145966 4288 Hs.80976 NM_002417 HPRD:08902 MKI67 KIA|MIB-|MIB-1|PPP1R105 marker of proliferation Ki-67 protein-coding 0.027778 0.561644 561_WT_peak_4859 chr22 24951531 24952042 + 81 NA promoter-TSS (NM_001284255) promoter-TSS (NM_001284255) 117 NM_001284251 83606 Hs.9850 NM_031444 HPRD:12796 GUCD1 C22orf13|LLN4 guanylyl cyclase domain containing 1 protein-coding 0.068493 0.623047 312(CGGACCGA,+,0.00) 166(AGGAGGAAGCGG,+,0.00) -156(TTTATCCG,-,0.00) 215(GCGGGCCCTGCG,+,0.00) -19(CGCGTCTCCGCC,-,0.00) 561_WT_peak_6 chr1 1034419 1035246 + 81 NA intron (NM_017891, intron 1 of 9) L1M5|LINE|L1 16904 NM_017891 54991 Hs.235095 NM_017891 HPRD:07930 C1orf159 - chromosome 1 open reading frame 159 protein-coding 0.014510 0.358696 561_WT_peak_6501 chr6 144385328 144385562 + 81 NA intron (NM_001289043, intron 1 of 6) CpG 290 NM_001080955 5325 Hs.743225 NM_002656 HPRD:16010 PLAGL1 LOT1|ZAC|ZAC1 pleiomorphic adenoma gene-like 1 protein-coding 0.128205 0.757447 -91(CCGCCATCCCCG,+,0.00),37(CCGCGCCCCCGG,+,0.00),45(CCGGCTCCCCGC,+,0.00) 7(GAGCCCCCGCCC,+,0.00) -95(CCGACCGC,+,0.00) 10(CCCCCGCC,-,0.00),42(CCCCCGGC,-,0.00) -81(CGGCAGGA,-,0.00),-22(CGGCACGT,-,0.00),-5(CGGCACGG,-,0.00) 42(CCCCCGGCTCCC,-,0.00) -149(GAAAAGGGAAGC,+,0.00) 36(GCCGCGCC,+,0.00) 44(CCCGGCTCCCCG,-,0.00) 55(GCCCCGCTGC,-,0.00) 561_WT_peak_1090 chr10 91174569 91174834 + 81 NA intron (NM_012420, intron 1 of 1) CpG 376 NM_012420 24138 Hs.252839 NM_012420 HPRD:17130 IFIT5 P58|RI58 interferon-induced protein with tetratricopeptide repeats 5 protein-coding 0.094340 0.680451 32(GGTGGCCGAG,+,0.00) 24(CCGGGGAGGGTG,-,0.00) -136(CGTCGGCC,+,0.00) -115(GGGCTGCTTT,+,0.00),-70(GGGCCGAGCC,+,0.00) 48(CTTCTCGG,+,0.00) 561_WT_peak_5358 chr3 187872094 187872367 + 81 NA promoter-TSS (NR_036497) promoter-TSS (NR_036497) -354 NR_036497 339929 Hs.596639 NR_036497 ENSG00000270959 LPP-AS2 - LPP antisense RNA 2 ncRNA 0.102564 0.718978 -39(GGGGGAGGGGGA,-,0.00) 77(ATCCGCTT,-,0.00) 30(CCCCCTGCCCGG,+,0.00) -10(AGCGTCGA,-,0.00),-6(TCGACCCC,+,0.00) -151(CCCCCGGC,-,0.00) -147(CGGCGCGA,-,0.00) -14(CAAAAGCG,+,0.00) -148(CCGGCGCGAGCG,+,0.00),63(GCGGGGCCACGC,+,0.00) 5(CTAGGCGG,+,0.00) -47(CACGCCATGGGG,+,0.00) 561_WT_peak_2253-2 chr14 64331402 64331802 + 81 NA intron (NM_182914, intron 1 of 115) intron (NM_182914, intron 1 of 115) 11919 NM_182914 23224 Hs.745014 NM_015180 HPRD:09763 SYNE2 EDMD5|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing, nuclear envelope 2 protein-coding 0.002500 0.394015 -10(GTGCTGATAGGG,-,0.00) -103(GGGGTAAA,+,0.00) 561_WT_peak_6687 chr7 65958225 65958607 + 81 NA Intergenic Intergenic -93021 NR_026873 285908 Hs.50755 NM_181722 HPRD:14160 LINC00174 NCRNA00174 long intergenic non-protein coding RNA 174 ncRNA 0.062827 0.587467 47(CCACCCTTCTCC,+,0.00) 180(ACGACGCC,+,0.00) 29(TGGGTCGG,-,0.00) 170(CGGCGCTA,+,0.00) -28(CCGCCTCG,-,0.00) 561_WT_peak_4765 chr21 32726988 32727317 + 81 NA intron (NM_003253, intron 2 of 28) intron (NM_003253, intron 2 of 28) 204138 NM_003253 7074 Hs.517228 NM_003253 HPRD:02820 TIAM1 - T-cell lymphoma invasion and metastasis 1 protein-coding 0.009119 0.493939 561_WT_peak_7440 chr9 131133675 131133886 + 81 NA intron (NM_001135947, intron 1 of 3) CpG 182 NR_049743 81605 Hs.495229 NM_030914 URM1 C9orf74 ubiquitin related modifier 1 protein-coding 0.061611 0.617925 -103(CGTCGGGC,+,0.00) -14(CCGCCTAG,-,0.00) -127(GGCGCCGTGGGG,+,0.00) 561_WT_peak_7524 chrX 40943465 40943675 + 81 NA Intergenic Intergenic -1318 NM_001039590 8239 Hs.77578 NM_004652 HPRD:02091 USP9X DFFRX|FAF|FAM|MRX99 ubiquitin specific peptidase 9, X-linked protein-coding 0.038095 0.492891 -137(TCTTCCGGGTCC,-,0.00) 561_WT_peak_2609 chr15 91396043 91396303 + 81 NA Intergenic Intergenic -15649 NM_002569 5045 Hs.513153 NM_002569 HPRD:00653 FURIN FUR|PACE|PCSK3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding 0.023077 0.597701 69(ACCCATGGCGGG,-,0.00) 561_WT_peak_2253 chr14 64331135 64331294 + 81 NA intron (NM_182914, intron 1 of 115) intron (NM_182914, intron 1 of 115) 11531 NM_182914 23224 Hs.745014 NM_015180 HPRD:09763 SYNE2 EDMD5|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing, nuclear envelope 2 protein-coding 0.006289 0.431250 561_WT_peak_327 chr1 93646082 93646645 + 81 NA promoter-TSS (NM_001167830) promoter-TSS (NM_001167830) 90 NM_206886 343099 Hs.482873 NM_206886 ENSG00000122483 CCDC18 NY-SAR-41 coiled-coil domain containing 18 protein-coding 0.101243 0.648936 118(AGAGGCTT,-,0.00),221(AACCGGCT,+,0.00) 27(CCCGCGGC,-,0.00),347(GCCGGGCG,+,0.00) 177(CAGCGACG,-,0.00) 80(GTCCGAGG,-,0.00) 18(CCAACGGCTCCC,-,0.00) 148(AGCGCGCA,+,0.00) -103(GGCGGGCTCCGC,-,0.00) 561_WT_peak_7068 chr8 91013343 91013661 + 81 NA promoter-TSS (NM_001359) promoter-TSS (NM_001359) -78 NM_001359 1666 Hs.492212 NM_001359 HPRD:01959 DECR1 DECR|NADPH|SDR18C1 2,4-dienoyl CoA reductase 1, mitochondrial protein-coding 0.066038 0.605016 108(GGCGGCCTAG,+,0.00) 66(GGCGTCCA,-,0.00),70(TCCACGCC,+,0.00) 36(TCGGCCGG,-,0.00) 103(CCCCCGGC,-,0.00) -113(TGCGCAGC,-,0.00) 23(CTAGGCGG,+,0.00) 20(CAGCTAGGCGGC,-,0.00) 561_WT_peak_75 chr1 16302421 16302586 + 81 NA 5' UTR (NM_003443, exon 1 of 16) 5' UTR (NM_003443, exon 1 of 16) 124 NM_001287603 7709 Hs.433764 NM_003443 HPRD:04968 ZBTB17 MIZ-1|ZNF151|ZNF60|pHZ-67 zinc finger and BTB domain containing 17 protein-coding 0.109091 0.716867 -153(CCGGCTCCCGGG,+,0.00) -6(TCGGGCGG,-,0.00) -137(CCCCGGCCCCGG,-,0.00) 561_WT_peak_1976 chr13 30920665 30920904 + 81 NA intron (NR_024464, intron 4 of 4) intron (NR_024464, intron 4 of 4) 27267 NR_024464 100188949 Hs.439791 NR_024464 ENSG00000238121 LINC00426 - long intergenic non-protein coding RNA 426 ncRNA 0.004184 0.504167 -47(ACCTCCATGGCC,+,0.00) 561_WT_peak_6424 chr6 107781044 107781260 + 81 NA promoter-TSS (NM_020381) promoter-TSS (NM_020381) -373 NM_020381 57107 Hs.745008 NM_020381 HPRD:12879 PDSS2 C6orf210|COQ10D3|DLP1|bA59I9.3|hDLP1 prenyl (decaprenyl) diphosphate synthase, subunit 2 protein-coding 0.087963 0.691244 -34(GCGTGAAGGCGG,-,0.00) -120(GGCGTCGG,-,0.00) -116(TCGGGCGG,-,0.00) -143(CCCCCGGC,-,0.00),-39(GCCGGGCG,+,0.00) -81(TGTCGCTA,+,0.00) -118(CGTCGGGC,+,0.00) 32(CTAGTCGG,+,0.00) 561_WT_peak_1376 chr11 65868515 65868591 + 81 NA intron (NM_018026, intron 1 of 23) MLT1G1|LTR|ERVL-MaLR 30729 NM_018026 55690 Hs.644326 NM_018026 HPRD:06320 PACS1 MRD17 phosphofurin acidic cluster sorting protein 1 protein-coding 0.000000 0.272727 561_WT_peak_1467 chr11 104576359 104576901 + 81 NA Intergenic Intergenic -96600 NR_120585 102723895 Hs.48803 NR_120585 LOC102723895 - uncharacterized LOC102723895 ncRNA 0.005535 0.381215 -7(AAGCGTCT,+,0.00),40(AGAGACTT,-,0.00) -4(CGTCTCTA,+,0.00) -159(CAAAACTG,+,0.00),113(CAAAACAG,+,0.00) -37(TTTACCTG,-,0.00),-32(CTGGTAAA,+,0.00) 114(AAAACAGGAAGT,+,0.00) 561_WT_peak_1100 chr10 94352992 94353282 + 81 NA exon (NM_004523, exon 1 of 22) exon (NM_004523, exon 1 of 22) 312 NM_004523 3832 Hs.8878 NM_004523 HPRD:01023 KIF11 EG5|HKSP|KNSL1|MCLMR|TRIP5 kinesin family member 11 protein-coding 0.089655 0.676976 -112(GACTCCGGCCCC,-,0.00) -99(GTCGGCCGCC,-,0.00) -21(GGCGTCGC,-,0.00) -77(CCCTCACAGCGC,+,0.00),63(GGGCTGACAGGA,-,0.00) -156(CGTCGGTC,+,0.00) 111(TGCGCGGT,-,0.00) -94(CCGCCAAG,-,0.00) -95(GCCGCCAAGCCC,+,0.00),-27(CGTCATGGCGTC,-,0.00) -20(GCGTCGCAGC,-,0.00),89(GCTTCGCTGC,-,0.00) -94(CCGCCAAGCCCC,-,0.00),86(GCGGCTTCGCTG,+,0.00) 561_WT_peak_3742 chr19 37178106 37178455 + 81 NA promoter-TSS (NR_110707) promoter-TSS (NR_110707) 71 NR_110708 101927621 Hs.125653 NR_110707 LOC101927621 - uncharacterized LOC101927621 ncRNA 0.091691 0.642857 41(CCGCCCTCATCC,+,0.00) 10(CCGGGAGCTCGG,-,0.00) 101(GAAAACCG,+,0.00) -84(GCCGCGCA,+,0.00) 37(AGCGCCGCCC,-,0.00),102(AAAACCGCCC,-,0.00) -72(GCCGCCTTGTCC,+,0.00) 561_WT_peak_3643 chr19 13263889 13264248 + 81 NA exon (NM_004907, exon 2 of 2) exon (NM_004907, exon 2 of 2) 2786 NM_004907 9592 Hs.501629 NM_004907 HPRD:09997 IER2 ETR101 immediate early response 2 protein-coding 0.097493 0.680556 36(TGCACCGGAGTC,+,0.00) -66(GCCGTCGA,-,0.00) -80(CCCCCGCC,-,0.00) 66(TGCGCAGC,-,0.00) 169(CCGAGAAG,-,0.00) 561_WT_peak_2744 chr16 25268854 25269254 + 81 NA promoter-TSS (NM_001012981) promoter-TSS (NM_001012981) -199 NM_001012981 342357 Hs.513451 NM_001012981 HPRD:11268 ZKSCAN2 ZNF694|ZSCAN31|ZSCAN34 zinc finger with KRAB and SCAN domains 2 protein-coding 0.145000 0.770574 107(TCGGCCTCGTCC,+,0.00) 213(GGCGGGCGAG,+,0.00) 102(CGCGTTCG,+,0.00) -15(CCGACCGT,+,0.00) -131(CGCCCGGC,-,0.00),-83(GCCGCGGG,+,0.00),187(GCCGCGGG,+,0.00) -140(TGCAGGCCCCGC,-,0.00),-72(CGCTGGGGCCGC,-,0.00),189(CGCGGGGCCCGC,-,0.00),190(GCGGGGCCCGCG,+,0.00) 118(CACTCGGCCC,-,0.00) 56(GCTGCGGGGC,+,0.00),61(GGGGCGAAGC,+,0.00),187(GCCGCGGGGC,+,0.00) -93(CGTCCAGGCCGC,-,0.00),206(GCGTCCTGGCGG,+,0.00) 561_WT_peak_2677 chr16 3550792 3551021 + 81 NA promoter-TSS (NM_015041) promoter-TSS (NM_015041) -39 NM_015041 23059 Hs.155995 NM_015041 HPRD:10013 CLUAP1 CFAP22|FAP22 clusterin associated protein 1 protein-coding 0.113537 0.639130 -121(TAGACGCC,+,0.00) -41(ACGTGCCG,+,0.00) -164(CGTGTAAA,+,0.00) -143(GCTGGGAAGC,+,0.00) -70(CTGCCGGCCCGC,-,0.00) 561_WT_peak_1482 chr11 111636840 111637010 + 81 NA intron (NM_181699, intron 1 of 15) CpG 244 NM_001177562 5519 Hs.269128 NM_002716 HPRD:04384 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2, regulatory subunit A, beta protein-coding 0.100000 0.625731 -123(CTCGGCCACC,-,0.00) -141(GTCCGACT,-,0.00) -2(TAAAACCG,+,0.00) -109(CCGCGACG,-,0.00) 561_WT_peak_1383 chr11 66610565 66610770 + 81 NA promoter-TSS (NM_001032279) promoter-TSS (NM_001032279) -216 NM_001032279 9986 Hs.654972 NM_005133 HPRD:07289 RCE1 FACE2|RCE1A|RCE1B Ras converting CAAX endopeptidase 1 protein-coding 0.063415 0.694175 -45(GAGTCCCAGCCC,+,0.00) -1(CCCACCGA,+,0.00) -42(TCCCAGCCCT,+,0.00) 561_WT_peak_6470 chr6 130834893 130835175 + 81 NA Intergenic Intergenic 76772 NM_052913 114801 Hs.591341 NM_052913 HPRD:13901 TMEM200A KIAA1913|TTMA|TTMC transmembrane protein 200A protein-coding 0.007092 0.441696 -157(CAAAACAG,+,0.00) 561_WT_peak_886 chr10 11445328 11445483 + 81 NA Intergenic Intergenic 128874 NM_001080491 9712 Hs.498661 NM_014688 ENSG00000148429 USP6NL RNTRE|TRE2NL|USP6NL-IT1 USP6 N-terminal like protein-coding 0.032258 0.544872 -111(AAGTGGCT,+,0.00),-82(AACCGGCT,+,0.00) 561_WT_peak_3395 chr17 80231141 80231328 + 80 NA exon (NM_001893, exon 1 of 9) exon (NM_001893, exon 1 of 9) 360 NM_139062 1453 Hs.631725 NM_001893 HPRD:02920 CSNK1D ASPS|CKIdelta|FASPS2|HCKID casein kinase 1, delta protein-coding 0.128342 0.734043 -24(CTGCCCTCCCGG,+,0.00) -155(TCGGGCGG,-,0.00) -145(GGCGGGGG,+,0.00) -39(CGGCCCGA,-,0.00) -10(GCTTCCTGGGTC,-,0.00) -144(GCGGGGGCGGCG,+,0.00) -53(CTCCATGGCGGC,-,0.00) -138(GCGGCGGGGC,+,0.00) 561_WT_peak_3811 chr19 46320485 46320691 + 80 NA intron (NM_004819, intron 23 of 26) intron (NM_004819, intron 23 of 26) -1983 NM_030785 81492 Hs.146544 NM_030785 HPRD:09611 RSPH6A RSHL1|RSP4|RSP6|RSPH4B radial spoke head 6 homolog A (Chlamydomonas) protein-coding 0.048544 0.555556 -72(CCGTGCCG,+,0.00) 561_WT_peak_4780 chr21 35320897 35321247 + 80 NA promoter-TSS (NM_001288961) promoter-TSS (NM_001288961) -158 NM_001288961 400863 Hs.729814 NM_207472 LOC400863 - uncharactered LOC400863 protein-coding 0.011429 0.504274 83(CAGTTTTG,-,0.00) 561_WT_peak_3148 chr17 37010196 37010383 + 80 NA promoter-TSS (NM_000978) promoter-TSS (NM_000978) -236 NM_000978 9349 Hs.406300 NM_000978 RPL23 L23|rpL17 ribosomal protein L23 protein-coding 0.026738 0.462766 -52(TTGTGCCG,+,0.00) 14(CGGTTTCG,-,0.00) 561_WT_peak_4164 chr2 85152934 85153165 + 80 NA Intergenic Intergenic 20286 NM_021103 9168 Hs.446574 NM_021103 HPRD:01779 TMSB10 MIG12|TB10 thymosin beta 10 protein-coding 0.056277 0.603448 -59(GGAGAAGGGTGA,-,0.00) 561_WT_peak_1477 chr11 108368478 108368890 + 80 NA intron (NM_153705, intron 1 of 7) CpG 475 NM_153705 143888 Hs.83286 NM_153705 HPRD:13773 KDELC2 - KDEL (Lys-Asp-Glu-Leu) containing 2 protein-coding 0.092233 0.615012 -135(TCCGTCGG,-,0.00) 171(GCCGCGGG,+,0.00),214(GCCGCGGG,+,0.00) 218(CGGGACGA,-,0.00) -146(ATCCGACG,-,0.00) 80(TTTGCCCG,-,0.00) 166(CGCAGGCCGCGG,-,0.00) 164(CACGCAGGCCGC,-,0.00) 561_WT_peak_396 chr1 114889233 114889457 + 80 NA Intergenic Intergenic 164436 NM_015906 51592 Hs.26837 NM_015906 HPRD:10423 TRIM33 ECTO|PTC7|RFG7|TF1G|TIF1G|TIF1GAMMA|TIFGAMMA tripartite motif containing 33 protein-coding 0.093750 0.662222 -123(AGCGGCCT,-,0.00) -59(GGGCGCCAGCGC,+,0.00) -93(CGCCGTGGCGTC,-,0.00) -119(GCCTCGCAGC,-,0.00) -122(GCGGCCTCGCAG,+,0.00) 561_WT_peak_2441 chr15 41694545 41694892 + 80 NA promoter-TSS (NR_045620) promoter-TSS (NR_045620) -60 NM_016013 51103 Hs.106529 NM_016013 HPRD:09500 NDUFAF1 CGI65|CIA30 NADH dehydrogenase (ubiquinone) complex I, assembly factor 1 protein-coding 0.054755 0.586207 -31(AGCCACTT,-,0.00) 41(CCGGCCGA,+,0.00) -144(CCCCCTCAACCC,+,0.00) -25(TTTACCCG,-,0.00) 561_WT_peak_4947 chr22 42394829 42395201 + 80 NA TTS (NM_019106) TTS (NM_019106) 286 NM_152613 164684 Hs.655541 NM_152613 HPRD:14512 WBP2NL PAWP WBP2 N-terminal like protein-coding 0.104839 0.662198 72(GGCGGAGGCCGG,-,0.00) -51(TGGCGGCT,+,0.00),148(AGACGCAT,-,0.00) 172(GCGGGGAGGGGG,-,0.00) 33(GAGCGCGCGCCC,+,0.00) 164(AGGGCGGGGC,-,0.00) 170(GGGCGGGGAGGG,-,0.00) -2(GGCGCGGC,-,0.00) 12(AGCTCCGCCC,-,0.00) -56(AGACATGGCGGC,-,0.00) -139(GCCGCGGAGC,+,0.00) 561_WT_peak_3552 chr19 892987 893279 + 80 NA promoter-TSS (NM_005481) promoter-TSS (NM_005481) 85 NM_005481 10025 Hs.365207 NM_005481 HPRD:06816 MED16 DRIP92|THRAP5|TRAP95 mediator complex subunit 16 protein-coding 0.123288 0.726962 97(GCCTCCGGGGCT,-,0.00) 65(CTGGGAGGGCGG,-,0.00) -35(CGTCCGCG,-,0.00) -86(CCCCCGCAGCCC,+,0.00) -162(CGCAGGCCCCGC,-,0.00),-3(GTCTGGCGCCGC,-,0.00) -143(GCGCCGCGTT,+,0.00) -154(CCGCCACG,-,0.00) -155(CCCGCCACGGCT,+,0.00) -146(GCTGCGCCGC,+,0.00),-146(GCTGCGCCGC,-,0.00),-86(CCCCCGCAGC,-,0.00) 561_WT_peak_4762 chr21 32090666 32090931 + 80 NA TTS (NM_001164435) TTS (NM_001164435) 297 NM_001164435 100288323 Hs.580877 NM_001164435 ENSG00000231068 KRTAP21-3 - keratin associated protein 21-3 protein-coding 0.007547 0.334586 561_WT_peak_7255 chr9 37079392 37079629 + 80 NA promoter-TSS (NR_036592) promoter-TSS (NR_036592) -383 NR_036592 100506710 Hs.446271 NR_036592 ENSG00000233137 EBLN3 - endogenous Bornavirus-like nucleoprotein 3 pseudo 0.088608 0.651261 15(GGCGTCCA,-,0.00) -5(CCGCCACG,-,0.00) 561_WT_peak_4375 chr2 177796600 177796971 + 80 NA Intergenic Intergenic -280637 NM_194247 220988 Hs.516539 NM_194247 ENSG00000170144 HNRNPA3 2610510D13Rik|D10S102|FBRNP|HNRPA3 heterogeneous nuclear ribonucleoprotein A3 protein-coding 0.008086 0.376344 -138(CTGTTTTG,-,0.00) 561_WT_peak_6686 chr7 65579702 65580071 + 80 NA promoter-TSS (NM_014478) promoter-TSS (NM_014478) 81 NM_014478 27297 Hs.300684 NM_014478 HPRD:12089 CRCP CGRP-RCP|CGRPRCP|RCP|RCP9 CGRP receptor component protein-coding 0.100271 0.659459 -76(GGTTCCGGGTCC,-,0.00) 13(GGCGGCGGAG,+,0.00) -42(CGGCGATCCCGG,+,0.00) 65(GGCGACGA,-,0.00) 186(CTCGTACG,+,0.00),188(CGTACGGG,-,0.00) -149(AAATCGGCCT,-,0.00) -66(CCGCCAAG,-,0.00),70(CGAGGCGG,+,0.00),98(CTTCTCGG,+,0.00) 561_WT_peak_6916 chr7 156686053 156686359 + 80 NA promoter-TSS (NM_022458) promoter-TSS (NM_022458) -304 NM_022458 64327 Hs.209989 NM_022458 HPRD:05700 LMBR1 ACHP|C7orf2|DIF14|PPD2|TPT|ZRS limb development membrane protein 1 protein-coding 0.065359 0.644951 -94(CGGGGAACGCGG,-,0.00) -109(GGCGTCGG,-,0.00) -107(CGTCGGAT,+,0.00) -162(CGGGGCTCCGCC,-,0.00) -159(GGCTCCGCCC,-,0.00) 561_WT_peak_6994 chr8 42010947 42011153 + 80 NA intron (NM_006803, intron 1 of 8) CpG 586 NM_006803 10947 Hs.654529 NM_006803 HPRD:09801 AP3M2 AP47B|CLA20|P47B adaptor-related protein complex 3, mu 2 subunit protein-coding 0.082524 0.710145 -131(AGGCCGCT,+,0.00),-48(AGGCCTCT,+,0.00) -117(CCCTCGCACCCC,+,0.00) -159(CCGGGGCCTGCG,+,0.00) -107(CCGGGCTGCCTG,+,0.00),-103(GCTGCCTGGCTG,+,0.00) 561_WT_peak_4997 chr3 9404635 9405181 + 80 NA 5' UTR (NM_015453, exon 1 of 10) 5' UTR (NM_015453, exon 1 of 10) 191 NM_015453 25917 Hs.443081 NM_015453 HPRD:15507 THUMPD3 - THUMP domain containing 3 protein-coding 0.071429 0.599634 105(GGCGCCGA,-,0.00) 132(TCGTGGCG,+,0.00) -15(GAGCTGAAAGGG,-,0.00),67(GGGGAGAGAGGG,-,0.00) 168(TTTACCCG,-,0.00) -17(GGGAGCTGAAAG,+,0.00) -116(CCGCCGCCAGCG,+,0.00),-105(GCGGAGCCACCG,+,0.00) -106(CGCGGAGCCACC,+,0.00) -65(GGGCGGCTTC,+,0.00) 133(CGTGGCGG,+,0.00) 561_WT_peak_3014 chr17 7358759 7358935 + 80 NA intron (NM_000747, intron 9 of 10) intron (NM_000747, intron 9 of 10) 10441 NM_000747 1140 Hs.330386 NM_000747 HPRD:01156 CHRNB1 ACHRB|CHRNB|CMS1D|CMS2A|SCCMS cholinergic receptor, nicotinic, beta 1 (muscle) protein-coding 0.034091 0.542373 -83(CGGAAGAAGCGG,+,0.00),-61(CGGAAGACGCTG,+,0.00) -78(GAAGCGGCCC,-,0.00) 561_WT_peak_382 chr1 112135467 112135747 + 80 NA Intergenic Intergenic 15333 NR_034126 100129269 Hs.689728 NR_034126 LINC01160 - long intergenic non-protein coding RNA 1160 ncRNA 0.014286 0.516014 -126(AAGTGGCT,+,0.00),-15(AGGTGGCT,+,0.00),47(AGGTGGCT,+,0.00) 80(GCGGGGAGCCGG,-,0.00) -157(CTGTTTTG,-,0.00) -32(GGGGTAAA,+,0.00) 81(CGGGGAGCCGGG,+,0.00) 561_WT_peak_6131 chr6 25138303 25138667 + 80 NA promoter-TSS (NR_002174) promoter-TSS (NR_002174) 135 NR_027626 8418 Hs.484918 NR_002174 CMAHP CMAH|CSAH cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene pseudo 0.024725 0.471233 561_WT_peak_7118 chr8 118533040 118533292 + 80 NA exon (NM_080651, exon 1 of 4) exon (NM_080651, exon 1 of 4) 214 NM_080651 90390 Hs.492612 NM_080651 HPRD:11631 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding 0.083333 0.687747 1(GGCGTCGC,-,0.00) -61(GGGATGGCGCCC,-,0.00) 3(CGTCGCTG,+,0.00) -96(GCCGCGCC,+,0.00) -69(CCGCGTCG,-,0.00) -94(CGCGCCATGTCC,+,0.00) 561_WT_peak_2567 chr15 78730158 78730513 + 80 NA promoter-TSS (NM_004136) promoter-TSS (NM_004136) -183 NM_004136 3658 Hs.436031 NM_004136 HPRD:08858 IREB2 ACO3|IRP2|IRP2AD iron-responsive element binding protein 2 protein-coding 0.092958 0.564607 -88(GATTCCGACCCT,-,0.00) -125(AAGCGGTT,+,0.00),-67(AGACACCT,-,0.00) 96(CGGCGCGA,-,0.00) 125(CCGCCCCTTCCC,-,0.00) 29(TAGCCACG,-,0.00) -163(CGTCTGAC,+,0.00),152(GTCCGACG,-,0.00) 89(GCGGCGACGGCG,+,0.00) 121(AGCTCCGCCC,-,0.00) 13(GCTGCGAAGG,+,0.00) 561_WT_peak_2417 chr15 31727124 31727501 + 80 NA Intergenic Intergenic 108229 NM_015995 51621 Hs.525752 NM_015995 HPRD:05620 KLF13 BTEB3|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding 0.034483 0.521164 -154(GGCGGGGG,+,0.00),-147(GCCGGGGG,+,0.00) -109(CAAAACCA,+,0.00) 92(GGGCGGGGCT,+,0.00) -61(CCGTCGCAGC,-,0.00) 561_WT_peak_6784 chr7 102066535 102066738 + 80 NA non-coding (NR_038967, exon 9 of 9) non-coding (NR_038967, exon 9 of 9) -7341 NM_001126340 80228 Hs.363308 NM_032831 HPRD:09860 ORAI2 C7orf19|CBCIP2|MEM142B|TMEM142B ORAI calcium release-activated calcium modulator 2 protein-coding 0.039409 0.602941 -95(CTACTCGG,+,0.00) 561_WT_peak_1346 chr11 65186416 65186800 + 80 NA Intergenic Intergenic -3661 NR_028272 283131 Hs.523789 NR_002802 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA 0.020833 0.612987 -150(AGAGGCCT,-,0.00) -58(GGGCCGAGAGGA,-,0.00),-26(AGGCTGGGAGGG,-,0.00) 93(GCTGCGAGGC,+,0.00) 561_WT_peak_6433 chr6 110501249 110501751 + 80 NA promoter-TSS (NM_015891) promoter-TSS (NM_015891) -124 NM_015891 51362 Hs.428147 NM_015891 HPRD:05721 CDC40 EHB3|PRP17|PRPF17 cell division cycle 40 protein-coding 0.055777 0.502982 -75(TCCTGCCG,+,0.00) 187(CTTCTTCTTCCG,-,0.00) 99(GCTTATTGTTTC,-,0.00) -153(GGGCGGGGTC,+,0.00) 561_WT_peak_5542 chr4 89204219 89204761 + 80 NA intron (NM_152542, intron 1 of 6) AluJb|SINE|Alu 1493 NM_152542 152926 Hs.43744 NM_152542 HPRD:15167 PPM1K BDP|MSUDMV|PP2Ckappa|PP2Cm|PTMP|UG0882E07 protein phosphatase, Mg2+/Mn2+ dependent, 1K protein-coding 0.038745 0.541436 2(GCCTCCGGGGCT,-,0.00) 212(TAGTCGCT,+,0.00) 41(CGGGTAAT,+,0.00) 274(GAGGCCTTGCTG,+,0.00) 561_WT_peak_3347 chr17 73900764 73901419 + 80 NA promoter-TSS (NM_032478) promoter-TSS (NM_032478) 90 NM_032478 64978 Hs.442609 NM_032478 HPRD:14758 MRPL38 L38MT|MRP-L3|MRP-L38|RPML3 mitochondrial ribosomal protein L38 protein-coding 0.100763 0.736280 -142(GGCGGCCCAG,+,0.00),327(GTCGGCCGCC,-,0.00) 160(AGACGCCT,-,0.00) 226(TAGACGCC,+,0.00) -85(GGGCGACAGCCC,+,0.00) 455(AGGGCTGGGC,-,0.00) 230(CGCCCGGC,-,0.00) -146(GTCCGGCG,-,0.00),250(CGTTGGAC,+,0.00) 462(GGCGCGGT,-,0.00) 107(AGCAGGCCCCGC,-,0.00),131(CCCCGGGCCCGC,-,0.00) 263(GGCGGAGCCGAG,+,0.00) 262(GGGCGGAGCC,+,0.00) 290(GCCCATGGCTGG,-,0.00),331(GCCGCCGGGGCC,+,0.00) 143(GCTGCGGAGC,+,0.00) 561_WT_peak_4289 chr2 128458907 128459245 + 80 NA 5' UTR (NM_032740, exon 1 of 1) 5' UTR (NM_032740, exon 1 of 1) 479 NM_032740 84826 Hs.345849 NM_032740 HPRD:14683 SFT2D3 - SFT2 domain containing 3 protein-coding 0.121302 0.716814 85(CGGCCCGGCGGC,+,0.00) 91(GGCGGCCGCG,+,0.00) -33(AACCGCTT,-,0.00) 117(CGGAGAAGGCGG,-,0.00) -58(CCGACCAA,+,0.00),-47(CCGCCCGA,+,0.00) -19(AGGGCCGGAA,-,0.00) -84(CGCAGGCCCTGC,-,0.00) 97(CGCGGAGCCGCT,+,0.00) 95(GCCGCGGAGC,+,0.00) 84(GCGGCCCGGCGG,+,0.00) 561_WT_peak_2000 chr13 40796060 40796264 + 80 NA Intergenic Intergenic -1523 NR_033877 400123 Hs.577960 NR_033877 LINC00548 - long intergenic non-protein coding RNA 548 ncRNA 0.019608 0.375610 -76(AGACGCAT,-,0.00) 561_WT_peak_5850 chr5 90676591 90676782 + 80 NA non-coding (NR_027435, exon 1 of 3) non-coding (NR_027435, exon 1 of 3) 522 NR_027435 100129716 Hs.116364 NR_027435 ARRDC3-AS1 - ARRDC3 antisense RNA 1 ncRNA 0.057592 0.598958 -149(CGGCAGGA,-,0.00) -5(GGGCTGGGTGGG,-,0.00) 561_WT_peak_2624 chr15 94749828 94750094 + 80 NA Intergenic Intergenic -91469 NM_001159643 55784 Hs.33368 NM_018349 HPRD:07738 MCTP2 - multiple C2 domains, transmembrane 2 protein-coding 0.011278 0.445693 561_WT_peak_5728 chr5 43121331 43121587 + 80 NA promoter-TSS (NM_003432) promoter-TSS (NM_003432) -137 NM_003432 7690 Hs.535804 NM_003432 ENSG00000172262 ZNF131 ZBTB35|pHZ-10 zinc finger protein 131 protein-coding 0.070312 0.677043 76(TCGGCGCC,+,0.00) 561_WT_peak_4585 chr20 24973526 24973740 + 80 NA promoter-TSS (NM_020531) promoter-TSS (NM_020531) -208 NM_020531 57136 Hs.472330 NM_020531 HPRD:09840 APMAP BSCv|C20orf3 adipocyte plasma membrane associated protein protein-coding 0.088785 0.632558 -96(GACTCCGGGGCC,-,0.00) -29(CCTTCGTCTCAC,-,0.00) 561_WT_peak_1374 chr11 65729237 65729420 + 80 NA exon (NM_005146, exon 1 of 20) exon (NM_005146, exon 1 of 20) 168 NM_005146 9092 Hs.502883 NM_005146 HPRD:10440 SART1 Ara1|HOMS1|SART1259|SNRNP110|Snu66 squamous cell carcinoma antigen recognized by T cells protein-coding 0.136612 0.701087 -114(GGCGGCCGGG,+,0.00) -109(CCGGGACGACGG,-,0.00) -108(CGGGACGA,-,0.00) -61(CGCGGCACCGGG,-,0.00) 561_WT_peak_1956 chr13 24828651 24828937 + 80 NA promoter-TSS (NR_046531) promoter-TSS (NR_046531) -217 NR_046531 100874231 Hs.577998 NR_046531 ENSG00000227213 SPATA13-AS1 - SPATA13 antisense RNA 1 ncRNA 0.020979 0.547038 561_WT_peak_5442 chr4 37828166 37828498 + 80 NA promoter-TSS (NM_018290) promoter-TSS (NM_018290) 50 NM_018290 55276 Hs.23363 NM_018290 HPRD:11761 PGM2 - phosphoglucomutase 2 protein-coding 0.105422 0.741742 -62(CCCGCCTCCGCC,+,0.00) -35(CGGGCCGGAAGG,+,0.00) 26(TGGCGGCT,+,0.00) -96(CGGACCGA,+,0.00) -64(CCCCCGCC,-,0.00),60(CGCCCGGC,-,0.00) 79(ACCGCCCA,+,0.00) -69(CCCCGCCCCCGC,-,0.00),139(GCGGGGCCGGGT,+,0.00) 21(AGCGATGGCGGC,-,0.00) -85(GCTCCGCCGC,-,0.00) 561_WT_peak_5685 chr5 34244966 34245397 + 80 NA Intergenic LTR12E|LTR|ERV1 -120548 NR_037951 100534612 Hs.171929 NR_037951 C1QTNF3-AMACR - C1QTNF3-AMACR readthrough (NMD candidate) ncRNA 0.092807 0.747685 -128(GGAGCAGGGTGA,-,0.00) 151(GGTTCCGGCCCG,-,0.00) -61(AGGTGGCT,+,0.00),36(AAGCCTCT,+,0.00) 60(CGGCGCCAGCCG,+,0.00) 69(CCGACCGC,+,0.00) -153(GGCGGGGG,+,0.00) 200(CCCGCTCAGGCC,+,0.00),250(GGGCTGAAAGGC,-,0.00) -77(CCCTTGCCCCGC,-,0.00),-31(GCGGCGCCGGCG,+,0.00),50(CCAGGGCCGGCG,+,0.00),59(GCGGCGCCAGCC,+,0.00),84(GCGGGGCGCGCC,+,0.00) 10(CCTCCGCAGC,-,0.00) 561_WT_peak_3625 chr19 11200803 11201007 + 80 NA intron (NM_001195799, intron 1 of 16) intron (NM_001195799, intron 1 of 16) 867 NM_001195800 3949 Hs.213289 NM_000527 HPRD:06091 LDLR FH|FHC|LDLCQ2 low density lipoprotein receptor protein-coding 0.083333 0.682927 13(ATCCGCTT,-,0.00) -149(CGCCCGGC,-,0.00),-72(CCCCCGCC,-,0.00) -153(ACCGCGCC,+,0.00) 28(CCCCAGGGCGCC,-,0.00) 561_WT_peak_7408 chr9 117670740 117670916 + 80 NA intron (NM_001252290, intron 2 of 4) intron (NM_001252290, intron 2 of 4) 22047 NM_001244 944 Hs.494901 NM_001244 TNFSF8 CD153|CD30L|CD30LG tumor necrosis factor (ligand) superfamily, member 8 protein-coding 0.011364 0.502825 -90(AGGTGGCT,+,0.00) 561_WT_peak_6547 chr6 160148686 160149133 + 80 NA intron (NM_001270531, intron 1 of 7) CpG 377 NM_001270533 9589 Hs.446091 NM_004906 HPRD:09259 WTAP - Wilms tumor 1 associated protein protein-coding 0.107383 0.712054 67(TCGAGGCC,+,0.00) -89(CGGACGCG,-,0.00) -32(AGGGGCGGGC,-,0.00) -45(CCCCCGGC,-,0.00) 254(CGGCACTA,-,0.00) 106(GGGTTGAGAGGG,-,0.00),174(GGGCTGAGCGGC,-,0.00) -38(CGGGTAAG,+,0.00) 219(CCTTCACCTCCC,-,0.00) -136(GGCGCGGC,-,0.00),-55(TGCGCAGC,-,0.00) -144(GTGGCGCCGGCG,+,0.00),-140(CGCCGGCGCGGC,-,0.00),-73(CCGGGGCCTGAG,+,0.00) 246(GGACCTGGCGGC,-,0.00) 181(GCGGCGGCGC,+,0.00) -108(GCGGGCCGGCTG,+,0.00) 561_WT_peak_4471 chr2 219263627 219263853 + 80 NA promoter-TSS (NM_182642) promoter-TSS (NM_182642) 679 NM_001206878 58190 Hs.444468 NM_021198 HPRD:05615 CTDSP1 NIF3|NLI-IF|NLIIF|SCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 protein-coding 0.084071 0.704846 -3(GCCGTCGA,-,0.00) -83(CGCGTGCG,+,0.00) -104(ACGGTCGG,-,0.00) 561_WT_peak_4163 chr2 85136111 85136318 + 80 NA Intergenic Intergenic 3451 NM_021103 9168 Hs.446574 NM_021103 HPRD:01779 TMSB10 MIG12|TB10 thymosin beta 10 protein-coding 0.004831 0.432692 561_WT_peak_7129 chr8 124054051 124054556 + 80 NA exon (NM_001134671, exon 1 of 8) exon (NM_001134671, exon 1 of 8) 360 NM_024295 79139 Hs.241576 NM_024295 HPRD:12302 DERL1 DER-1|DER1 derlin 1 protein-coding 0.110891 0.667984 234(AGGTGTCT,+,0.00) -32(TCCACGCC,+,0.00),85(GGCGGCGA,-,0.00) 62(CCGACCAA,+,0.00),180(CCGCCCGA,+,0.00) 192(CCGTGCCG,+,0.00) -125(CGCCGGAC,+,0.00),139(GTCCGACA,-,0.00) -137(CTAAACCG,+,0.00),175(CAAGACCG,+,0.00) -131(CGCCGGCGCCGG,-,0.00),215(GGCCGGCTCCGC,-,0.00) 216(GCCGGCTCCGCG,-,0.00) -146(GACCCCGCCC,-,0.00),50(AGGCCGAGTT,+,0.00) 209(CGACGCGG,+,0.00) 311(CAGCGAGGCAGC,-,0.00) 561_WT_peak_2050 chr13 50017937 50018197 + 80 NA promoter-TSS (NM_031915) promoter-TSS (NM_031915) 195 NM_001079670 81617 Hs.87159 NM_030925 HPRD:12993 CAB39L MO25-BETA|MO2L|bA103J18.3 calcium binding protein 39-like protein-coding 0.038462 0.582375 -101(AGGCCTCT,+,0.00) -91(TTTACCCC,-,0.00) 561_WT_peak_6197 chr6 27114886 27115160 + 80 NA promoter-TSS (NR_036096) promoter-TSS (NR_036096) 162 NM_080596 85235 Hs.352225 NM_080596 HPRD:13655 HIST1H2AH H2A/S|H2AFALii|H2AH|dJ86C11.1 histone cluster 1, H2ah protein-coding 0.083942 0.629091 -59(GGGCCGAGTG,+,0.00),62(AATGCGGCCC,-,0.00) -87(CTTCTCGG,+,0.00) -109(CGCGCCAAGGCC,+,0.00) 14(GCTGCGGTGC,+,0.00) 561_WT_peak_1112 chr10 99205460 99205656 + 80 NA promoter-TSS (NM_198046) promoter-TSS (NM_198046) 210 NM_016046 51013 Hs.632089 NM_016046 EXOSC1 CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13 exosome component 1 protein-coding 0.081633 0.609137 -50(CTGCCCTCCTCC,+,0.00) -151(ATGCCGCT,+,0.00) -99(AAGCGACG,-,0.00) -137(ACCGCGCC,+,0.00) -79(CGTGGCGG,+,0.00) -82(AGCCGTGGCGGG,-,0.00) 561_WT_peak_1796 chr12 92797562 92797955 + 80 NA Intergenic Intergenic -17549 NR_027932 574028 Hs.730377 NM_001025233 ENSG00000257127 CLLU1 - chronic lymphocytic leukemia up-regulated 1 protein-coding 0.007634 0.423858 -84(AGACACCT,-,0.00) 36(TGGTGCCG,+,0.00) 561_WT_peak_326 chr1 93426198 93426400 + 80 NA intron (NM_001252273, intron 1 of 4) intron (NM_001252273, intron 1 of 4) 780 NM_001252269 388650 Hs.180946 NM_001006605 HPRD:14204 FAM69A - family with sequence similarity 69, member A protein-coding 0.039604 0.507389 -104(AGCCACTA,-,0.00) 10(CGGCACGA,-,0.00) 561_WT_peak_3280 chr17 57906541 57907151 + 80 NA intron (NM_030938, intron 10 of 11) intron (NM_030938, intron 10 of 11) -11781 NR_029493 406991 Hs.444569 NR_029493 miRBase:MI0000077 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA 0.004918 0.392799 -55(GGGCTGAAAGGC,-,0.00) 561_WT_peak_3020 chr17 7590027 7590251 + 80 NA promoter-TSS (NM_001143991) promoter-TSS (NM_001143991) -619 NM_001143991 55135 Hs.408312 NM_018081 HPRD:07670 WRAP53 DKCB3|TCAB1|WDR79 WD repeat containing, antisense to TP53 protein-coding 0.053571 0.591111 -160(GCTGCCGGGCCT,-,0.00) -43(GCCGGGGG,+,0.00) -142(TTGCGACG,-,0.00) -118(CGGGCAAA,+,0.00) 23(GCTTGGGCTCCC,-,0.00) -48(GCGGAGCCGGGG,+,0.00) -49(AGCGGAGCCGGG,+,0.00) -127(TCGGCCTGGCGG,+,0.00),-40(GGGGGCTGCCTG,+,0.00) 561_WT_peak_4865 chr22 29196124 29196330 + 80 NA intron (NM_001079539, intron 1 of 5) CpG 333 NM_001079539 7494 Hs.437638 NM_005080 HPRD:01908 XBP1 TREB5|XBP-1|XBP2 X-box binding protein 1 protein-coding 0.087379 0.753623 -10(TCGCCCACCTCC,+,0.00) -73(CAGCCCCTGCCC,+,0.00) -79(CGCTCCCAGCCC,+,0.00) -143(CGCTGGCACCGA,-,0.00) 561_WT_peak_6016 chr5 171433687 171433950 + 80 NA promoter-TSS (NM_033645) promoter-TSS (NM_033645) 59 NM_012300 23291 Hs.484138 NM_012300 HPRD:07294 FBXW11 BTRC2|BTRCP2|FBW1B|FBXW1B|Fbw11|Hos F-box and WD repeat domain containing 11 protein-coding 0.072243 0.636364 4(GGCCTCGA,-,0.00) 15(CGCCACGA,-,0.00) -41(CGTAGGAC,+,0.00) 85(GGCAGCCCAAGG,+,0.00) -153(AGCAGGCGCCGC,-,0.00) 561_WT_peak_5919 chr5 133747514 133747838 + 79 NA promoter-TSS (NM_080656) promoter-TSS (NM_080656) -78 NM_080656 91368 Hs.156506 NM_080656 HPRD:14430 CDKN2AIPNL - CDKN2A interacting protein N-terminal like protein-coding 0.104938 0.713846 -153(AGCCGCCT,-,0.00) -99(CCGCCTTCCCGA,+,0.00) -5(CCCGGAGCGGCG,+,0.00) -151(CCGCCTCG,-,0.00) 4(GCGGCCTGCGGG,+,0.00) 561_WT_peak_5266 chr3 135914895 135915255 + 79 NA promoter-TSS (NM_018133) promoter-TSS (NM_018133) -387 NM_018133 55167 Hs.18631 NM_018133 HPRD:08550 MSL2 MSL-2|MSL2L1|RNF184 male-specific lethal 2 homolog (Drosophila) protein-coding 0.105556 0.706371 14(AGGCCTCT,+,0.00) -80(TCGCCGCC,+,0.00),25(GGCGGCGA,-,0.00),28(GGCGACGA,-,0.00) -43(TCGGTAGG,-,0.00) 80(CCCCCGCC,-,0.00) 93(CGTCGCTA,+,0.00) 125(CACTCTCACCCC,+,0.00) 51(CGGGCAAA,+,0.00) 153(CCTTCGCTTCCC,-,0.00) 158(GCTTCCCTTTTC,-,0.00) -130(GCCGCCCA,+,0.00) -143(GCCAGGCCCCGC,-,0.00),-101(CGCAGGCCCCTC,-,0.00) -138(GCCCCGCCGC,-,0.00),-108(GCCCCGCCGC,-,0.00),-83(GCCTCGCCGC,-,0.00) -145(CCGCCAGGCCCC,-,0.00),-115(CAGCAAGGCCCC,-,0.00) 561_WT_peak_1122 chr10 102881015 102881218 + 79 NA intron (NM_001085398, intron 2 of 2) intron (NM_001085398, intron 2 of 2) 9787 NM_001085398 100038246 Hs.662323 NM_001085398 ENSG00000236311 TLX1NB APT-B7|TD1|TDI TLX1 neighbor protein-coding 0.068966 0.656863 -67(GGCGCAGGGGGA,-,0.00) -44(AGAGGCCT,-,0.00) -96(GGCGTCGG,-,0.00) -1(CGCAGGCCGCGG,-,0.00) 561_WT_peak_7555 chrX 54071049 54071297 + 79 NA promoter-TSS (NM_015107) promoter-TSS (NM_015107) 396 NM_001184896 23133 Hs.133352 NM_015107 HPRD:06599 PHF8 JHDM1F|MRXSSD|ZNF422 PHD finger protein 8 protein-coding 0.056452 0.602410 -71(TCCCCCTCCTCC,+,0.00) -137(AGCCGCCA,-,0.00) -21(CCTCCTCCCCAG,+,0.00) 53(GGCGGGGG,+,0.00) -60(CGGGCAAA,+,0.00) -35(CCGACTCG,-,0.00) 561_WT_peak_1380 chr11 66278061 66278284 + 79 NA promoter-TSS (NM_024649) promoter-TSS (NM_024649) 53 NM_024649 582 Hs.502915 NM_024649 HPRD:01950 BBS1 BBS2L2 Bardet-Biedl syndrome 1 protein-coding 0.080717 0.647321 -28(AGGCCTCT,+,0.00) -109(ACGACGCC,+,0.00),-69(CCGACGCC,+,0.00) -130(AGGGCGGGGC,-,0.00) -57(GAGCTGAGAGGT,-,0.00) -71(TTCCGACG,-,0.00) -11(CGTGTAAA,+,0.00) -63(CCTGCGGAGC,+,0.00) 561_WT_peak_4565 chr20 10427729 10427973 + 79 NA intron (NM_001009608, intron 1 of 7) L1MD2|LINE|L1 11900 NM_001009608 128710 Hs.668782 NM_001009608 HPRD:12516 SLX4IP C20orf94|bA204H22.1|bA254M13.1|dJ1099D15.3 SLX4 interacting protein protein-coding 0.012295 0.412245 67(CAGTTTTG,-,0.00) 561_WT_peak_6849 chr7 134001623 134001890 + 79 NA promoter-TSS (NM_032826) promoter-TSS (NM_032826) 71 NM_032826 84912 Hs.490181 NM_032826 HPRD:11578 SLC35B4 YEA|YEA4 solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4 protein-coding 0.101124 0.667910 -61(GGCGTCCGAG,+,0.00),76(GGCGGCCGCG,+,0.00) -131(CCCGCGGC,-,0.00),80(GCCGCGGG,+,0.00) 57(CGGCATGA,-,0.00) -139(CCCCTTCTCCCG,-,0.00) -123(CAACACCG,+,0.00) 14(CCGCCAGGCAGC,-,0.00) 561_WT_peak_1246 chr11 34126971 34127483 + 79 NA 5' UTR (NM_024662, exon 1 of 29) 5' UTR (NM_024662, exon 1 of 29) 116 NM_001144030 55226 Hs.577281 NM_024662 HPRD:10964 NAT10 ALP|NET43 N-acetyltransferase 10 (GCN5-related) protein-coding 0.072266 0.608187 84(TGACCCGGACAC,+,0.00) 214(GCGGGAGGGCCG,-,0.00) 57(GCGTGCCG,+,0.00) 262(GGGTCGAGAGGG,-,0.00) 64(GCGGAGCCAGGC,+,0.00) 63(CGCGGAGCCAGG,+,0.00) 61(GCCGCGGAGC,+,0.00) 561_WT_peak_1907 chr12 123431445 123431678 + 79 NA intron (NM_001243013, intron 5 of 10) intron (NM_001243013, intron 5 of 10) 19495 NM_203444 23457 Hs.511951 NM_019624 HPRD:09262 ABCB9 EST122234|TAPL ATP-binding cassette, sub-family B (MDR/TAP), member 9 protein-coding 0.017167 0.576923 -37(TGGGCGGT,-,0.00) 561_WT_peak_1370 chr11 65655850 65656274 + 79 NA promoter-TSS (NM_004214) promoter-TSS (NM_004214) -52 NM_198897 9158 Hs.7768 NM_004214 HPRD:08492 FIBP FGFIBP|FIBP-1 fibroblast growth factor (acidic) intracellular binding protein protein-coding 0.094340 0.691765 -48(CCGGGAGCGCCG,-,0.00),95(CCGGGAGGGGGA,-,0.00) -123(GCGACGCC,+,0.00) -76(GGACTGGCGCGC,-,0.00) 82(CCGCTTCCTCCC,-,0.00) -125(TGGCGACG,-,0.00) 49(GGGAAGAGAGGG,-,0.00),230(CCTTCTCTGCCC,+,0.00) 120(GCGTCCTGTCTC,-,0.00) 68(TGCGCGGA,-,0.00) -130(GGTCATGGCGAC,-,0.00) 561_WT_peak_6497 chr6 141804825 141805137 + 79 NA Intergenic Intergenic 604955 NM_002511 4829 Hs.654478 NM_002511 HPRD:01211 NMBR BB1 neuromedin B receptor protein-coding 0.012821 0.399361 32(GGTGGAGGGTGA,-,0.00) -149(CTGTTTTG,-,0.00) 71(TGGGTAAA,+,0.00) -123(GCTTTCTCTTTC,-,0.00) 561_WT_peak_7636 chrY 1461387 1461629 + 79 NA promoter-TSS (NM_001636).2 promoter-TSS (NM_001636).2 -469 NM_001636 293 Hs.350927 NM_001636 SLC25A6 2|3|AAC3|ANT|ANT 2|ANT 3|ANT3|ANT3Y solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 protein-coding 0.140496 0.740741 46(GGCGCGGC,-,0.00) 561_WT_peak_1201 chr11 9285378 9285595 + 79 NA intron (NM_015213, intron 1 of 22) intron (NM_015213, intron 1 of 22) 1387 NM_001243254 23258 Hs.501857 NM_015213 HPRD:11475 DENND5A RAB6IP1 DENN/MADD domain containing 5A protein-coding 0.027650 0.385321 -92(CAAAACTG,+,0.00) 561_WT_peak_346 chr1 101759079 101759331 + 79 NA Intergenic Intergenic 47246 NR_046482 100873740 NR_046482 ENSG00000207116 RNU6-31P RNU6-31|RNU6-6 RNA, U6 small nuclear 31, pseudogene snRNA 0.003968 0.422925 561_WT_peak_1395 chr11 67981441 67981684 + 79 NA promoter-TSS (NM_016028) promoter-TSS (NM_016028) -323 NM_001300909 51111 Hs.632120 NM_016028 HPRD:11616 SUV420H1 CGI85|KMT5B suppressor of variegation 4-20 homolog 1 (Drosophila) protein-coding 0.111111 0.745902 -112(CATTCCGGTCCC,-,0.00) 15(CCCCCCTCCCGC,+,0.00) -124(CTTACGCG,-,0.00) 72(CGTTTTTG,-,0.00) -164(CCCGCGCCCCGC,-,0.00),-103(CCCGGTCCCCGC,-,0.00) -94(CGCGGGACCGCG,+,0.00),-94(CGCGGGACCGCG,-,0.00) 561_WT_peak_7495 chrX 2392440 2392753 + 79 NA intron (NM_145177, intron 1 of 6) intron (NM_145177, intron 1 of 6) 25984 NM_001171135 9189 Hs.131452 NM_004729 HPRD:02170 ZBED1 ALTE|DREF|TRAMP|hDREF zinc finger, BED-type containing 1 protein-coding 0.031949 0.538217 -155(ATGTGGCT,+,0.00) 561_WT_peak_5150 chr3 69261565 69261805 + 79 NA intron (NM_015123, intron 11 of 22) intron (NM_015123, intron 11 of 22) -89939 NM_198271 56203 Hs.350621 NM_198271 HPRD:13993 LMOD3 - leiomodin 3 (fetal) protein-coding 0.004167 0.360996 -33(CAAAACTG,+,0.00) 561_WT_peak_3959 chr2 9922289 9922404 + 79 NA Intergenic Intergenic -61225 NM_005680 9014 Hs.584833 NM_005680 HPRD:05363 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa protein-coding 0.017391 0.525862 -105(TTTACCCT,-,0.00) 561_WT_peak_5970 chr5 142785014 142785277 + 79 NA intron (NM_001018075, intron 1 of 8) intron (NM_001018075, intron 1 of 8) -1100 NM_001018076 2908 Hs.122926 NM_000176 HPRD:00679 NR3C1 GCCR|GCR|GR|GRL nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) protein-coding 0.068441 0.568182 -31(AAGCCTCT,+,0.00),20(AGCCGCCA,-,0.00) -157(CCCGCGGC,-,0.00) -89(AGGGTAAA,+,0.00) 561_WT_peak_659 chr1 186344215 186344909 + 79 NA promoter-TSS (NM_017847) promoter-TSS (NM_017847) -105 NM_003292 7175 Hs.279640 NM_003292 HPRD:08927 TPR - translocated promoter region, nuclear basket protein protein-coding 0.090778 0.650360 -134(CTGGGCCGCC,-,0.00) -140(AGACGCCT,-,0.00),347(TGGCGGCT,+,0.00),366(AGCCACTA,-,0.00),465(AGTCGCTT,-,0.00) 387(CCGGTAGGGCCG,-,0.00) -96(GCGCGCCCGCCC,+,0.00) 266(CGTACTCG,-,0.00) -112(TCGCTCGG,-,0.00),-3(GCGACCGA,+,0.00) -74(CCCGCGGC,-,0.00) 181(CCCTCTCAGCTT,+,0.00) 161(GGGAGCCCAATG,+,0.00) 224(ATCTCGGCCC,-,0.00) 418(CCGCCACG,-,0.00) 561_WT_peak_5081 chr3 44803062 44803496 + 79 NA promoter-TSS (NM_020242) promoter-TSS (NM_020242) 70 NM_020242 56992 Hs.658939 NM_020242 HPRD:10037 KIF15 HKLP2|KNSL7|NY-BR-62 kinesin family member 15 protein-coding 0.092166 0.604598 -3(GGCGTCAA,-,0.00) -161(CACGTACG,+,0.00) 162(CCCCCGGC,-,0.00) -89(TCGCGACG,-,0.00) 218(CCTCGGAC,+,0.00) -123(TGGGTAAA,+,0.00) 49(GGGCGGAATT,+,0.00) -100(CCGCGACG,-,0.00) -24(CAACATGGCGGC,-,0.00) 561_WT_peak_3845 chr19 49378389 49378601 + 79 NA intron (NM_014330, intron 2 of 2) intron (NM_014330, intron 2 of 2) 2846 NM_014330 23645 Hs.631593 NM_014330 HPRD:06572 PPP1R15A GADD34 protein phosphatase 1, regulatory subunit 15A protein-coding 0.018868 0.549296 -26(GGGGGCCGAG,+,0.00) -120(CCATCTCAGCCT,+,0.00) 561_WT_peak_7026 chr8 59323914 59324133 + 79 NA exon (NM_001077619, exon 1 of 8) exon (NM_001077619, exon 1 of 8) 200 NM_001077619 137886 Hs.155572 NM_001077619 ENSG00000215114 UBXN2B p37 UBX domain protein 2B protein-coding 0.132420 0.759091 -131(GGCGGAGGGCGG,-,0.00) -88(TCTTCCGGGCCG,-,0.00) -37(GCCGGGGG,+,0.00) -152(CGCCGCTA,+,0.00) -158(AGCGGGCGCCGC,-,0.00) -43(CGAGGAGCCGGG,+,0.00) 561_WT_peak_2460 chr15 45003220 45004451 + 79 NA intron (NM_004048, intron 1 of 3) CpG 150 NM_004048 567 Hs.534255 NM_004048 B2M - beta-2-microglobulin protein-coding 0.066613 0.598214 347(GCATTCGGGCCG,-,0.00) 1050(AAGCGGTT,+,0.00) 118(GGCGCCGA,-,0.00),313(GGCGTCGC,-,0.00),705(GGCGTCGA,-,0.00),874(GGCGTCGC,-,0.00) 562(GGGCTGGATCTC,-,0.00) 685(AGGGTCGGGA,-,0.00) 351(TCGGGCCG,+,0.00) 235(CGTCGCTG,+,0.00),707(CGTCGATA,+,0.00) 1053(CGGTTTCG,-,0.00) 883(CGGGTAAG,+,0.00) 457(CCTTCCTCTCCC,-,0.00),768(CCTCTGGCTCCC,-,0.00) 1008(GAAACAGCACGC,+,0.00) 821(GGCGCGGC,-,0.00) 353(GGGCCGAGAT,+,0.00) 542(CCCGCCGTGGGG,+,0.00) 561_WT_peak_2469 chr15 45879581 45879901 + 79 NA intron (NM_012388, intron 1 of 4) CpG 324 NM_012388 26258 Hs.7037 NM_012388 HPRD:16055 BLOC1S6 BLOS6|HPS9|PA|PALLID|PLDN biogenesis of lysosomal organelles complex-1, subunit 6, pallidin protein-coding 0.084375 0.685358 70(AAGCGGTT,+,0.00),80(TGGCGGCT,+,0.00) -39(CCGGGGAGCCGA,-,0.00) -31(CCGACGCC,+,0.00) 127(CCGCGCCGGCCC,+,0.00) 73(CGGTTTTT,-,0.00) -36(GGGAGCCGACGC,+,0.00) 126(ACCGCGCC,+,0.00) 0(GCGCGGCCCGGG,+,0.00),130(CGCCGGCCCCTC,-,0.00) -1(AGCGCGGCCC,-,0.00) 561_WT_peak_2245 chr14 61938983 61939229 + 79 NA intron (NM_006255, intron 9 of 13) intron (NM_006255, intron 9 of 13) 97806 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LOC101927780 - uncharacterized LOC101927780 ncRNA 0.004065 0.400810 -105(TTTACCAG,-,0.00) 561_WT_peak_7592 chrX 100663223 100663497 + 79 NA promoter-TSS (NM_000169) promoter-TSS (NM_000169) 239 NM_019597 3188 Hs.432485 NM_019597 HPRD:03022 HNRNPH2 FTP3|HNRPH'|HNRPH2|hnRNPH' heterogeneous nuclear ribonucleoprotein H2 (H') protein-coding 0.065693 0.614545 37(TCTCCCTCCTCC,+,0.00) -98(TTACCCGGTATC,+,0.00) -125(AGCCGTTT,-,0.00),69(AGCCGCCT,-,0.00) 63(CCGGGAAGCCGC,-,0.00) 59(AGTGCCGGGA,-,0.00) -115(GGGAAGAAGGAG,+,0.00),-5(CCGCCTCTTTCG,-,0.00) -99(ATTACCCG,-,0.00) 62(GCCGGGAAGC,+,0.00) 561_WT_peak_1531 chr11 130786152 130786454 + 79 NA promoter-TSS (NM_014758) promoter-TSS (NM_014758) 79 NM_014758 399979 Hs.444024 NM_014758 HPRD:18621 SNX19 CHET8 sorting nexin 19 protein-coding 0.149007 0.752475 8(GCAGCCGGGCCT,-,0.00),56(GCTTCCGGGTCG,-,0.00) -25(CTCTGCCGCC,-,0.00) 65(TCGACGTC,+,0.00),67(GACGTCGA,-,0.00) 99(CGTCCGCG,-,0.00) -82(CACACTCAGCCC,+,0.00) 114(CGAGGAGCGGCG,+,0.00) 3(GCTCCGCAGC,-,0.00) 9(CAGCCGGGCCTG,-,0.00) 561_WT_peak_5721 chr5 43020199 43020472 + 79 NA promoter-TSS (NR_104650) promoter-TSS (NR_104650) -590 NR_104650 648987 Hs.649468 NR_034085 ENSG00000177738 LOC648987 - uncharacterized LOC648987 ncRNA 0.047619 0.474453 -88(TCGGTCGT,-,0.00),83(TCTGTCGG,-,0.00) 561_WT_peak_2133 chr14 23355778 23355993 + 79 NA exon (NM_173527, exon 5 of 5) exon (NM_173527, exon 5 of 5) 3453 NM_173527 161253 Hs.444911 NM_173527 HPRD:08248 REM2 - RAS (RAD and GEM)-like GTP binding 2 protein-coding 0.116279 0.736111 -74(CGTCGGCC,+,0.00) -33(GGCGCGGT,-,0.00) -10(GCGGCGGGGC,+,0.00) 561_WT_peak_4274 chr2 114737204 114737473 + 79 NA non-coding (NR_034130, exon 1 of 1) non-coding (NR_034130, exon 1 of 1) 192 NR_034128 440900 Hs.662205 NR_034128 ENSG00000234199 LINC01191 VIN|lnc-ACTR3 long intergenic non-protein coding RNA 1191 ncRNA 0.133829 0.748148 -143(CGGCTGAGGGGG,-,0.00),-69(CGGCTGAGGGGG,-,0.00),5(CGGCTGAGGGGG,-,0.00) -112(CGCGCCCTGGCC,+,0.00),-110(CGCCCTGGCCGC,-,0.00),-38(CGCGCCCTGGCC,+,0.00),-36(CGCCCTGGCCGC,-,0.00),36(CGCGCCCTGGCC,+,0.00) -111(GCGCCCTGGCCG,+,0.00),-37(GCGCCCTGGCCG,+,0.00),37(GCGCCCTGGCCG,+,0.00) 561_WT_peak_6848 chr7 132766951 132767126 + 79 NA promoter-TSS (NM_017812) promoter-TSS (NM_017812) -210 NM_017812 54927 Hs.655010 NM_017812 HPRD:13044 CHCHD3 MINOS3|PPP1R22 coiled-coil-helix-coiled-coil-helix domain containing 3 protein-coding 0.068571 0.602273 -158(CGACCCGGATGC,+,0.00) -3(TGGTTTTG,-,0.00) -164(TTCACCCG,-,0.00) -75(GGCGCGGT,-,0.00) 561_WT_peak_5347 chr3 186490677 186490884 + 79 NA Intergenic CpG -10581 NM_001967 1974 Hs.518475 NM_001967 HPRD:03062 EIF4A2 BM-010|DDX2B|EIF4A|EIF4F|eIF-4A-II|eIF4A-II eukaryotic translation initiation factor 4A2 protein-coding 0.067633 0.658654 -56(CGACCCGGAAGT,+,0.00) -126(GGGCACGA,-,0.00) 3(TGGGCGGT,-,0.00) 561_WT_peak_6315 chr6 39082411 39082939 + 79 NA exon (NM_018322, exon 1 of 2) exon (NM_018322, exon 1 of 2) 190 NM_018322 55776 Hs.58382 NM_018322 HPRD:12892 SAYSD1 C6orf64 SAYSVFN motif domain containing 1 protein-coding 0.092803 0.671078 139(AACCGCTT,-,0.00) 323(GAGCGCGCGCCC,+,0.00) 302(CGCGTCCG,+,0.00) 260(CCGCCCGA,+,0.00) 8(CCCCCGGC,-,0.00) 176(CTGCTGCTTCCG,-,0.00) -94(CAAAACTG,+,0.00) 23(GCCGCGCC,+,0.00) 97(GGCTGGGCCCGG,-,0.00) 21(GGGCCGCGCC,+,0.00),241(AGACCCGCCC,-,0.00) 208(GCGCCCTGACTG,+,0.00),332(CCCGCAGGCCGC,-,0.00) 561_WT_peak_790 chr1 231558293 231558605 + 79 NA 5' UTR (NM_022051, exon 1 of 5) 5' UTR (NM_022051, exon 1 of 5) 2341 NM_022051 54583 Hs.444450 NM_022051 HPRD:06971 EGLN1 C1orf12|ECYT3|HIF-PH2|HIFPH2|HPH-2|HPH2|PHD2|SM20|ZMYND6 egl-9 family hypoxia-inducible factor 1 protein-coding 0.076923 0.603834 -103(GGAGGAGGGCGC,-,0.00) 8(AGGTGGCT,+,0.00) -97(GGGCGCCAGCCG,+,0.00) 86(CAAAACTG,+,0.00) 561_WT_peak_6749 chr7 92076864 92077080 + 79 NA non-coding (NR_052016, exon 1 of 6) non-coding (NR_052016, exon 1 of 6) 210 NR_052016 57798 Hs.21145 NM_021167 GATAD1 CMD2B|ODAG|RG083M05.2 GATA zinc finger domain containing 1 protein-coding 0.125000 0.746544 -51(GGCGGCCGGG,+,0.00) -134(AGCGGCCT,-,0.00),16(ATGCCGCT,+,0.00) -155(CCGCCTCCACGG,+,0.00) -141(CAGCGCCAGCGG,+,0.00) -2(CCGCCCGA,+,0.00) -107(CCGTGCCG,+,0.00) -142(GCAGCGCCAGCG,+,0.00),-10(CGCGGGGGCCGC,-,0.00) 561_WT_peak_7489 chr9 141020778 141020963 + 79 NA Intergenic TAR1|Satellite|telo -23695 NR_027156 643224 Hs.551805 NR_027156 TUBBP5 - tubulin, beta pseudogene 5 pseudo 0.059459 0.731183 -88(CCCGGCCGCC,-,0.00),-27(CCCGGCCGCC,-,0.00) -90(CCCCCGGC,-,0.00),-29(CCCCCGGC,-,0.00) -133(GGGCACGA,-,0.00) 561_WT_peak_2319 chr14 90187233 90187412 + 79 NA Intergenic Intergenic -101828 NM_001085471 1112 Hs.434286 NM_005197 HPRD:07533 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding 0.011173 0.505556 -142(GCTTCCGGCTTC,-,0.00) 561_WT_peak_4689 chr20 52210545 52210746 + 79 NA Intergenic CpG -11009 NM_006526 7764 Hs.155040 NM_006526 HPRD:04272 ZNF217 ZABC1 zinc finger protein 217 protein-coding 0.114428 0.747525 6(CGTCCGCG,-,0.00) -96(CCCCCGCC,-,0.00),-37(GGCGGGGG,+,0.00) -41(GCGGGGCGGGGG,+,0.00),13(GCGGGGACAGTG,+,0.00) -76(GGGCCGGGCT,+,0.00) 561_WT_peak_2511 chr15 64455484 64455740 + 79 NA promoter-TSS (NM_000942) promoter-TSS (NM_000942) -258 NM_000942 5479 Hs.434937 NM_000942 HPRD:00458 PPIB CYP-S1|CYPB|HEL-S-39|OI9|SCYLP peptidylprolyl isomerase B (cyclophilin B) protein-coding 0.074219 0.610895 -18(CTGTTTTG,-,0.00) -118(GGCCCGCCCCGC,-,0.00) -150(CCGAGAAG,-,0.00) -125(GCTCCGCGGC,-,0.00) 561_WT_peak_1699 chr12 51477349 51477553 + 79 NA promoter-TSS (NM_030809) promoter-TSS (NM_030809) 3 NM_030809 81566 Hs.524425 NM_030809 HPRD:12608 CSRNP2 C12orf2|C12orf22|FAM130A1|PPP1R72|TAIP-12 cysteine-serine-rich nuclear protein 2 protein-coding 0.107843 0.687805 -55(GTCTACGGGCCG,-,0.00) 23(AACCGGCT,+,0.00) -88(CTGACCGA,+,0.00) -97(CGGCACGT,-,0.00) -161(CAGAACCG,+,0.00),2(CAAAGCCG,+,0.00) 33(CGAGGCGG,+,0.00) -2(GCTGCAAAGC,+,0.00) -76(CGGGGCTGGCTG,+,0.00) 561_WT_peak_6873 chr7 140714256 140714816 + 79 NA promoter-TSS (NM_016071) promoter-TSS (NM_016071) -57 NM_016071 51650 Hs.416207 NM_016071 HPRD:17598 MRPS33 MRP-S33|PTD003|S33mt mitochondrial ribosomal protein S33 protein-coding 0.057143 0.515152 163(CCGCCCGA,+,0.00) 321(TCGTCCCG,+,0.00) 341(TCTACCCG,-,0.00) 242(GCAGCCATCGCC,+,0.00) 237(ACTTCGCAGC,-,0.00) 561_WT_peak_2915 chr16 78812027 78812331 + 79 NA intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 678869 NR_120435 51741 Hs.461453 NM_016373 HPRD:05501 WWOX D16S432E|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding 0.023026 0.475410 126(TGTCGGAC,+,0.00) 112(CGGTATTG,-,0.00) 561_WT_peak_6011 chr5 169064801 169065095 + 79 NA intron (NM_004946, intron 1 of 51) intron (NM_004946, intron 1 of 51) 697 NM_004946 1794 Hs.586174 NM_004946 HPRD:09121 DOCK2 - dedicator of cytokinesis 2 protein-coding 0.017007 0.603390 46(AAGCCTCT,+,0.00) 561_WT_peak_1758 chr12 68768007 68768298 + 79 NA Intergenic Intergenic -41991 NM_020128 56890 Hs.655702 NM_017440 HPRD:14376 MDM1 - Mdm1 nuclear protein homolog (mouse) protein-coding 0.013746 0.410959 -104(AGCCGCAT,-,0.00) 561_WT_peak_7608 chrX 123094577 123095403 + 79 NA promoter-TSS (NM_006603) promoter-TSS (NM_006603) -172 NM_001282418 10735 Hs.496710 NM_006603 HPRD:05077 STAG2 SA-2|SA2|SCC3B|bA517O1.1 stromal antigen 2 protein-coding 0.048426 0.603386 558(CGAGCCGTAGTC,+,0.00) 246(AAGTCGCT,+,0.00) 25(CCCGGAGGGCGC,-,0.00) -101(CCCCCGGC,-,0.00),206(CCCGCGGC,-,0.00),216(CCCCCGCC,-,0.00) 283(CCCCTTCCTCCC,-,0.00) 247(AGTCGCTA,+,0.00) 443(CGCGGAGCAGCG,+,0.00),612(CGCGGTGTCGCG,+,0.00) 144(GCCCCCATGGGG,+,0.00) 561_WT_peak_5870 chr5 108745267 108745763 + 79 NA intron (NM_014819, intron 1 of 9) CpG 160 NM_014819 9867 Hs.483036 NM_014819 HPRD:11436 PJA2 Neurodap1|RNF131 praja ring finger 2, E3 ubiquitin protein ligase protein-coding 0.104839 0.680080 210(AAGCGGCT,+,0.00),217(TGGCGGCT,+,0.00) 202(CGAACGCG,-,0.00) -155(TCTGTCGG,-,0.00) -28(AGGCCAGGGA,-,0.00),278(TCCCGCCCCT,+,0.00) 195(CCCCCGCC,-,0.00) -12(CCGCTCCTTCCG,-,0.00),253(CGGAAGCAGAGG,+,0.00) 298(TGGAGGCGAAGG,+,0.00) -116(GCGCGGCCCGGG,+,0.00),228(GCGGCGGCGGCG,+,0.00),231(GCGGCGGCGGCG,+,0.00) -117(AGCGCGGCCC,-,0.00) -48(CCCACCATGGCC,+,0.00) 126(GCTCCGGAGC,+,0.00),126(GCTCCGGAGC,-,0.00) -114(GCGGCCCGGGTC,+,0.00) 561_WT_peak_2704 chr16 14726495 14726652 + 79 NA promoter-TSS (NM_016561) promoter-TSS (NM_016561) -95 NM_016561 51283 Hs.435556 NM_016561 HPRD:16548 BFAR BAR|RNF47 bifunctional apoptosis regulator protein-coding 0.076433 0.620253 -37(AGGGGCGGGA,-,0.00) -128(GCCGCCCA,+,0.00) -33(GCGGGACCGGCG,+,0.00) 561_WT_peak_7532 chrX 47092240 47092338 + 79 NA promoter-TSS (NM_004651) promoter-TSS (NM_004651) -25 NM_004651 8237 Hs.171501 NM_004651 HPRD:02081 USP11 UHX1 ubiquitin specific peptidase 11 protein-coding 0.061224 0.545455 -122(TCGACGCG,+,0.00) -140(TTTACCCC,-,0.00) 561_WT_peak_2123 chr14 21944985 21945243 + 79 NA promoter-TSS (NM_014828) promoter-TSS (NM_014828) 18 NM_032846 84932 Hs.22399 NM_032846 HPRD:06312 RAB2B - RAB2B, member RAS oncogene family protein-coding 0.062016 0.575290 -101(GGTTCCGGGTCC,-,0.00),39(CTCCCCGGAATC,+,0.00) -76(AGCCACTT,-,0.00) -91(CCGCCCGA,+,0.00),56(TAGGTCGG,-,0.00) -7(CCCCCGCC,-,0.00) 26(CGTCTCTA,+,0.00) 1(CCTCCGGCTCCT,-,0.00) -10(GCTCCCCCGC,-,0.00) 561_WT_peak_6690 chr7 66205139 66205544 + 79 NA promoter-TSS (NM_014504) promoter-TSS (NM_014504) -302 NM_014504 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor (GEF) 1 protein-coding 0.081481 0.615764 214(CCGCCCTCTTCC,+,0.00) 125(CGTCGGAA,+,0.00) 201(TTTACCCC,-,0.00) 130(GAAGCCGGAAGC,+,0.00) 94(GCGGAGCCAGCG,+,0.00) -9(CCGCGAAG,-,0.00) 91(GCCGCGGAGC,+,0.00),183(GCTCCCCAGC,-,0.00) 561_WT_peak_4899 chr22 37252509 37252707 + 79 NA Intergenic CpG -4422 NM_013416 4689 Hs.474781 NM_000631 HPRD:03289 NCF4 NCF|P40PHOX|SH3PXD4 neutrophil cytosolic factor 4, 40kDa protein-coding 0.106061 0.638191 -30(AGCCGGTT,-,0.00) -1(CGGTGCCCCCGC,-,0.00) -108(GCTGCGGAGC,+,0.00) 561_WT_peak_1707 chr12 53715255 53715425 + 79 NA promoter-TSS (NM_001173466) promoter-TSS (NM_001173466) 72 NM_001173466 8086 Hs.369144 NM_015665 HPRD:05646 AAAS AAA|AAASb|ADRACALA|ADRACALIN|ALADIN achalasia, adrenocortical insufficiency, alacrimia protein-coding 0.117647 0.602339 -79(CGTATGCG,-,0.00) -46(CGAGGCGG,+,0.00) 561_WT_peak_7632 chrX 153991106 153991687 + 79 NA intron (NR_110022, intron 1 of 13) CpG 379 NM_001363 1736 Hs.4747 NM_001363 HPRD:02129 DKC1 CBF5|DKC|DKCX|NAP57|NOLA4|XAP101 dyskeratosis congenita 1, dyskerin protein-coding 0.108434 0.704467 0(GCTTCCGGGCCG,-,0.00) 30(CGGGGAACGGGG,-,0.00) 235(GCCGTCGA,-,0.00) -49(CGCACGCG,-,0.00),64(CGCGCACG,+,0.00) 110(CGCCCGGC,-,0.00) -54(CGGCACGC,-,0.00) 208(CCCTCTCACCTC,+,0.00) 276(CGTGGGAC,+,0.00) -140(TGCGCGGG,-,0.00),62(CCCGCGCA,+,0.00) 56(TCGGGGCCCGCG,+,0.00) 201(GGCTCGGCCC,-,0.00) 25(CGACTCGG,+,0.00),93(CGTGTCGG,+,0.00),367(CCGAGAAG,-,0.00) -102(GACCAAGGCGGC,-,0.00) -114(GCGGCCTGACGG,+,0.00),302(CTGCCAGCCCGG,-,0.00),306(CAGCCCGGACGC,-,0.00) 561_WT_peak_212 chr1 45265541 45266026 + 79 NA promoter-TSS (NM_004073) promoter-TSS (NM_004073) -253 NM_004073 1263 Hs.632415 NM_004073 HPRD:04222 PLK3 CNK|FNK|PRK polo-like kinase 3 protein-coding 0.080412 0.676955 162(CGAGGAGGCGGG,-,0.00) 289(CCGGGGAGGGGG,-,0.00) -89(GAGCGCCGCCCC,+,0.00),298(GGGCAGGCGTTC,-,0.00) 72(GGGGTGAGAGGC,-,0.00) -96(CAAAAGCG,+,0.00) -113(CGGGTAAC,+,0.00),-100(CGGGCAAA,+,0.00) 155(GGCGCGGC,-,0.00) -88(AGCGCCGCCC,-,0.00),33(AAAGAGGCCC,-,0.00) 106(GCGGCCTGGTTG,+,0.00),135(GCTGCCGGGCTG,+,0.00) 561_WT_peak_1147 chr10 112678470 112678903 + 78 NA promoter-TSS (NM_007373) promoter-TSS (NM_007373) 8 NM_001195306 92482 Hs.232543 NM_001195304 ENSG00000214413 BBIP1 BBIP10|BBS18|NCRNA00081|bA348N5.3 BBSome interacting protein 1 protein-coding 0.057737 0.566820 -145(AAAAACCG,+,0.00) -127(GAAGCGGCCC,-,0.00) 37(TCCGCCATGACC,+,0.00) 15(GCGGCCAGGCTA,+,0.00) 561_WT_peak_98 chr1 22379010 22379462 + 78 NA intron (NM_044472, intron 1 of 5) CpG 116 NM_044472 998 Hs.467637 NM_001791 HPRD:00309 CDC42 CDC42Hs|G25K cell division cycle 42 protein-coding 0.119469 0.752759 172(GGGCCCGGGAGC,+,0.00) 8(GGCAGCCGAG,+,0.00) 176(CCGGGAGCACGG,-,0.00),222(CCGGGCGGGCGC,-,0.00),274(CCGGGGAGGCAG,-,0.00) -152(CTGCGCCGGCCC,+,0.00),204(CGGCTCGCGCTG,-,0.00),224(GGGCGGGCGCGG,-,0.00) -139(CGCGTGCG,+,0.00),-137(CGTGCGCG,-,0.00) 260(GGCGGGGG,+,0.00) -82(CAGCCTCTTCCC,-,0.00) -93(TTGACCCG,-,0.00) -24(TGCGCGCT,-,0.00),23(CCCGCGCA,+,0.00) -121(GCGGAGCCAGGG,+,0.00),68(GCGGGGCCCGAG,+,0.00) 231(CGCGGGTCCGCG,+,0.00),231(CGCGGGTCCGCG,-,0.00) -123(GGGCGGAGCC,+,0.00),235(GGTCCGCGTT,+,0.00) 561_WT_peak_6516 chr6 151711031 151711248 + 78 NA intron (NM_020861, intron 1 of 2) CpG 1538 NM_020861 57621 Hs.520073 NM_020861 HPRD:10314 ZBTB2 ZNF437 zinc finger and BTB domain containing 2 protein-coding 0.096774 0.623853 -73(CCGGGAAGCAGC,-,0.00),-65(CAGCCTCCCCGC,+,0.00) -85(ACGACGCC,+,0.00) -19(GTCCCACG,-,0.00) -134(CGGCTTTG,-,0.00),28(CCAAACCG,+,0.00) -81(CGCCGGCCCCGG,-,0.00) 561_WT_peak_2077 chr13 77903974 77904159 + 78 NA Intergenic Intergenic -2889 NM_015057 23077 Hs.591221 NM_015057 HPRD:10104 MYCBP2 PAM MYC binding protein 2, E3 ubiquitin protein ligase protein-coding 0.064865 0.618280 -89(GCCGGGGG,+,0.00) -67(TGGGCGGC,-,0.00) -73(GCCGCCTGGGCG,+,0.00) -137(GCGGCCGGGCTG,+,0.00),-64(GCGGCTTGGGTG,+,0.00) 561_WT_peak_2543 chr15 72523572 72523946 + 78 NA promoter-TSS (NM_182471) promoter-TSS (NM_182471) -32 NM_182471 5315 Hs.534770 NM_002654 HPRD:01529 PKM CTHBP|HEL-S-30|OIP3|PK3|PKM2|TCB|THBP1 pyruvate kinase, muscle protein-coding 0.104278 0.706667 -151(CTCCGCCGCC,-,0.00) 86(AGCGACTT,-,0.00) -19(TCGGTGGG,-,0.00) -144(GCCCCGCCCT,+,0.00) -110(CCCGGGCCCCGC,-,0.00),-57(GCGGCGGCGGCG,+,0.00),-54(GCGGCGGCGGCG,+,0.00) -125(CCCGGCTCCGGG,-,0.00) 68(AACGGGGCCC,-,0.00) 129(CCGCCAAG,-,0.00) 58(GCGGCGGGGC,+,0.00) 561_WT_peak_5357 chr3 187520714 187521067 + 78 NA Intergenic Intergenic -57377 NM_001706 604 Hs.478588 NM_001706 HPRD:00180 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 B-cell CLL/lymphoma 6 protein-coding 0.028329 0.466102 0(TAGCCGCT,+,0.00) 18(CGTCACGA,-,0.00) 561_WT_peak_2620 chr15 93428114 93428294 + 78 NA intron (NR_037601, intron 2 of 5) intron (NR_037601, intron 2 of 5) 1678 NR_037602 100507217 Hs.622504 NR_037600 ENSG00000272888 LOC100507217 - uncharacterized LOC100507217 ncRNA 0.000000 0.342541 561_WT_peak_6851 chr7 134832213 134832394 + 78 NA promoter-TSS (NM_018295) promoter-TSS (NM_018295) -463 NM_018295 55281 Hs.521213 NM_018295 HPRD:07723 TMEM140 - transmembrane protein 140 protein-coding 0.011050 0.428571 561_WT_peak_6833 chr7 127291592 127291817 + 78 NA promoter-TSS (NM_014390) promoter-TSS (NM_014390) -498 NM_014390 27044 Hs.122523 NM_014390 HPRD:03714 SND1 TDRD11|p100 staphylococcal nuclease and tudor domain containing 1 protein-coding 0.062222 0.575221 7(CGGGTACG,+,0.00) -77(TCGGTAGG,-,0.00) 49(CCCTCCCAGGCC,+,0.00) -108(CGCGCGGCCGCG,+,0.00) 561_WT_peak_465 chr1 147806516 147806822 + 78 NA promoter-TSS (NR_049810) promoter-TSS (NR_049810) 9 NR_049810 100847044 NR_049810 MIR5087 - microRNA 5087 ncRNA 0.029412 0.465798 -100(GGGCGGAGAGGA,-,0.00) -18(CAAACCCG,+,0.00) 561_WT_peak_7176 chr8 144363546 144363999 + 78 NA promoter-TSS (NR_120682) promoter-TSS (NR_120682) 98 NR_120682 100507316 Hs.446671 NR_120682 LOC100507316 - uncharacterized LOC100507316 ncRNA 0.068433 0.612335 134(CAGACCGGAAGC,+,0.00) -139(AAGCGTTT,+,0.00) -23(GGCGTCGA,-,0.00) 81(TCTTGCCG,+,0.00) 153(AAAAACCG,+,0.00) 154(AAAACCGGAAGC,+,0.00) 44(CCCGCGCA,+,0.00) -83(GCTTCGCAGG,-,0.00),88(GGGGCGAAGC,+,0.00),192(CCTCCGCAGC,-,0.00) 561_WT_peak_5177 chr3 101280437 101280877 + 78 NA promoter-TSS (NM_017819) promoter-TSS (NM_017819) -23 NM_017819 54931 Hs.594839 NM_017819 HPRD:15240 TRMT10C HNYA|MRPP1|RG9MTD1 tRNA methyltransferase 10 homolog C (S. cerevisiae) protein-coding 0.072727 0.569161 -162(CTCGGCCGCC,-,0.00) 177(CGTCGGAG,+,0.00) -158(GCCGCCCA,+,0.00) 561_WT_peak_2016 chr13 42951888 42952153 + 78 NA Intergenic Intergenic 105731 NM_016248 11215 Hs.105105 NM_016248 HPRD:05261 AKAP11 AKAP-11|AKAP220|PPP1R44|PRKA11 A kinase (PRKA) anchor protein 11 protein-coding 0.007547 0.443609 561_WT_peak_4891 chr22 32145829 32146063 + 78 NA intron (NM_173566, intron 1 of 8) CpG 174 NM_173566 253143 Hs.438906 NM_173566 HPRD:14665 PRR14L C22orf30 proline rich 14-like protein-coding 0.085470 0.723404 -130(CCGAGAGGGCGG,-,0.00),-7(CCTCCTCCGCGG,+,0.00) 49(TCGTCGCC,+,0.00) -123(GGCGGGGG,+,0.00) 50(CGTCGCCA,+,0.00) -69(GGGCGGAGTGGG,-,0.00),20(CCAGCTCAGCCC,+,0.00) -1(CCGCGGCCCGCG,+,0.00),9(CGCTTGCCCAGC,-,0.00) 561_WT_peak_5792 chr5 68855784 68856191 + 78 NA promoter-TSS (NM_001098728) promoter-TSS (NM_001098728) -64 NM_001098728 728340 Hs.191356 NM_001098728 ENSG00000183474 GTF2H2C - GTF2H2 family member C protein-coding 0.098280 0.654412 -109(CTTTCCGGTTCT,-,0.00) 181(AGGCGGCT,+,0.00) 199(TCGTGGCG,+,0.00) 111(TAGCGGCG,-,0.00) 168(CGTCTGAC,+,0.00) 31(GGCGCGGC,-,0.00) 83(GGGCTGAGTT,+,0.00) 179(CTAGGCGG,+,0.00),200(CGTGGCGG,+,0.00) -151(GCTGCAGAGC,+,0.00) 561_WT_peak_3004 chr17 6330885 6331157 + 78 NA intron (NM_001033054, intron 2 of 4) intron (NM_001033054, intron 2 of 4) 7431 NM_001285402 23746 Hs.279887 NM_014336 HPRD:05092 AIPL1 AIPL2|LCA4 aryl hydrocarbon receptor interacting protein-like 1 protein-coding 0.014706 0.457875 -77(CAGCCTCTCCCG,-,0.00) 561_WT_peak_3579 chr19 3500532 3500742 + 78 NA promoter-TSS (NM_031304) promoter-TSS (NM_031304) -16 NM_031304 83475 Hs.515064 NM_031304 HPRD:14627 DOHH HLRC1|hDOHH deoxyhypusine hydroxylase/monooxygenase protein-coding 0.123810 0.706161 -160(TCGCCGCC,+,0.00),-62(GCGACGCC,+,0.00) 10(GCCGCGGG,+,0.00) -13(CCGTGCCG,+,0.00),-3(CGGCACCA,-,0.00) -115(CGTCGGCC,+,0.00) -64(CCGCGACG,-,0.00) -65(GCCGCGACGC,+,0.00) 561_WT_peak_4963 chr22 46449520 46449697 + 78 NA promoter-TSS (NR_027034) promoter-TSS (NR_027034) -118 NR_027034 150381 Hs.659113 NR_027034 PRR34-AS1 - PRR34 antisense RNA 1 ncRNA 0.067797 0.786517 -136(GCCGGGGG,+,0.00) 561_WT_peak_7205 chr9 6015415 6015674 + 78 NA promoter-TSS (NM_012416) promoter-TSS (NM_012416) 96 NM_001243202 26953 Hs.167496 NM_012416 HPRD:17953 RANBP6 - RAN binding protein 6 protein-coding 0.057915 0.534615 53(CCGGGAAGGAGG,-,0.00) 76(CGGCTCGA,-,0.00) -34(CTGGTAAA,+,0.00) 21(GCCGCCATTGCG,+,0.00) 561_WT_peak_3594 chr19 6425623 6425793 + 78 NA promoter-TSS (NM_003685) promoter-TSS (NM_003685) -886 NM_003685 8570 Hs.727344 NM_003685 HPRD:10350 KHSRP FBP2|FUBP2|KSRP KH-type splicing regulatory protein protein-coding 0.064706 0.631579 -51(TCGACCCC,+,0.00) -149(CGGCACGT,-,0.00) 561_WT_peak_6189 chr6 27099529 27099671 + 78 NA TTS (NM_021058) TTS (NM_021058) 975 NM_021058 8970 Hs.591807 NM_021058 HIST1H2BJ H2B/r|H2BFR|H2BJ histone cluster 1, H2bj protein-coding 0.028169 0.300699 561_WT_peak_190 chr1 39657848 39658114 + 78 NA intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 108142 NM_012090 23499 Hs.472475 NM_012090 HPRD:09750 MACF1 ABP620|ACF7|MACF|OFC4 microtubule-actin crosslinking factor 1 protein-coding 0.011278 0.471910 80(CAAAACCA,+,0.00) 561_WT_peak_6280 chr6 31633399 31633933 + 78 NA promoter-TSS (NM_001320) promoter-TSS (NM_001320) 9 NM_001320 1460 Hs.73527 NM_001320 HPRD:00278 CSNK2B CK2B|CK2N|CSK2B|G5A casein kinase 2, beta polypeptide protein-coding 0.082397 0.652336 119(GCGCCCTCCTCC,+,0.00) 125(TCCTCCGGGCCT,-,0.00) 358(TCGCCGCC,+,0.00) 152(CGTGCGCG,-,0.00) 327(GCGGTCGG,-,0.00) -3(TCCCCGCCCT,+,0.00) 33(CAAAACTG,+,0.00) -5(TTTCCCCG,-,0.00) -70(GCCGCGCC,+,0.00),154(TGCGCGGG,-,0.00) 337(CCGCGGCCTGCG,+,0.00) 561_WT_peak_4006 chr2 28582028 28582392 + 78 NA Intergenic Intergenic -33569 NM_005253 2355 Hs.220971 NM_005253 FOSL2 FRA2 FOS-like antigen 2 protein-coding 0.021978 0.569863 36(AAGTCTCT,+,0.00) -158(GAGCCCCAGCCC,+,0.00) -54(CTTCTCGG,+,0.00) 561_WT_peak_5430 chr4 25915847 25916180 + 78 NA exon (NM_001145432, exon 1 of 3) exon (NM_001145432, exon 1 of 3) 199 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52 small integral membrane protein 20 protein-coding 0.087087 0.637725 -116(CCGGGCGGTCGG,-,0.00) -23(TCGGCGCC,+,0.00) -112(GCGGTCGG,-,0.00) -117(GCCGGGCG,+,0.00) 105(TGGTGCCG,+,0.00) -142(CGTCGGTA,+,0.00) -81(GACGCCATGTCC,+,0.00) 561_WT_peak_6510 chr6 149554478 149554722 + 78 NA intron (NM_001292035, intron 1 of 5) L2c|LINE|L2 14841 NM_001292035 23118 Hs.269775 NM_015093 HPRD:05483 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding 0.008197 0.465306 22(AAGTGGTT,+,0.00) 561_WT_peak_1520 chr11 125384449 125384746 + 78 NA Intergenic L1MB7|LINE|L1 -18391 NM_022549 9638 Hs.224008 NM_005103 HPRD:09212 FEZ1 - fasciculation and elongation protein zeta 1 (zygin I) protein-coding 0.006734 0.416107 -7(GGCGGGGG,+,0.00) 561_WT_peak_4994 chr3 5229476 5229656 + 78 NA exon (NM_014674, exon 1 of 12) exon (NM_014674, exon 1 of 12) 207 NM_014674 9695 Hs.224616 NM_014674 HPRD:09644 EDEM1 EDEM ER degradation enhancer, mannosidase alpha-like 1 protein-coding 0.105556 0.696133 -125(GGGCTGGTGCTC,-,0.00),-74(GGGCTGGGGCCC,-,0.00) -31(GCTTCGGCTTCC,-,0.00) -3(CGACGGCCCCGC,-,0.00) 5(CCGCGTCG,-,0.00) 561_WT_peak_2764 chr16 29624609 29624956 + 78 NA non-coding (NR_002593, exon 1 of 1) non-coding (NR_002593, exon 1 of 1) 256 NR_002593 81893 Hs.677169 NM_031211 HPRD:13964 SLC7A5P1 DC49|LAT1-3TM|MLAS|hLAT1-3TM solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1 pseudo 0.141210 0.718391 138(CTCGGCCACC,-,0.00) -158(TCGCCGCC,+,0.00) -69(CAGCGCCAGCCC,+,0.00) -88(CGCACGCG,-,0.00),89(CGTCCGCG,-,0.00) -155(CCGCCCGA,+,0.00) -24(CGTCACGA,-,0.00) 111(CATCTTCTCCCG,-,0.00) 82(GCCGCGCC,+,0.00) 75(TGCCGGCGCCGC,-,0.00),86(CGCCGTCCGCGC,-,0.00) -131(CCCAGCTCCGCG,-,0.00) -86(CACGCGGCCC,-,0.00) -124(CCGCGTAG,-,0.00) 561_WT_peak_1672 chr12 47785330 47785558 + 78 NA Intergenic Intergenic -175218 NR_026544 100233209 Hs.657722 NR_026544 ENSG00000247774 PCED1B-AS1 - PCED1B antisense RNA 1 ncRNA 0.013158 0.567686 -16(GCTTCCCAGC,-,0.00) 561_WT_peak_6078 chr6 2940691 2940904 + 78 NA Intergenic LTR12E|LTR|ERV1 21607 NM_001271825 5269 Hs.519523 NM_004568 HPRD:01413 SERPINB6 CAP|DFNB91|MSTP057|PI-6|PI6|PTI|SPI3 serpin peptidase inhibitor, clade B (ovalbumin), member 6 protein-coding 0.046948 0.462617 -109(CGGCAGGA,-,0.00) 561_WT_peak_1495 chr11 117872960 117873457 + 78 NA Intergenic Intergenic 16102 NM_001558 3587 Hs.504035 NM_001558 HPRD:00911 IL10RA CD210|CD210a|CDW210A|HIL-10R|IL-10R1|IL10R interleukin 10 receptor, alpha protein-coding 0.012072 0.469880 96(TAGCGATG,-,0.00) 561_WT_peak_6186 chr6 26924475 26924747 + 78 NA promoter-TSS (NR_003504) promoter-TSS (NR_003504) -161 NR_026775 100133205 Hs.526951 NR_026775 ENSG00000224843 LINC00240 C6orf41|NCRNA00240|bA373D17.1 long intergenic non-protein coding RNA 240 ncRNA 0.113971 0.758242 91(GGTTCCGGCCCG,-,0.00) -123(AGGTGGCT,+,0.00),-26(AAGCCTCT,+,0.00) 0(CGGCGCCAGCCG,+,0.00) 9(CCGACCGC,+,0.00) -139(CCCTTGCCCCGC,-,0.00),-93(GCGGCGCCGGCG,+,0.00),-10(CCAGGGCCGGCG,+,0.00),-1(GCGGCGCCAGCC,+,0.00),24(GCGGGGCGCGCC,+,0.00) -52(CCTCCGCAGC,-,0.00) 561_WT_peak_7272 chr9 66458124 66458484 + 78 NA intron (NR_121647, intron 1 of 4) CpG 1015 NR_121647 103352539 Hs.351215 NR_121647 LINC01410 - long intergenic non-protein coding RNA 1410 ncRNA 0.086111 0.689751 41(TCGCCACCCCGG,+,0.00) -30(TAGACGCC,+,0.00) -93(TCCCGACCCT,+,0.00) -57(GCCGGGCG,+,0.00),54(GCCGCGGG,+,0.00) 48(CCCGGGGCCGCG,+,0.00) 3(AGCCCGGCCC,-,0.00) -16(GGCGCCTGGCTG,+,0.00),12(CAGCCAAGCCCG,-,0.00) 561_WT_peak_5690 chr5 35856793 35857293 + 78 NA promoter-TSS (NM_002185) promoter-TSS (NM_002185) 66 NR_120485 3575 Hs.591742 NM_002185 HPRD:00893 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding 0.002000 0.417166 185(AAGTGGCT,+,0.00) -62(ACTTCCTGTTTC,-,0.00) 561_WT_peak_1167 chr10 129091977 129092246 + 78 NA intron (NM_001380, intron 29 of 51) intron (NM_001380, intron 29 of 51) -97689 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 FAM196A C10orf141 family with sequence similarity 196, member A protein-coding 0.014870 0.500000 5(CAAAACCA,+,0.00) 61(CCGCCTAG,-,0.00) 561_WT_peak_3090 chr17 26926364 26926625 + 78 NA promoter-TSS (NM_006461) promoter-TSS (NM_006461) 343 NR_040012 100506436 Hs.743630 NR_040012 SPAG5-AS1 - SPAG5 antisense RNA 1 ncRNA 0.061303 0.610687 -73(AGCGGCTT,-,0.00) -47(CGCGTCCG,+,0.00) 561_WT_peak_7326 chr9 88897015 88897418 + 78 NA intron (NM_030940, intron 1 of 3) CpG 274 NM_030940 81689 Hs.449291 NM_030940 HPRD:17091 ISCA1 HBLD2|ISA1|hIscA iron-sulfur cluster assembly 1 protein-coding 0.133995 0.730198 -107(GTTTCCGGGGCC,-,0.00),-53(GGGGCCGGAGGC,+,0.00) 35(CCCGGCCGCC,-,0.00) 197(TCGCCGTCCCGG,+,0.00) -35(GGCGGCGA,-,0.00),-8(GCGACGCC,+,0.00) -143(CGCACGCG,-,0.00) 221(TCGGGCCG,+,0.00) -10(GAGCGACG,-,0.00) 3(GTCTGACG,-,0.00) -48(CGGAGGCGAAGG,+,0.00) 143(GCTTCCTCTTGC,-,0.00) 82(CACGGGCCCCGC,-,0.00) -87(AGCCCCGCCC,-,0.00) 39(GCCGCCGTGACC,+,0.00) -34(GCGGCGAGGC,+,0.00),87(GCCCCGCCGC,-,0.00) -127(GCGGCCTGACGG,+,0.00),-34(GCGGCGAGGCTG,+,0.00) 561_WT_peak_7349 chr9 95056241 95056414 + 78 NA promoter-TSS (NM_013417) promoter-TSS (NM_013417) -289 NM_013417 3376 Hs.445403 NM_002161 HPRD:02832 IARS IARS1|ILERS|ILRS|IRS|PRO0785 isoleucyl-tRNA synthetase protein-coding 0.052023 0.500000 -10(AGGTGGCT,+,0.00) -118(GGCGCCGA,-,0.00) 561_WT_peak_5634 chr4 164415584 164416207 + 78 NA 5' UTR (NM_018352, exon 1 of 7) 5' UTR (NM_018352, exon 1 of 7) 222 NM_018352 55319 Hs.267446 NM_018352 HPRD:07739 TMA16 C4orf43 translation machinery associated 16 homolog (S. cerevisiae) protein-coding 0.081862 0.639423 436(TCGCCTTGCTCC,+,0.00) -155(GGGGCCGGAAGC,+,0.00) -140(TAGCGTCT,+,0.00),359(AAGCCTCT,+,0.00) 408(CGCGTCCG,+,0.00) 74(TGGGTCGG,-,0.00),238(TCGGTTGG,-,0.00) 270(AGGCAGAGAGGG,-,0.00) 288(CGGTTTCG,-,0.00) 217(CCTCCTGCTCCC,-,0.00) 33(GGGACGCTTT,+,0.00) 353(GGGGCGAAGC,+,0.00) 561_WT_peak_6539 chr6 159240557 159240836 + 78 NA promoter-TSS (NM_001111077) promoter-TSS (NM_001111077) -240 NM_001111077 7430 Hs.487027 NM_003379 HPRD:00475 EZR CVIL|CVL|HEL-S-105|VIL2 ezrin protein-coding 0.075269 0.646429 -46(GGGGCCGGGA,-,0.00) 30(GGCCGGCCCAGC,-,0.00) 561_WT_peak_3814 chr19 46421069 46421276 + 78 NA Intergenic MER20B|DNA|hAT-Charlie -3136 NM_001029861 339345 Hs.434218 NM_001029861 HPRD:18784 NANOS2 NOS2 nanos homolog 2 (Drosophila) protein-coding 0.000000 0.418269 561_WT_peak_5201 chr3 111262719 111262840 + 78 NA intron (NM_198196, intron 1 of 14) intron (NM_198196, intron 1 of 14) 1853 NM_198196 10225 Hs.142023 NM_005816 HPRD:06916 CD96 TACTILE CD96 molecule protein-coding 0.008264 0.500000 561_WT_peak_4086 chr2 61404678 61404874 + 78 NA 5' UTR (NM_152392, exon 1 of 6) 5' UTR (NM_152392, exon 1 of 6) 221 NM_152392 130872 Hs.655602 NM_152392 HPRD:16479 AHSA2 Hch1 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast) protein-coding 0.091837 0.776650 -130(GGAGGAGCGGGA,-,0.00) -124(GCGGGAGGACGG,-,0.00),-72(CCTCCTTCCGGG,+,0.00) -94(GCGCTGGCGCGG,-,0.00) -52(AGGGCCGGGC,-,0.00) -44(GCCGCGGG,+,0.00),-7(GCCGCGGG,+,0.00) -89(GGCGCGGC,-,0.00) -160(GTGGGGCCAGGG,+,0.00),-93(CGCTGGCGCGGC,-,0.00),-12(GCGGGGCCGCGG,+,0.00),-4(GCGGGGCCAGGG,+,0.00) -13(TGCGGGGCCGCG,+,0.00) -7(GCCGCGGGGC,+,0.00) -51(GGGCCGGGCCGC,-,0.00) 561_WT_peak_4619 chr20 35224184 35224418 + 78 NA intron (NM_001199535, intron 2 of 4) intron (NM_001199535, intron 2 of 4) -9836 NM_001199534 55969 Hs.584985 NM_018840 HPRD:12761 C20orf24 RIP5 chromosome 20 open reading frame 24 protein-coding 0.017094 0.446809 -100(AAGTGTCT,+,0.00),-22(ATGTGGCT,+,0.00) 561_WT_peak_7092 chr8 101965424 101965620 + 78 NA promoter-TSS (NM_001135699) promoter-TSS (NM_001135699) 101 NM_003406 7534 Hs.492407 NM_003406 HPRD:03183 YWHAZ 14-3-3-zeta|HEL-S-3|HEL4|KCIP-1|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta protein-coding 0.051020 0.553299 14(CGGAAGAAGGGG,+,0.00) 561_WT_peak_3823 chr19 47987567 47987787 + 78 NA promoter-TSS (NM_007059) promoter-TSS (NM_007059) 138 NR_038452 100505681 Hs.657320 NR_038452 ENSG00000268061 NAPA-AS1 - NAPA antisense RNA 1 ncRNA 0.045455 0.561086 -162(CGGCCAGGTCGC,-,0.00) 561_WT_peak_6937 chr8 20123215 20123388 + 78 NA Intergenic Intergenic -9983 NR_047509 100874051 Hs.385799 NR_047509 ENSG00000253733 LZTS1-AS1 - LZTS1 antisense RNA 1 ncRNA 0.005780 0.568966 -56(AGGGCAGGAA,-,0.00) 561_WT_peak_2928 chr16 82957777 82957918 + 78 NA intron (NM_001220490, intron 2 of 12) intron (NM_001220490, intron 2 of 12) 66056 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA 0.007092 0.380282 -126(CAAAACAG,+,0.00) 561_WT_peak_3049 chr17 15902725 15903066 + 78 NA exon (NM_001042698, exon 1 of 6) exon (NM_001042698, exon 1 of 6) 111 NM_001042698 125150 Hs.593985 NM_001042697 ENSG00000214941 ZSWIM7 SWS1 zinc finger, SWIM-type containing 7 protein-coding 0.140762 0.742690 110(GGGGCAGGGCGA,-,0.00) -152(AGGCCCGGACAC,+,0.00),-114(GTGCCCGGATGC,+,0.00) -133(CCTGCCTCCCGG,+,0.00) 150(CGCGTGCG,+,0.00) -127(TCCCGGCCCG,+,0.00) 102(CCCCCGCC,-,0.00) 19(TCGCGCCG,+,0.00) 47(CGGCGGAC,+,0.00) -7(CACAACCG,+,0.00) 57(CCGCGACG,-,0.00) -95(GCGCCCATGGCG,+,0.00),-93(GCCCATGGCGCA,-,0.00),14(GGCCATCGCGCC,-,0.00) 56(GCCGCGACGC,+,0.00) -125(CCGGCCCGGCGG,+,0.00) 561_WT_peak_129 chr1 27070668 27070855 + 78 NA intron (NM_006015, intron 4 of 19) intron (NM_006015, intron 4 of 19) -43693 NM_017837 55650 Hs.259605 NM_017837 HPRD:07912 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis, class V protein-coding 0.010695 0.526596 -160(ATCCGCTT,-,0.00),-37(TAGTCGCT,+,0.00) -54(ATTTCCTGTTTC,-,0.00) -60(GGGCCCATTT,+,0.00) 561_WT_peak_4371 chr2 174904662 174904815 + 78 NA Intergenic Intergenic -74308 NM_003111 6670 Hs.531587 NM_003111 HPRD:03483 SP3 SPR2 Sp3 transcription factor protein-coding 0.019608 0.435065 -70(CAAAACAG,+,0.00) 561_WT_peak_6864 chr7 138818384 138818643 + 78 NA promoter-TSS (NM_001144923) promoter-TSS (NM_001144923) 23 NM_001144923 79989 Hs.133020 NM_024926 HPRD:07776 TTC26 DYF13|dyf-13 tetratricopeptide repeat domain 26 protein-coding 0.092664 0.592308 61(TAGTGGCT,+,0.00) -97(GCCGCGGG,+,0.00) -123(CGGCAGAAGCTG,+,0.00) 43(GACCGACG,-,0.00) 40(CAAGACCG,+,0.00) -107(GAACCAAGAAGC,+,0.00) 9(GGCGCGGC,-,0.00) 3(CGCTGAGGCGCG,+,0.00) 561_WT_peak_3432 chr18 9914286 9914475 + 78 NA intron (NM_194434, intron 1 of 5) CpG 425 NM_003574 9218 Hs.165195 NM_003574 HPRD:09299 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa protein-coding 0.116402 0.747368 -40(CGTCCGCG,-,0.00) -61(GGCGGGGG,+,0.00) -35(GCGGCCCTGGCC,+,0.00) 561_WT_peak_5226 chr3 120460951 120461305 + 78 NA promoter-TSS (NM_005513) promoter-TSS (NM_005513) 256 NM_173825 285282 Hs.444360 NM_173825 HPRD:15203 RABL3 - RAB, member of RAS oncogene family-like 3 protein-coding 0.062147 0.552113 156(AAGTGTCT,+,0.00),183(AAGCCGCT,+,0.00) 10(ACGACGCC,+,0.00) -18(CCCGGGCTCCGC,-,0.00) -17(CCGGGCTCCGCG,-,0.00) -34(CCGCGAAG,-,0.00),25(CCGCGTCG,-,0.00) 561_WT_peak_935 chr10 30971498 30971769 + 78 NA Intergenic Intergenic -9570 NR_036438 645954 Hs.408581 NR_036438 ENSG00000234814 SVILP1 - supervillin pseudogene 1 pseudo 0.018450 0.415441 561_WT_peak_7419 chr9 127177461 127177884 + 78 NA promoter-TSS (NM_002799) promoter-TSS (NM_002799) 80 NM_002799 5695 Hs.213470 NM_002799 HPRD:04940 PSMB7 Z proteasome (prosome, macropain) subunit, beta type, 7 protein-coding 0.059102 0.594340 -163(AGACCCGGCTTC,+,0.00) 71(AGCCGCCA,-,0.00) 141(GGCGTCGC,-,0.00) -107(GCCGCGGG,+,0.00) 143(CGTCGCTG,+,0.00) 158(GGGCTGAAGGGG,-,0.00) 156(GGGGGCTGAAGG,+,0.00) -98(CACAGGCCCCGC,-,0.00) 561_WT_peak_3761 chr19 39926418 39926607 + 78 NA exon (NM_001020, exon 1 of 5) exon (NM_001020, exon 1 of 5) 106 NM_001020 6217 Hs.397609 NM_001020 HPRD:04724 RPS16 S16 ribosomal protein S16 protein-coding 0.079365 0.668421 -161(CCCACCGA,+,0.00) -89(GTCCGAAG,-,0.00) -130(CCTTCCCCTCCC,-,0.00) -15(CGCGGCGCCGCA,+,0.00),-15(CGCGGCGCCGCA,-,0.00) 561_WT_peak_2599 chr15 90436961 90437138 + 78 NA intron (NM_001199058, intron 5 of 9) CpG 568 NR_023361 10239 Hs.632161 NM_005829 HPRD:03880 AP3S2 AP3S3|sigma3b adaptor-related protein complex 3, sigma 2 subunit protein-coding 0.073446 0.629213 -31(GAAGCCGGGCCG,-,0.00) -88(GGCGCCGA,-,0.00) -30(AAGCCGGGCCGC,-,0.00) 561_WT_peak_2129 chr14 23057871 23058247 + 78 NA promoter-TSS (NM_001344) promoter-TSS (NM_001344) 84 NM_001344 1603 Hs.82890 NM_001344 HPRD:02589 DAD1 OST2 defender against cell death 1 protein-coding 0.087766 0.591512 130(CCGCCCTCCCCG,+,0.00),131(CGCCCTCCCCGG,+,0.00) 16(CCGACGCC,+,0.00) -62(GGTACGCG,-,0.00) 14(TACCGACG,-,0.00) 126(AACTCCGCCC,-,0.00) 171(GGCCAGGGCGCG,-,0.00) 170(CGGCCAGGGCGC,-,0.00) 561_WT_peak_4555 chr20 4795388 4795677 + 78 NA intron (NM_014737, intron 2 of 11) intron (NM_014737, intron 2 of 11) 237 NM_170774 9770 Hs.631504 NM_014737 HPRD:15218 RASSF2 CENP-34|RASFADIN Ras association (RalGDS/AF-6) domain family member 2 protein-coding 0.027682 0.565517 37(AGGCGGCT,+,0.00) 561_WT_peak_3855 chr19 49990715 49991194 + 78 NA promoter-TSS (NR_026712) promoter-TSS (NR_026712) 89 NR_026712 728658 Hs.645344 NR_026712 ENSG00000236552 RPL13AP5 RPL13A_8_1086|bA196N24.2 ribosomal protein L13a pseudogene 5 pseudo 0.064718 0.572917 -7(AAGCGGCT,+,0.00) -154(CCGCCTTCCCTG,+,0.00) -131(CGCACGCG,-,0.00),-90(CGTCCGCG,-,0.00) -26(CAAAACCT,+,0.00) -102(AACACAGGAAGC,+,0.00) -88(TCCGCGCA,+,0.00) -86(CGCGCAACCGCG,+,0.00) 39(GGCCGGGGCGGC,-,0.00) 561_WT_peak_1747 chr12 62654100 62654742 + 77 NA TTS (NR_106740) TTS (NR_106740) 281 NR_106740 102465133 NR_106740 MIR6125 hsa-mir-6125 microRNA 6125 ncRNA 0.087227 0.604977 452(GGCGTCCA,-,0.00) -116(GCGTGCCG,+,0.00),268(TCGTGCGG,+,0.00),300(TAGTGCCG,+,0.00) -104(CGTCGCTG,+,0.00),-22(TCGCGACG,-,0.00) -146(CGTGGGAC,+,0.00),121(GTCCGGCG,-,0.00) -9(CAAAACCT,+,0.00),258(CGGTTCTG,-,0.00),369(CCGTTTTG,-,0.00) 135(GCCGGGGCAGCG,+,0.00),245(GCGGCGGCGGCG,+,0.00),248(GCGGCGGCGGCG,+,0.00) -59(GGCGGAGCGGCG,+,0.00),239(CGGGGAGCGGCG,+,0.00),383(CCCGGTGCCGCG,+,0.00) 561_WT_peak_3468 chr18 21599537 21599881 + 77 NA intron (NM_001135993, intron 1 of 13) MER58A|DNA|hAT-Charlie -4285 NR_110796 102724246 Hs.569872 NR_110796 LOC102724246 - uncharacterized LOC102724246 ncRNA 0.008721 0.437681 561_WT_peak_6862 chr7 138779965 138780327 + 77 NA intron (NM_024625, intron 1 of 8) intron (NM_024625, intron 1 of 8) 14319 NM_020119 56829 Hs.133512 NM_020119 HPRD:09534 ZC3HAV1 ARTD13|FLB6421|PARP13|ZAP|ZC3H2|ZC3HDC2 zinc finger CCCH-type, antiviral 1 protein-coding 0.027624 0.495868 106(GAGCCCCAGCTC,+,0.00) 561_WT_peak_3041 chr17 8150950 8151419 + 77 NA intron (NR_046431, intron 1 of 21) CpG 229 NR_046431 80169 Hs.156055 NM_025099 CTC1 AAF-132|AAF132|C17orf68|CRMCC|tmp494178 CTS telomere maintenance complex component 1 protein-coding 0.053305 0.580851 -146(AGACGCTT,-,0.00),232(AGCCGCCA,-,0.00) 268(GGGCAGGTGCTC,-,0.00) 100(CGGACGCG,-,0.00) 68(CGGACCGA,+,0.00) 137(GAAATAGGAAGA,+,0.00) 11(AGCGGGCGCCGC,-,0.00) 251(AGCTCCGCCC,-,0.00) 233(GCCGCCATGATG,+,0.00) 561_WT_peak_4342 chr2 158325792 158326036 + 77 NA Intergenic Intergenic -25310 NM_004288 9595 Hs.270 NM_004288 HPRD:09192 CYTIP B3-1|CASP|CYBR|CYTHIP|HE|PSCDBP cytohesin 1 interacting protein protein-coding 0.012295 0.379592 21(CATAACCG,+,0.00) -116(CCTTCTTCTCCC,-,0.00) 561_WT_peak_4546 chr20 2820815 2821244 + 77 NA promoter-TSS (NM_080413) promoter-TSS (NM_080413) -314 NM_080413 64601 Hs.269577 NM_022575 HPRD:12259 VPS16 hVPS16 vacuolar protein sorting 16 homolog (S. cerevisiae) protein-coding 0.123543 0.725581 -163(CCGCCGTCCCGC,+,0.00) 113(TCGGCGCC,+,0.00) 238(AGGGCTGGGC,-,0.00) 82(CGTCGCTG,+,0.00) -6(CGGTTCTG,-,0.00) -100(TTCACCCG,-,0.00) -156(CCCGCGCA,+,0.00) 7(CTCCCGCCCCGC,-,0.00) -115(CGGGGCTCCGCG,-,0.00) 251(CTTGGCGG,+,0.00) 125(GCTGCGACGC,+,0.00) 561_WT_peak_3824 chr19 48103848 48104084 + 77 NA Intergenic CpG -7487 NM_015711 29998 Hs.97244 NM_015711 HPRD:09296 GLTSCR1 - glioma tumor suppressor candidate region gene 1 protein-coding 0.110169 0.691983 0(CGCCCCGGCATC,+,0.00) -118(TGGCGGCT,+,0.00),-36(AGCCGCAT,-,0.00) -147(AGGGCTGGGC,-,0.00) -121(TCGTGGCG,+,0.00) 16(CCCTCTCATCCC,+,0.00) -120(CGTGGCGG,+,0.00),42(CCGCCTAG,-,0.00) 561_WT_peak_5135 chr3 57678387 57678561 + 77 NA intron (NM_152678, intron 1 of 19) CpG 342 NM_152678 201627 Hs.91085 NM_152678 HPRD:08756 DENND6A AFI1A|FAM116A DENN/MADD domain containing 6A protein-coding 0.109195 0.760000 -17(TCGAAGCC,+,0.00) -62(AGGGCGGGGC,-,0.00) -59(GCGGGGCCGGGC,+,0.00),-35(GCCTGGCCCAGC,-,0.00) -136(GGGTCCTGGCCG,+,0.00) 561_WT_peak_2494 chr15 56538277 56538503 + 77 NA Intergenic Intergenic -2907 NM_022841 64864 Hs.745089 NM_022841 HPRD:07807 RFX7 RFXDC2 regulatory factor X, 7 protein-coding 0.044248 0.559471 -59(AGCCACTA,-,0.00) -32(GCCGCGGG,+,0.00) -16(TAGCGGCG,-,0.00) 43(GGGAGTTGAAGG,+,0.00) 561_WT_peak_5151 chr3 71136723 71136986 + 77 NA intron (NM_001244810, intron 7 of 20) intron (NM_001244810, intron 7 of 20) -22780 NM_001244813 27086 Hs.59368 NM_032682 HPRD:18518 FOXP1 12CC4|QRF1|hFKH1B forkhead box P1 protein-coding 0.000000 0.333333 48(AGGTGTCT,+,0.00) 4(GGTCTGAGAAGG,-,0.00) -132(CAAAACAG,+,0.00) 561_WT_peak_2703 chr16 14723863 14724136 + 77 NA 5' UTR (NM_002582, exon 1 of 24) 5' UTR (NM_002582, exon 1 of 24) 129 NM_002582 5073 Hs.253197 NM_002582 HPRD:07250 PARN DAN poly(A)-specific ribonuclease protein-coding 0.113553 0.708029 -163(CAGCCCCAGGCC,+,0.00) 74(CCGCGACTTCCG,-,0.00) -77(CGGCGGAC,+,0.00) -159(CCCAGGCCCAGC,-,0.00),28(GCGGCGACTGCG,+,0.00) -139(CCGGCCATGGTC,+,0.00) 561_WT_peak_4614 chr20 34252477 34252825 + 77 NA intron (NM_001198838, intron 1 of 2) CpG 208 NR_037188 8904 Hs.246413 NM_003915 HPRD:05014 CPNE1 COPN1|CPN1 copine I protein-coding 0.086207 0.690544 -125(AGAGGCCT,-,0.00),128(AACGGCTT,-,0.00) 115(CAGCCCCAGCCC,+,0.00) -59(GCCGCGGG,+,0.00),104(CCCGCGGC,-,0.00) 55(CGGCACCA,-,0.00) 0(CCCGCACAGCCC,+,0.00) 41(CGGGGAAA,+,0.00) 51(TGCGCGGC,-,0.00) -39(CGAAGGCCCCGC,-,0.00) 49(GCTGCGCGGC,+,0.00),102(GCCCCGCGGC,-,0.00),162(CCTTCGCCGC,-,0.00) 561_WT_peak_4675 chr20 48429425 48429785 + 77 NA intron (NR_048538, intron 1 of 13) CpG 355 NM_001260491 23315 Hs.444202 NM_015266 HPRD:18062 SLC9A8 NHE-8|NHE8 solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 protein-coding 0.075000 0.653740 37(CGAGGAGGGCGG,-,0.00) -22(GGCCCCGGAAGG,+,0.00),129(AGGCCCGGAGAG,+,0.00) -84(GGCGGCGGAG,+,0.00) -31(CCGCCCTCCGGC,+,0.00),-19(CCCGGAAGGCGG,-,0.00) -92(TTTTCCCG,-,0.00) -26(CTCCGGCCCCGG,-,0.00) -139(GCTCCGCAGG,-,0.00),-74(GCGGCGGGGC,+,0.00) -74(GCGGCGGGGCTG,+,0.00) 561_WT_peak_7301 chr9 75058247 75058489 + 77 NA Intergenic AluSz|SINE|Alu -78205 NM_006007 7763 Hs.406096 NM_006007 HPRD:05302 ZFAND5 ZA20D2|ZFAND5A|ZNF216 zinc finger, AN1-type domain 5 protein-coding 0.008264 0.465021 -111(GGCCTCGA,-,0.00) -13(CAAACAGGAAGT,+,0.00) 561_WT_peak_7461 chr9 132890610 132890813 + 77 NA intron (NM_020960, intron 16 of 17) intron (NM_020960, intron 16 of 17) -44146 NM_014286 23413 Hs.642946 NM_014286 HPRD:04500 NCS1 FLUP|FREQ neuronal calcium sensor 1 protein-coding 0.014778 0.519608 561_WT_peak_364 chr1 110344600 110344802 + 77 NA Intergenic Intergenic -38057 NM_024526 79574 Hs.485352 NM_024526 HPRD:13277 EPS8L3 EPS8R3 EPS8-like 3 protein-coding 0.014851 0.581281 561_WT_peak_3610 chr19 8942834 8943196 + 77 NA Intergenic CpG -9450 NM_144693 148156 Hs.659797 NM_144693 HPRD:15841 ZNF558 - zinc finger protein 558 protein-coding 0.132597 0.746556 -4(GCTTCCGGTCTG,-,0.00),30(CCTTCCGGCTCG,-,0.00) 113(GGCGGCCGCG,+,0.00) -131(CCCCCGCC,-,0.00) -89(CAAAAGCG,+,0.00) 95(GGCGCGGC,-,0.00) -74(GCGGGGACGGAG,+,0.00),96(GCGCGGCGGGCG,+,0.00) -111(AGCCCGGCCC,-,0.00) -81(CCGACTCG,-,0.00) 561_WT_peak_3934 chr19 58873618 58874050 + 77 NA intron (NM_198458, intron 1 of 2) CpG 380 NM_001207009 162968 Hs.447840 NM_198458 HPRD:15806 ZNF497 - zinc finger protein 497 protein-coding 0.092593 0.653580 104(ACTTCCGGGCCG,-,0.00) 210(GCCGGAGGGCGG,-,0.00) 243(TCCGTCGG,-,0.00) 242(GTCCGTCG,-,0.00) 206(TGGAGCCGGAGG,+,0.00) -51(GGCGCGGC,-,0.00) 110(GGGCCGCTCT,+,0.00),216(GGGCGGATCT,+,0.00) -139(GCTGGGAGGC,+,0.00) 561_WT_peak_4920 chr22 39795674 39795964 + 77 NA promoter-TSS (NM_006116) promoter-TSS (NM_006116) 60 NM_006116 10454 Hs.507681 NM_006116 HPRD:04012 TAB1 3'-Tab1|MAP3K7IP1 TGF-beta activated kinase 1/MAP3K7 binding protein 1 protein-coding 0.082759 0.707904 -127(CCGGCAGCGCGG,-,0.00),-67(GCGGGGAGGCGG,-,0.00) -151(GGGGTGGCGCTG,-,0.00),-61(AGGCGGGCGCTC,-,0.00) 46(GGCGGGGG,+,0.00) -100(TCGGGCCG,+,0.00) -76(CGCTGCTCTGCG,-,0.00) -98(GGGCCGCTCT,+,0.00) 561_WT_peak_3897 chr19 55770529 55770809 + 77 NA promoter-TSS (NM_014931) promoter-TSS (NM_014931) -631 NM_014931 22870 Hs.515610 NM_014931 HPRD:17207 PPP6R1 KIAA1115|PP6R1|SAP190|SAPS1 protein phosphatase 6, regulatory subunit 1 protein-coding 0.092857 0.608541 -128(TGCCCCGGAATA,+,0.00) 93(TCGTTCCG,+,0.00) -91(GCTGCGCA,+,0.00) 561_WT_peak_1998 chr13 39612167 39612412 + 77 NA promoter-TSS (NM_025138) promoter-TSS (NM_025138) -76 NM_025138 80209 Hs.318526 NM_025138 HPRD:12616 PROSER1 C13orf23 proline and serine rich 1 protein-coding 0.036735 0.504065 561_WT_peak_1604 chr12 12594984 12595154 + 77 NA intron (NM_001300742, intron 3 of 3) intron (NM_001300742, intron 3 of 3) 85056 NM_058169 118426 Hs.720779 NM_058169 HPRD:17439 LOH12CR1 LOH1CR12 loss of heterozygosity, 12, chromosomal region 1 protein-coding 0.011765 0.555556 561_WT_peak_5856 chr5 95873244 95873491 + 77 NA Intergenic Intergenic -104382 NM_000439 5122 Hs.78977 NM_000439 HPRD:01201 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding 0.008097 0.415323 561_WT_peak_3128 chr17 33814585 33814932 + 77 NA promoter-TSS (NM_001195790) promoter-TSS (NM_001195790) 0 NM_001195790 100506736 Hs.447559 NM_001145027 ENSG00000205045 SLFN12L - schlafen family member 12-like protein-coding 0.074928 0.531609 118(TCGACTCC,+,0.00) 68(CGCGTCCG,+,0.00),142(CGCACGCG,-,0.00) -152(GCTGTGCCAGCG,+,0.00) 561_WT_peak_4481 chr2 223725774 223725997 + 77 NA 5' UTR (NM_203372, exon 1 of 16) 5' UTR (NM_203372, exon 1 of 16) 153 NM_203372 2181 Hs.655772 NM_004457 ACSL3 ACS3|FACL3|PRO2194 acyl-CoA synthetase long-chain family member 3 protein-coding 0.152466 0.750000 -101(CGCATACG,+,0.00) -132(GGGGCCGGGA,-,0.00) -127(CGGGACGA,-,0.00) -114(CGTTGGAC,+,0.00) 52(CGGTTGTG,-,0.00) -4(TGCGCGGG,-,0.00) -142(CTACGCGG,+,0.00) -46(GCGGCGGCGC,+,0.00) -14(CAGCCAGGCCTG,-,0.00) 561_WT_peak_3540 chr18 77794534 77794794 + 77 NA intron (NM_001171967, intron 1 of 5) CpG 318 NM_024805 79863 Hs.728931 NM_024805 RBFA C18orf22|HsT169 ribosome binding factor A (putative) protein-coding 0.084615 0.643678 -162(GTCTCCGGGCCC,-,0.00) -37(GGCGGGGG,+,0.00) -18(GGCGCGGT,-,0.00) 51(GCGGCCTAGCTC,+,0.00) 561_WT_peak_5344 chr3 184080719 184080916 + 77 NA promoter-TSS (NM_001278715) intron (NM_001278700, intron 1 of 4) 46 NM_001278699 5437 Hs.432574 NM_006232 HPRD:09082 POLR2H RPABC3|RPB17|RPB8 polymerase (RNA) II (DNA directed) polypeptide H protein-coding 0.091371 0.757576 -26(GGGCCCGGCTTC,+,0.00) -56(GCGGGCACGCGG,-,0.00) -151(GGCCGGCCCCGG,-,0.00) -49(CGCGGACCGGCG,+,0.00) -102(GGGCGGGGTT,+,0.00) 561_WT_peak_3863 chr19 50380099 50380296 + 77 NA promoter-TSS (NM_001168222) promoter-TSS (NM_001168222) 447 NM_001098632 84335 Hs.515542 NM_032375 HPRD:12441 AKT1S1 Lobe|PRAS40 AKT1 substrate 1 (proline-rich) protein-coding 0.045685 0.500000 -112(AGCGACCT,-,0.00) 561_WT_peak_3866 chr19 50432828 50433174 + 77 NA promoter-TSS (NM_153718) promoter-TSS (NM_153718) -13 NM_016553 23636 Hs.574492 NM_012346 HPRD:05782 NUP62 IBSN|SNDI|p62 nucleoporin 62kDa protein-coding 0.080925 0.628242 168(CCCTCCCTGCCC,+,0.00) -41(TGCGCAGT,-,0.00) 99(CGCAGAGCCGCG,+,0.00) -6(GCTGCGGACC,+,0.00) 561_WT_peak_3547 chr19 510727 511030 + 77 NA intron (NM_033513, intron 1 of 1) MER20|DNA|hAT-Charlie 3381 NM_033513 91978 Hs.369613 NM_033513 HPRD:12701 TPGS1 C19orf20|GTRGEO22|PGs1 tubulin polyglutamylase complex subunit 1 protein-coding 0.042904 0.644737 -2(TCCCTGGCCT,+,0.00) 66(CGCCCGGC,-,0.00) -53(CCGACTCG,-,0.00),33(CCGAGTCG,-,0.00) 561_WT_peak_5565 chr4 103266283 103266608 + 77 NA promoter-TSS (NM_001135147) promoter-TSS (NM_001135147) -35 NM_001135147 64116 Hs.288034 NM_022154 HPRD:12286 SLC39A8 BIGM103|LZT-Hs6|ZIP8 solute carrier family 39 (zinc transporter), member 8 protein-coding 0.043077 0.527607 -7(CCCTCTCCCCGG,+,0.00) 561_WT_peak_3659 chr19 14682748 14683049 + 77 NA promoter-TSS (NM_004146) promoter-TSS (NM_004146) -9 NM_004146 4713 Hs.532853 NM_004146 HPRD:11957 NDUFB7 B18|CI-B18 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa protein-coding 0.066445 0.649007 73(GGCGGAGGCGGG,-,0.00) -51(CTACCCGGAACC,+,0.00),-17(GCTTCCGGGTCA,-,0.00) -125(TAGCGCCG,-,0.00) -122(CGCCGGAC,+,0.00) -107(GCCCCCATGGCT,+,0.00),-105(CCCCATGGCTGC,-,0.00) 3(GCTGCGGAGA,+,0.00) 561_WT_peak_4636 chr20 40246929 40247183 + 77 NA promoter-TSS (NM_032221) promoter-TSS (NM_032221) 77 NM_032221 84181 Hs.740645 NM_032221 HPRD:13049 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding 0.047244 0.541176 -18(CCGCCTTCCCTG,+,0.00) 43(CGGCTGCCGCTC,-,0.00) -154(AGGCCAGGGA,-,0.00) -162(GTCCGCCG,-,0.00) 6(GCTTCGCCGG,-,0.00) 561_WT_peak_6390 chr6 89789401 89789803 + 77 NA promoter-TSS (NM_006813) promoter-TSS (NM_006813) -827 NM_006813 10957 Hs.75969 NM_006813 HPRD:08412 PNRC1 B4-2|PNAS-145|PROL2|PRR2 proline-rich nuclear receptor coactivator 1 protein-coding 0.029851 0.409429 17(TTTACGCG,-,0.00) 561_WT_peak_2332 chr14 91696097 91696751 + 77 NA Intergenic Intergenic 14428 NM_001177676 8111 Hs.8882 NM_003485 HPRD:03241 GPR68 GPR12A|OGR1 G protein-coupled receptor 68 protein-coding 0.010703 0.511450 5(AACCACTT,-,0.00),37(ATGTGGCT,+,0.00) -99(GACCACCAGCCC,+,0.00) -26(CTGCACGA,-,0.00) 286(GGGAGGCCAAGG,+,0.00) 561_WT_peak_231 chr1 51435424 51435534 + 77 NA promoter-TSS (NM_078626) promoter-TSS (NM_078626) -163 NM_078626 1031 Hs.525324 NM_001262 HPRD:04534 CDKN2C INK4C|p18|p18-INK4C cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) protein-coding 0.081818 0.675676 561_WT_peak_5966 chr5 141348527 141349012 + 77 NA promoter-TSS (NM_183401) promoter-TSS (NM_183401) 57 NM_183401 9604 Hs.483616 NM_004290 HPRD:05745 RNF14 ARA54|HFB30|TRIAD2 ring finger protein 14 protein-coding 0.107216 0.724280 62(GGCGGAGGGCGG,-,0.00),246(GGAGGAAGGGGA,-,0.00) -120(GGCGCCCGAG,+,0.00) 94(CCGGGCGGCCGG,-,0.00) 93(GCCGGGCG,+,0.00) -153(TCGCGCCG,+,0.00) -16(CGGAAGAGGCGG,+,0.00) 14(CGTCTCTA,+,0.00) 188(CAAATCCG,+,0.00) -90(GCTGCGCA,+,0.00) -140(GCCGCCTTGGGC,+,0.00),-100(GACCACGGCGGC,-,0.00) 561_WT_peak_1938 chr13 20356525 20357130 + 77 NA non-coding (NR_044998, exon 1 of 8) non-coding (NR_044998, exon 1 of 8) 332 NR_003272 55269 Hs.213198 NM_001042414 PSPC1 PSP1 paraspeckle component 1 protein-coding 0.092562 0.589109 107(CGCGGCCGCC,-,0.00) -162(AAGCGGAT,+,0.00) 73(CCGGCTCCCCGG,+,0.00),147(GCGCGAAGGCGG,-,0.00) -28(CGTGTACG,+,0.00) -66(TCGGTGGG,-,0.00) -14(CGCCCGGC,-,0.00) 82(CGGCAAGA,-,0.00) 279(CGTCTCTA,+,0.00) 222(CCTCGGAC,+,0.00) 184(GCTTCAGGTTTC,-,0.00) -119(CGCTGGGCTCGC,-,0.00) -61(GGGCAGATTT,+,0.00),157(GGGCCGGGTT,+,0.00) 337(CGAGTCGG,+,0.00) 93(AGCGCCATGGCT,+,0.00),95(CGCCATGGCTGC,-,0.00) 561_WT_peak_4240 chr2 102844197 102844490 + 77 NA intron (NM_003854, intron 9 of 11) intron (NM_003854, intron 9 of 11) 40910 NM_003854 8808 Hs.659863 NM_003854 HPRD:05150 IL1RL2 IL-1Rrp2|IL-36R|IL1R-rp2|IL1RRP2 interleukin 1 receptor-like 2 protein-coding 0.023891 0.534014 107(GCCCCGCCCT,+,0.00) 106(AGCCCCGCCC,-,0.00) 561_WT_peak_2679 chr16 4233448 4233785 + 77 NA Intergenic CpG 58465 NM_001098814 6345 Hs.10041 NM_001098814 ENSG00000185739 SRL - sarcalumenin protein-coding 0.100890 0.707101 0(CTCGGCCTCC,-,0.00) 146(GGGCCGGCGCTG,-,0.00) -107(CCGATCGA,+,0.00),-48(CGGACCGA,+,0.00) 15(CCCTCCCAGCCA,+,0.00) 143(GCAGGGCCGGCG,+,0.00) -53(CGAGGCGG,+,0.00) -18(GCGCATGGCAGC,-,0.00),151(GGCGCTGGCGGC,-,0.00) 561_WT_peak_2740 chr16 23652687 23653086 + 77 NA promoter-TSS (NM_024675) promoter-TSS (NM_024675) 199 NM_032486 84516 Hs.435941 NM_032486 DCTN5 - dynactin 5 (p25) protein-coding 0.075188 0.617500 -60(GTAGCCGGAATC,+,0.00) -157(GACGGCCGAG,+,0.00) -39(CTGACCGA,+,0.00),-35(CCGACTGA,+,0.00) -65(CGGAAGTAGCCG,+,0.00) 186(TAGCGATG,-,0.00) 62(TGCGCGGG,-,0.00) 7(GCGGCCATGGAG,+,0.00) -142(GAGCGAGGCCGC,-,0.00) 561_WT_peak_6809 chr7 105987022 105987338 + 77 NA Intergenic Charlie6|DNA|hAT-Charlie -61542 NM_005746 10135 Hs.489615 NM_005746 HPRD:09938 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding 0.006329 0.384858 46(AGGTTTTG,-,0.00),66(AAAAACCG,+,0.00) 561_WT_peak_2752 chr16 28152272 28152620 + 77 NA intron (NM_001270940, intron 10 of 24) intron (NM_001270940, intron 10 of 24) 70793 NM_001270940 23214 Hs.460468 NM_015171 HPRD:10525 XPO6 EXP6|RANBP20 exportin 6 protein-coding 0.002874 0.432665 561_WT_peak_4666 chr20 47804808 47805177 + 77 NA promoter-TSS (NM_004602) promoter-TSS (NM_004602) -88 NM_017452 6780 Hs.596704 NM_004602 HPRD:03422 STAU1 PPP1R150|STAU staufen double-stranded RNA binding protein 1 protein-coding 0.113821 0.754054 -34(CCGCCCGCCTCC,+,0.00) -57(GGGCAGGCGCCC,-,0.00),26(CGGCTGGCACTG,-,0.00) -44(CCCCCGGC,-,0.00),-37(CCCCCGCC,-,0.00),64(GCCGGGGG,+,0.00) -78(CGGCAGGA,-,0.00) -144(GGGAGCCGAGAG,+,0.00) -14(CCCCGGCCCCAC,-,0.00),40(GCGGAGCCTGCG,+,0.00),67(GGGGGCCCAGCG,+,0.00),126(CCGGGGCCTGCC,+,0.00) 37(GCGGCGGAGC,+,0.00) 128(GGGGCCTGCCGG,+,0.00) 561_WT_peak_6256 chr6 30028745 30029154 + 77 NA promoter-TSS (NM_014596) promoter-TSS (NM_014596) 12 NR_026751 80862 Hs.653168 NR_026751 ENSG00000204623 ZNRD1-AS1 C6orf12|HTEX4|NCRNA00171|TCTEX4|ZNRD1-AS|ZNRD1AS ZNRD1 antisense RNA 1 ncRNA 0.070905 0.553659 134(GAGCTGGCGCTC,-,0.00) 122(GCCGCGGG,+,0.00) 117(GCCCCGCCGC,-,0.00) 561_WT_peak_1805 chr12 94656548 94656813 + 77 NA intron (NR_037687, intron 1 of 11) MIRb|SINE|MIR 383 NR_037687 10154 Hs.584845 NM_005761 HPRD:05036 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding 0.007547 0.469925 -41(AAGTGTCT,+,0.00) -140(TGGGTAAA,+,0.00) 561_WT_peak_3031 chr17 8028885 8029221 + 77 NA Intergenic Intergenic -1643 NM_001165967 84667 Hs.434828 NM_032580 HPRD:09729 HES7 SCDO4|bHLHb37 hes family bHLH transcription factor 7 protein-coding 0.062500 0.531157 -143(TGGCCCGGTGGC,+,0.00),57(AGGCCCGGGTTC,+,0.00) -69(TCCCTGGCCT,+,0.00) 10(GCCGCGCA,+,0.00) -154(GGGCGGCTTT,+,0.00) 561_WT_peak_2900 chr16 71928952 71929852 + 77 NA promoter-TSS (NM_014761) promoter-TSS (NM_014761) 6 NM_001270978 9798 Hs.232194 NM_014761 IST1 OLC1 increased sodium tolerance 1 homolog (yeast) protein-coding 0.088889 0.659267 -129(CTCGGCCGCT,-,0.00) -40(AGCCGGTT,-,0.00),619(AGGCCTCT,+,0.00) -143(GGCTTCGA,-,0.00),639(TCGAAGCC,+,0.00) 94(TCAGTCGG,-,0.00) 130(CCCCCGCC,-,0.00),135(GCCGCGGG,+,0.00),556(CCCGCGGC,-,0.00) 360(CGGCAGGA,-,0.00) 252(CGTGGCTA,+,0.00) -37(CGGTTATG,-,0.00) -5(GGCGCGGT,-,0.00),155(GCCGCGCC,+,0.00) 150(CCCCGGCCGCGC,-,0.00) 259(ATATCGGCCC,-,0.00) 561_WT_peak_5766 chr5 61580778 61581004 + 77 NA Intergenic MLT1K|LTR|ERVL-MaLR -21098 NM_001243953 3796 Hs.558351 NM_004520 KIF2A CDCBM3|HK2|KIF2 kinesin heavy chain member 2A protein-coding 0.004425 0.405286 -51(GCTTCCTGTGAC,-,0.00) 561_WT_peak_3275 chr17 57696561 57696961 + 77 NA promoter-TSS (NM_001288653) promoter-TSS (NM_001288653) -289 NM_004859 1213 Hs.491351 NM_004859 HPRD:00350 CLTC CHC|CHC17|CLH-17|CLTCL2|Hc clathrin, heavy chain (Hc) protein-coding 0.065000 0.625935 121(AAGCCTCT,+,0.00) -142(AGGGCAGGGA,-,0.00) -69(GGCGGGGG,+,0.00),28(CCCCCGCC,-,0.00) 61(GAAACAGGCAGC,+,0.00) 31(CCGCCACG,-,0.00) -26(GCGGCGAGGC,+,0.00) 561_WT_peak_1759 chr12 69201982 69202184 + 77 NA promoter-TSS (NM_001145337) promoter-TSS (NM_001145337) 131 NM_002392 4193 Hs.484551 NM_002392 HPRD:01272 MDM2 ACTFS|HDMX|hdm2 MDM2 proto-oncogene, E3 ubiquitin protein ligase protein-coding 0.079208 0.674877 -1(TGGCCCGGAGAG,+,0.00) -94(GGCGGCCGCG,+,0.00) -23(TGCGTACG,+,0.00),-21(CGTACGAG,-,0.00) -78(CTGACCGA,+,0.00) 27(GCCCAGGGCGTC,-,0.00) 561_WT_peak_7392 chr9 114393475 114393665 + 77 NA promoter-TSS (NM_004125) promoter-TSS (NM_004125) -62 NR_037148 548645 Hs.534196 NM_001015882 HPRD:18685 DNAJC25 bA16L21.2.1 DnaJ (Hsp40) homolog, subfamily C , member 25 protein-coding 0.094737 0.664921 -137(TAGTGGCT,+,0.00) -13(CCGGGCGCGCGG,-,0.00) -55(GGCGTCGG,-,0.00) -14(GCCGGGCG,+,0.00) -80(GCCGCGCC,+,0.00),-63(TGCGCGGA,-,0.00) 561_WT_peak_457 chr1 147016894 147017072 + 77 NA intron (NM_004326, intron 1 of 9) intron (NM_004326, intron 1 of 9) 3712 NM_004326 607 Hs.415209 NM_004326 HPRD:04000 BCL9 LGS B-cell CLL/lymphoma 9 protein-coding 0.022472 0.497207 -73(CTAAACCG,+,0.00) 561_WT_peak_4370 chr2 174829649 174830016 + 77 NA promoter-TSS (NM_001017371) promoter-TSS (NM_001017371) 598 NM_001172712 6670 Hs.531587 NM_003111 HPRD:03483 SP3 SPR2 Sp3 transcription factor protein-coding 0.122616 0.744565 -148(CCGCCCGCCCCG,+,0.00),-129(GCGGGGAGACGG,-,0.00) -30(TCGGTCGC,-,0.00) -78(AGGGGAGGGA,-,0.00) -160(CGGCGGAC,+,0.00),180(CGGCGGAC,+,0.00) -72(GGGAGGCGCAGG,+,0.00) -147(CGCCCGCCCCGG,-,0.00),33(GCGGCGGCGGCG,+,0.00),148(GCGGCGGCGGCG,+,0.00) 109(CGGGGCTCCCCG,-,0.00) -136(GGGCCTGGCGGG,-,0.00) -137(GGGGCCTGGCGG,+,0.00),9(CCGGGCTGGCTG,+,0.00) 561_WT_peak_1966 chr13 26796156 26796719 + 77 NA promoter-TSS (NM_005977) promoter-TSS (NM_005977) 71 NM_005977 6049 Hs.136885 NM_005977 HPRD:05027 RNF6 - ring finger protein (C3H2C3 type) 6 protein-coding 0.099467 0.661348 365(ATGCGTCT,+,0.00) 212(TCGAGGCC,+,0.00) 42(AGGCCCCAGCCC,+,0.00) 142(TCCGTCGG,-,0.00) 141(GTCCGTCG,-,0.00) -26(GAAGCCGGAAGC,+,0.00) -132(TGGGCGGC,-,0.00),-74(GCCGCGCC,+,0.00),72(GCCGCCCA,+,0.00) 80(CTTGGCGG,+,0.00),250(CCGCGTAG,-,0.00) 97(GCTCCGCAGC,-,0.00) 65(CAGCCACGCCGC,-,0.00),103(CAGCCGGCCCGG,-,0.00) 561_WT_peak_288 chr1 71546448 71546767 + 77 NA promoter-TSS (NR_046217) promoter-TSS (NR_046217) 365 NM_203350 9406 Hs.194718 NM_005455 HPRD:09185 ZRANB2 ZIS|ZIS1|ZIS2|ZNF265 zinc finger, RAN-binding domain containing 2 protein-coding 0.059561 0.546875 -134(CCTTCTTCCCGC,+,0.00) -107(TCGCCGCC,+,0.00) 561_WT_peak_376 chr1 111505857 111506441 + 77 NA intron (NM_018372, intron 1 of 3) CpG 417 NM_018372 55791 Hs.25245 NM_018372 HPRD:17975 LRIF1 C1orf103|RIF1 ligand dependent nuclear receptor interacting factor 1 protein-coding 0.068493 0.570940 -35(TCGGTCCG,-,0.00) -74(CGTCGGCC,+,0.00) 206(CGAAACCG,+,0.00) 0(CGCGGAGCCGCT,+,0.00) 338(GGGCCGAGTT,+,0.00) -39(CTACTCGG,+,0.00) 561_WT_peak_4647 chr20 44486335 44486512 + 77 NA promoter-TSS (NM_005469) promoter-TSS (NM_005469) 203 NM_080752 140831 Hs.292135 NM_080752 HPRD:15903 ZSWIM3 C20orf164|PPP1R174 zinc finger, SWIM-type containing 3 protein-coding 0.022599 0.612360 -40(GCGGCCATGGAG,+,0.00) 561_WT_peak_5917 chr5 133512432 133512770 + 77 NA 5' UTR (NM_170679, exon 1 of 6) 5' UTR (NM_170679, exon 1 of 6) 123 NM_170679 6500 Hs.171626 NM_006930 SKP1 EMC19|OCP-II|OCP2|SKP1A|TCEB1L|p19A S-phase kinase-associated protein 1 protein-coding 0.133136 0.696165 134(GGCCGCCGAG,+,0.00) 34(AGCCACTA,-,0.00) 88(GGCGCCGA,-,0.00) -10(AGAGCCGGGA,-,0.00) -141(GCCGCGGG,+,0.00) -104(CGGCACGC,-,0.00) -89(TAGCCACG,-,0.00),5(TAGCGAAG,-,0.00) -128(CCAAACCG,+,0.00),19(AAAAACCG,+,0.00) -65(TGGGCGGC,-,0.00),56(GGCGCGGC,-,0.00) 101(CCGGGGCGCGCG,+,0.00) 53(CGCGGCGCGGCG,+,0.00),53(CGCGGCGCGGCG,-,0.00) 44(GCGTCGCAGC,-,0.00) 123(GCGGCTGGGCTG,+,0.00) 561_WT_peak_371 chr1 111190122 111190406 + 76 NA Intergenic MER121|DNA|TcMar? -16168 NM_001204269 3737 Hs.248139 NM_004974 HPRD:01443 KCNA2 HBK5|HK4|HUKIV|KV1.2|MK2|NGK1|RBK2 potassium voltage-gated channel, shaker-related subfamily, member 2 protein-coding 0.003521 0.357895 561_WT_peak_626 chr1 173793375 173793677 + 76 NA promoter-TSS (NM_018122) promoter-TSS (NM_018122) 251 NM_001127181 91687 Hs.531856 NM_033319 HPRD:15909 CENPL C1orf155|CENP-L|dJ383J4.3 centromere protein L protein-coding 0.066225 0.567657 -148(CGCGGAGGGGGA,-,0.00) -44(GAATTCGGCCCT,-,0.00) -34(CTCCGCCGCC,-,0.00) -61(AAGCCGTT,+,0.00),99(AGCCACTT,-,0.00) -43(AATTCGGCCC,-,0.00) -3(CCGACTCG,-,0.00) 561_WT_peak_3581 chr19 3721487 3721672 + 76 NA promoter-TSS (NM_001267561) promoter-TSS (NM_001267561) -118 NM_001267561 27134 Hs.25527 NM_014428 HPRD:18194 TJP3 ZO-3|ZO3 tight junction protein 3 protein-coding 0.091892 0.688172 -88(CGCGGCCGCC,-,0.00) -104(CGGGCCGGGC,-,0.00) -132(TCCTGCCG,+,0.00),-105(TCGGGCCG,+,0.00) -103(GGGCCGGGCT,+,0.00) -109(CTTGTCGG,+,0.00) 561_WT_peak_2581 chr15 83679808 83680024 + 76 NA intron (NM_001160116, intron 1 of 3) L2c|LINE|L2 477 NM_001160116 123207 Hs.352541 NM_144597 HPRD:14538 C15orf40 - chromosome 15 open reading frame 40 protein-coding 0.041667 0.594470 41(GCCGCCGGGCCC,-,0.00) 34(CTCGGCTGCC,-,0.00) -46(ATGCCGCT,+,0.00) -48(TCATGCCG,+,0.00) 561_WT_peak_4409 chr2 192543028 192543192 + 76 NA non-coding (NR_045623, exon 1 of 7) non-coding (NR_045623, exon 1 of 7) 248 NR_045623 64859 Hs.591610 NM_022837 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding 0.054878 0.478788 -7(TTTGCCCG,-,0.00) 561_WT_peak_4466 chr2 216176852 216177149 + 76 NA intron (NM_004044, intron 1 of 15) CpG 321 NM_004044 471 Hs.90280 NM_004044 HPRD:03434 ATIC AICAR|AICARFT|HEL-S-70p|IMPCHASE|PURH 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase protein-coding 0.111111 0.748322 -7(CCCGCTCCCCGG,+,0.00) -94(CCTGCGGCCCCC,-,0.00) -113(GGCGCGGT,-,0.00) -121(AGCGGAGCGGCG,+,0.00) -38(GGGCGGCGCT,+,0.00) -71(CTTGGCGG,+,0.00) -156(GCAGCCATGGCT,+,0.00),-154(AGCCATGGCTCC,-,0.00),-76(CCCGCCTTGGCG,+,0.00),-74(CGCCTTGGCGGC,-,0.00) 2(CGGCCGGGCCGC,-,0.00) 561_WT_peak_6084 chr6 3849508 3849763 + 76 NA promoter-TSS (NM_012135) promoter-TSS (NM_012135) 3 NM_012135 26240 Hs.140944 NM_012135 HPRD:16883 FAM50B D6S2654E|X5L family with sequence similarity 50, member B protein-coding 0.074510 0.687500 -96(CCGCCTCCCCGC,+,0.00) -148(ACTTCCTGTTTC,-,0.00),-65(ACTTCCTGTGTC,-,0.00) -89(CCCGCCAGGGGG,+,0.00) 561_WT_peak_595 chr1 161719536 161719783 + 76 NA promoter-TSS (NM_007240) promoter-TSS (NM_007240) 78 NM_007240 11266 Hs.416216 NM_007240 HPRD:05323 DUSP12 DUSP1|YVH1 dual specificity phosphatase 12 protein-coding 0.080972 0.661290 -100(GGCTCCGGGCCC,-,0.00) -133(AGCCGCCT,-,0.00) -61(CAGCGCCAGCAG,+,0.00) -2(TCGGTGGG,-,0.00) -142(AGGGCAGGAA,-,0.00) -117(GGCGCGGC,-,0.00) 14(CGTCGCGG,+,0.00) 561_WT_peak_6417 chr6 106565486 106565767 + 76 NA Intergenic Intergenic 18889 NM_182907 639 Hs.436023 NM_001198 HPRD:04572 PRDM1 BLIMP1|PRDI-BF1 PR domain containing 1, with ZNF domain protein-coding 0.017794 0.471631 -75(AGGGTAAA,+,0.00) -136(CGTGGCGG,+,0.00) 561_WT_peak_4226 chr2 98262532 98262725 + 76 NA exon (NM_001862, exon 1 of 4) exon (NM_001862, exon 1 of 4) 107 NM_001862 1329 Hs.1342 NM_001862 COX5B COXVB cytochrome c oxidase subunit Vb protein-coding 0.103627 0.701031 -156(CGCGGACG,+,0.00) -110(GCCGCGCA,+,0.00),-77(GGCGCGGC,-,0.00) -115(CGCTGGCCGCGC,-,0.00) -131(CTTCGCGG,+,0.00) 10(TCCCAGGGCGGC,-,0.00) 17(GCGGCAAAGC,+,0.00) 561_WT_peak_6275 chr6 31515352 31515555 + 76 NA promoter-TSS (NM_138282).2 promoter-TSS (NM_138282).2 100 NM_001144961 4795 Hs.2764 NM_005007 HPRD:07043 NFKBIL1 IKBL|LST1|NFKBIL nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 protein-coding 0.039409 0.593137 -60(GGCGGGGG,+,0.00) 10(CGGGTACA,+,0.00) 561_WT_peak_3693 chr19 19774120 19774337 + 76 NA exon (NM_020410, exon 1 of 26) exon (NM_020410, exon 1 of 26) 275 NM_020410 57130 Hs.501794 NM_020410 HPRD:12501 ATP13A1 ATP13A ATPase type 13A1 protein-coding 0.101382 0.706422 -80(CTGCCCCAGCCC,+,0.00),9(CAGCGCCAACCG,+,0.00) -144(CGCGTGCG,+,0.00),-142(CGTGCGCG,-,0.00) -36(CGGGTAAA,+,0.00) -31(AAAGCAGCCC,-,0.00) -45(CAACCAGGCCGG,-,0.00) 561_WT_peak_5198 chr3 108557375 108557612 + 76 NA intron (NM_016388, intron 2 of 5) intron (NM_016388, intron 2 of 5) 15862 NM_016388 50852 Hs.138701 NM_016388 HPRD:05392 TRAT1 TCRIM|TRIM T cell receptor associated transmembrane adaptor 1 protein-coding 0.008439 0.449580 -68(TAAAACCG,+,0.00) -86(GCTTAGTGTTTC,-,0.00) 561_WT_peak_474 chr1 148598213 148598493 + 76 NA intron (NR_104217, intron 2 of 17) tRNA-Asn-AAC|tRNA|tRNA 37506 NM_173638 284565 Hs.523572 NM_173638 HPRD:14710 NBPF15 AB14|AG3|NBPF16 neuroblastoma breakpoint family, member 15 protein-coding 0.053571 0.519573 -149(TAGTGGCT,+,0.00) 89(CGCCCGGC,-,0.00) 93(CGGCAGGA,-,0.00) 561_WT_peak_5710 chr5 40835060 40835685 + 76 NA promoter-TSS (NM_000997) promoter-TSS (NM_000997) 15 NM_000997 6167 Hs.447582 NM_000997 RPL37 L37 ribosomal protein L37 protein-coding 0.068800 0.571885 72(TGCGGCCGAG,+,0.00) -150(ATGCGGCT,+,0.00) 253(CCGGAAAGGCGG,-,0.00) 356(TCGTGCTG,+,0.00) 182(GTCCGTCG,-,0.00),306(CGTCGGGC,+,0.00) 344(CAGTTTTG,-,0.00),393(CGGTTTCG,-,0.00) 159(GGCGCGGT,-,0.00) 161(CGCGGTGCAGCG,+,0.00) 561_WT_peak_1554 chr12 4262623 4262935 + 76 NA Intergenic Intergenic -120123 NM_001759 894 Hs.376071 NM_001759 HPRD:00451 CCND2 KIAK0002 cyclin D2 protein-coding 0.006410 0.546326 -158(GGGGTGAGAGTG,-,0.00) 561_WT_peak_5493 chr4 57302413 57302660 + 76 NA promoter-TSS (NM_002703) promoter-TSS (NM_002703) 267 NM_001079524 10606 Hs.518774 NM_006452 HPRD:01401 PAICS ADE2|ADE2H1|AIRC|PAIS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase protein-coding 0.101215 0.685484 -71(GGATCCGGGCCC,-,0.00),62(GCTCCCGGGCCT,-,0.00) 64(TCCCGGGCCT,+,0.00) -131(GGCGCGGT,-,0.00) -138(GCTTCCCGGC,-,0.00) 561_WT_peak_4761 chr21 30445614 30445945 + 76 NA 5' UTR (NM_001282907, exon 1 of 16) 5' UTR (NM_001282907, exon 1 of 16) 339 NM_001282909 10694 Hs.125113 NM_006585 HPRD:10816 CCT8 C21orf112|Cctq|D21S246|PRED71 chaperonin containing TCP1, subunit 8 (theta) protein-coding 0.084592 0.635542 -138(TCGGCCTTCTCC,+,0.00) -92(GGTGGCCGAG,+,0.00),15(CGCGGCCGCC,-,0.00) -44(CCCCCGGC,-,0.00) -154(TCGTGCCG,+,0.00) -20(CACGCTCAGCCC,+,0.00) -102(CGCAGGCTCCGG,-,0.00),-35(GCTGAGCCAGGG,+,0.00) 126(AGCGCCATGGCC,+,0.00) 561_WT_peak_6628 chr7 26333660 26333930 + 76 NA intron (NM_001199835, intron 1 of 6) intron (NM_001199835, intron 1 of 6) 2280 NM_013322 29887 Hs.741316 NM_013322 HPRD:15409 SNX10 OPTB8 sorting nexin 10 protein-coding 0.003704 0.442804 -149(AACCACTT,-,0.00) 561_WT_peak_5403 chr4 6182639 6182878 + 76 NA intron (NM_001099433, intron 1 of 20) intron (NM_001099433, intron 1 of 20) 19560 NM_001099433 152789 Hs.479066 NM_144720 HPRD:11292 JAKMIP1 Gababrbp|JAMIP1|MARLIN1 janus kinase and microtubule interacting protein 1 protein-coding 0.012552 0.462500 561_WT_peak_5491 chr4 57253491 57253771 + 76 NA promoter-TSS (NM_001286669) promoter-TSS (NM_001286669) 43 NM_001286669 132949 Hs.104347 NM_181806 HPRD:12398 AASDH ACSF4|LYS2|NRPS1098|NRPS998 aminoadipate-semialdehyde dehydrogenase protein-coding 0.110714 0.615658 39(GACCCCGGGCCG,-,0.00) 59(GAGCTGGCGCTG,-,0.00) -161(CCCCCGCC,-,0.00) 13(CGTCGCTA,+,0.00) -157(CGCCGGAC,+,0.00) -149(ACCGCGCC,+,0.00) -73(CGTCGCGG,+,0.00),10(CCGCGTCG,-,0.00) 43(CCGGGCCGGCTG,+,0.00) 561_WT_peak_331 chr1 94883603 94883791 + 76 NA promoter-TSS (NM_002858) promoter-TSS (NM_002858) -236 NM_002858 5825 Hs.700576 NM_002858 HPRD:01368 ABCD3 ABC43|PMP70|PXMP1|ZWS2 ATP-binding cassette, sub-family D (ALD), member 3 protein-coding 0.090426 0.671958 -144(CGTCGCTG,+,0.00) -14(GCGCCGCGTT,+,0.00) -46(GCCTCGCAGG,-,0.00) 561_WT_peak_545 chr1 155164185 155164397 + 76 NA promoter-TSS (NR_030281) promoter-TSS (NR_030281) -677 NR_030281 693235 NR_030281 miRBase:MI0003560 MIR92B MIRN92B|hsa-mir-92b microRNA 92b ncRNA 0.080189 0.629108 -2(CCGACGGA,+,0.00) -4(GGCCGACG,-,0.00) 561_WT_peak_1690 chr12 49682228 49682423 + 76 NA Intergenic Intergenic -6584 NM_006262 5630 Hs.37044 NM_006262 PRPH NEF4|PRPH1 peripherin protein-coding 0.041026 0.474490 561_WT_peak_4117 chr2 68478276 68478429 + 76 NA intron (NM_000945, intron 1 of 5) intron (NM_000945, intron 1 of 5) 1299 NM_000945 5534 Hs.280604 NM_000945 HPRD:03195 PPP3R1 CALNB1|CNB|CNB1 protein phosphatase 3, regulatory subunit B, alpha protein-coding 0.071895 0.551948 -114(GGCGTCGT,-,0.00) -150(CCGAGCGA,+,0.00),-60(TCGGTCTG,-,0.00) -65(TAGCGTCG,-,0.00) -62(CGTCGGTC,+,0.00) 561_WT_peak_636 chr1 179335175 179335367 + 76 NA intron (NR_073544, intron 1 of 25) CpG 164 NR_073544 126859 Hs.658505 NM_144696 HPRD:08740 AXDND1 C1orf125 axonemal dynein light chain domain containing 1 protein-coding 0.093750 0.678756 -61(AGCCGCCT,-,0.00) 5(TTCCTGCCCT,+,0.00) -12(GTCCGCCG,-,0.00) -67(CAGCCGAGCCGC,-,0.00) 561_WT_peak_5699 chr5 40224118 40224397 + 76 NA Intergenic Intergenic 171864 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA 0.010753 0.425000 23(TGGCACGA,-,0.00) 561_WT_peak_1008 chr10 64397369 64397655 + 76 NA intron (NM_199451, intron 5 of 7) intron (NM_199451, intron 5 of 7) 117305 NM_199452 22891 Hs.22653 NM_014951 HPRD:06380 ZNF365 Su48|UAN|ZNF365D zinc finger protein 365 protein-coding 0.017483 0.445993 -50(TGGGCGGT,-,0.00) 561_WT_peak_3225 chr17 46507722 46507885 + 76 NA promoter-TSS (NM_001075099) promoter-TSS (NM_001075099) -209 NM_003726 8631 Hs.316931 NM_003726 HPRD:05396 SKAP1 HEL-S-81p|SCAP1|SKAP55 src kinase associated phosphoprotein 1 protein-coding 0.055215 0.579268 -56(CGGCTTTG,-,0.00) 561_WT_peak_907 chr10 21991800 21991941 + 76 NA intron (NM_004641, intron 14 of 23) L1MA4A|LINE|L1 168296 NM_001195626 8028 Hs.30385 NM_004641 HPRD:03874 MLLT10 AF10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 protein-coding 0.007092 0.274648 -92(AGGTTTTG,-,0.00) 561_WT_peak_4477 chr2 220118793 220119083 + 76 NA promoter-TSS (NM_006000) promoter-TSS (NM_006000) -270 NM_006000 7277 Hs.75318 NM_006000 HPRD:01851 TUBA4A H2-ALPHA|TUBA1 tubulin, alpha 4a protein-coding 0.068966 0.656357 30(TAGGTCGG,-,0.00) 116(TCGGGCCG,+,0.00) 89(CCCTTCCAGCCC,+,0.00) -158(TGCGCGGG,-,0.00) 45(CGAGGCGG,+,0.00) 561_WT_peak_6798 chr7 104584539 104584971 + 76 NA Intergenic Intergenic -17663 NR_027374 723809 Hs.124316 NR_027374 LHFPL3-AS2 - LHFPL3 antisense RNA 2 ncRNA 0.009259 0.415704 561_WT_peak_1691 chr12 49760663 49760922 + 76 NA non-coding (NR_120663, exon 1 of 15) non-coding (NR_120663, exon 1 of 15) 104 NM_001293285 65244 Hs.654826 NM_023071 HPRD:15434 SPATS2 P59SCR|SCR59|SPATA10 spermatogenesis associated, serine-rich 2 protein-coding 0.146718 0.703846 80(TCGCCGCC,+,0.00) -127(CGGGTACG,+,0.00),-107(CGCGGACG,+,0.00),-105(CGGACGCG,-,0.00) -30(TTTCCCCG,-,0.00) 81(CGCCGCCCCGCG,-,0.00) 41(CCGAGAAG,-,0.00) 561_WT_peak_5202 chr3 111335310 111335598 + 76 NA intron (NM_198196, intron 9 of 14) MIRb|SINE|MIR -21272 NM_024508 79413 Hs.136912 NM_024508 HPRD:15686 ZBED2 - zinc finger, BED-type containing 2 protein-coding 0.010417 0.508651 -94(CGTGGCTA,+,0.00) 561_WT_peak_5520 chr4 83350779 83350995 + 76 NA promoter-TSS (NM_001292017) promoter-TSS (NM_001292017) 491 NM_031372 9987 Hs.527105 NM_005463 HPRD:06185 HNRNPDL HNRNP|HNRPDL|JKTBP|JKTBP2|laAUF1 heterogeneous nuclear ribonucleoprotein D-like protein-coding 0.078704 0.635945 -97(CGGCCCTCCCGG,+,0.00) -156(GGGAGCGGAGGG,+,0.00) -101(ATCGCGGCCC,-,0.00) 561_WT_peak_6342 chr6 45345460 45345654 + 76 NA 5' UTR (NM_181356, exon 1 of 13) 5' UTR (NM_181356, exon 1 of 13) 231 NM_181356 8464 Hs.368325 NM_003599 HPRD:04254 SUPT3H SPT3|SPT3L suppressor of Ty 3 homolog (S. cerevisiae) protein-coding 0.067010 0.646154 -159(CCGCCCGA,+,0.00) -162(CCCCCGCC,-,0.00) 0(GGACTGAGAGTG,-,0.00) 561_WT_peak_1438 chr11 85339614 85339913 + 76 NA intron (NM_001256547, intron 1 of 3) intron (NM_001256547, intron 1 of 3) 146 NM_001193538 55863 Hs.525063 NM_018480 HPRD:13715 TMEM126B - transmembrane protein 126B protein-coding 0.033445 0.520000 -77(TGGTGCCG,+,0.00) 561_WT_peak_7343 chr9 93970383 93970575 + 76 NA Intergenic Intergenic -133065 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA 0.010417 0.393782 561_WT_peak_2977 chr17 2169920 2170173 + 76 NA promoter-TSS (NM_001256827) promoter-TSS (NM_001256827) -553 NM_001256827 23293 Hs.448342 NM_017575 HPRD:06502 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding 0.007905 0.456693 -70(AAGTGGTT,+,0.00) -100(CAAAACGG,+,0.00) 58(AAAGCAGCCC,-,0.00) 561_WT_peak_2524 chr15 67374648 67374778 + 76 NA intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) 16518 NM_005902 4088 Hs.727986 NM_005902 HPRD:04380 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding 0.015385 0.496183 561_WT_peak_2799 chr16 31880862 31881145 + 76 NA Intergenic Intergenic -4076 NM_003414 10308 Hs.460645 NM_003414 HPRD:06883 ZNF267 HZF2 zinc finger protein 267 protein-coding 0.007067 0.461268 -11(AACCACTT,-,0.00) 54(AGGTTTTG,-,0.00) 561_WT_peak_2377 chr14 102606258 102606448 + 76 NA promoter-TSS (NM_001017963) promoter-TSS (NM_001017963) 164 NM_001242416 91833 Hs.36859 NM_144574 HPRD:11679 WDR20 DMR WD repeat domain 20 protein-coding 0.078947 0.596859 -160(TGGCGACG,-,0.00) 561_WT_peak_793 chr1 232941097 232941500 + 76 NA exon (NM_019090, exon 1 of 1) exon (NM_019090, exon 1 of 1) 660 NM_019090 54627 Hs.160373 NM_019090 ENSG00000212916 MAP10 KIAA1383|MTR120 microtubule-associated protein 10 protein-coding 0.104218 0.693069 60(GGAGCAGGGGGA,-,0.00) 181(TGGCCCGGTGTC,+,0.00) 193(ATCCGCTT,-,0.00) 76(TCGTCGCC,+,0.00) 200(TCGGTCGC,-,0.00) -95(CCCGCGGC,-,0.00) 216(CTGCCTCTTCCG,-,0.00) 140(TTTACCCT,-,0.00) -101(GCGGAGCCCGCG,+,0.00) -69(AGCAATGGCGGC,-,0.00),97(CCCGCCGTGGCC,+,0.00) -62(GCGGCCTCGCTG,+,0.00) 561_WT_peak_3480 chr18 32622435 32622639 + 76 NA intron (NR_046177, intron 1 of 6) intron (NR_046177, intron 1 of 6) 923 NR_046177 10982 Hs.532824 NM_014268 HPRD:16157 MAPRE2 EB1|EB2|RP1 microtubule-associated protein, RP/EB family, member 2 protein-coding 0.004902 0.360976 561_WT_peak_3668 chr19 16377399 16377691 + 76 NA Intergenic Intergenic -58106 NM_016270 10365 Hs.744182 NM_016270 HPRD:03602 KLF2 LKLF Kruppel-like factor 2 protein-coding 0.044521 0.556314 -160(GCAGCCGGGTCC,-,0.00),99(GTTTACGGGCCT,-,0.00) -143(CTGTTTTG,-,0.00) 561_WT_peak_2357 chr14 99727324 99727651 + 76 NA intron (NM_022898, intron 1 of 2) intron (NM_022898, intron 1 of 2) 10563 NM_022898 64919 Hs.709690 NM_022898 HPRD:05950 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|RIT1|ZNF856B|hRIT1-alpha B-cell CLL/lymphoma 11B (zinc finger protein) protein-coding 0.024465 0.567073 18(CACCCCCAGCCC,+,0.00) -110(TTCACCCG,-,0.00) -163(CCTTCCCCTCCC,-,0.00) 561_WT_peak_5573 chr4 107237101 107237355 + 76 NA promoter-TSS (NM_001142416) promoter-TSS (NM_001142416) 195 NM_001163435 93627 Hs.151498 NM_033115 HPRD:17514 TBCK TBCKL TBC1 domain containing kinase protein-coding 0.066929 0.619608 52(GAGCGCAAGCCT,+,0.00) 33(CTTCGCGG,+,0.00) 561_WT_peak_2222 chr14 55575109 55575261 + 75 NA Intergenic Intergenic -20750 NM_001177388 3958 Hs.531081 NM_002306 HPRD:01090 LGALS3 CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2 lectin, galactoside-binding, soluble, 3 protein-coding 0.006579 0.503268 -81(CTGGGGAGGAGG,-,0.00) 561_WT_peak_4008 chr2 28613460 28613665 + 75 NA intron (NR_103831, intron 1 of 1) CpG -2217 NM_005253 2355 Hs.220971 NM_005253 FOSL2 FRA2 FOS-like antigen 2 protein-coding 0.092683 0.674757 -147(GGGGGAGGGCGG,-,0.00) -147(GGGGGAGGGCGG,-,0.00) -142(AGGGCGGGGC,-,0.00) -93(TCGCGCCG,+,0.00) -39(GCCGCGCC,+,0.00) -83(CCGACACG,-,0.00) -55(CAGGCAGGGCGC,-,0.00) 561_WT_peak_5938 chr5 137688612 137688835 + 75 NA intron (NM_016604, intron 1 of 23) CpG 438 NM_016604 51780 Hs.483486 NM_016604 HPRD:11055 KDM3B 5qNCA|C5orf7|JMJD1B|NET22 lysine (K)-specific demethylase 3B protein-coding 0.116592 0.781250 -93(GGCGGCCGAG,+,0.00) -47(CGGCCTCCCCGG,+,0.00) -75(TCGAGGCC,+,0.00) 31(CCCCCGCC,-,0.00) -145(CGGCACGG,-,0.00) -61(GCGGGGCCTGCG,+,0.00) -88(CCGAGTCG,-,0.00),-87(CGAGTCGG,+,0.00) -64(GCTGCGGGGC,+,0.00) 561_WT_peak_6940 chr8 21777357 21777579 + 75 NA intron (NM_015024, intron 1 of 27) CpG 288 NM_015024 23039 Hs.172685 NM_015024 HPRD:05846 XPO7 EXP7|RANBP16 exportin 7 protein-coding 0.139640 0.793722 -57(CCCGCCTCCCGG,+,0.00),-56(CCGCCTCCCGGG,+,0.00) -147(GGGCGCCAGCCG,+,0.00) -45(GCCGGGGG,+,0.00) -77(CCCGGAGCCCCG,+,0.00) -115(GCGCCGCCGC,-,0.00) 561_WT_peak_5187 chr3 101811405 101811849 + 75 NA Intergenic Intergenic 151924 NR_026934 152225 Hs.376768 NR_026934 ENSG00000214407 LOC152225 - uncharacterized LOC152225 ncRNA 0.009009 0.350562 -24(AAGTGGCT,+,0.00) -144(TGGTTTTG,-,0.00) 561_WT_peak_4016 chr2 30670109 30670287 + 75 NA promoter-TSS (NM_001002257) promoter-TSS (NM_001002257) 61 NM_001002257 253558 Hs.468048 NM_182551 HPRD:17458 LCLAT1 1AGPAT8|AGPAT8|ALCAT1|HSRG1849|LYCAT|UNQ1849 lysocardiolipin acyltransferase 1 protein-coding 0.123596 0.664804 -54(GGCGTCGC,-,0.00) 7(CGGCGCGA,-,0.00) 561_WT_peak_5763 chr5 56469057 56469445 + 75 NA promoter-TSS (NM_022913) promoter-TSS (NM_022913) -524 NM_022913 65056 Hs.444279 NM_022913 HPRD:16333 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding 0.126289 0.730077 -20(GAGCGCGAGGCC,+,0.00) -146(CGCGTTCG,+,0.00) 24(CAGCGTCTTCCG,-,0.00),86(GGGAAGACGCTG,+,0.00),211(CGGGAGGAGGGG,+,0.00) 118(TGCGCGGC,-,0.00),159(TGCGCAGC,-,0.00) -94(CGCCGGCTCGGC,-,0.00) 18(GCGCCGCAGC,-,0.00),55(GCTGCGGCGC,+,0.00),58(GCGGCGCAGC,+,0.00),58(GCGGCGCAGC,-,0.00),94(GCTGCGGCGC,+,0.00),127(GCTTCCCGGC,-,0.00) -31(CACCCAGGCCCG,-,0.00) 561_WT_peak_3027 chr17 7819419 7819777 + 75 NA promoter-TSS (NR_024349) promoter-TSS (NR_024349) -333 NR_024349 284023 Hs.744470 NR_024349 ENSG00000179859 LOC284023 - uncharacterized LOC284023 ncRNA 0.100559 0.676880 -113(TCGCCCCGCTCC,+,0.00) 177(GGCGGCCCAG,+,0.00) 20(GGGCCGGCGCCG,-,0.00) -70(TCGTGCCC,+,0.00),97(TCGGGCCG,+,0.00),115(CGGCACGT,-,0.00) -46(CGTCGCTA,+,0.00) -116(AGCTCGCCCCGC,-,0.00),17(CTGGGGCCGGCG,+,0.00),21(GGCCGGCGCCGC,-,0.00) -39(AACGCGGCCA,-,0.00),2(GGGCCGGGTC,+,0.00),99(GGGCCGCTCC,+,0.00) 561_WT_peak_3141 chr17 36003123 36003449 + 75 NA intron (NM_001291476, intron 1 of 15) CpG 207 NM_001291476 11056 Hs.590937 NM_007010 HPRD:09911 DDX52 HUSSY19|ROK1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 protein-coding 0.076687 0.596330 101(AAGCGTCT,+,0.00) -35(GAGAGCCAGGCC,+,0.00) 108(TCGTGTCG,+,0.00) 130(GCCGAGCCGGCG,+,0.00) 45(TACTCGGCCC,-,0.00) 96(CCGAGAAG,-,0.00) -33(GAGCCAGGCCAC,-,0.00) 561_WT_peak_2942 chr16 87902616 87902974 + 75 NA exon (NM_003486, exon 1 of 10) exon (NM_003486, exon 1 of 10) 305 NM_003486 8140 Hs.513797 NM_003486 HPRD:02552 SLC7A5 4F2LC|CD98|D16S469E|E16|LAT1|MPE16|hLAT1 solute carrier family 7 (amino acid transporter light chain, L system), member 5 protein-coding 0.122905 0.685237 -98(TCGCCGCC,+,0.00),139(GGCGCCGA,-,0.00) -9(CAGCGCCAGCCC,+,0.00) -28(CGCACGCG,-,0.00),149(CGTCCGCG,-,0.00) -95(CCGCCCGA,+,0.00) -76(TGGTGCCG,+,0.00),36(CGTCACGA,-,0.00) 171(CATCTTCTCCCG,-,0.00) -26(CACGCGGCCC,-,0.00) -64(CCGCGTAG,-,0.00),159(CTTGGCGG,+,0.00) 561_WT_peak_2389 chr14 105948168 105948708 + 75 NA Intergenic Intergenic -4819 NM_001311 1396 Hs.70327 NM_001311 HPRD:00469 CRIP1 CRHP|CRIP|CRP-1|CRP1 cysteine-rich protein 1 (intestinal) protein-coding 0.035185 0.619224 68(GAAACCGGGGCG,-,0.00) 199(AGCCGCCT,-,0.00) 145(CGGCACTA,-,0.00) 106(CGTCGCTA,+,0.00) 192(CCCTCCCAGCCG,+,0.00) 116(CGGTGTTG,-,0.00) -146(TGGGCGGC,-,0.00) -56(CCCTGACCCCGC,-,0.00) 12(GGGCCGGTTT,+,0.00) 111(CTAGGCGG,+,0.00) -49(CCCGCCAGGGAC,+,0.00) 561_WT_peak_4532 chr2 242702330 242702683 + 75 NA intron (NR_109778, intron 7 of 7) intron (NR_109778, intron 7 of 7) -13734 NM_022134 64090 Hs.632556 NM_022134 HPRD:16303 GAL3ST2 GAL3ST-2|GP3ST galactose-3-O-sulfotransferase 2 protein-coding 0.036827 0.542373 561_WT_peak_4085 chr2 61403924 61404297 + 75 NA promoter-TSS (NM_152392) promoter-TSS (NM_152392) -445 NM_152392 130872 Hs.655602 NM_152392 HPRD:16479 AHSA2 Hch1 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast) protein-coding 0.091153 0.569519 -32(GGGGGAGGGCGA,-,0.00) 94(AGCGACCT,-,0.00) -40(CCGGGAAGGGGG,-,0.00) -4(AAAAACCG,+,0.00) 63(TGCGCGCT,-,0.00) -13(CGTCGCGG,+,0.00) 561_WT_peak_6212 chr6 27760021 27760191 + 75 NA Intergenic Intergenic 15603 NM_003519 8340 Hs.137594 NM_003519 HPRD:11898 HIST1H2BL H2B/c|H2BFC|dJ97D16.4 histone cluster 1, H2bl protein-coding 0.041176 0.467836 -39(TCGACGCC,+,0.00) -136(CGCCACGA,-,0.00) 561_WT_peak_740 chr1 224033886 224034238 + 75 NA promoter-TSS (NM_005426) promoter-TSS (NM_005426) -388 NM_005426 7159 Hs.523968 NM_005426 HPRD:11803 TP53BP2 53BP2|ASPP2|BBP|P53BP2|PPP1R13A tumor protein p53 binding protein 2 protein-coding 0.110795 0.702550 19(GGCGGCCGCG,+,0.00) -86(GGGCTGCCGCCG,-,0.00) 69(AGGCCCGGGC,-,0.00) -13(GCCCGACG,-,0.00) -136(GCCGCGCC,+,0.00),23(GCCGCGCC,+,0.00) -158(GCGGAGCCGGGG,+,0.00),31(GCTGGGCCAGGC,+,0.00) -159(AGCGGAGCCGGG,+,0.00),-64(GGCGGCTCCGAG,-,0.00) -57(CCGAGTCG,-,0.00) 561_WT_peak_4317 chr2 136806862 136807046 + 75 NA Intergenic Intergenic -63700 NM_001293312 1615 Hs.503787 NM_001349 HPRD:04361 DARS HBSL|aspRS aspartyl-tRNA synthetase protein-coding 0.005435 0.443243 561_WT_peak_3740 chr19 37157877 37158106 + 75 NA promoter-TSS (NM_001297623) promoter-TSS (NM_001297623) -236 NM_001297623 92283 Hs.590972 NM_153257 HPRD:16358 ZNF461 GIOT-1|GIOT1 zinc finger protein 461 protein-coding 0.087336 0.578261 20(GTCCGAAG,-,0.00) 561_WT_peak_6263 chr6 30477048 30477241 + 75 NA Intergenic Intergenic 19961 NM_005516 3133 Hs.650174 NM_005516 HPRD:00877 HLA-E EA1.2|EA2.1|HLA-6.2|MHC|QA1 major histocompatibility complex, class I, E protein-coding 0.005181 0.345361 -83(GAACCAGGAAGT,+,0.00) 561_WT_peak_6725 chr7 75247253 75247438 + 75 NA intron (NM_005338, intron 1 of 30) intron (NM_005338, intron 1 of 30) -89892 NR_028059 5387 Hs.659871 NM_005395 HPRD:17866 PMS2P3 PMS2L3|PMS2L9|PMS5|PMSR3 postmeiotic segregation increased 2 pseudogene 3 pseudo 0.021622 0.575269 561_WT_peak_1472 chr11 107879605 107880057 + 75 NA 5' UTR (NM_003478, exon 1 of 19) 5' UTR (NM_003478, exon 1 of 19) 423 NM_003478 8065 Hs.440320 NM_003478 HPRD:03444 CUL5 VACM-1|VACM1 cullin 5 protein-coding 0.112832 0.673289 -9(GGAGTCGA,-,0.00) -140(TCCCCGCCCT,+,0.00) 260(CGCCACGA,-,0.00) 200(GGCCGACG,-,0.00) 0(GCTTCCTCTTCC,-,0.00) -100(GCTGCGGGGC,+,0.00) 561_WT_peak_4368 chr2 174828096 174828416 + 75 NA intron (NM_001172712, intron 3 of 6) intron (NM_001172712, intron 3 of 6) 691 NM_001017371 6670 Hs.531587 NM_003111 HPRD:03483 SP3 SPR2 Sp3 transcription factor protein-coding 0.053125 0.507788 -22(CCCCCGCC,-,0.00) -16(CCCTCTCAGACT,+,0.00) 65(CCAAACCG,+,0.00) 134(CGCGGGCGCCGG,-,0.00) 561_WT_peak_3986 chr2 25496237 25496407 + 75 NA intron (NM_175629, intron 6 of 22) intron (NM_175629, intron 6 of 22) -21138 NM_153759 1788 Hs.515840 NM_022552 HPRD:04141 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA (cytosine-5-)-methyltransferase 3 alpha protein-coding 0.041176 0.555556 -55(GGGGTAAA,+,0.00) -146(ACCGCGCC,+,0.00) -78(GGGCCGCCTT,+,0.00) 561_WT_peak_6806 chr7 105490030 105490202 + 75 NA intron (NM_152749, intron 2 of 3) intron (NM_152749, intron 2 of 3) 26915 NM_020725 222255 Hs.745056 NM_020725 HPRD:12508 ATXN7L1 ATXN7L4 ataxin 7-like 1 protein-coding 0.000000 0.502890 561_WT_peak_952 chr10 35484513 35484812 + 75 NA promoter-TSS (NM_182724) promoter-TSS (NM_182724) -168 NM_001267570 1390 Hs.200250 NM_001881 HPRD:00444 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding 0.026756 0.400000 561_WT_peak_1460 chr11 95657084 95657379 + 75 NA 5' UTR (NM_201278, exon 1 of 17) 5' UTR (NM_201278, exon 1 of 17) 140 NM_001243571 8898 Hs.181326 NM_016156 HPRD:04650 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding 0.101695 0.695946 -17(CCGGGAGGGAGA,-,0.00) 80(GGCATCGA,-,0.00) -27(CAGCGCCGGCCC,+,0.00) -75(CGGGAGAAGCGG,+,0.00) -9(GAGACCGGAAGC,+,0.00) 24(ACCGCGCC,+,0.00),61(ACTGCGCA,+,0.00),63(TGCGCAGC,-,0.00) -24(CGCCGGCCCGGG,-,0.00) -91(CTTCGCGG,+,0.00) 561_WT_peak_4600 chr20 31560027 31560307 + 75 NA Intergenic Intergenic 32072 NM_080675 140732 Hs.375186 NM_080675 HPRD:15422 SUN5 SPAG4L|TSARG4|dJ726C3.1 Sad1 and UNC84 domain containing 5 protein-coding 0.017857 0.483986 -132(GGGCACGA,-,0.00) 74(CAAAACCA,+,0.00) 561_WT_peak_456 chr1 146644171 146644418 + 75 NA promoter-TSS (NM_005399) promoter-TSS (NM_005399) -126 NM_005399 5565 Hs.50732 NM_005399 HPRD:04117 PRKAB2 - protein kinase, AMP-activated, beta 2 non-catalytic subunit protein-coding 0.109312 0.737903 -142(TCGGCGCC,+,0.00) -111(CGCCGCCGCCGC,-,0.00),-108(CGCCGCCGCCGC,-,0.00) -100(CCGCCTCG,-,0.00) 561_WT_peak_343 chr1 101472287 101472498 + 75 NA intron (NM_001077395, intron 4 of 7) intron (NM_001077395, intron 4 of 7) 18970 NM_015958 51611 Hs.440776 NM_015958 DPH5 CGI-30|HSPC143|NPD015 diphthamide biosynthesis 5 protein-coding 0.000000 0.316038 561_WT_peak_1239 chr11 31531354 31531540 + 75 NA promoter-TSS (NM_144981) promoter-TSS (NM_144981) 171 NM_019040 26610 Hs.175534 NM_019040 HPRD:07377 ELP4 AN|C11orf19|PAX6NEB|PAXNEB|dJ68P15A.1|hELP4 elongator acetyltransferase complex subunit 4 protein-coding 0.080645 0.636364 13(TCCCAGCCCT,+,0.00) -65(ACAGCGGCCC,-,0.00) 561_WT_peak_34 chr1 6662528 6662715 + 75 NA exon (NM_014851, exon 1 of 4) exon (NM_014851, exon 1 of 4) 308 NM_014851 9903 Hs.7764 NM_014851 HPRD:17239 KLHL21 - kelch-like family member 21 protein-coding 0.144385 0.734043 10(GGGCTGGCGGCG,-,0.00) 1(CGGAAGTAGGGG,+,0.00) -36(GGCGCGGC,-,0.00) -148(CGCGCAGCAGCG,+,0.00),-140(AGCGGCTCAGCG,-,0.00) -111(CACGCGGCCC,-,0.00) -115(CCGCCACG,-,0.00) 561_WT_peak_5900 chr5 131392037 131392359 + 75 NA Intergenic Intergenic -4149 NM_000588 3562 Hs.694 NM_000588 HPRD:00987 IL3 IL-3|MCGF|MULTI-CSF interleukin 3 protein-coding 0.009317 0.613003 -47(GGGCTGGCTCTC,-,0.00) 561_WT_peak_3493 chr18 43678460 43678637 + 75 NA promoter-TSS (NM_001257335) promoter-TSS (NM_001257335) -229 NM_004046 498 Hs.298280 NM_004046 HPRD:01258 ATP5A1 ATP5A|ATP5AL2|ATPM|HEL-S-123m|MC5DN4|MOM2|OMR|ORM|hATP1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle protein-coding 0.045198 0.550562 -17(GGACCAGGGCGA,-,0.00) 561_WT_peak_4039 chr2 42332592 42332784 + 75 NA Intergenic Intergenic 57527 NM_138370 91461 Hs.408542 NM_138370 HPRD:18707 PKDCC SGK493|Vlk protein kinase domain containing, cytoplasmic protein-coding 0.010417 0.450777 -153(CAGGCCATGGCC,+,0.00),-151(GGCCATGGCCAG,-,0.00) 561_WT_peak_7304 chr9 75747366 75747593 + 75 NA Intergenic Intergenic -19302 NM_000700 301 Hs.494173 NM_000700 HPRD:01060 ANXA1 ANX1|LPC1 annexin A1 protein-coding 0.026432 0.473684 -101(GCTTCGGAGC,-,0.00) 561_WT_peak_6669 chr7 50306456 50306801 + 75 NA Intergenic Intergenic -37051 NM_001291839 10320 Hs.435949 NM_006060 HPRD:04318 IKZF1 Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 (Ikaros) protein-coding 0.023188 0.546243 -72(GGGAAGAGGGGG,+,0.00) -56(GCGGGGCCGCGG,+,0.00) -57(GGCGGGGCCGCG,+,0.00) -18(GCCTTGCAGC,-,0.00) 561_WT_peak_6344 chr6 47445185 47445991 + 75 NA promoter-TSS (NM_012120) promoter-TSS (NM_012120) 63 NM_012120 23607 Hs.485518 NM_012120 HPRD:05026 CD2AP CMS CD2-associated protein protein-coding 0.110422 0.706320 579(GGAGGAGGAGGA,-,0.00),582(GGAGGAGGAGGA,-,0.00),585(GGAGGAGGAGGA,-,0.00) -154(TCGCCGCC,+,0.00),417(TCGCCGCC,+,0.00) 263(AGGCGGGCGCTC,-,0.00) 84(CGAACGCG,-,0.00) 13(GCGGTCGG,-,0.00),348(GCGGTCGG,-,0.00),352(TCGGGCGG,-,0.00) 244(AGGGGCGGGC,-,0.00) 28(CCCCCGGC,-,0.00),471(GCCGCGGG,+,0.00),549(GCCGCGGG,+,0.00) 605(CGGCTTCTCCCC,-,0.00) 341(GAAAACCG,+,0.00) 280(TGGAGCCGAGGG,+,0.00) 532(CGCGGGTCCCGC,-,0.00) 441(GGGCCGCGCT,+,0.00) -159(CCGCGTCG,-,0.00),167(CTTCTCGG,+,0.00),261(CTAGGCGG,+,0.00) 378(GCCGCCGTGGCT,+,0.00) -157(GCGTCGCCGC,-,0.00) 328(GCGGCCAGGGTG,+,0.00) 561_WT_peak_5824 chr5 76787967 76788246 + 75 NA 5' UTR (NM_018268, exon 1 of 13) 5' UTR (NM_018268, exon 1 of 13) 226 NM_018268 55255 Hs.482573 NM_018268 WDR41 - WD repeat domain 41 protein-coding 0.082437 0.660714 -115(TCGGCCTCCCCC,+,0.00),-25(TCGGCCTCCTCC,+,0.00) -116(CTCGGCCTCC,-,0.00),-26(CTCGGCCTCC,-,0.00) 12(AGACGCTA,-,0.00) -114(CGGCCTCCCCCG,+,0.00),-14(CTTCCTCCCCGG,+,0.00) -53(CCCAGTCAGCCC,+,0.00) -40(AACTCCGCCC,-,0.00) 561_WT_peak_3886 chr19 53606865 53607061 + 75 NA promoter-TSS (NM_033288) promoter-TSS (NM_033288) -276 NM_033288 90338 Hs.655967 NM_033288 HPRD:11856 ZNF160 F11|HKr18|HZF5|KR18 zinc finger protein 160 protein-coding 0.102041 0.741117 -105(GGAGGAAGGCGA,-,0.00) -160(CCGGGGAGGAGC,-,0.00) -139(AGGGCGGGGA,-,0.00) -46(GGGGAGAGGCGG,+,0.00) -102(GGAAGGCGAAGG,+,0.00) 561_WT_peak_4943 chr22 42084652 42084849 + 75 NA intron (NM_005008, intron 1 of 3) CpG 163 NM_005008 4809 Hs.182255 NM_005008 HPRD:03197 NHP2L1 15.5K|FA-1|FA1|NHPX|OTK27|SNRNP15-5|SNU13|SPAG12|SSFA1 NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) protein-coding 0.096447 0.656566 -40(CTCGGCCGGC,-,0.00) -55(CCCGCTTCCCGG,+,0.00) -39(TCGGCCGG,-,0.00) -12(TGCGGTTCCGCG,-,0.00) -21(CACCATGGCTGC,-,0.00) 561_WT_peak_7611 chrX 129402894 129403132 + 75 NA promoter-TSS (NM_017666) promoter-TSS (NM_017666) -91 NM_017666 55609 Hs.308418 NM_017666 HPRD:06526 ZNF280C SUHW3|ZNF633 zinc finger protein 280C protein-coding 0.063025 0.510460 -133(TAGACGCC,+,0.00) -97(TTTAACCG,-,0.00) -93(ACCGCCCA,+,0.00) 561_WT_peak_4426 chr2 198569565 198569869 + 75 NA promoter-TSS (NM_138395) promoter-TSS (NM_138395) -311 NM_138395 92935 Hs.744330 NM_138395 HPRD:14363 MARS2 MetRS|mtMetRS methionyl-tRNA synthetase 2, mitochondrial protein-coding 0.019737 0.403279 2(AAACGGCT,+,0.00) 561_WT_peak_3262 chr17 56405985 56406156 + 75 NA promoter-TSS (NR_038412) promoter-TSS (NR_038412) 82 NM_024418 9256 Hs.112499 NM_004758 HPRD:09832 BZRAP1 PBR-IP|PRAX-1|PRAX1|RIM-BP1|RIMBP1 benzodiazepine receptor (peripheral) associated protein 1 protein-coding 0.023392 0.633721 561_WT_peak_6236 chr6 28234673 28234991 + 75 NA promoter-TSS (NM_001023560) promoter-TSS (NM_001023560) 44 NM_001111039 7741 Hs.157883 NM_007151 ZSCAN26 SRE-ZBP|ZNF187 zinc finger and SCAN domain containing 26 protein-coding 0.044025 0.492163 -42(CCCTCCCAGCCG,+,0.00) 561_WT_peak_242 chr1 53102826 53103219 + 75 NA intron (NM_001042693, intron 1 of 2) intron (NM_001042693, intron 1 of 2) 3956 NM_001042693 348378 Hs.424589 NM_182621 HPRD:14678 FAM159A PRO7171|WWLS2783 family with sequence similarity 159, member A protein-coding 0.012723 0.469543 -152(AGGTGGCT,+,0.00) 561_WT_peak_3314 chr17 64709702 64709888 + 75 NA intron (NM_002737, intron 8 of 16) intron (NM_002737, intron 8 of 16) -73395 NR_030364 693219 NR_030364 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA 0.021505 0.454545 -39(AAGTGGCT,+,0.00) 561_WT_peak_398 chr1 115124361 115124644 + 75 NA promoter-TSS (NM_005872) promoter-TSS (NM_005872) -237 NM_005872 10286 Hs.22960 NM_005872 HPRD:05777 BCAS2 DAM1|SPF27|Snt309 breast carcinoma amplified sequence 2 protein-coding 0.045936 0.514085 -36(GGCGGCGA,-,0.00) 561_WT_peak_3271 chr17 57286941 57287119 + 75 NA promoter-TSS (NM_018149) promoter-TSS (NM_018149) -341 NM_018149 55181 Hs.7296 NM_018149 HPRD:08551 SMG8 C17orf71 SMG8 nonsense mediated mRNA decay factor protein-coding 0.056180 0.564246 -112(CCGCCTCCCGGG,+,0.00) -40(CGCCCGGC,-,0.00) -73(CCGAGTAG,-,0.00) 561_WT_peak_4039-2 chr2 42332990 42333269 + 75 NA Intergenic Intergenic 57968 NM_138370 91461 Hs.408542 NM_138370 HPRD:18707 PKDCC SGK493|Vlk protein kinase domain containing, cytoplasmic protein-coding 0.010753 0.496429 561_WT_peak_3596 chr19 6481857 6481997 + 75 NA promoter-TSS (NM_001290331) promoter-TSS (NM_001290331) -108 NM_001290331 79958 Hs.236449 NM_024898 HPRD:13304 DENND1C FAM31C DENN/MADD domain containing 1C protein-coding 0.028571 0.631206 -99(CTGGGAAGGCAG,-,0.00) -39(TCGTGCCT,+,0.00) -79(CTCCGTCCCCGC,-,0.00) 561_WT_peak_4496 chr2 232651087 232651259 + 75 NA promoter-TSS (NM_022730) promoter-TSS (NM_022730) 80 NM_001282952 64708 Hs.335061 NM_022730 HPRD:09889 COPS7B CSN7B|SGN7b COP9 signalosome subunit 7B protein-coding 0.110465 0.693642 -48(GGAGGCCGAG,+,0.00) -36(AGCGACTA,-,0.00) -51(CCGGGAGGCCGA,-,0.00) -13(GGCGTGGA,-,0.00) -60(GGGCAGGCGCCG,-,0.00) -100(CGCCGGAC,+,0.00) -44(GCCGAGCCAGCG,+,0.00) 561_WT_peak_5905 chr5 131812822 131812969 + 75 NA Intergenic Intergenic 13570 NM_002198 3659 Hs.436061 NM_002198 HPRD:00961 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding 0.006803 0.472973 561_WT_peak_5182 chr3 101497780 101498042 + 74 NA promoter-TSS (NM_001134456) promoter-TSS (NM_001134456) -118 NM_145037 91775 Hs.595933 NM_145037 HPRD:10073 NXPE3 FAM55C|MST115 neurexophilin and PC-esterase domain family, member 3 protein-coding 0.106870 0.661597 -18(GGCGTAGA,-,0.00),52(TCAACGCC,+,0.00) 29(CGCCCGGC,-,0.00),69(CCCCCGCC,-,0.00) -39(CGTCGCGA,+,0.00) -112(GTCCGAAG,-,0.00) 58(CCCTCGGCCCGC,-,0.00) -24(CTTGGCGG,+,0.00) 561_WT_peak_661 chr1 192485988 192486238 + 74 NA Intergenic Intergenic -58744 NM_002922 5996 Hs.75256 NM_002922 HPRD:15968 RGS1 1R20|BL34|HEL-S-87|IER1|IR20 regulator of G-protein signaling 1 protein-coding 0.020000 0.422311 561_WT_peak_7405 chr9 117481190 117481455 + 74 NA Intergenic Intergenic -36953 NM_001199233 100505478 Hs.200101 NM_001199233 LOC100505478 - uncharacterized LOC100505478 protein-coding 0.026415 0.522556 561_WT_peak_4237 chr2 101869528 101869737 + 74 NA exon (NM_017546, exon 1 of 7) exon (NM_017546, exon 1 of 7) 287 NM_017546 55571 Hs.744080 NM_017546 HPRD:12812 CNOT11 C2orf29 CCR4-NOT transcription complex, subunit 11 protein-coding 0.105263 0.728571 -38(GGAGGAGGCGGG,-,0.00),-35(GGAGGCGGGCGG,-,0.00) -151(GGCGGCAGAG,+,0.00) -149(CGGCAGAGGCGG,+,0.00),-39(CGGAGGAGGCGG,+,0.00) -141(GCGGAGCAAGCG,+,0.00) -135(CAAGCGGCCC,-,0.00) 22(CAGCAAGGCCGA,-,0.00) 561_WT_peak_68 chr1 14075376 14075597 + 74 NA promoter-TSS (NM_001007257) promoter-TSS (NM_001007257) -390 NM_001007257 7799 Hs.371823 NM_012231 HPRD:03120 PRDM2 HUMHOXY1|KMT8|MTB-ZF|RIZ|RIZ1|RIZ2 PR domain containing 2, with ZNF domain protein-coding 0.072398 0.509009 33(TAAACAGGAAAC,+,0.00) -17(AAATGGGCCC,-,0.00) 561_WT_peak_2486 chr15 52472274 52472473 + 74 NA promoter-TSS (NM_006578) promoter-TSS (NM_006578) 150 NR_102751 100129973 Hs.569494 NR_102751 LOC100129973 - uncharacterized LOC100129973 ncRNA 0.070352 0.650000 -129(CGGGAGAGGCAG,+,0.00) -101(TTTACCAG,-,0.00),-93(CGGGCAAA,+,0.00),-61(TTTGCCCG,-,0.00) 561_WT_peak_1369 chr11 65627872 65628135 + 74 NA 5' UTR (NM_025128, exon 1 of 16) 5' UTR (NM_025128, exon 1 of 16) 131 NM_025128 80198 Hs.288798 NM_025128 HPRD:09419 MUS81 SLX3 MUS81 structure-specific endonuclease subunit protein-coding 0.064639 0.655303 -25(AACCACTT,-,0.00) 88(CCCCCGCC,-,0.00) -6(GGGGTGGGAGGG,-,0.00) 88(CCCCCGCCCCGC,-,0.00) 561_WT_peak_450 chr1 145826689 145826863 + 74 NA promoter-TSS (NR_104217).2 promoter-TSS (NR_104217).2 327 NM_001097613 653519 Hs.504320 NM_001097612 ENSG00000117262 GPR89A GPHR|GPR89|GPR89B|SH120|UNQ192 G protein-coupled receptor 89A protein-coding 0.103448 0.691429 -74(CGCGTAAG,+,0.00) 561_WT_peak_3915 chr19 57901262 57901597 + 74 NA 5' UTR (NM_001172773, exon 1 of 4) 5' UTR (NM_001172773, exon 1 of 4) 211 NM_001172773 147694 Hs.126905 NM_152909 ZNF548 - zinc finger protein 548 protein-coding 0.068657 0.648810 -90(AAGCGGCT,+,0.00) 81(CCGCCCGACCGG,+,0.00) 81(CCGCCCGA,+,0.00),85(CCGACCGG,+,0.00) 78(CCCCCGCC,-,0.00) -96(CGCGAGAAGCGG,+,0.00) -129(GTCTGACG,-,0.00) -3(CTCCCGCCCCGC,-,0.00) 75(GCTCCCCCGC,-,0.00) 30(GAGGCCTTGCTG,+,0.00) 561_WT_peak_201 chr1 42921572 42921797 + 74 NA promoter-TSS (NM_001287508) promoter-TSS (NM_001287508) 254 NM_001146192 84217 Hs.294009 NM_032257 HPRD:15740 ZMYND12 - zinc finger, MYND-type containing 12 protein-coding 0.080000 0.646018 -140(CGGCTGGGGCTT,-,0.00) -156(GCCGCGCA,+,0.00) 8(CGCGGGGCTGCG,+,0.00) 561_WT_peak_3595 chr19 6460229 6460484 + 74 NA promoter-TSS (NM_024103) promoter-TSS (NM_024103) -575 NM_024103 79085 Hs.356231 NM_024103 HPRD:16381 SLC25A23 APC2|MCSC2|SCaMC-3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23 protein-coding 0.082353 0.648438 -128(CCTTCTTCCCGC,+,0.00),-9(CCGCCCGCCCCG,+,0.00) -110(GCTTCCTTTCTC,-,0.00) -60(GGCGCGGC,-,0.00) -8(CGCCCGCCCCGC,-,0.00) 16(CTAGGCGG,+,0.00) -62(GCGGCGCGGCTG,+,0.00) 561_WT_peak_4464 chr2 214149144 214149433 + 74 NA promoter-TSS (NM_001242575) promoter-TSS (NM_001242575) 185 NR_047659 79582 Hs.743365 NM_024532 HPRD:18089 SPAG16 PF20|WDR29 sperm associated antigen 16 protein-coding 0.100346 0.700000 7(GGCGGCTGAG,+,0.00) 6(TGGCGGCT,+,0.00) -24(CCGGGGACGCGA,-,0.00) -3(CGGACGCG,-,0.00) -148(TAGGGACG,-,0.00) -6(CGGCGGAC,+,0.00) 72(CGGGTAAT,+,0.00) 52(GGCGCGGC,-,0.00) 46(CGTGGAGGCGCG,+,0.00) 52(GGCGCGGCCC,-,0.00) 561_WT_peak_1141 chr10 111682931 111683215 + 74 NA intron (NM_020383, intron 1 of 20) CpG 238 NM_001167604 7511 Hs.390623 NM_020383 HPRD:03899 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble protein-coding 0.140845 0.761404 108(GTGCCCCAGCCC,+,0.00) -152(CCCACCGA,+,0.00) -46(CGGGCCGGGC,-,0.00),-22(TCCCTGCCCG,+,0.00) -121(CGCCCGGC,-,0.00),-99(CCCCCGGC,-,0.00) -105(CCCCTTCCCCCG,-,0.00) 7(GCCGCGCA,+,0.00) 1(CGCGCGGCCGCG,+,0.00) -70(AGCGCGGCCC,-,0.00),-45(GGGCCGGGCT,+,0.00) 7(GCCGCGCAGC,-,0.00) 561_WT_peak_113 chr1 25559233 25559608 + 74 NA promoter-TSS (NM_015484) promoter-TSS (NM_015484) -407 NM_207170 25949 Hs.20013 NM_015484 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA-splicing factor protein-coding 0.024000 0.454787 -63(GCCTCGCAGG,-,0.00) 561_WT_peak_943 chr10 32666616 32666896 + 74 NA intron (NM_001282391, intron 1 of 13) intron (NM_001282391, intron 1 of 13) 970 NM_001282391 80314 Hs.167805 NM_025209 HPRD:09941 EPC1 Epl1 enhancer of polycomb homolog 1 (Drosophila) protein-coding 0.010714 0.334520 561_WT_peak_1994 chr13 37574085 37574224 + 74 NA promoter-TSS (NM_013338) promoter-TSS (NM_013338) -524 NM_181503 11340 Hs.294041 NM_181503 HPRD:09351 EXOSC8 CIP3|EAP2|OIP2|RRP43|Rrp43p|bA421P11.3|p9 exosome component 8 protein-coding 0.071942 0.592857 561_WT_peak_3800 chr19 45954951 45955116 + 74 NA Intergenic Intergenic -16220 NM_001114171 2354 Hs.590958 NM_006732 HPRD:01270 FOSB AP-1|G0S3|GOS3|GOSB FBJ murine osteosarcoma viral oncogene homolog B protein-coding 0.006061 0.481928 -112(CAAAACTG,+,0.00) 561_WT_peak_6458 chr6 119635121 119635340 + 74 NA intron (NM_005907, intron 2 of 12) intron (NM_005907, intron 2 of 12) 35701 NM_005907 4121 Hs.102788 NM_005907 HPRD:05066 MAN1A1 HUMM3|HUMM9|MAN9 mannosidase, alpha, class 1A, member 1 protein-coding 0.018265 0.513636 -31(ATGTGGCT,+,0.00) 561_WT_peak_1178 chr11 314036 314315 + 74 NA exon (NM_003641, exon 1 of 2) exon (NM_003641, exon 1 of 2) 184 NM_003641 8519 Hs.458414 NM_003641 HPRD:05122 IFITM1 9-27|CD225|DSPA2a|IFI17|LEU13 interferon induced transmembrane protein 1 protein-coding 0.039427 0.571429 -10(AGGTGGCT,+,0.00) -106(ACAGCGGCCC,-,0.00) 561_WT_peak_5274 chr3 141030479 141030819 + 74 NA Intergenic CpG -12406 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding 0.085294 0.609971 -24(AAGCCTCT,+,0.00) -123(CGCGCACG,+,0.00) 69(CGGGCAGGGA,-,0.00) 105(TGGGCGGT,-,0.00) 561_WT_peak_1267 chr11 46615305 46615599 + 74 NA 5' UTR (NM_001267783, exon 1 of 18) 5' UTR (NM_001267783, exon 1 of 18) 167 NM_001300731 55626 Hs.654644 NM_017749 HPRD:10975 AMBRA1 DCAF3|WDR94 autophagy/beclin-1 regulator 1 protein-coding 0.091837 0.640678 23(AGGCGGCT,+,0.00) -124(GGGCTGGGCCTC,-,0.00) 8(CCGACCGG,+,0.00) -143(CCCGCGGC,-,0.00) 13(CGGCAGGA,-,0.00) 71(CGCCGCCGCCGC,-,0.00) 35(CGCGGGGCCTCG,+,0.00) 52(AACTCAGCCC,-,0.00) 70(GCGCCGCCGC,-,0.00) 561_WT_peak_4513 chr2 237445517 237445623 + 74 NA Intergenic MIRb|SINE|MIR -29392 NR_073043 79781 Hs.591594 NM_024726 HPRD:13743 IQCA1 4930465P12Rik|DRC11|IQCA IQ motif containing with AAA domain 1 protein-coding 0.009434 0.495327 561_WT_peak_5833 chr5 79703442 79703671 + 74 NA promoter-TSS (NM_014733) promoter-TSS (NM_014733) -276 NM_001284236 9765 Hs.482660 NM_014733 HPRD:10319 ZFYVE16 PPP1R69 zinc finger, FYVE domain containing 16 protein-coding 0.091703 0.652174 -130(CCGGGAAGGCGG,-,0.00) 34(CCGACCTA,+,0.00) -40(TAGCGAAG,-,0.00) -34(AGGGTAAA,+,0.00) -95(GCCGCGCA,+,0.00) 561_WT_peak_3995 chr2 27008473 27008731 + 74 NA promoter-TSS (NM_001042426) promoter-TSS (NM_001042426) -280 NM_001809 1058 Hs.1594 NM_001809 HPRD:00313 CENPA CENP-A|CenH3 centromere protein A protein-coding 0.034884 0.474903 -91(AAGCGACT,+,0.00),-90(AGCGACTT,-,0.00) -124(CGTTGCTA,+,0.00) 561_WT_peak_842 chr10 1015737 1015949 + 74 NA Intergenic Intergenic -18506 NM_012341 23560 Hs.215766 NM_012341 HPRD:09976 GTPBP4 CRFG|NGB|NOG1 GTP binding protein 4 protein-coding 0.028302 0.549296 -16(GGGACCGTAAGC,+,0.00) 561_WT_peak_3871 chr19 50861937 50862136 + 74 NA exon (NM_004851, exon 9 of 9) exon (NM_004851, exon 9 of 9) 6895 NM_004851 9476 Hs.512843 NM_004851 HPRD:07064 NAPSA KAP|Kdap|NAP1|NAPA|SNAPA napsin A aspartic peptidase protein-coding 0.065327 0.620000 -110(AGGGCCTGGA,-,0.00) 561_WT_peak_5351 chr3 186649707 186649886 + 74 NA intron (NM_173216, intron 1 of 7) intron (NM_173216, intron 1 of 7) 1481 NM_173217 6480 Hs.207459 NM_003032 HPRD:00184 ST6GAL1 SIAT1|ST6GalI|ST6N ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 protein-coding 0.067039 0.594444 -23(GCGCCGCCGC,-,0.00) 561_WT_peak_3074 chr17 19881477 19881714 + 74 NA promoter-TSS (NM_007202) promoter-TSS (NM_007202) -426 NM_007202 11216 Hs.642676 NM_007202 HPRD:05259 AKAP10 AKAP-10|D-AKAP-2|D-AKAP2|PRKA10 A kinase (PRKA) anchor protein 10 protein-coding 0.059072 0.609244 -131(TCGACCCC,+,0.00) -84(CGGCACGA,-,0.00) -33(CCGCCACG,-,0.00) -34(CCCGCCACGGCC,+,0.00) 561_WT_peak_6838 chr7 128694735 128694945 + 74 NA promoter-TSS (NR_002187) promoter-TSS (NR_002187) 387 NM_012470 23534 Hs.193613 NM_012470 HPRD:18209 TNPO3 IPO12|LGMD1F|MTR10A|TRN-SR|TRN-SR2|TRNSR transportin 3 protein-coding 0.090476 0.639810 -11(CCGCCTTCGCGC,+,0.00) -54(TAGCGACG,-,0.00) -92(CGGCTTTG,-,0.00) 15(GGCCACGGCCGC,-,0.00) 561_WT_peak_5738 chr5 52021342 52021529 + 74 NA Intergenic Intergenic -62339 NM_015946 53918 Hs.644352 NM_015946 PELO PRO1770 pelota homolog (Drosophila) protein-coding 0.016043 0.446809 -146(GCTTGCTGTTTC,-,0.00),-118(GCTTCCTGTTGT,-,0.00),-66(GTGTCCTGTTTC,-,0.00) 561_WT_peak_161 chr1 33266780 33266991 + 74 NA intron (NM_003680, intron 4 of 12) Tigger1|DNA|TcMar-Tigger -16158 NM_001256121 64766 Hs.440880 NM_022753 HPRD:07803 S100PBP S100PBPR S100P binding protein protein-coding 0.014218 0.396226 561_WT_peak_6924 chr8 182439 182633 + 74 NA promoter-TSS (NR_003572) promoter-TSS (NR_003572) -14 NM_001287254 169270 Hs.591388 NM_173539 HPRD:11731 ZNF596 - zinc finger protein 596 protein-coding 0.103093 0.687179 -52(GCGACGCC,+,0.00) -54(CCGCGACG,-,0.00) -37(GCTCCGAAGC,+,0.00) 561_WT_peak_2078 chr13 79967053 79967236 + 74 NA intron (NM_001286632, intron 1 of 20) L1MCc|LINE|L1 13212 NM_001286632 64062 Hs.558528 NM_018605 HPRD:12611 RBM26 ARRS2|C13orf10|PPP1R132|SE70-2|ZC3H17 RNA binding motif protein 26 protein-coding 0.010929 0.407609 561_WT_peak_3217 chr17 44657371 44657500 + 74 NA promoter-TSS (NM_001288813) promoter-TSS (NM_001288813) -347 NM_001288811 51326 Hs.559259 NM_016632 HPRD:17424 ARL17A ARF1P2|ARL17P1 ADP-ribosylation factor-like 17A protein-coding 0.077519 0.538462 -44(CGCGTAGG,+,0.00) -121(GGGCCAAGTT,+,0.00),-55(GGGCGGTGTT,+,0.00) -45(CCGCGTAG,-,0.00) 561_WT_peak_1725 chr12 56520016 56520166 + 74 NA Intergenic Intergenic -1895 NM_015292 23344 Hs.632729 NM_015292 HPRD:14367 ESYT1 FAM62A|MBC2 extended synaptotagmin-like protein 1 protein-coding 0.006667 0.516556 -110(AGACACTT,-,0.00) 561_WT_peak_4475 chr2 219761253 219761533 + 74 NA Intergenic Intergenic 16138 NM_025216 80326 Hs.121540 NM_025216 HPRD:16207 WNT10A OODD|SSPS|STHAG4 wingless-type MMTV integration site family, member 10A protein-coding 0.042857 0.661922 68(TCCTCCGGGCCC,-,0.00) -53(CAGCCCCTGCCC,+,0.00),58(GGGCCTGCGCTC,-,0.00) 87(GCTTCCTGCTGC,-,0.00) 55(GTGGGGCCTGCG,+,0.00) 561_WT_peak_6531 chr6 157801031 157801224 + 74 NA Intergenic CpG -1430 NM_153746 79683 Hs.596214 NM_024630 HPRD:15711 ZDHHC14 NEW1CP zinc finger, DHHC-type containing 14 protein-coding 0.056995 0.618557 -67(CCGAGTCG,-,0.00) 561_WT_peak_6399 chr6 91134782 91135005 + 74 NA Intergenic L2a|LINE|L2 112432 NR_039671 100616109 NR_039671 miRBase:MI0016812 MIR4464 - microRNA 4464 ncRNA 0.008969 0.437500 561_WT_peak_2208 chr14 52313825 52314242 + 74 NA Intergenic Intergenic -12989 NM_053064 54331 Hs.187772 NM_053064 HPRD:16234 GNG2 - guanine nucleotide binding protein (G protein), gamma 2 protein-coding 0.026379 0.535885 -37(GGCGTCGC,-,0.00) -100(CAGGCAGGCTGC,-,0.00) 561_WT_peak_5078 chr3 44379991 44380161 + 74 NA 5' UTR (NM_001282914, exon 1 of 11) 5' UTR (NM_001282914, exon 1 of 11) 132 NM_173826 285343 Hs.55131 NM_173826 HPRD:13184 TCAIM C3orf23|TOAG-1|TOAG1 T cell activation inhibitor, mitochondrial protein-coding 0.082353 0.742690 -161(CCCCCTGCCCGG,+,0.00),-91(CCGGGAGGGCCC,-,0.00) -59(GGGCTCAGAGGG,-,0.00) -135(CCCTGCCGCCGC,-,0.00),-11(CCGGGGCGAGGG,+,0.00) 561_WT_peak_5595 chr4 130014214 130014514 + 74 NA promoter-TSS (NM_173487) promoter-TSS (NM_173487) 398 NM_001300898 132320 Hs.654690 NM_144643 HPRD:08700 SCLT1 CAP-1A|CAP1A sodium channel and clathrin linker 1 protein-coding 0.056667 0.534884 -25(TCGGTTGG,-,0.00) -50(CGGGAAAA,+,0.00) 38(CCGCCACG,-,0.00) 561_WT_peak_2292 chr14 75535799 75536095 + 74 NA promoter-TSS (NM_001042430) promoter-TSS (NM_001042430) -333 NM_024643 79696 Hs.48642 NM_024643 HPRD:16607 ZC2HC1C C14orf140|FAM164C zinc finger, C2HC-type containing 1C protein-coding 0.091216 0.636364 -119(CAAAAACG,+,0.00) 561_WT_peak_3911 chr19 57791211 57791742 + 74 NA promoter-TSS (NM_006635) promoter-TSS (NM_006635) -377 NM_006635 10794 Hs.99971 NM_006635 HPRD:06885 ZNF460 HZF8|ZNF272 zinc finger protein 460 protein-coding 0.062147 0.580827 -113(CGAACGCG,-,0.00) 355(CGTCGGCC,+,0.00) -65(GGCTGGGCCCGG,-,0.00),96(CGCGGGCCCAGC,-,0.00),97(GCGGGCCCAGCC,+,0.00) 244(CGACGCGG,+,0.00) 561_WT_peak_1290 chr11 57434668 57434882 + 74 NA promoter-TSS (NM_015457) promoter-TSS (NM_015457) -699 NM_015457 25921 Hs.27239 NM_015457 HPRD:15720 ZDHHC5 DHHC5|ZNF375 zinc finger, DHHC-type containing 5 protein-coding 0.037383 0.497674 -56(AGCGACCT,-,0.00) -48(CGCCGGAC,+,0.00) 561_WT_peak_2200 chr14 50466086 50466426 + 74 NA intron (NM_001012706, intron 1 of 3) intron (NM_001012706, intron 1 of 3) 7982 NM_001012706 283551 Hs.660867 NM_001012706 HPRD:13397 C14orf182 - chromosome 14 open reading frame 182 protein-coding 0.000000 0.445748 561_WT_peak_8 chr1 1093371 1093559 + 74 NA Intergenic CpG -9019 NR_029639 406984 NR_029639 miRBase:MI0000342 MIR200B MIRN200B microRNA 200b ncRNA 0.079787 0.761905 -135(GGTGGCCGAG,+,0.00) -34(GGGCCCCAGCCC,+,0.00) -87(CGGAAGAAGCGG,+,0.00),10(CCCCTTCTTCCC,-,0.00) -100(TGCGCGGA,-,0.00) -66(GGGCGGCGCT,+,0.00) 561_WT_peak_6921 chr7 158611050 158611349 + 74 NA intron (NM_020728, intron 1 of 21) intron (NM_020728, intron 1 of 21) 11120 NM_020728 57488 Hs.490795 NM_020728 HPRD:13053 ESYT2 CHR2SYT|E-Syt2|FAM62B extended synaptotagmin-like protein 2 protein-coding 0.023411 0.510000 116(TCCCTGCCCG,+,0.00) 561_WT_peak_3541 chr19 70544 70970 + 74 NA intron (NR_033266, intron 1 of 2) CpG 209 NR_033266 375690 Hs.521961 NR_033266 WASH5P - WAS protein family homolog 5 pseudogene pseudo 0.117371 0.765808 129(CCGCCCGCCTCC,+,0.00) 148(CCCTCCGGGTCC,-,0.00) 9(AGACGCCT,-,0.00) 18(CCGGGCGGTCGG,-,0.00),227(CCGCCCTCCCGG,+,0.00) 22(GCGGTCGG,-,0.00),104(TCGGTCAG,-,0.00) -141(AGGGGCGGGA,-,0.00),-52(AGGGCCGGGC,-,0.00),118(TCCCGGGCCT,+,0.00) 196(CCCGCGGC,-,0.00) -135(GGGAAGACGCAG,+,0.00),248(CCGCCGCTTCCG,-,0.00) 149(CCTCCGGGTCCC,-,0.00) -28(GGCGCGGC,-,0.00) -5(CCGGGGCGAGCC,+,0.00) -26(CGCGGCTCCAGG,-,0.00) 100(CTTCTCGG,+,0.00) 170(CCCGCCAGGCCC,+,0.00) 171(CCGCCAGGCCCC,-,0.00) 561_WT_peak_5365 chr3 194992268 194992508 + 74 NA promoter-TSS (NM_152531) promoter-TSS (NM_152531) -493 NM_152531 152002 Hs.478741 NM_152531 HPRD:08757 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding 0.079167 0.663900 -71(CGCGCCGGAGGC,+,0.00) -65(GGAGGCCGAG,+,0.00) 16(GAGCCCCAGCAC,+,0.00) -107(CCCCCGCC,-,0.00),-21(CCCCCGCC,-,0.00) -72(TCGCGCCG,+,0.00),-11(CCGCACGA,-,0.00) -2(CCTGCGAGGC,+,0.00) 561_WT_peak_1978 chr13 31039700 31040017 + 74 NA intron (NM_002128, intron 1 of 4) GC_rich|Low_complexity|Low_complexity 223 NM_002128 3146 Hs.434102 NM_002128 HPRD:01228 HMGB1 HMG1|HMG3|SBP-1 high mobility group box 1 protein-coding 0.116719 0.745283 -110(CAGCGTTCCCGG,+,0.00) -133(AGGGCCGGGG,-,0.00) -10(GCCGCGGG,+,0.00) -23(CCGCCGGCTCCC,-,0.00) -75(TGCGCAGT,-,0.00) 35(CGCTCTCCCCGC,-,0.00) -117(CGCGGGGCAGCG,+,0.00) -113(GGGCAGCGTT,+,0.00) 16(GCTGGGGAGC,+,0.00) 561_WT_peak_86 chr1 19536562 19536764 + 74 NA promoter-TSS (NM_020765) promoter-TSS (NM_020765) 83 NM_020765 23352 Hs.148078 NM_020765 HPRD:10184 UBR4 RBAF600|ZUBR1|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding 0.128713 0.714286 -79(AGCCACCT,-,0.00) -3(TCGCCGCC,+,0.00),7(TCGTCGCC,+,0.00) 8(CGTCGCCA,+,0.00) -75(ACCTCCCAGCCC,+,0.00) 21(CGTCGTAC,+,0.00) -19(CGCTGCCGCCGC,-,0.00) 561_WT_peak_4774 chr21 34696684 34696830 + 74 NA promoter-TSS (NM_000629) promoter-TSS (NM_000629) -457 NM_000629 3454 Hs.529400 NM_000629 HPRD:00126 IFNAR1 AVP|IFN-alpha-REC|IFNAR|IFNBR|IFRC interferon (alpha, beta and omega) receptor 1 protein-coding 0.068493 0.666667 -112(AGCCACTT,-,0.00),-78(AGGCCGCT,+,0.00) 561_WT_peak_7243 chr9 33167540 33167900 + 74 NA promoter-TSS (NM_001497) promoter-TSS (NM_001497) -137 NR_108108 101929639 Hs.545818 NR_108108 B4GALT1-AS1 - B4GALT1 antisense RNA 1 ncRNA 0.105556 0.689751 -148(CCGCCCTCTTCC,+,0.00) -4(GGCGGCGGAG,+,0.00) 125(GGCTTCGA,-,0.00),129(TCGACGCC,+,0.00) -113(TCGGTCGC,-,0.00) 134(GCCGGGCG,+,0.00) -156(GCCGCGCA,+,0.00),-100(GCCGCGCC,+,0.00),-61(GCCGCGCC,+,0.00) -106(CGTTGAGCCGCG,+,0.00) 171(AACTCAGCCC,-,0.00) 51(GGCCGCGGCGGC,-,0.00) -161(GCTTGGCCGC,-,0.00),-124(GCGGCGGAGC,+,0.00) 561_WT_peak_826 chr1 244816020 244816199 + 74 NA promoter-TSS (NM_016076) promoter-TSS (NM_016076) -241 NM_001297746 51029 Hs.498317 NM_016076 HPRD:15153 DESI2 C1orf121|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1 desumoylating isopeptidase 2 protein-coding 0.033520 0.600000 -98(CCCGCGGC,-,0.00) 561_WT_peak_4118 chr2 68694444 68694657 + 74 NA promoter-TSS (NM_173545) promoter-TSS (NM_173545) -141 NM_173545 200558 Hs.720369 NM_173545 HPRD:09848 APLF APFL|C2orf13|PALF|Xip1|ZCCHH1 aprataxin and PNKP like factor protein-coding 0.070423 0.588785 -56(AGGCCCGGCGTC,+,0.00) -153(GGCGCCGA,-,0.00),24(GGCGGCGA,-,0.00) -152(GCGCCGAGAGGG,-,0.00) 561_WT_peak_3935 chr19 58892131 58892374 + 74 NA intron (NR_049780, intron 1 of 2) CpG 137 NR_049780 116412 Hs.222236 NM_138466 ENSG00000152475 ZNF837 - zinc finger protein 837 protein-coding 0.139918 0.762295 68(CCGTCCTCCCGC,+,0.00) -121(TGCGCGGC,-,0.00),-8(TCCGCGCA,+,0.00) -100(CCCGGACCCCGC,-,0.00) -14(TGCGGGTCCGCG,-,0.00),61(CGCGGAGCCGTC,+,0.00) -33(CCGCCTCG,-,0.00) -31(GCCTCGCAGG,-,0.00) 561_WT_peak_251 chr1 55181437 55181567 + 74 NA promoter-TSS (NM_004623) promoter-TSS (NM_004623) 7 NM_001291333 7268 Hs.412482 NM_004623 HPRD:08417 TTC4 - tetratricopeptide repeat domain 4 protein-coding 0.138462 0.770992 -164(CGCCCGGC,-,0.00) -78(CGGAAGGAGCCG,+,0.00) -152(CCCCCAGGCCGG,-,0.00) 561_WT_peak_1930 chr12 133338933 133339116 + 74 NA promoter-TSS (NM_015114) promoter-TSS (NM_015114) -550 NM_015114 23141 Hs.654628 NM_015114 ENSG00000176915 ANKLE2 KIAA0692|LEMD7|Lem4 ankyrin repeat and LEM domain containing 2 protein-coding 0.114754 0.668478 -38(CGGCCCGGGAGC,+,0.00) -101(GCCGGGCG,+,0.00) -14(CGGGCAAA,+,0.00) -97(GGCGCGGC,-,0.00) -57(CGAGGCGG,+,0.00) 561_WT_peak_140 chr1 28495912 28496128 + 74 NA intron (NM_001164722, intron 1 of 1) MIR|SINE|MIR 7435 NM_000952 5724 Hs.77542 NM_000952 HPRD:01422 PTAFR PAFR platelet-activating factor receptor protein-coding 0.013889 0.460829 -139(GCCTTCGGGCCT,-,0.00) 561_WT_peak_5459 chr4 44680408 44680785 + 74 NA 5' UTR (NM_021927, exon 1 of 17) 5' UTR (NM_021927, exon 1 of 17) 163 NM_021927 60558 Hs.546419 NM_021927 HPRD:07821 GUF1 EF-4 GUF1 GTPase homolog (S. cerevisiae) protein-coding 0.103448 0.671958 52(CTCCGCCGCC,-,0.00) 88(GGGCTGGGGGTG,-,0.00) 100(CGCACGCG,-,0.00) 81(TGGGTCGG,-,0.00) 114(CGCCACGA,-,0.00) 129(GGGCCGCGCT,+,0.00) -123(GCTGCGCCGC,+,0.00),-123(GCTGCGCCGC,-,0.00),-120(GCGCCGCCGC,-,0.00) 561_WT_peak_4510 chr2 235372726 235372924 + 74 NA Intergenic Intergenic 32868 NM_005737 10123 Hs.111554 NM_005737 HPRD:11988 ARL4C ARL7|LAK ADP-ribosylation factor-like 4C protein-coding 0.045455 0.522613 -119(CGGCACGG,-,0.00) 561_WT_peak_2274 chr14 71787527 71787754 + 74 NA Intergenic CpG -77414 NR_001276 319139 NR_001276 ENSG00000207444 SNORD56B RNU56B small nucleolar RNA, C/D box 56B snoRNA 0.114537 0.767544 -77(TTCCCCTCCTCC,+,0.00) -30(TATTCCGGGTCC,-,0.00) -60(CTCGGCCCCC,-,0.00) -67(CCGGGAGCTCGG,-,0.00) 53(TCGGCGCC,+,0.00) -55(CCCCCGCC,-,0.00),-44(CCCCCGCC,-,0.00),18(CCCCCGCC,-,0.00) -142(CGGCGCGA,-,0.00) -51(CGCCGGCCCCCC,-,0.00) -158(CGCTGAGCCTCG,+,0.00),40(CTCCGCTCCGCG,-,0.00) -62(AGCTCGGCCC,-,0.00) 561_WT_peak_2463 chr15 45018957 45019137 + 74 NA Intergenic Intergenic -2139 NR_125376 100419583 Hs.489254 NR_125376 LOC100419583 - ring finger protein 4 pseudogene pseudo 0.000000 0.441989 561_WT_peak_2369 chr14 102284105 102284344 + 74 NA intron (NM_178586, intron 1 of 12) intron (NM_178586, intron 1 of 12) 8084 NM_178587 5527 Hs.368264 NM_002719 HPRD:03385 PPP2R5C B56G|PR61G protein phosphatase 2, regulatory subunit B', gamma protein-coding 0.020921 0.416667 561_WT_peak_2252 chr14 64108273 64108520 + 74 NA 5' UTR (NM_001258272, exon 1 of 3) 5' UTR (NM_001258272, exon 1 of 3) 245 NM_001008726 112840 Hs.655666 NM_080666 WDR89 C14orf150 WD repeat domain 89 protein-coding 0.080972 0.645161 -35(CCGCGCTCCCGC,+,0.00) 17(GGCGTCGC,-,0.00) -96(CTCCGACG,-,0.00) 64(GCCTGGCCCAGC,-,0.00) 18(GCGTCGCCGC,-,0.00) 561_WT_peak_65 chr1 12494197 12494582 + 74 NA intron (NM_015378, intron 65 of 69) intron (NM_015378, intron 65 of 69) -72911 NR_003025 677885 Hs.658450 NR_003025 SNORA59A ACA59 small nucleolar RNA, H/ACA box 59A snoRNA 0.010390 0.443005 561_WT_peak_6865 chr7 139024835 139025105 + 74 NA promoter-TSS (NM_001244584) promoter-TSS (NM_001244584) -135 NM_001244585 51631 Hs.731488 NM_016019 HPRD:17456 LUC7L2 CGI-74|LUC7B2 LUC7-like 2 (S. cerevisiae) protein-coding 0.088889 0.605166 -121(CTCGGCCTCC,-,0.00) -144(CCGACCTA,+,0.00) -79(CGCCCGGC,-,0.00) 43(CGGCTGCTTCCG,-,0.00) 26(CAACACCG,+,0.00) 52(CCGGTAAA,+,0.00) -125(CCGCCTCG,-,0.00) 561_WT_peak_5253 chr3 130060305 130060476 + 74 NA Intergenic Intergenic -3969 NM_001278298 256076 Hs.205403 NM_153264 HPRD:08196 COL6A5 COL29A1|VWA4 collagen, type VI, alpha 5 protein-coding 0.000000 0.372093 -42(GGGTTTTG,-,0.00) 561_WT_peak_2104 chr13 113527464 113527651 + 74 NA intron (NM_032189, intron 26 of 28) intron (NM_032189, intron 26 of 28) 95395 NR_034002 100289410 Hs.667436 NR_034002 MCF2L-AS1 - MCF2L antisense RNA 1 ncRNA 0.010695 0.531915 561_WT_peak_3435 chr18 11851405 11851756 + 74 NA exon (NM_020412, exon 1 of 1) exon (NM_020412, exon 1 of 1) 191 NM_020412 57132 Hs.656244 NM_020412 HPRD:12106 CHMP1B C10orf2|C18-ORF2|C18orf2|CHMP1.5|Vps46-2|Vps46B|hVps46-2 charged multivesicular body protein 1B protein-coding 0.074074 0.551136 -143(GGCGGCCGGG,+,0.00) -82(CCGACCCA,+,0.00),-68(CCGTCCGA,+,0.00) -67(CGTCCGAC,+,0.00),-66(GTCCGACT,-,0.00) -109(CCTTCGGCGCGC,-,0.00) -99(GCTTCTCAGC,-,0.00) -93(CAGCCGGGCCGC,-,0.00) 561_WT_peak_218 chr1 45769604 45769946 + 73 NA non-coding (NR_024270, exon 1 of 1) non-coding (NR_024270, exon 1 of 1) 193 NR_024270 400752 Hs.334348 NR_024270 LINC01144 - long intergenic non-protein coding RNA 1144 ncRNA 0.096491 0.676385 -44(TGGCGGCT,+,0.00),-24(AGAGGCCT,-,0.00),48(ATCCGCTT,-,0.00) -69(GCCCGGGCCT,+,0.00) 12(CCCGCGGC,-,0.00) -136(GCCGCGCC,+,0.00) 13(CCGCGGCCCCGC,-,0.00) 14(CGCGGCCCCGCG,+,0.00),14(CGCGGCCCCGCG,-,0.00) -154(GGAGCGGCCC,-,0.00) 10(GCCCCGCGGC,-,0.00) 561_WT_peak_4252 chr2 111604576 111604818 + 73 NA intron (NM_001142807, intron 10 of 17) intron (NM_001142807, intron 10 of 17) 114547 NM_001142807 55289 Hs.253320 NM_018308 HPRD:12418 ACOXL - acyl-CoA oxidase-like protein-coding 0.004132 0.477366 561_WT_peak_4492 chr2 232410292 232410529 + 73 NA Intergenic Intergenic -15228 NM_006056 10316 Hs.471619 NM_006056 HPRD:16039 NMUR1 (FM-3)|FM-3|FM3|GPC-R|GPR66|NMU1R neuromedin U receptor 1 protein-coding 0.016878 0.533613 8(GGGCAGAGTT,+,0.00) 561_WT_peak_4077 chr2 55529567 55529742 + 73 NA intron (NM_018084, intron 25 of 31) intron (NM_018084, intron 25 of 31) 20199 NR_027258 344405 Hs.445292 NM_001080459 ENSG00000162997 PRORSD1P NCRNA00117|PRDXDD1P|Prdxdd1|Ybakd1 prolyl-tRNA synthetase associated domain containing 1, pseudogene pseudo 0.000000 0.329545 -25(AGACACTT,-,0.00) 561_WT_peak_1053 chr10 75541741 75541979 + 73 NA promoter-TSS (NM_203298) promoter-TSS (NM_203298) 52 NM_203298 118487 Hs.181174 NM_203298 HPRD:12313 CHCHD1 C10orf34|C2360|MRP-S37 coiled-coil-helix-coiled-coil-helix domain containing 1 protein-coding 0.121849 0.673640 42(GGAGAAGGGCGG,-,0.00) -38(CGGTTTGG,-,0.00) -42(GGCGCGGT,-,0.00) 27(CGGGGAGCGGCG,+,0.00) 21(CCGCGTCG,-,0.00) 561_WT_peak_6554 chr6 170102219 170102930 + 73 NA promoter-TSS (NM_001202550) promoter-TSS (NM_001202550) 317 NM_001029863 387263 Hs.591375 NM_001029863 ENSG00000185127 C6orf120 bA160E12.4 chromosome 6 open reading frame 120 protein-coding 0.098453 0.714888 469(CGGCCCGGACGC,+,0.00) 162(AGCCGCCA,-,0.00) -1(CCTCCTCCCCGG,+,0.00),186(GCGGGAGGGCCG,-,0.00) 438(TCGACGAC,+,0.00),521(GGCGTCTA,-,0.00) 76(CGCGTGCG,+,0.00),259(CGCGGACG,+,0.00) -86(GTCCGAGG,-,0.00) 194(GCCGCGCC,+,0.00),257(TGCGCGGA,-,0.00),378(TGCGCAGC,-,0.00),491(CCCGCGCA,+,0.00) 88(GCGGGGACAGGC,+,0.00) 68(CGTGGACCCGCG,+,0.00) -116(AGCGCGGCCC,-,0.00),-73(ACAGCGGCCC,-,0.00),192(GGGCCGCGCC,+,0.00) 167(CCAGCCATGGCC,+,0.00),169(AGCCATGGCCGC,-,0.00) 230(GCCTCGCAGG,-,0.00) 561_WT_peak_7322 chr9 86571602 86571802 + 73 NA promoter-TSS (NM_032307) promoter-TSS (NM_032307) -39 NM_032307 84267 Hs.208914 NM_032307 HPRD:12969 C9orf64 - chromosome 9 open reading frame 64 protein-coding 0.080000 0.646766 -61(GCTTCCGGTTCC,-,0.00) -110(CCGGGAAAGCGG,-,0.00) -27(GTCCGGCG,-,0.00) -61(GCTTCCGGTTCC,-,0.00) -71(CTCAGGCTCCGC,-,0.00) -105(AAAGCGGTCC,-,0.00) 561_WT_peak_699 chr1 205601177 205601387 + 73 NA 5' UTR (NM_001973, exon 1 of 5) 5' UTR (NM_001973, exon 1 of 5) 718 NM_001973 2005 Hs.497520 NM_001973 HPRD:02592 ELK4 SAP1 ELK4, ETS-domain protein (SRF accessory protein 1) protein-coding 0.114286 0.696682 -100(CTCGGGCGCC,-,0.00) -63(CGCGTTCG,+,0.00) 8(TGGGCCGGGA,-,0.00) -114(GCCGGGGG,+,0.00) 18(CCTCGGAC,+,0.00) -133(CAAACCCG,+,0.00),-127(CGGGTTTG,-,0.00) 2(GCCGCCTGGGCC,+,0.00) -15(CCGCCAGGACCC,-,0.00) 561_WT_peak_5278 chr3 141261596 141261812 + 73 NA intron (NM_006506, intron 5 of 23) L1MD2|LINE|L1 55778 NM_006506 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding 0.000000 0.331797 561_WT_peak_5388 chr4 1261728 1261943 + 73 NA Intergenic LTR13|LTR|ERVK 18607 NR_033339 92070 Hs.561314 NM_052861 CTBP1-AS2 C4orf42|CTBP1-AS1 CTBP1 antisense RNA 2 (head to head) ncRNA 0.018605 0.560185 561_WT_peak_47 chr1 9006592 9006856 + 73 NA intron (NM_001270502, intron 1 of 5) intron (NM_001270502, intron 1 of 5) 831 NM_001270502 765 Hs.100322 NM_001215 HPRD:00264 CA6 CA-VI|GUSTIN carbonic anhydrase VI protein-coding 0.015152 0.426415 -28(CGGAAGGTGCTG,+,0.00) 29(TTTACCCA,-,0.00) 561_WT_peak_3065 chr17 18761495 18761830 + 73 NA intron (NM_001243941, intron 1 of 9) CpG 281 NM_001243941 5636 Hs.632236 NM_002767 HPRD:04789 PRPSAP2 PAP41 phosphoribosyl pyrophosphate synthetase-associated protein 2 protein-coding 0.104478 0.758929 -109(GGGCCGGGGCTG,-,0.00) 0(CCCGCGGC,-,0.00),76(CCCGCGGC,-,0.00),126(GGCGGGGG,+,0.00),132(GGCGGGGG,+,0.00) -112(GCGGGGCCGGGG,+,0.00),-44(GGCTGGCTCCGG,-,0.00),3(GCGGCGCCGGCA,+,0.00),127(GCGGGGGCGGGG,+,0.00) -115(GCGGCGGGGC,+,0.00) -51(GAGGGCTGGCTG,+,0.00) 561_WT_peak_4932 chr22 41214668 41214940 + 73 NA intron (NR_104235, intron 1 of 10) intron (NR_104235, intron 1 of 10) 599 NR_104236 10478 Hs.474938 NM_006358 HPRD:08425 SLC25A17 PMP34 solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17 protein-coding 0.040441 0.516484 30(TCCTCCGGGCCA,-,0.00) -40(CCCGCGGC,-,0.00) 561_WT_peak_7436 chr9 130790848 130791053 + 73 NA Intergenic HAL1|LINE|L1 38649 NM_197956 203245 Hs.373606 NM_197956 HPRD:12987 NAIF1 C9orf90|bA379C10.2 nuclear apoptosis inducing factor 1 protein-coding 0.014634 0.402913 -18(AACCACTT,-,0.00) 561_WT_peak_6031 chr5 175875213 175875693 + 73 NA promoter-TSS (NM_014613) promoter-TSS (NM_014613) 97 NM_014613 23197 Hs.484242 NM_014613 HPRD:16870 FAF2 ETEA|UBXD8|UBXN3B Fas associated factor family member 2 protein-coding 0.079167 0.673597 255(AAGCCTCT,+,0.00) -114(GGCGGGGG,+,0.00),-107(GGCGGGGG,+,0.00),243(CCCCCGGC,-,0.00) 188(CCTTCTCAGACC,+,0.00) 35(GCGGCGCCTGAG,+,0.00) 301(CCGCCTCG,-,0.00) 561_WT_peak_6278 chr6 31620259 31620444 + 73 NA promoter-TSS (NM_001098534).5 promoter-TSS (NM_001098534).5 126 NM_001199697 7917 Hs.440900 NM_004639 HPRD:00808 BAG6 BAG-6|BAT3|D6S52E|G3 BCL2-associated athanogene 6 protein-coding 0.102703 0.688172 -29(AGCCGCCA,-,0.00) -126(GGGCACGA,-,0.00),-75(TCGGGCCG,+,0.00) -70(CCGGGGCCGGCC,+,0.00) -34(CGAGGAGCCGCC,+,0.00) -79(CGAGTCGG,+,0.00) 561_WT_peak_2140 chr14 23790776 23791029 + 73 NA exon (NM_004643, exon 1 of 7) exon (NM_004643, exon 1 of 7) 1505 NM_004643 8106 Hs.707712 NM_004643 PABPN1 OPMD|PAB2|PABII|PABP-2|PABP2 poly(A) binding protein, nuclear 1 protein-coding 0.090909 0.771654 29(GGAGGAGGAGGA,-,0.00) -70(CGAGCCGGAGCC,+,0.00) -158(CCGGGGAGGGGG,-,0.00),-29(GCGCCCCCCCGG,+,0.00) -63(GAGCCCGAGCCC,+,0.00) 13(CCCCCGGC,-,0.00) -39(CCCCGGCCCCGC,-,0.00) -38(CCCGGCCCCGCG,-,0.00) -43(GCCGCCCCGGCC,+,0.00) 561_WT_peak_2763 chr16 29611639 29611850 + 73 NA Intergenic (CAGCC)n|Simple_repeat|Simple_repeat 13294 NR_002593 81893 Hs.677169 NM_031211 HPRD:13964 SLC7A5P1 DC49|LAT1-3TM|MLAS|hLAT1-3TM solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1 pseudo 0.037915 0.693396 561_WT_peak_4225 chr2 97778648 97779530 + 73 NA promoter-TSS (NM_001164315) promoter-TSS (NM_001164315) -144 NM_001164315 375248 Hs.541894 NM_198555 HPRD:16492 ANKRD36 UNQ2430 ankyrin repeat domain 36 protein-coding 0.096372 0.710079 -156(AGCCGCCA,-,0.00) 145(CCGTCCTCCCGC,+,0.00),379(CCGCCCTCCCGC,+,0.00) 603(GGCGGCGA,-,0.00) 64(CCCCGCCAGCCC,+,0.00) 376(GCCCCGCCCT,+,0.00) -12(GCCGGGGG,+,0.00),73(CCCCCGCC,-,0.00),386(CCCGCGGC,-,0.00) -39(CGGCAGGA,-,0.00) -76(CCGGGGCCAGCC,+,0.00),209(GTGGGCCCAGCG,+,0.00) 375(AGCCCCGCCC,-,0.00) 153(CCGCCTCG,-,0.00) 155(GCCTCGCACC,-,0.00),395(CCTCCGCAGC,-,0.00),527(GCTGAGAGGC,+,0.00) -74(GGGGCCAGCCTG,+,0.00),-69(CAGCCTGGCCGC,-,0.00),66(CCGCCAGCCCCC,-,0.00) 561_WT_peak_5894 chr5 130599455 130599626 + 73 NA promoter-TSS (NM_001038702) promoter-TSS (NM_001038702) -162 NM_001038702 56990 Hs.508829 NM_020240 HPRD:16695 CDC42SE2 SPEC2 CDC42 small effector 2 protein-coding 0.128655 0.703488 -49(CCGGCCGA,+,0.00) -21(GGCGGGGG,+,0.00),-5(GGCGGGGG,+,0.00) -79(CGGCTCGA,-,0.00) -20(GCGGGGGCGGGG,+,0.00),-14(GCGGGGCCTGGC,+,0.00) -11(GGGCCTGGCGGG,-,0.00) -12(GGGGCCTGGCGG,+,0.00) 561_WT_peak_6225-2 chr6 27807109 27807254 + 73 NA TTS (NM_003520) TTS (NM_003520) 741 NM_003520 8341 Hs.534368 NM_003520 HPRD:11899 HIST1H2BN H2B/d|H2BFD histone cluster 1, H2bn protein-coding 0.062069 0.609589 561_WT_peak_2957 chr16 89753163 89753381 + 73 NA intron (NR_027703, intron 1 of 11) CpG 196 NR_027702 8558 Hs.699177 NM_003674 ENSG00000185324 CDK10 PISSLRE cyclin-dependent kinase 10 protein-coding 0.123853 0.744292 25(GAAGCCGGGGCG,-,0.00) 10(CCCGCGGC,-,0.00),15(GGCGGGGG,+,0.00) -50(TCGTGTCG,+,0.00),-22(CGGCACGG,-,0.00) -88(CCTCGCTA,+,0.00) -120(TGCGCGGG,-,0.00),-38(GCCGCGCC,+,0.00) 34(GCGGGGCGGGCT,+,0.00) -44(CGCGCTGCCGCG,+,0.00) -91(CCGCCTCG,-,0.00) 561_WT_peak_4217 chr2 97009904 97010241 + 73 NA intron (NM_001281710, intron 6 of 17) intron (NM_001281710, intron 6 of 17) 8593 NM_015341 23397 Hs.308045 NM_015341 HPRD:03820 NCAPH BRRN1|CAP-H non-SMC condensin I complex, subunit H protein-coding 0.008902 0.393491 -87(TGCGCAGT,-,0.00) -27(GCTGCCTTGCTG,+,0.00) 561_WT_peak_4151 chr2 74684814 74685013 + 73 NA promoter-TSS (NM_012477) promoter-TSS (NM_012477) -614 NM_012477 23559 Hs.516114 NM_012477 HPRD:09510 WBP1 WBP-1 WW domain binding protein 1 protein-coding 0.085427 0.690000 -37(ATGCGGCT,+,0.00) -106(CGCCGCTA,+,0.00) -156(CCCCCTCAGGCC,+,0.00) 19(TTAACCCG,-,0.00) 561_WT_peak_7106 chr8 104473843 104474054 + 73 NA Intergenic Intergenic -39028 NM_001100117 9699 Hs.655271 NM_014677 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding 0.004739 0.405660 561_WT_peak_7464 chr9 134151792 134152009 + 73 NA promoter-TSS (NM_033387) promoter-TSS (NM_033387) 6 NM_033387 286336 Hs.143878 NM_033387 HPRD:12968 FAM78A C9orf59 family with sequence similarity 78, member A protein-coding 0.092166 0.600917 44(CGCACGCG,-,0.00) 25(TTCCTGCCCT,+,0.00) -64(CGGAGGAAGCAG,+,0.00) -135(CGGTTCTG,-,0.00) -5(GCCGCGCC,+,0.00) -20(CTCTGTCCCCGC,-,0.00) -11(CGCGCGGCCGCG,+,0.00) 561_WT_peak_998 chr10 53459778 53460057 + 73 NA promoter-TSS (NM_015235) promoter-TSS (NM_015235) -562 NM_015235 23283 Hs.591358 NM_015235 HPRD:09900 CSTF2T CstF-64T cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant protein-coding 0.028674 0.421429 -28(CGTTTTTG,-,0.00) 561_WT_peak_7146 chr8 126620210 126620435 + 73 NA Intergenic Intergenic 175871 NM_001282985 10221 Hs.444947 NM_025195 HPRD:09863 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding 0.017778 0.477876 18(GGCGGGGG,+,0.00) 19(GCGGGGGCAGCC,+,0.00) 561_WT_peak_5703 chr5 40407074 40407237 + 73 NA Intergenic Intergenic -272877 NM_000958 5734 Hs.199248 NM_000958 HPRD:03350 PTGER4 EP4|EP4R prostaglandin E receptor 4 (subtype EP4) protein-coding 0.012270 0.481707 561_WT_peak_1061 chr10 76345115 76345327 + 73 NA intron (NM_001123, intron 7 of 10) intron (NM_001123, intron 7 of 10) -56139 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA 0.004717 0.342723 561_WT_peak_1708 chr12 53718856 53719165 + 73 NA Intergenic CpG -3598 NM_015665 8086 Hs.369144 NM_015665 HPRD:05646 AAAS AAA|AAASb|ADRACALA|ADRACALIN|ALADIN achalasia, adrenocortical insufficiency, alacrimia protein-coding 0.103560 0.716129 -58(AAGCGGTT,+,0.00) -99(GCCCGGCCCT,+,0.00) -100(CGCCCGGC,-,0.00),117(CGCCCGGC,-,0.00) -70(CGCCGCTA,+,0.00) -55(CGGTTTTT,-,0.00),-31(CAAAACCC,+,0.00) 1(AGGGGCCGAAGG,+,0.00) -74(GCGCCGCCGC,-,0.00) 561_WT_peak_332 chr1 95699691 95700101 + 73 NA intron (NM_001199682, intron 1 of 3) CpG 185 NM_001278247 25950 Hs.483512 NM_015485 HPRD:11527 RWDD3 RSUME RWD domain containing 3 protein-coding 0.095122 0.717762 159(CCCGGAGGCCGG,-,0.00) 63(CGCGTTCG,+,0.00) -153(GCCGCGGG,+,0.00) -110(GGCAGCGGAAGG,+,0.00) 225(GGCGCGGC,-,0.00) 225(GGCGCGGCCC,-,0.00) -74(ACAGCCATGGCG,+,0.00),-72(AGCCATGGCGGA,-,0.00) 561_WT_peak_603 chr1 167190204 167190358 + 73 NA intron (NM_001198786, intron 1 of 14) CpG 158 NR_037163 5451 Hs.283402 NM_002697 HPRD:01250 POU2F1 OCT1|OTF1|oct-1B POU class 2 homeobox 1 protein-coding 0.071429 0.548387 -30(CCCCCGCC,-,0.00),-25(GCCGGGCG,+,0.00) -121(CGCTGCCCCCCC,-,0.00),-51(GGGGGGCCGGGG,+,0.00) 561_WT_peak_769 chr1 228645995 228646307 + 73 NA promoter-TSS (NM_033445) promoter-TSS (NM_033445) 343 NM_175055 128312 Hs.376691 NM_175055 HPRD:13661 HIST3H2BB H2Bb histone cluster 3, H2bb protein-coding 0.080128 0.597444 7(GTCCGAGG,-,0.00) -53(CCGCGAAG,-,0.00) -104(CAGCGAGGCCTC,-,0.00) 561_WT_peak_5809 chr5 72861050 72861225 + 73 NA promoter-TSS (NM_001284431) promoter-TSS (NM_001284431) 374 NM_023039 57763 Hs.239154 NM_023039 HPRD:12044 ANKRA2 ANKRA ankyrin repeat, family A (RFXANK-like), 2 protein-coding 0.091429 0.664773 -32(CGAGTCGG,+,0.00) 561_WT_peak_4935 chr22 41487226 41487423 + 73 NA Intergenic CpG -1193 NR_031694 100302237 NR_031694 miRBase:MI0006428 MIR1281 MIRN1281|hsa-mir-1281 microRNA 1281 ncRNA 0.081218 0.666667 -9(CCGTCGTCCCGG,+,0.00) -6(TCGTCCCG,+,0.00) -122(GGGTTTTG,-,0.00) 561_WT_peak_7341 chr9 93925050 93925713 + 73 NA Intergenic Intergenic -87967 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA 0.024133 0.537651 -38(AGCCACTT,-,0.00) 321(TCATGCCG,+,0.00) 383(CAAAACCC,+,0.00) 455(TGGGTAAA,+,0.00) -12(CCCCCGCAGC,-,0.00) 561_WT_peak_6405 chr6 96025568 96025794 + 73 NA promoter-TSS (NR_047502) promoter-TSS (NR_047502) 308 NM_024641 79694 Hs.734632 NM_024641 HPRD:14357 MANEA ENDO|hEndo mannosidase, endo-alpha protein-coding 0.084071 0.651982 -131(CTCGCCCGCC,-,0.00) -69(TGGCAGGCGCTG,-,0.00) -162(AGGCACGA,-,0.00) -86(TTGACCCG,-,0.00) -137(TGCGCGCT,-,0.00) -110(TGGCCGCTTT,+,0.00) 561_WT_peak_4443 chr2 202316237 202316438 + 73 NA promoter-TSS (NM_001206864) promoter-TSS (NM_001206864) -18 NM_015049 66008 Hs.152774 NM_015049 HPRD:09547 TRAK2 ALS2CR3|CALS-C|GRIF-1|GRIF1|MILT2|OIP98 trafficking protein, kinesin binding 2 protein-coding 0.084577 0.698020 -144(GACACCGGGTCA,-,0.00) -84(AGCGGCCT,-,0.00) -7(CCGCCTTCTCGC,+,0.00),15(CGGGGAGGGAGG,-,0.00) -156(CGGTTCTG,-,0.00) -139(CGGGTCAA,+,0.00) -110(GGAAGCCAAAGG,+,0.00) -35(TGCCCGCCCCGC,-,0.00),-15(CGAAGGCCCCGC,-,0.00) 25(GGCGGGGCCGCG,+,0.00) 561_WT_peak_5375 chr3 197281548 197281786 + 73 NA intron (NM_203314, intron 1 of 7) CpG 1191 NM_203314 622 Hs.274539 NM_004051 HPRD:04344 BDH1 BDH|SDR9C1 3-hydroxybutyrate dehydrogenase, type 1 protein-coding 0.113445 0.635983 -48(GGCGGCCGCG,+,0.00) -98(TCGACGCC,+,0.00) 0(CCGACCGG,+,0.00) -100(GTTCGACG,-,0.00) -26(GCCCAAGGCGCC,-,0.00) -136(GCTGACTGGCTG,+,0.00) 561_WT_peak_4944 chr22 42085014 42085279 + 73 NA promoter-TSS (NM_005008) promoter-TSS (NM_005008) -233 NM_001003796 4809 Hs.182255 NM_005008 HPRD:03197 NHP2L1 15.5K|FA-1|FA1|NHPX|OTK27|SNRNP15-5|SNU13|SPAG12|SSFA1 NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) protein-coding 0.052830 0.530075 -53(GGAGGCCGAG,+,0.00) -84(AGCGGCTT,-,0.00) -66(TCCCGGCACT,+,0.00) 16(CGTCCCTA,+,0.00) -47(CGAGGCGG,+,0.00) 561_WT_peak_5076 chr3 43732126 43732300 + 73 NA promoter-TSS (NM_016006) promoter-TSS (NM_016006) -162 NM_016006 51099 Hs.19385 NM_016006 ABHD5 CDS|CGI58|IECN2|NCIE2 abhydrolase domain containing 5 protein-coding 0.068966 0.582857 -28(TCGGGCGG,-,0.00) -30(CGTCGGGC,+,0.00) -155(CAACACCG,+,0.00) 561_WT_peak_1545 chr12 1058856 1059144 + 73 NA promoter-TSS (NM_001297421) promoter-TSS (NM_001297421) -112 NM_001297422 5893 Hs.410355 NM_134422 HPRD:11855 RAD52 - RAD52 homolog (S. cerevisiae) protein-coding 0.090278 0.633218 84(TCGGTCCG,-,0.00) 96(CGTCGGAT,+,0.00) -2(GGCGCGGT,-,0.00) 27(CGCTCGCCCTGC,-,0.00) 561_WT_peak_5035 chr3 20096346 20096527 + 73 NA intron (NM_003884, intron 1 of 17) intron (NM_003884, intron 1 of 17) 14912 NM_003884 8850 Hs.533055 NM_003884 HPRD:06780 KAT2B CAF|P/CAF|PCAF K(lysine) acetyltransferase 2B protein-coding 0.011050 0.434066 -104(GCAAAAGGAAGC,+,0.00) 561_WT_peak_1864 chr12 112819853 112820124 + 73 NA promoter-TSS (NM_001109662) promoter-TSS (NM_001109662) -92 NM_001109662 283450 Hs.530943 NM_173813 HPRD:08170 HECTD4 C12orf51|POTAGE HECT domain containing E3 ubiquitin protein ligase 4 protein-coding 0.147601 0.768382 -105(CGCGGCCGCC,-,0.00) -50(CGCCCGGC,-,0.00),-44(GCCGGGGG,+,0.00) 9(GCCGCGCC,+,0.00) -123(CGCCGCCGCCGC,-,0.00),-120(CGCCGCCGCCGC,-,0.00),-117(CGCCGCCGCCGC,-,0.00),-114(CGCCGCCGCCGC,-,0.00) 52(AACTCCGCCC,-,0.00) 61(CTAGGCGG,+,0.00),70(CCGAGTCG,-,0.00) -110(GCCGCCGCGGCC,+,0.00),-90(GCCCATGGCCCC,-,0.00),-7(GTCCATGGCAGC,-,0.00) -63(GCTGAGGAGC,+,0.00) 561_WT_peak_4603 chr20 32320150 32320358 + 73 NA intron (NR_104259, intron 1 of 13) CpG 688 NM_001282935 84905 Hs.516989 NM_032819 HPRD:15781 ZNF341 - zinc finger protein 341 protein-coding 0.120192 0.712919 -47(CTCGGCGGCC,-,0.00) -110(AGGCGGCT,+,0.00) -86(CCGGGACGGGGG,-,0.00),-61(GCGGGCAGGAGG,-,0.00) -152(GGGAGGCGACGG,+,0.00) -157(TGCGCGGG,-,0.00) -122(CCGCGGCCAGGG,+,0.00),-94(CGCGGGGCCCGG,-,0.00),-93(GCGGGGCCCGGG,+,0.00) -104(CTTGGCGG,+,0.00) -118(GGCCAGGGAGGC,-,0.00),-107(CGGCTTGGCGGC,-,0.00),-50(GGCCTCGGCGGC,-,0.00) -22(TCTGCGGAGC,+,0.00) -108(GCGGCTTGGCGG,+,0.00) 561_WT_peak_5225 chr3 120067714 120067951 + 73 NA exon (NM_001099678, exon 1 of 4) exon (NM_001099678, exon 1 of 4) 354 NM_001099678 116064 Hs.518084 NM_001099678 ENSG00000163428 LRRC58 - leucine rich repeat containing 58 protein-coding 0.113924 0.726891 -95(AGCCGGTT,-,0.00),13(AAGCCGCT,+,0.00) -42(CGGCCCGA,-,0.00) 49(CGGTTGTG,-,0.00) -63(GCCGCGCA,+,0.00) -109(CACTGGGCCCGC,-,0.00),-68(CGCAGGCCGCGC,-,0.00) 561_WT_peak_6225 chr6 27806725 27806909 + 73 NA promoter-TSS (NM_003510) promoter-TSS (NM_003510) 377 NM_003520 8341 Hs.534368 NM_003520 HPRD:11899 HIST1H2BN H2B/d|H2BFD histone cluster 1, H2bn protein-coding 0.070652 0.643243 -48(TCGGTCAG,-,0.00) 561_WT_peak_6867 chr7 139044140 139044411 + 73 NA promoter-TSS (NM_001270643) promoter-TSS (NM_001270643) -317 NM_016019 51631 Hs.731488 NM_016019 HPRD:17456 LUC7L2 CGI-74|LUC7B2 LUC7-like 2 (S. cerevisiae) protein-coding 0.118081 0.676471 86(AGCCGCCA,-,0.00) -146(GGCGGCGA,-,0.00),-91(TCCACGCC,+,0.00) -104(GAACCAGGACGC,+,0.00) -157(GCGGCCCCGGCG,+,0.00) -160(AACGCGGCCC,-,0.00) -155(GGCCCCGGCGGC,-,0.00) 561_WT_peak_2451 chr15 43477591 43477805 + 73 NA TTS (NM_024956) TTS (NM_024956) 232 NR_027513 23582 Hs.36794 NM_012142 CCNDBP1 DIP1|GCIP|HHM cyclin D-type binding-protein 1 protein-coding 0.093458 0.683721 -144(TGGCCCGGAAGT,+,0.00) -69(AAGCGACT,+,0.00) 10(CTTGGCGG,+,0.00) 561_WT_peak_4627 chr20 36155959 36156309 + 72 NA promoter-TSS (NM_001167821) promoter-TSS (NM_001167821) 0 NM_001167821 10904 Hs.472651 NM_006698 HPRD:16552 BLCAP BC10 bladder cancer associated protein protein-coding 0.082857 0.680912 -69(CTGCCTTCCCGG,+,0.00),159(CCGGGGAGACGC,-,0.00) -21(GCGACGCC,+,0.00),57(TTGACGCC,+,0.00),143(CCGACGCC,+,0.00) -143(GGGCTGGGAAGG,-,0.00),33(GCCTCTCATCCC,+,0.00) 15(GGCGCGGC,-,0.00) 80(CCTGCCATGGCG,+,0.00),82(TGCCATGGCGCC,-,0.00) -141(GCTGGGAAGG,+,0.00),89(GCGCCGCCGC,-,0.00) 561_WT_peak_5189 chr3 105471859 105472128 + 72 NA intron (NM_170662, intron 4 of 18) intron (NM_170662, intron 4 of 18) 115894 NM_170662 868 Hs.430589 NM_170662 HPRD:05136 CBLB Cbl-b|RNF56 Cbl proto-oncogene B, E3 ubiquitin protein ligase protein-coding 0.000000 0.396296 90(AAAACAGGAAAC,+,0.00) 561_WT_peak_415 chr1 121200564 121200791 + 72 NA Intergenic Intergenic -60233 NR_003955 647121 Hs.697682 NR_003955 EMBP1 - embigin pseudogene 1 pseudo 0.004405 0.355263 25(GAAATAGGAAAC,+,0.00) 561_WT_peak_60 chr1 11724832 11725059 + 72 NA intron (NM_018438, intron 1 of 5) intron (NM_018438, intron 1 of 5) 795 NM_018438 26270 Hs.464419 NM_018438 HPRD:07291 FBXO6 FBG2|FBS2|FBX6|Fbx6b F-box protein 6 protein-coding 0.057269 0.631579 -143(GACGCCGGGCCG,-,0.00) -138(CGGGCCGGGC,-,0.00),-58(AGGGCCGGGG,-,0.00) -55(GCCGGGGG,+,0.00) -111(GGTGTGAGAGGG,-,0.00) 561_WT_peak_1260 chr11 43380480 43380720 + 72 NA exon (NM_018259, exon 1 of 24) exon (NM_018259, exon 1 of 24) 165 NM_018259 55761 Hs.191186 NM_018259 HPRD:15582 TTC17 - tetratricopeptide repeat domain 17 protein-coding 0.104167 0.721992 -153(GCCGGGGG,+,0.00) -112(CGGTACGA,-,0.00),-45(CGGCACGA,-,0.00) 37(CCTCTTCTCCCG,-,0.00) 1(CGGGAAAA,+,0.00) 55(CCCTCGCCCCGG,-,0.00) -77(GCTCCTCAGC,-,0.00) -161(GCGGCCCGGCCG,+,0.00) 561_WT_peak_7173 chr8 141606914 141607117 + 72 NA intron (NM_012154, intron 1 of 18) intron (NM_012154, intron 1 of 18) 38631 NM_012154 27161 Hs.743313 NM_012154 HPRD:06943 AGO2 EIF2C2|Q10 argonaute RISC catalytic component 2 protein-coding 0.054187 0.681373 -163(CCGGGGTGGGGG,-,0.00) -2(CCCTGGCCCCAG,-,0.00) 561_WT_peak_7114 chr8 116230995 116231373 + 72 NA Intergenic Intergenic 449055 NM_001282902 7227 Hs.657018 NM_014112 HPRD:05091 TRPS1 GC79|LGCR trichorhinophalangeal syndrome I protein-coding 0.005291 0.411609 -70(CAGAACCG,+,0.00) 561_WT_peak_3998 chr2 27309112 27309367 + 72 NA promoter-TSS (NM_006488) promoter-TSS (NM_006488) -372 NM_006488 3795 Hs.567297 NM_000221 HPRD:11774 KHK - ketohexokinase (fructokinase) protein-coding 0.105882 0.664062 -29(AGACACTT,-,0.00) 35(GCCGGGCG,+,0.00) -128(CCCTCCGCTCCC,-,0.00) -64(GCCGCCCA,+,0.00) -71(CGCGGGCGCCGC,-,0.00) -67(GGCGCCGCCC,-,0.00) -80(GCTCCCCCGC,-,0.00) 561_WT_peak_2769 chr16 29816596 29817054 + 72 NA promoter-TSS (NM_001276275) promoter-TSS (NM_001276275) -592 NM_001276275 4150 Hs.23650 NM_002383 HPRD:02999 MAZ PUR1|Pur-1|SAF-1|SAF-2|SAF-3|ZF87|ZNF801|Zif87 MYC-associated zinc finger protein (purine-binding transcription factor) protein-coding 0.122271 0.675381 278(GGCGGAGGGAGG,-,0.00) 92(CGGGGAGGACGG,-,0.00) -160(TCGCCGCC,+,0.00) 160(GGGCGCGCGCTC,-,0.00) 252(CGCGTGCG,+,0.00),254(CGTGCGCG,-,0.00) 197(CCCCCGGC,-,0.00) 280(CGGAGGGAGGGG,+,0.00) -36(GGGCTGCGGGGG,-,0.00) 126(GGAAGCCGAAGC,+,0.00) 179(AGCCCCGCCC,-,0.00) -8(CCGCCTCG,-,0.00) -34(GCTGCGGGGG,+,0.00) 561_WT_peak_95 chr1 21620754 21620929 + 72 NA intron (NR_038404, intron 2 of 2) intron (NR_038404, intron 2 of 2) 1058 NR_038404 100506801 Hs.663049 NR_038404 ENSG00000231105 LOC100506801 - uncharacterized LOC100506801 ncRNA 0.017143 0.534091 561_WT_peak_7446 chr9 131873269 131873573 + 72 NA promoter-TSS (NM_178003) promoter-TSS (NM_178003) -172 NM_178003 5524 Hs.400740 NM_021131 HPRD:02858 PPP2R4 PP2A|PR53|PTPA protein phosphatase 2A activator, regulatory subunit 4 protein-coding 0.052632 0.557377 121(GGCGGCCGTG,+,0.00) 77(TTGACGCC,+,0.00) 118(TCGGGCGG,-,0.00) 109(GCCCGACG,-,0.00) 561_WT_peak_5102 chr3 49044629 49044982 + 72 NA TTS (NM_177939) TTS (NM_177939) 168 NM_018031 11180 Hs.654815 NM_018031 HPRD:06912 WDR6 - WD repeat domain 6 protein-coding 0.099150 0.663842 -143(AGGGGCGGGA,-,0.00) -65(GCCGCGGG,+,0.00),98(GCCGCGGG,+,0.00) -95(CGTGGGAC,+,0.00) -125(CGCGGGCCCCGC,-,0.00),-124(GCGGGCCCCGCC,+,0.00) -59(GGCGCCCTGGTC,+,0.00) -2(GCTGGGAAGG,+,0.00) 561_WT_peak_7303 chr9 75747212 75747261 + 72 NA Intergenic Intergenic -19545 NM_000700 301 Hs.494173 NM_000700 HPRD:01060 ANXA1 ANX1|LPC1 annexin A1 protein-coding 0.020408 0.260000 561_WT_peak_3418 chr18 3451179 3451418 + 72 NA promoter-TSS (NM_173210) promoter-TSS (NM_173210) -105 NM_170695 7050 Hs.373550 NM_003244 HPRD:04023 TGIF1 HPE4|TGIF TGFB-induced factor homeobox 1 protein-coding 0.029289 0.475000 -149(AGCGGCAT,-,0.00) 561_WT_peak_2517 chr15 65823057 65823227 + 72 NA intron (NM_016395, intron 1 of 10) CpG 315 NM_016395 51495 Hs.512973 NM_016395 HPRD:11037 PTPLAD1 B-IND1|BIND1|HACD3|HSPC121 protein tyrosine phosphatase-like A domain containing 1 protein-coding 0.152941 0.719298 -134(GCGGGATCGCGG,-,0.00) -24(GTGCTGGCGCTT,-,0.00) -86(CGCGTGCG,+,0.00),-84(CGTGCGCG,-,0.00),-34(CGCTTACG,+,0.00) -152(TCGGGCGG,-,0.00) -127(CGCGGCTCCGGG,-,0.00) -44(CGACGCGG,+,0.00) -112(CCGCCAGGACCC,-,0.00) 561_WT_peak_1754 chr12 68513278 68513545 + 72 NA Intergenic MIRb|SINE|MIR 40110 NM_000619 3458 Hs.856 NM_000619 HPRD:00957 IFNG IFG|IFI interferon, gamma protein-coding 0.003745 0.350746 561_WT_peak_6085 chr6 4018682 4018882 + 72 NA Intergenic CpG -2787 NM_003913 8899 Hs.159014 NM_003913 HPRD:09087 PRPF4B PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1 pre-mRNA processing factor 4B protein-coding 0.095000 0.696517 -158(CGGCCCGGCTGC,+,0.00),-74(GGCTCCGGGCCC,-,0.00) -164(CTCGGCCGGC,-,0.00) 14(AGGCGGCT,+,0.00) -163(TCGGCCGG,-,0.00),-21(CCGACGGA,+,0.00) -161(GGCCGGCCCGGC,-,0.00),-70(CCGGGCCCAGAG,+,0.00) -112(GCGCCGCCGC,-,0.00),-45(GCTGGGAAGC,+,0.00) -159(CCGGCCCGGCTG,+,0.00) 561_WT_peak_1082 chr10 89102502 89102725 + 72 NA promoter-TSS (NR_024397) promoter-TSS (NR_024397) -298 NR_024397 728190 Hs.647195 NR_024397 ENSG00000223482 NUTM2A-AS1 FAM22A-AS1 NUTM2A antisense RNA 1 ncRNA 0.130045 0.714286 34(GGATCCGGGTCG,-,0.00) -49(CTGGGCCGCC,-,0.00) 51(TCGGCCGG,-,0.00) -83(CGCCCGGC,-,0.00),6(CCCGCGGC,-,0.00) -93(CCGAGTAG,-,0.00),19(CCGCGACG,-,0.00) 561_WT_peak_6900 chr7 150452578 150452848 + 72 NA Intergenic (GA)n|Simple_repeat|Simple_repeat 18277 NM_018384 55340 Hs.647079 NM_018384 HPRD:16280 GIMAP5 HIMAP3|IAN-5|IAN4|IAN4L1|IAN5|IMAP3|IROD GTPase, IMAP family member 5 protein-coding 0.007407 0.494465 32(CAAAGCCG,+,0.00) 33(AAAGCCGCCC,-,0.00) 561_WT_peak_1266 chr11 45869090 45869327 + 72 NA exon (NM_021117, exon 1 of 12) exon (NM_021117, exon 1 of 12) 251 NM_021117 1408 Hs.532491 NM_021117 HPRD:07226 CRY2 HCRY2|PHLL2 cryptochrome circadian clock 2 protein-coding 0.122363 0.705882 -32(GCGGCCTCCTCC,+,0.00) -90(GGCGGCCGTG,+,0.00) -84(CGTGCGCG,-,0.00) -20(TCAGTCGG,-,0.00) -162(CGGCACGG,-,0.00) -82(TGCGCGGG,-,0.00) 35(CAGCCAGGACCC,-,0.00) 561_WT_peak_7587 chrX 78514623 78514810 + 72 NA Intergenic Intergenic 88247 NM_032553 84636 Hs.326713 NM_032553 HPRD:06512 GPR174 GPCR17|LYPSR3 G protein-coupled receptor 174 protein-coding 0.005348 0.436170 -149(GGAGGAGGAGGA,-,0.00),-146(GGAGGAGGATGG,-,0.00) 561_WT_peak_3291 chr17 60802093 60802313 + 72 NA intron (NM_001100875, intron 7 of 10) intron (NM_001100875, intron 7 of 10) 3345 NR_036146 100422923 NR_036146 MIR548W - microRNA 548w ncRNA 0.031818 0.502262 -59(GGAGGAGAGTGA,-,0.00) 561_WT_peak_4 chr1 894413 894972 + 72 NA promoter-TSS (NM_015658) promoter-TSS (NM_015658) -13 NM_015658 26155 Hs.405987 NM_015658 HPRD:13166 NOC2L NET15|NET7|NIR|PPP1R112 nucleolar complex associated 2 homolog (S. cerevisiae) protein-coding 0.130590 0.739286 200(GCGGGAGGGCGC,-,0.00) 264(TCGGCGCC,+,0.00) 209(CGCGTTCG,+,0.00),211(CGTTCGCG,-,0.00) 174(CCGACCGC,+,0.00) 6(CCCGCGGC,-,0.00),268(CGCCCGGC,-,0.00) -1(CCTCGGAC,+,0.00),278(CGTAGGAC,+,0.00) 126(TTTCCCCG,-,0.00) 20(CTTGCGGCTCCC,-,0.00) 94(GCTGCGCA,+,0.00),107(GCCGCCCA,+,0.00),138(GCCGCGCC,+,0.00),328(GCCGCGCC,+,0.00) 111(CCCAGGCCCCGC,-,0.00) 0(CTCGGACCCGCG,+,0.00),22(TGCGGCTCCCCG,-,0.00),90(CGCGGCTGCGCA,-,0.00) -9(AAATCGGCCC,-,0.00) 107(GCCGCCCAGGCC,+,0.00) 133(GCCCCGCCGC,-,0.00) 109(CGCCCAGGCCCC,-,0.00) 561_WT_peak_3905 chr19 56632646 56632999 + 72 NA promoter-TSS (NM_001002836) promoter-TSS (NM_001002836) -80 NM_001002836 126208 Hs.397153 NM_001002836 HPRD:14032 ZNF787 TIP20 zinc finger protein 787 protein-coding 0.113314 0.754237 -113(CCCCCCTTCTCC,+,0.00) 8(AGCCACTT,-,0.00),20(AAGTGTCT,+,0.00) -46(CCGCTATCCCGG,+,0.00),87(CCCCCTTCCCGG,+,0.00) -111(CCCCTTCTCCCT,-,0.00) -127(CGCCCGCGCCGC,-,0.00) 178(CGCGCCTGCGCG,-,0.00) -161(CGCCCAGGCCGG,-,0.00),-90(CCCCCGGGCCGC,-,0.00) 561_WT_peak_6891 chr7 148959238 148959423 + 72 NA promoter-TSS (NM_001195220) promoter-TSS (NM_001195220) 68 NM_001195220 100289678 Hs.490512 NM_001195220 ENSG00000204946 ZNF783 - zinc finger family member 783 protein-coding 0.135135 0.741935 -164(GGCCGCCGAG,+,0.00) -98(CGCCCGGC,-,0.00) -61(CCGCTTCCGCCG,-,0.00) -51(CGTCGCTG,+,0.00) -44(GCCGCGCC,+,0.00) 561_WT_peak_2365 chr14 102172541 102172855 + 72 NA Intergenic CpG -24076 NR_026774 145200 Hs.150840 NR_026774 ENSG00000258512 LINC00239 C14orf72|NCRNA00239 long intergenic non-protein coding RNA 239 ncRNA 0.066879 0.714286 -118(TCGGCCTCCTTC,+,0.00) -89(CGCCCCGGAGGC,+,0.00),-21(AGCGCCGGAGGC,+,0.00),59(GGCGCCGGATTC,+,0.00) -119(CTCGGCCTCC,-,0.00) -35(AGGCCGCT,+,0.00) -114(CCTCCTTCCCAG,+,0.00) -58(CGCTGAGCCGCA,+,0.00) -94(GGCGCCGCCC,-,0.00) -100(CGTGGCGG,+,0.00) -103(GGCCGTGGCGGC,-,0.00) 125(GCTTCCCGGC,-,0.00) 561_WT_peak_2060 chr13 52027787 52028104 + 72 NA promoter-TSS (NM_001039938) promoter-TSS (NM_001039938) 464 NR_103812 100507398 Hs.594897 NR_103812 ENSG00000236778 INTS6-AS1 - INTS6 antisense RNA 1 ncRNA 0.053628 0.578616 -53(TCGCTCGG,-,0.00) -163(GGCGGGGG,+,0.00) 26(CAAAAAGGAAGC,+,0.00) -62(CACGGAGCCTCG,+,0.00) 561_WT_peak_7648 chrY 14775176 14775219 + 72 NA intron (NR_001545, intron 1 of 3) intron (NR_001545, intron 1 of 3) 899 NR_001545 64595 Hs.433656 NR_001545 ENSG00000233864 TTTY15 NCRNA00138 testis-specific transcript, Y-linked 15 (non-protein coding) ncRNA 0.046512 0.636364 561_WT_peak_126 chr1 27021450 27021665 + 72 NA promoter-TSS (NM_139135) promoter-TSS (NM_139135) -965 NM_006015 8289 Hs.468972 NM_006015 HPRD:04319 ARID1A B120|BAF250|BAF250a|BM029|C1orf4|ELD|MRD14|OSA1|P270|SMARCF1|hELD|hOSA1 AT rich interactive domain 1A (SWI-like) protein-coding 0.009302 0.435185 -49(TCACCCTCCTCT,+,0.00) -10(TCCCTCCCCT,+,0.00) 561_WT_peak_2020 chr13 44453624 44453855 + 72 NA promoter-TSS (NM_153218) promoter-TSS (NM_153218) 87 NM_144974 160857 Hs.170849 NM_144974 HPRD:13406 CCDC122 - coiled-coil domain containing 122 protein-coding 0.103896 0.719828 -22(CCTCCCTCCCGC,+,0.00),-15(CCCGCCTCCCGG,+,0.00),-14(CCGCCTCCCGGC,+,0.00) -59(CGCGTTCG,+,0.00) 1(TGGCACGA,-,0.00) -147(ACCGCCCA,+,0.00) -71(CGCTGGGCCCGC,-,0.00) -36(GCGGCCCTGGCC,+,0.00) 561_WT_peak_2570 chr15 79603555 79603799 + 72 NA exon (NM_001301203, exon 1 of 3) exon (NM_001301203, exon 1 of 3) 273 NR_125394 23423 Hs.513058 NM_007364 HPRD:18200 TMED3 C15orf22|P24B|p26 transmembrane emp24 protein transport domain containing 3 protein-coding 0.098361 0.706122 7(GGAGCAGGGCGT,-,0.00) 46(GCCGGGCG,+,0.00),52(CGCCCGGC,-,0.00) -51(GGGCCGAGCT,+,0.00) 561_WT_peak_3751 chr19 38540032 38540239 + 72 NA intron (NM_015073, intron 2 of 21) L1ME5|LINE|L1 142274 NM_015073 23094 Hs.655502 NM_015073 HPRD:18755 SIPA1L3 SPAL3 signal-induced proliferation-associated 1 like 3 protein-coding 0.028986 0.567308 -154(TAGCCACG,-,0.00) 561_WT_peak_5413 chr4 10005412 10005639 + 72 NA intron (NM_001001290, intron 3 of 12) MIR|SINE|MIR 17589 NM_020041 56606 Hs.656895 NM_020041 HPRD:05848 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 (facilitated glucose transporter), member 9 protein-coding 0.004405 0.447368 -17(CTGTTTTG,-,0.00) 561_WT_peak_3321 chr17 66097799 66097985 + 72 NA non-coding (NR_027418, exon 1 of 6) non-coding (NR_027418, exon 1 of 6) 196 NR_027418 100499466 Hs.591212 NR_027418 LINC00674 - long intergenic non-protein coding RNA 674 ncRNA 0.123656 0.737968 -27(AGGCCGCT,+,0.00) -58(GGCGACGA,-,0.00) 3(GGGCCCCAGCCC,+,0.00) -162(CCGTGCCG,+,0.00) -78(CCGCTCCCTCCG,-,0.00) -59(TGGCGACG,-,0.00) -148(ACCGCCCA,+,0.00) -89(GGCCGTGGCGTC,-,0.00) 561_WT_peak_2256 chr14 64970550 64971040 + 72 NA promoter-TSS (NM_014950) promoter-TSS (NM_014950) -241 NM_006977 7597 Hs.654571 NM_006977 ZBTB25 C14orf51|KUP|ZNF46 zinc finger and BTB domain containing 25 protein-coding 0.095918 0.720978 301(GGGGCAGGGCGA,-,0.00) 158(GGAGGCCGAG,+,0.00) -111(GCGCCCTCCCGC,+,0.00),-103(CCGCCCGCCCGC,+,0.00) -122(TGCGTACG,+,0.00),-120(CGTACGTG,-,0.00),-116(CGTGCGCG,-,0.00) -150(AGGGCCGGGG,-,0.00) -84(GCCGGGCG,+,0.00),-80(GGCGGGGG,+,0.00),167(GCCGCGGG,+,0.00),213(GGCGGGGG,+,0.00) 148(GCGGGGCCAGGG,+,0.00),274(GCGGGGACTGGG,+,0.00) 161(GGCCGAGCCGCG,+,0.00) -156(GGCGCCAGGGCC,+,0.00),152(GGCCAGGGAGGC,-,0.00),207(GGGCATGGCGGG,-,0.00) 561_WT_peak_3507 chr18 51795745 51796137 + 72 NA promoter-TSS (NM_007195) promoter-TSS (NM_007195) 92 NM_007195 11201 Hs.438533 NM_007195 HPRD:16094 POLI RAD30B|RAD3OB polymerase (DNA directed) iota protein-coding 0.107143 0.712468 34(GGAGGAAGGCGG,-,0.00) 145(AGCGGCCT,-,0.00) 44(GGCGGCGA,-,0.00),47(GGCGACGA,-,0.00) 24(TGGAGCCGGAGG,+,0.00) -98(ACTGCGCA,+,0.00) 137(GAGGAGCCAGCG,+,0.00) 125(GCGCCGCAGC,-,0.00) 108(CAGCCAGCTCGC,-,0.00) 561_WT_peak_5386 chr4 873383 873438 + 72 NA intron (NM_005255, intron 15 of 27) L1MEc|LINE|L1 52764 NM_005255 2580 Hs.369607 NM_005255 HPRD:03631 GAK DNAJ26|DNAJC26 cyclin G associated kinase protein-coding 0.054545 0.553571 561_WT_peak_2468 chr15 45493043 45493515 + 72 NA promoter-TSS (NM_138356) promoter-TSS (NM_138356) 94 NM_138356 90525 Hs.310399 NM_138356 HPRD:14272 SHF - Src homology 2 domain containing F protein-coding 0.063559 0.560254 197(GAATCCGAGTCA,-,0.00) -156(AGAGACTT,-,0.00) -3(CAGCGCTCCCGG,+,0.00) 122(TCGTGGCG,+,0.00) 18(CGGGTGAA,+,0.00) 237(GGGCCTCTTT,+,0.00) 561_WT_peak_7220 chr9 19128454 19128480 + 72 NA promoter-TSS (NR_038064) promoter-TSS (NR_038064) -863 NM_001122 123 Hs.3416 NM_001122 HPRD:00057 PLIN2 ADFP|ADRP perilipin 2 protein-coding 0.038462 0.481481 561_WT_peak_4714 chr20 60877664 60877875 + 72 NA promoter-TSS (NM_001281438) promoter-TSS (NM_001281438) -183 NM_175573 11047 Hs.90107 NM_007002 HPRD:06440 ADRM1 ARM-1|ARM1|GP110 adhesion regulating molecule 1 protein-coding 0.104265 0.740566 -129(CCGGGCGGGCGA,-,0.00) -121(GCGACGCC,+,0.00) -51(CCCTGGCGCCGC,-,0.00) -105(GGCTCGGCCC,-,0.00),4(GGGCCGCTCT,+,0.00) -53(GTCCCTGGCGCC,-,0.00) 561_WT_peak_5774 chr5 64919961 64920064 + 72 NA promoter-TSS (NM_001093756) promoter-TSS (NM_001093756) 175 NM_033228 373 Hs.792 NM_001656 HPRD:03449 TRIM23 ARD1|ARFD1|RNF46 tripartite motif containing 23 protein-coding 0.048544 0.615385 -89(CCCCCGGC,-,0.00) 561_WT_peak_544 chr1 155035773 155035793 + 72 NA promoter-TSS (NM_005227) promoter-TSS (NM_005227) -430 NM_182690 1945 Hs.449913 NM_005227 HPRD:03224 EFNA4 EFL4|EPLG4|LERK4 ephrin-A4 protein-coding 0.000000 0.571429 561_WT_peak_7099 chr8 103597594 103597766 + 72 NA Intergenic Intergenic 33832 NM_024410 4956 Hs.159274 NM_024410 HPRD:01687 ODF1 CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF outer dense fiber of sperm tails 1 protein-coding 0.017442 0.381503 561_WT_peak_4688 chr20 50807988 50808305 + 72 NA exon (NM_022088, exon 1 of 5) exon (NM_022088, exon 1 of 5) 378 NM_199426 55734 Hs.473082 NM_018197 HPRD:15728 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding 0.107256 0.685535 -130(GATTTCGGGGCC,-,0.00) -71(AGCGCGCA,+,0.00),-52(AGCGCGCA,+,0.00) -83(CCCGGGCCCCGG,-,0.00) -152(CGCGGCTCCGAG,-,0.00) -158(CCGAGACG,-,0.00),-10(CCGCGAAG,-,0.00),146(CGAGGCGG,+,0.00) 561_WT_peak_4906 chr22 37634602 37634773 + 72 NA intron (NM_002872, intron 2 of 6) L2a|LINE|L2 5652 NM_002872 5880 Hs.517601 NM_002872 HPRD:03628 RAC2 EN-7|Gx|HSPC022|p21-Rac2 ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) protein-coding 0.046784 0.598837 561_WT_peak_1618 chr12 14518977 14519263 + 72 NA intron (NM_001286515, intron 1 of 12) intron (NM_001286515, intron 1 of 12) 554 NM_001286515 55729 Hs.504856 NM_018179 HPRD:09811 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding 0.017483 0.310105 -133(TGGACGCC,+,0.00) 561_WT_peak_939 chr10 31608193 31608369 + 72 NA promoter-TSS (NR_024284) promoter-TSS (NR_024284) 180 NM_001174095 6935 Hs.124503 NM_030751 HPRD:01798 ZEB1 AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A zinc finger E-box binding homeobox 1 protein-coding 0.090909 0.717514 -152(CCCGCGGC,-,0.00) -70(GGGGTGAGGGGG,-,0.00) -108(GCGGAGTCAGGG,+,0.00) -117(CGGGGAGCGGCG,+,0.00) -87(CAGCCGGGGCGC,-,0.00) 561_WT_peak_639 chr1 179923517 179924386 + 72 NA promoter-TSS (NM_014810) promoter-TSS (NM_014810) 43 NM_014810 9857 Hs.413045 NM_014810 HPRD:09870 CEP350 CAP350|GM133 centrosomal protein 350kDa protein-coding 0.084005 0.652874 286(CTGGGCCGCC,-,0.00) 317(CCGGGGAGCGGG,-,0.00),658(CCGCGGTCCCGG,+,0.00),666(CCGGGTCCCCGG,+,0.00) 48(TCGACGCA,+,0.00) 514(CCGGTCGG,-,0.00) 697(GCCGGGCG,+,0.00) 214(TCGCGCCG,+,0.00),681(CGGCAAGA,-,0.00) 30(GTCCTACG,-,0.00) 74(CGGTTCTG,-,0.00) 356(GGGAGCCGCAGC,+,0.00),567(GGTAGCCGAGGG,+,0.00) -52(TGCGCAGC,-,0.00) 238(CGCTGGCGCCGC,-,0.00),324(GCGGGGCCAGAC,+,0.00),692(GCGGGGCCGGGC,+,0.00) 544(CCAGGCTCCGCG,-,0.00),625(CGCGGAGTCTCG,+,0.00) 521(GGGCGGCGTC,+,0.00) 69(CTTCGCGG,+,0.00) 216(GCGCCGCCGC,-,0.00),420(CCTTCCCAGC,-,0.00) 490(AGGCCAGGCCGG,-,0.00) 561_WT_peak_3154 chr17 37558028 37558377 + 72 NA promoter-TSS (NM_001184906) promoter-TSS (NM_001184906) -293 NM_032875 84961 Hs.462946 NM_032875 HPRD:10951 FBXL20 Fbl2|Fbl20 F-box and leucine-rich repeat protein 20 protein-coding 0.106017 0.717143 -139(CGGCGCTCCCGG,+,0.00) -107(CGGCACGA,-,0.00) 79(CCCTCTCCTCCC,+,0.00) 95(CGGGCAAA,+,0.00) -117(TGCGCGGC,-,0.00),48(TGCGCGGG,-,0.00) 10(CGCGGACCAGCG,+,0.00) 561_WT_peak_6294 chr6 33239269 33239510 + 72 NA promoter-TSS (NM_022551).4 promoter-TSS (NM_022551).4 353 NM_001289175 6293 Hs.480356 NM_022553 HPRD:09142 VPS52 ARE1|SAC2|SACM2L|dJ1033B10.5 vacuolar protein sorting 52 homolog (S. cerevisiae) protein-coding 0.074689 0.648760 -20(GTTCCCGGGCCG,-,0.00) -7(AGCCGCCA,-,0.00) -6(GCCGCCATGGTC,+,0.00) 561_WT_peak_6385 chr6 86388806 86389104 + 72 NA promoter-TSS (NR_003038) promoter-TSS (NR_003038) -504 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG|bA33E24.2 small nucleolar RNA host gene 5 (non-protein coding) ncRNA 0.077181 0.678930 11(AAACGCTT,-,0.00) -87(TGGCTGGCGCTG,-,0.00) -138(GCGCAGGGCGGC,-,0.00) -97(GCTGGCTGGCTG,+,0.00),-93(GCTGGCTGGCTG,+,0.00) 561_WT_peak_414 chr1 120906235 120906495 + 72 NA non-coding (NR_027337, exon 1 of 2) non-coding (NR_027337, exon 1 of 2) 331 NR_027337 337875 Hs.742189 NR_027337 HIST2H2BA - histone cluster 2, H2ba (pseudogene) pseudo 0.084615 0.597701 79(AGCCACTT,-,0.00) -21(GTCCGAGG,-,0.00) -125(GCGTCCCGCCTG,+,0.00) 561_WT_peak_7588 chrX 84258942 84259094 + 72 NA intron (NM_198450, intron 1 of 8) intron (NM_198450, intron 1 of 8) 120 NM_198450 139322 Hs.512181 NM_198450 APOOL CXorf33|FAM121A|UNQ8193 apolipoprotein O-like protein-coding 0.019737 0.457516 -58(GGGTTTTG,-,0.00) 561_WT_peak_4120 chr2 68954182 68954406 + 72 NA Intergenic Intergenic -7619 NM_001007231 9938 Hs.531807 NM_014882 HPRD:09805 ARHGAP25 HEL-S-308|KAIA0053 Rho GTPase activating protein 25 protein-coding 0.040179 0.502222 -11(CTGCACGA,-,0.00) 561_WT_peak_4506 chr2 235201330 235201584 + 72 NA Intergenic Intergenic 204236 NM_005737 10123 Hs.111554 NM_005737 HPRD:11988 ARL4C ARL7|LAK ADP-ribosylation factor-like 4C protein-coding 0.003937 0.388235 561_WT_peak_5216 chr3 119013618 119013716 + 72 NA 5' UTR (NM_020754, exon 1 of 12) 5' UTR (NM_020754, exon 1 of 12) 447 NM_020754 57514 Hs.668218 NM_020754 HPRD:16697 ARHGAP31 AOS1|CDGAP Rho GTPase activating protein 31 protein-coding 0.081633 0.676768 -130(GCCGCGGG,+,0.00) -136(CCCAGAGCCGCG,+,0.00) -130(GCCGCGGGGC,+,0.00) 561_WT_peak_2861 chr16 58663261 58663729 + 72 NA intron (NR_049763, intron 1 of 49) CpG 295 NM_206999 23019 Hs.460923 NM_016284 HPRD:11999 CNOT1 CDC39|NOT1|NOT1H CCR4-NOT transcription complex, subunit 1 protein-coding 0.081197 0.675906 254(GACTCCGGCTCT,-,0.00) 97(AAACGCTT,-,0.00),210(AGGCGGCT,+,0.00) 268(TCGACCCC,+,0.00) -88(AGGCCCGGGA,-,0.00) -126(CGACACGA,-,0.00) 230(GACACAGGAAAC,+,0.00) 43(CCGCCTCG,-,0.00) 61(CCGTCCCGGCTG,+,0.00) 561_WT_peak_2580 chr15 83654646 83655084 + 72 NA promoter-TSS (NM_031452) promoter-TSS (NM_031452) -90 NM_031452 83640 Hs.80624 NM_031452 HPRD:12845 FAM103A1 C15orf18|HsT19360|RAM family with sequence similarity 103, member A1 protein-coding 0.059361 0.574032 -109(CGTCTCTA,+,0.00) -105(TCTACCCG,-,0.00) 561_WT_peak_1247 chr11 34256832 34257019 + 72 NA intron (NM_145804, intron 1 of 16) MIRb|SINE|MIR 122630 NM_145804 25841 Hs.23361 NM_145804 HPRD:10624 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding 0.016043 0.404255 -72(AAGCGGAT,+,0.00) 561_WT_peak_7366 chr9 99540374 99540614 + 72 NA promoter-TSS (NM_014930) promoter-TSS (NM_014930) -166 NM_014930 22869 Hs.75264 NM_014930 HPRD:18348 ZNF510 - zinc finger protein 510 protein-coding 0.054167 0.497925 -115(TGCGCGGT,-,0.00) 561_WT_peak_5384 chr4 492948 493188 + 72 NA promoter-TSS (NM_017733) promoter-TSS (NM_017733) 79 NR_110293 54872 Hs.7099 NM_017733 HPRD:07890 PIGG GPI7|LAS21|PRO4405|RLGS1930 phosphatidylinositol glycan anchor biosynthesis, class G protein-coding 0.129167 0.680498 -44(GCAGCAGGGCGA,-,0.00) -62(GGAGCCGGAAGC,+,0.00) -74(AGGCGGCT,+,0.00),13(ATGCGGCT,+,0.00) -129(CGGCGGAC,+,0.00) 37(GCTACCTGTTGC,-,0.00) 561_WT_peak_4223 chr2 97524002 97524182 + 72 NA promoter-TSS (NM_016466) promoter-TSS (NM_016466) -336 NM_016466 51239 Hs.709507 NM_016466 HPRD:14614 ANKRD39 - ankyrin repeat domain 39 protein-coding 0.100000 0.723757 -142(GCCGCCGGGCCG,-,0.00) -48(AGCGACCT,-,0.00) -93(CCGGTCGG,-,0.00) -7(AGGGCAGGGA,-,0.00) -141(CCGCCGGGCCGC,-,0.00) 561_WT_peak_5297 chr3 156534186 156535059 + 72 NA intron (NR_038387, intron 1 of 2) CpG 229 NR_038387 730091 Hs.659905 NR_038387 ENSG00000240875 LINC00886 - long intergenic non-protein coding RNA 886 ncRNA 0.111111 0.707094 196(GGAGGCCGAG,+,0.00) -9(CCGGGCTCCCGG,+,0.00),580(CCGGGCGGGAGG,-,0.00) -154(CAGCGCCGGCCC,+,0.00),89(CCGCGCCCGCCC,+,0.00) 162(CCGCCCGA,+,0.00),166(CCGACGGA,+,0.00) 175(CGGGCAGGGA,-,0.00) -58(CGCCCGGC,-,0.00),98(CCCCCGCC,-,0.00),360(GCCGGGCG,+,0.00),579(GCCGGGCG,+,0.00),611(CGCCCGGC,-,0.00) 404(CGGCACGC,-,0.00) 142(CTCTCTCCGCCC,+,0.00),198(AGGCCGAGAGGG,-,0.00),226(GACTCTCAGCCC,+,0.00) 164(GCCCGACG,-,0.00) 428(GCACCAGGAAGC,+,0.00),462(GAAGCAGGCAGC,+,0.00) 508(GGCGCGGC,-,0.00) 81(GGCTGCCCCCGC,-,0.00),472(GCGGGGGCGGGG,+,0.00),478(GCGGGGCCGGCG,+,0.00),501(CGCAGGCGGCGC,-,0.00) 22(GGCAGCTCCGCG,-,0.00) 605(GGGCGGCGCC,+,0.00) 29(CCGCGAAG,-,0.00) 256(GTTTCGCAGC,-,0.00) 130(GCCGCCTTGCTG,+,0.00) 561_WT_peak_5415 chr4 10182651 10182800 + 72 NA Intergenic Intergenic -64152 NM_017491 9948 Hs.128548 NM_005112 HPRD:09199 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding 0.013423 0.520000 -32(AAGCCTCT,+,0.00) -145(CTGTTTTG,-,0.00) 561_WT_peak_2638 chr16 188669 188996 + 72 NA promoter-TSS (NM_001039476) promoter-TSS (NM_001039476) -135 NM_001243249 8131 Hs.19699 NM_012075 HPRD:11866 NPRL3 C16orf35|CGTHBA|HS-40|MARE|NPR3|RMD11 nitrogen permease regulator-like 3 (S. cerevisiae) protein-coding 0.116208 0.667683 -130(GGCGGCCGGG,+,0.00),131(GGAGGCCGAG,+,0.00) 33(GGGGTCGA,-,0.00) 95(GGCGCGGT,-,0.00) 137(CGAGGCGG,+,0.00) 561_WT_peak_5329 chr3 176919584 176919792 + 72 NA Intergenic Intergenic -4640 NM_024665 79718 Hs.715026 NM_024665 HPRD:15476 TBL1XR1 C21|DC42|IRA1|TBLR1 transducin (beta)-like 1 X-linked receptor 1 protein-coding 0.014423 0.430622 561_WT_peak_4883 chr22 31136377 31136739 + 72 NA intron (NM_030758, intron 1 of 13) LTR8|LTR|ERV1 9014 NR_036171 100422912 NR_036171 MIR3200 - microRNA 3200 ncRNA 0.008287 0.415978 561_WT_peak_386 chr1 113160681 113161054 + 72 NA intron (NM_138729, intron 1 of 13) intron (NM_138729, intron 1 of 13) 1173 NM_138727 54879 Hs.201921 NM_017744 HPRD:18112 ST7L FAM4B|ST7R|STLR suppression of tumorigenicity 7 like protein-coding 0.018767 0.377005 69(GACGTCGA,-,0.00) 561_WT_peak_7328 chr9 88969072 88969368 + 72 NA 5' UTR (NM_001185074, exon 1 of 20) 5' UTR (NM_001185074, exon 1 of 20) 182 NM_024617 79670 Hs.597057 NM_024617 HPRD:11697 ZCCHC6 PAPD6|TUT7 zinc finger, CCHC domain containing 6 protein-coding 0.074324 0.653199 -83(CGAGGAGGCCGG,-,0.00) -73(GGCGGGGG,+,0.00) 119(CCTTCGGCCCCA,-,0.00) -48(CCGGGGCCAGGC,+,0.00) 62(CCTTCGCCGC,-,0.00) -118(CCGGCCTGGGGG,+,0.00),-46(GGGGCCAGGCCG,+,0.00),-45(GGGCCAGGCCGG,-,0.00) 561_WT_peak_991 chr10 51827386 51827752 + 72 NA promoter-TSS (NR_038275) promoter-TSS (NR_038275) -6 NR_038275 100421577 Hs.712902 NR_038275 FAM21EP - family with sequence similarity 21, member A pseudogene pseudo 0.079235 0.686649 148(GCTTCCGGGGCT,-,0.00) -73(CAGCGCCACCCG,+,0.00) 194(CCCACCGA,+,0.00) -17(CAGCTTCCTCCG,-,0.00),42(CAGCTTCCTCCC,-,0.00) 185(GCTTCGGAGC,-,0.00) -63(CGGCCAACCCGC,-,0.00),129(GCAGCTTGGCTG,+,0.00) 561_WT_peak_3294 chr17 61776738 61776922 + 72 NA promoter-TSS (NR_046273) promoter-TSS (NR_046273) 689 NM_030576 80774 Hs.591166 NM_030576 HPRD:14407 LIMD2 - LIM domain containing 2 protein-coding 0.043478 0.686486 -45(TCACCCACCTCC,+,0.00) -160(AGCCCGGCCC,-,0.00) -161(CAGCCCGGCCCC,-,0.00) 561_WT_peak_3820 chr19 47616671 47616885 + 72 NA intron (NM_015168, intron 1 of 14) CpG-14022 231 NM_015168 23211 Hs.104661 NM_015168 ENSG00000130749 ZC3H4 C19orf7 zinc finger CCCH-type containing 4 protein-coding 0.074766 0.553488 -117(AGAGCCGAAAGC,+,0.00) -150(CGGGGAAGGAGG,-,0.00) -19(GGGCTGAAGGGG,-,0.00) 34(AAAAACCG,+,0.00) -24(GGGCGGGGCT,+,0.00) 561_WT_peak_5049 chr3 31796235 31796408 + 72 NA intron (NM_001174060, intron 3 of 10) L1MDb|LINE|L1 50616 NR_049771 100874206 Hs.662428 NR_049771 ENSG00000232490 OSBPL10-AS1 - OSBPL10 antisense RNA 1 ncRNA 0.005780 0.356322 561_WT_peak_5707 chr5 40755323 40755531 + 72 NA intron (NM_012382, intron 1 of 4) intron (NM_012382, intron 1 of 4) 645 NM_012382 23548 Hs.348915 NM_012382 HPRD:17807 TTC33 OSRF tetratricopeptide repeat domain 33 protein-coding 0.024038 0.430622 -36(CAAAAACG,+,0.00) -85(TGGGTAAA,+,0.00),-42(TTTACCCA,-,0.00) 561_WT_peak_3197 chr17 42297727 42298069 + 72 NA promoter-TSS (NM_014233) promoter-TSS (NM_014233) 352 NM_001076683 7343 Hs.89781 NM_014233 HPRD:02814 UBTF NOR-90|UBF|UBF-1|UBF1|UBF2 upstream binding transcription factor, RNA polymerase I protein-coding 0.116959 0.635569 97(AGCCGGTT,-,0.00) -163(CCCGCCTCCCGG,+,0.00) -79(GGCGTCCA,-,0.00),152(TCGGCGCC,+,0.00) -155(CCGGAGCGAGCG,+,0.00) 84(GGGCCGCTGT,+,0.00) 155(GCGCCGCCGC,-,0.00) 561_WT_peak_2225 chr14 55878350 55878766 + 72 NA promoter-TSS (NM_014924) promoter-TSS (NM_014924) 18 NM_014924 22863 Hs.414809 NM_014924 HPRD:13820 ATG14 ATG14L|BARKOR|KIAA0831 autophagy related 14 protein-coding 0.081731 0.673861 142(CTCCGCCGCC,-,0.00) 30(GGCCTGAGAGGA,-,0.00) 239(CTAGTCGG,+,0.00) -97(GCTCCACAGC,-,0.00) 561_WT_peak_4789 chr21 37546097 37546361 + 72 NA intron (NM_005128, intron 2 of 36) intron (NM_005128, intron 2 of 36) 9390 NM_005128 9980 Hs.204575 NM_005128 HPRD:07271 DOPEY2 21orf5|C21orf5 dopey family member 2 protein-coding 0.011364 0.354717 561_WT_peak_4236 chr2 101840291 101840546 + 72 NA Intergenic LTR45B|LTR|ERV1 -28927 NM_017546 55571 Hs.744080 NM_017546 HPRD:12812 CNOT11 C2orf29 CCR4-NOT transcription complex, subunit 11 protein-coding 0.023529 0.511719 -120(AAGCGTTT,+,0.00) 49(AGGGCAGGAA,-,0.00) 84(GGGTTTTG,-,0.00) -126(AGGGTAAA,+,0.00) 561_WT_peak_625 chr1 173445910 173446125 + 72 NA promoter-TSS (NM_004905) promoter-TSS (NM_004905) 277 NR_037845 100506023 Hs.731284 NR_037845 LOC100506023 - uncharacterized LOC100506023 ncRNA 0.097674 0.675926 16(TCCTGCCG,+,0.00) -85(TGCGCAGC,-,0.00) -69(CGCGGACCCGTG,+,0.00) -53(GCCCAGGGCGGC,-,0.00) 561_WT_peak_1160 chr10 123687653 123687955 + 72 NA promoter-TSS (NM_007041) promoter-TSS (NM_007041) -23 NR_120495 100130887 Hs.650058 NR_120495 ENSG00000226864 ATE1-AS1 - ATE1 antisense RNA 1 (head to head) ncRNA 0.096026 0.669967 9(GGCGGCCGCG,+,0.00) 27(GGCGTCGG,-,0.00),120(CCGACGCC,+,0.00) -18(CCCCCGCC,-,0.00) -82(GAAACAGGATGG,+,0.00) 4(GGCGCGGC,-,0.00),13(GCCGCGCC,+,0.00) 122(GACGCCATGGCC,+,0.00),124(CGCCATGGCCGC,-,0.00) 561_WT_peak_3654 chr19 14492234 14492651 + 72 NA intron (NM_001025160, intron 1 of 18) intron (NM_001025160, intron 1 of 18) 486 NM_001784 976 Hs.466039 NM_001784 HPRD:03130 CD97 TM7LN1 CD97 molecule protein-coding 0.045564 0.653110 72(AGCCACAT,-,0.00) -82(TCCTGCCG,+,0.00),145(CGGCAGGA,-,0.00) -86(CCGCTCCTGCCG,-,0.00) 27(GAAACGGGAGGC,+,0.00),63(GATAGAGGAAGC,+,0.00) 52(GTGGGGCCTGCG,+,0.00) -29(GGGGCCCCGCTG,+,0.00) 561_WT_peak_5260 chr3 132136374 132136545 + 72 NA promoter-TSS (NM_015268) promoter-TSS (NM_015268) -94 NM_015268 23317 Hs.12707 NM_015268 HPRD:10915 DNAJC13 RME8 DnaJ (Hsp40) homolog, subfamily C, member 13 protein-coding 0.081871 0.726744 -126(GGAGGAGGCGGA,-,0.00) -78(CCCGCGGC,-,0.00),-51(GGCGGGGG,+,0.00) -90(CGGCACCA,-,0.00) -72(GCAGCGGAGC,+,0.00) 561_WT_peak_2806 chr16 33963731 33964233 + 72 NA Intergenic SSU-rRNA_Hsa|rRNA|rRNA -1479 NR_038368 649159 Hs.532675 NM_001040069 ENSG00000256642 LINC00273 NCRNA00273|TOP long intergenic non-protein coding RNA 273 ncRNA 0.039841 0.530815 27(GCGGTCGG,-,0.00) 281(TCCCTGCCCT,+,0.00) 178(CGGGTAAC,+,0.00) 561_WT_peak_4019 chr2 32503051 32503280 + 72 NA 5' UTR (NM_032312, exon 1 of 6) 5' UTR (NM_032312, exon 1 of 6) 207 NM_032312 84272 Hs.468099 NM_032312 YIPF4 FinGER4 Yip1 domain family, member 4 protein-coding 0.135371 0.734783 15(GCCTCCGGGCCC,-,0.00) -59(CGCGGCCGCC,-,0.00) -66(TCGCCGCC,+,0.00) 28(CCCCCGGC,-,0.00) 17(CTCCGGGCCCGC,-,0.00) -54(CCGCCTCG,-,0.00) -64(GCCGCCGCGGCC,+,0.00) 561_WT_peak_2862 chr16 58664070 58664274 + 71 NA promoter-TSS (NM_001265612) promoter-TSS (NM_001265612) -382 NM_016284 23019 Hs.460923 NM_016284 HPRD:11999 CNOT1 CDC39|NOT1|NOT1H CCR4-NOT transcription complex, subunit 1 protein-coding 0.039216 0.512195 6(CCTTCCTCTTTC,-,0.00) -42(TGCGCGGG,-,0.00) 561_WT_peak_4276 chr2 119067837 119068063 + 71 NA Intergenic Intergenic 221900 NM_016133 51141 Hs.7089 NM_016133 HPRD:16361 INSIG2 - insulin induced gene 2 protein-coding 0.061947 0.480176 -161(GCCGCGCC,+,0.00) 561_WT_peak_7386 chr9 111864088 111864381 + 71 NA intron (NM_032012, intron 3 of 17) intron (NM_032012, intron 3 of 17) 17991 NM_032012 23731 Hs.308074 NM_032012 HPRD:09866 TMEM245 C9orf5|CG-2|CG2 transmembrane protein 245 protein-coding 0.006826 0.387755 561_WT_peak_6242 chr6 28834324 28834859 + 71 NA Intergenic LTR12C|LTR|ERV1 -3137 NR_033379 401242 Hs.448285 NR_033379 ENSG00000225595 LOC401242 - uncharacterized LOC401242 ncRNA 0.080374 0.660448 -23(AAGCCTCT,+,0.00),297(TGGCGGCT,+,0.00) -157(TCGGGCCG,+,0.00) 258(AGGCTGTGAGGG,-,0.00) -153(GCCGCGCA,+,0.00) 24(GCGGAGCCCGCC,+,0.00),60(CGCTGGGCCCGC,-,0.00),209(GCGCGGCCAGAG,+,0.00) 80(CGCGCAGCCTCG,+,0.00) 10(GGGCCGCTCC,+,0.00) -142(GCCCATGGCGGG,-,0.00),-118(AGGCATGGCGGG,-,0.00),146(CCGGCCTTGGCC,+,0.00),223(GGCGCCAAGGCC,+,0.00) 561_WT_peak_3404 chr17 81153466 81153680 + 71 NA Intergenic Intergenic -21093 NR_029406 388574 Hs.546918 NR_029406 ENSG00000232938 FLJ43681 - ribosomal protein L23a pseudogene pseudo 0.084112 0.734884 20(CGCGTGCG,+,0.00) 561_WT_peak_7186 chr8 145133349 145133621 + 71 NA promoter-TSS (NM_019037) promoter-TSS (NM_019037) -37 NM_019037 54512 Hs.632041 NM_019037 HPRD:16221 EXOSC4 RRP41|RRP41A|Rrp41p|SKI6|Ski6p|hRrp41p|p12A exosome component 4 protein-coding 0.110294 0.655678 32(GATTCCGGGCGG,-,0.00) -116(CGGGGAGGTCGG,-,0.00),36(CCGGGCGGTCGG,-,0.00) 40(GCGGTCGG,-,0.00) 70(CCCGCGGC,-,0.00) 72(CGCGGCTCAGAG,-,0.00) -105(GGGCCGCGGT,+,0.00) 561_WT_peak_6863 chr7 138794474 138794845 + 71 NA promoter-TSS (NM_020119) promoter-TSS (NM_020119) -194 NM_024625 56829 Hs.133512 NM_020119 HPRD:09534 ZC3HAV1 ARTD13|FLB6421|PARP13|ZAP|ZC3H2|ZC3HDC2 zinc finger CCCH-type, antiviral 1 protein-coding 0.056604 0.575269 -136(CCGACTGA,+,0.00) 561_WT_peak_1115 chr10 101630137 101630458 + 71 NA Intergenic AluJr|SINE|Alu -56669 NR_024130 100188954 Hs.656104 NR_024130 DNMBP-AS1 NCRNA00093|bA287G8.2 DNMBP antisense RNA 1 ncRNA 0.003115 0.459627 135(CAGGCAGGCACC,-,0.00) 561_WT_peak_7630 chrX 153626780 153627173 + 71 NA intron (NM_001256580, intron 2 of 5) CpG-28476 405 NM_001256577 6134 Hs.534404 NM_006013 HPRD:02421 RPL10 AUTSX5|DXS648|DXS648E|L10|NOV|QM ribosomal protein L10 protein-coding 0.071247 0.560914 140(AAGCGACG,-,0.00) -19(CGGGGAAA,+,0.00) 127(CGTGTCGG,+,0.00) -89(GTCGCCATGGGC,+,0.00) 561_WT_peak_1195 chr11 6633508 6633903 + 71 NA promoter-TSS (NM_006284) promoter-TSS (NM_006284) -230 NM_006284 6881 Hs.5158 NM_006284 TAF10 TAF2A|TAF2H|TAFII30 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa protein-coding 0.073418 0.613636 -125(CCCGCCTCCTCC,+,0.00) 79(GGCTTCGA,-,0.00) 61(GTCTGACG,-,0.00) -15(GCTCCGCGGC,-,0.00) 561_WT_peak_2355 chr14 98460538 98460728 + 71 NA Intergenic Intergenic -16172 NR_015430 388011 Hs.651477 NR_015430 ENSG00000246223 C14orf64 - chromosome 14 open reading frame 64 ncRNA 0.010526 0.507853 -163(GGGAGCAGGAGG,+,0.00) 561_WT_peak_3916 chr19 57946796 57947010 + 71 NA 5' UTR (NM_001023561, exon 1 of 3) 5' UTR (NM_001023561, exon 1 of 3) 210 NM_001023561 388567 Hs.467358 NM_001023561 HPRD:18610 ZNF749 - zinc finger protein 749 protein-coding 0.102804 0.688372 -29(GGAGGAGGCCGC,-,0.00) -7(CTGACCGA,+,0.00) -156(CGCGAGAAGCGG,+,0.00) -22(GCCGCGCC,+,0.00) 561_WT_peak_1641 chr12 30848872 30849118 + 71 NA promoter-TSS (NM_006390) promoter-TSS (NM_006390) -66 NM_006390 10526 Hs.505136 NM_006390 HPRD:09282 IPO8 RANBP8 importin 8 protein-coding 0.081301 0.587045 -22(CCGCCTCTTCCC,-,0.00) -131(GCCGCCATGCTG,+,0.00) -63(CAGGCAGGCGGC,-,0.00) 561_WT_peak_4709 chr20 58515491 58515788 + 71 NA promoter-TSS (NM_006242) promoter-TSS (NM_006242) 195 NM_001190827 63939 Hs.54973 NM_022106 HPRD:12758 FAM217B C20orf177|dJ551D2.5 family with sequence similarity 217, member B protein-coding 0.084175 0.597315 120(TCGAGGCC,+,0.00) -143(GCCGGGCG,+,0.00) 75(AAAAACCG,+,0.00) -129(CGCGGGCGCCGG,-,0.00) -151(GCGCCGCAGC,-,0.00) 561_WT_peak_1777 chr12 76425485 76425789 + 71 NA promoter-TSS (NM_007350) promoter-TSS (NM_007350) -81 NM_007350 22822 Hs.602085 NM_007350 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology-like domain, family A, member 1 protein-coding 0.101974 0.688525 -13(AGCCCCGGAAAC,+,0.00) -151(CTCGGCAGCC,-,0.00) -97(TCCACGCC,+,0.00),-65(TCGCCGCC,+,0.00) 92(CCGCTTCTCCCC,-,0.00) -63(GCCGCCCA,+,0.00) -152(GCTCGGCAGC,-,0.00),69(GCTGCGAGGC,+,0.00) 30(GAGCCCTGGCTG,+,0.00) 561_WT_peak_2579 chr15 83635548 83635718 + 71 NA Intergenic Intergenic -14157 NM_199330 9455 Hs.578443 NM_004839 HPRD:07269 HOMER2 ACPD|CPD|HOMER-2|VESL-2 homer homolog 2 (Drosophila) protein-coding 0.000000 0.356725 561_WT_peak_2542 chr15 72520638 72520949 + 71 NA intron (NM_001206798, intron 1 of 10) AluYc|SINE|Alu 1270 NM_001206799 5315 Hs.534770 NM_002654 HPRD:01529 PKM CTHBP|HEL-S-30|OIP3|PK3|PKM2|TCB|THBP1 pyruvate kinase, muscle protein-coding 0.025723 0.448718 561_WT_peak_3304 chr17 62502734 62503018 + 71 NA promoter-TSS (NM_138363) promoter-TSS (NM_138363) -282 NM_138363 90799 Hs.569713 NM_138363 HPRD:11279 CEP95 CCDC45 centrosomal protein 95kDa protein-coding 0.105634 0.624561 -142(GGGGGAAGGCGG,-,0.00) 29(CCGTCCGA,+,0.00),67(TTGGTCGG,-,0.00) 30(CGTCCGAC,+,0.00),31(GTCCGACC,-,0.00) 62(GGGTTTTG,-,0.00),97(CCAAACCG,+,0.00) -134(GCGGGGCCTGGC,+,0.00) -132(GGGGCCTGGCGT,+,0.00) 561_WT_peak_1753 chr12 68024571 68024774 + 71 NA Intergenic Charlie8|DNA|hAT-Charlie -17840 NM_006482 8445 Hs.173135 NM_003583 DYRK2 - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding 0.009852 0.490196 -77(TGGGTAAA,+,0.00) 561_WT_peak_5892 chr5 127418974 127419262 + 71 NA promoter-TSS (NM_001046) promoter-TSS (NM_001046) -352 NR_015360 644873 Hs.340623 NR_015360 ENSG00000245937 LINC01184 - long intergenic non-protein coding RNA 1184 ncRNA 0.121528 0.730104 -40(GGAGGAAGGCGG,-,0.00) -65(GGCGGGGG,+,0.00) 48(TCGCGCCG,+,0.00),57(TCGTGCTG,+,0.00) -28(CGGAAGAGGAGG,+,0.00) -56(GGGAGGTGAAGG,+,0.00) 30(GCCGCGCC,+,0.00) 94(GGCTGGCCGCGC,-,0.00) 24(AGCGTAGCCGCG,+,0.00) 115(GGGGCGCTTT,+,0.00) 87(GCGGACTGGCTG,+,0.00) 561_WT_peak_76 chr1 16678571 16679030 + 71 NA 5' UTR (NM_018994, exon 1 of 10) 5' UTR (NM_018994, exon 1 of 10) 148 NM_018994 54455 Hs.522384 NM_018994 ENSG00000037637 FBXO42 Fbx42|JFK F-box protein 42 protein-coding 0.122004 0.736957 -151(CGAGGACGGCGA,-,0.00) 4(AGAGGCCT,-,0.00),166(AGCCGCCA,-,0.00) -8(CCGGGGAGGAGG,-,0.00) 256(GGGCGGGCGCGG,-,0.00) 268(CGGACGCG,-,0.00) 53(TGGCGACG,-,0.00) -85(CGTCAGAC,+,0.00),265(CGGCGGAC,+,0.00) 241(AGCGCGCA,+,0.00),261(GGCGCGGC,-,0.00) -95(ACGGGGCCTGCG,+,0.00),190(CGCCGCCGCCGC,-,0.00),193(CGCCGCCGCCGC,-,0.00),253(CCGGGGCGGGCG,+,0.00) 161(CCCGGAGCCGCC,+,0.00) 561_WT_peak_683 chr1 203274201 203274370 + 71 NA promoter-TSS (NM_006763) promoter-TSS (NM_006763) 168 NR_034151 730227 Hs.293928 NR_034150 ENSG00000233791 LINC01136 - long intergenic non-protein coding RNA 1136 ncRNA 0.071006 0.623529 -24(AGCCGCCT,-,0.00) -54(CCGGGGCCTGCC,+,0.00) -110(CTTCTCGG,+,0.00) 561_WT_peak_5288 chr3 150481289 150481558 + 71 NA promoter-TSS (NM_005067) promoter-TSS (NM_005067) -160 NM_005067 6478 Hs.477959 NM_005067 HPRD:03737 SIAH2 hSiah2 siah E3 ubiquitin protein ligase 2 protein-coding 0.089219 0.651852 24(GGAGCAGGGCGA,-,0.00) -136(CGGACGCG,-,0.00) -86(AAAAACCG,+,0.00) -117(GCGGGGCGCGGG,+,0.00) -95(CTAGTCGG,+,0.00) 561_WT_peak_5142 chr3 61235773 61236025 + 71 NA intron (NM_001166243, intron 1 of 9) intron (NM_001166243, intron 1 of 9) 1234 NM_002012 2272 Hs.655995 NM_002012 HPRD:03096 FHIT AP3Aase|FRA3B fragile histidine triad protein-coding 0.067460 0.616601 -164(AAGCGGCT,+,0.00) -91(CGCCACGA,-,0.00) -71(GCCCGACG,-,0.00) -131(ACTTCGTCTCCC,-,0.00) -62(GAAACAAGAGGC,+,0.00) -25(GCGGCCAAGGCC,+,0.00) 561_WT_peak_7096 chr8 103250968 103251249 + 71 NA promoter-TSS (NM_001172477) promoter-TSS (NM_001172477) -49 NM_001172477 50484 Hs.512592 NM_015713 HPRD:05276 RRM2B MTDPS8A|MTDPS8B|P53R2 ribonucleotide reductase M2 B (TP53 inducible) protein-coding 0.096085 0.666667 -46(CTTTCCGGGTCG,-,0.00) 94(CTCGGCCGGC,-,0.00) 95(TCGGCCGG,-,0.00) 62(CGCTGGGTCCGC,-,0.00),97(GGCCGGCCCCGC,-,0.00) 107(GCCCCGCCGC,-,0.00) -65(CAGCCCGGCCGC,-,0.00) 561_WT_peak_6605 chr7 21378392 21378776 + 71 NA Intergenic Intergenic -89105 NM_003112 6671 Hs.88013 NM_003112 HPRD:02764 SP4 HF1B|SPR-1 Sp4 transcription factor protein-coding 0.010417 0.449351 201(CCGAGTAG,-,0.00) 561_WT_peak_5810 chr5 73875070 73875279 + 71 NA Intergenic Intergenic -60674 NM_001292004 3074 Hs.69293 NM_000521 HPRD:06043 HEXB ENC-1AS|HEL-248 hexosaminidase B (beta polypeptide) protein-coding 0.023923 0.500000 -137(GCTTCCGGGCCC,-,0.00) 38(AACCACTT,-,0.00) -140(CCGGCTTCCGGG,+,0.00) 561_WT_peak_19 chr1 1711856 1712038 + 71 NA promoter-TSS (NM_001198994) promoter-TSS (NM_001198994) -439 NM_001198994 65220 Hs.654792 NM_023018 HPRD:16907 NADK dJ283E3.1 NAD kinase protein-coding 0.010989 0.551913 -59(CAAAACCA,+,0.00) -8(GGCAGGCCCCGG,-,0.00) 561_WT_peak_4667 chr20 47894768 47894943 + 71 NA promoter-TSS (NR_036659) promoter-TSS (NR_036659) -99 NM_021035 57169 Hs.371794 NM_021035 HPRD:11142 ZNFX1 - zinc finger, NFX1-type containing 1 protein-coding 0.125714 0.767045 -157(CGAGGAGGGCGT,-,0.00) -129(GGCGGCGGAG,+,0.00) -134(CCCCCGGC,-,0.00) -4(CGGTTTGG,-,0.00) -103(GGCGCGGC,-,0.00) -125(GCGGAGCCGGCG,+,0.00) -128(GCGGCGGAGC,+,0.00) 561_WT_peak_6073 chr6 710790 710979 + 71 NA Intergenic CpG -17743 NM_018303 55770 Hs.484412 NM_018303 HPRD:11544 EXOC2 SEC5|SEC5L1|Sec5p exocyst complex component 2 protein-coding 0.074074 0.678947 0(CCGGCTTCCCGC,+,0.00) -120(CCGTCCGA,+,0.00) -74(AGGGCTGGGA,-,0.00) -73(GGGCTGGGAGGG,-,0.00) -118(GTCCGAGG,-,0.00) -19(TGCGCGCT,-,0.00) -6(GCGGGGCCGGCT,+,0.00) 14(CAGCCCGGCCGG,-,0.00) 561_WT_peak_3334 chr17 73030362 73030732 + 71 NA intron (NR_110835, intron 2 of 7) tRNA-Arg-AGG|tRNA|tRNA 1885 NR_110835 23510 Hs.514468 NM_015353 HPRD:17176 KCTD2 - potassium channel tetramerization domain containing 2 protein-coding 0.051351 0.609164 79(AGACGCTA,-,0.00) -4(TCGACACC,+,0.00) -39(CGGCACCA,-,0.00) 70(GGCGCGGT,-,0.00) 128(AACACGGCCC,-,0.00) 561_WT_peak_4599 chr20 31127764 31128030 + 71 NA intron (NM_001256798, intron 1 of 10) intron (NM_001256798, intron 1 of 10) 30135 NR_110619 101929698 Hs.638392 NR_110619 LOC101929698 - uncharacterized LOC101929698 ncRNA 0.015038 0.606742 -143(AGCCACTT,-,0.00) 561_WT_peak_6051 chr5 180230801 180231186 + 71 NA promoter-TSS (NM_001114620) promoter-TSS (NM_001114620) -91 NM_001114620 4245 Hs.519818 NM_002406 HPRD:01189 MGAT1 GLCNAC-TI|GLCT1|GLYT1|GNT-1|GNT-I|MGAT mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase protein-coding 0.046753 0.613990 60(TCGTGCAG,+,0.00) 132(CAAAACTG,+,0.00) 561_WT_peak_4621 chr20 35374642 35374834 + 71 NA promoter-TSS (NR_038370) promoter-TSS (NR_038370) -197 NM_022477 57446 Hs.437338 NM_022477 HPRD:12007 NDRG3 - NDRG family member 3 protein-coding 0.046875 0.554404 -84(TGGGCGGC,-,0.00) 561_WT_peak_5252 chr3 129830120 129830322 + 71 NA promoter-TSS (NR_024252) promoter-TSS (NR_024252) 55 NR_024252 729375 Hs.123633 NR_024252 FAM86HP - family with sequence similarity 86, member A pseudogene pseudo 0.103960 0.694581 -92(AGGCCTCT,+,0.00) -151(GCCGGGGG,+,0.00) -37(CGCCGCTA,+,0.00) -73(GCCGCCCA,+,0.00) -104(CGCAAGCCCCGC,-,0.00),-83(CGCTCGCCCCGC,-,0.00) 24(GGCGCCATGACG,+,0.00) -78(GCCCCGCCGC,-,0.00) 561_WT_peak_5594 chr4 129732348 129732681 + 71 NA promoter-TSS (NM_001287443) promoter-TSS (NM_001287443) 89 NM_001287442 79960 Hs.12420 NM_024900 HPRD:10151 JADE1 PHF17 jade family PHD finger 1 protein-coding 0.093093 0.700599 54(GGCGGCCGAG,+,0.00) -131(CCTCCTTCCCGC,+,0.00) -116(CCCCCGCC,-,0.00),67(GGCGGGGG,+,0.00) 109(CGGCACGT,-,0.00) 99(CGAGCCTCCGCG,-,0.00) 561_WT_peak_4281 chr2 120990105 120990278 + 71 NA Intergenic Intergenic -9207 NM_024121 79134 Hs.376722 NM_024121 TMEM185B FAM11B transmembrane protein 185B protein-coding 0.005780 0.396552 561_WT_peak_6881 chr7 148581567 148581846 + 71 NA promoter-TSS (NM_004456) promoter-TSS (NM_004456) -265 NM_001203248 2146 Hs.444082 NM_004456 HPRD:03342 EZH2 ENX-1|ENX1|EZH1|EZH2b|KMT6|KMT6A|WVS|WVS2 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding 0.161290 0.760714 -18(GGGCCCGGAGCC,+,0.00) -3(CGCGGACG,+,0.00) 32(CCGGCCGA,+,0.00) 96(GGCGGGGG,+,0.00) 44(CGGGACGA,-,0.00) -41(GCGGGGACCGGG,+,0.00) 65(CTTGGCGG,+,0.00) -110(GCGCCGCCGC,-,0.00) 561_WT_peak_3539 chr18 77748272 77748461 + 71 NA exon (NM_006701, exon 1 of 3) exon (NM_006701, exon 1 of 3) 166 NM_006701 10907 Hs.465498 NM_006701 HPRD:18252 TXNL4A DIB1|DIM1|HsT161|SNRNP15|TXNL4|U5-15kD thioredoxin-like 4A protein-coding 0.116402 0.710526 -132(AAGCGGAT,+,0.00) -29(TCGCCGCC,+,0.00) -24(GCCGCCCA,+,0.00) -49(CGACATGGCGGC,-,0.00),-21(GCCCAAGGCGGG,-,0.00) 561_WT_peak_4098 chr2 64262349 64262602 + 71 NA Intergenic Intergenic -16261 NM_016516 51542 Hs.48499 NM_016516 HPRD:10302 VPS54 HCC8|PPP1R164|SLP-8p|VPS54L|WR|hVps54L vacuolar protein sorting 54 homolog (S. cerevisiae) protein-coding 0.007905 0.338583 -117(AGCCGCAT,-,0.00) -130(CAAAACAG,+,0.00) 561_WT_peak_1036 chr10 71168733 71168942 + 71 NA intron (NM_001057, intron 2 of 4) CpG 7837 NM_001057 6865 Hs.88372 NM_001057 HPRD:01207 TACR2 NK2R|NKNAR|SKR|TAC2R tachykinin receptor 2 protein-coding 0.095694 0.704762 -105(CGGCAGGA,-,0.00) 561_WT_peak_5509 chr4 77997715 77997833 + 71 NA promoter-TSS (NM_006835) promoter-TSS (NM_006835) -649 NM_006835 10983 Hs.518827 NM_006835 HPRD:16690 CCNI CCNI1|CYC1|CYI cyclin I protein-coding 0.025424 0.420168 -136(CGGTTTTT,-,0.00) 561_WT_peak_1212 chr11 12246095 12246386 + 71 NA exon (NM_001282666, exon 11 of 19) exon (NM_001282666, exon 11 of 19) 61010 NR_106739 102466906 NR_106739 MIR6124 hsa-mir-6124 microRNA 6124 ncRNA 0.037801 0.640411 -104(GAGCGCCAGGGC,+,0.00) -126(AGCCATGGTGGC,-,0.00) 561_WT_peak_6922 chr7 158622530 158622810 + 71 NA promoter-TSS (NM_020728) promoter-TSS (NM_020728) -351 NM_020728 57488 Hs.490795 NM_020728 HPRD:13053 ESYT2 CHR2SYT|E-Syt2|FAM62B extended synaptotagmin-like protein 2 protein-coding 0.139286 0.729537 -134(AGGCGGCT,+,0.00) -11(CCGGGGTGGCGG,-,0.00) -148(GGCGTCGC,-,0.00) 80(TCGGACGG,-,0.00) -101(AGGCCCGGGA,-,0.00) 2(GGGATGAGAGGG,-,0.00),52(CGGGTGAGAGGG,-,0.00) 78(GGTCGGAC,+,0.00),79(GTCGGACG,-,0.00) -160(CGGTTTTG,-,0.00) -31(TGCGCGGC,-,0.00) -163(GGGCGGTTTT,+,0.00),11(GGGCGGCGTC,+,0.00),62(GGCGCCGCCC,-,0.00) -136(CGAGGCGG,+,0.00) 561_WT_peak_7443 chr9 131591771 131592071 + 71 NA intron (NM_016390, intron 1 of 11) CpG 179 NM_016390 51490 Hs.224137 NM_016390 HPRD:12935 C9orf114 CENP-32|HSPC109 chromosome 9 open reading frame 114 protein-coding 0.110000 0.737542 -23(GCGGGAAGCAGG,-,0.00) 106(TCCTGCCG,+,0.00) -116(GGGAGCCGCAGG,+,0.00) -19(GAAGCAGGCAGC,+,0.00) -3(GGCGCGGC,-,0.00) -3(GGCGCGGCCC,-,0.00) 0(GCGGCCCGGCCC,+,0.00) 561_WT_peak_4412 chr2 196997113 196997344 + 71 NA Intergenic LTR19C|LTR|ERV1 39108 NM_004226 9262 Hs.88297 NM_004226 HPRD:05289 STK17B DRAK2 serine/threonine kinase 17b protein-coding 0.004329 0.469828 -102(GGGGTAAA,+,0.00),-16(CAGGTAAA,+,0.00) 561_WT_peak_3350 chr17 74188109 74188445 + 71 NA intron (NM_052916, intron 2 of 18) intron (NM_052916, intron 2 of 18) 48113 NM_052916 114804 Hs.500643 NM_052916 HPRD:15259 RNF157 - ring finger protein 157 protein-coding 0.011905 0.373887 -143(CAAAACCA,+,0.00) 561_WT_peak_3230 chr17 46914917 46915102 + 71 NA intron (NM_001261395, intron 1 of 11) AluSx3|SINE|Alu 6659 NM_001261393 10241 Hs.514920 NM_005831 HPRD:06846 CALCOCO2 NDP52 calcium binding and coiled-coil domain 2 protein-coding 0.016216 0.440860 -28(ATGTGGCT,+,0.00) 561_WT_peak_841 chr10 181123 181293 + 71 NA promoter-TSS (NM_001202464) promoter-TSS (NM_001202464) -216 NM_001202464 10771 Hs.292265 NM_006624 HPRD:09830 ZMYND11 BRAM1|BS69 zinc finger, MYND-type containing 11 protein-coding 0.152941 0.736842 -94(CCCGGCCGCC,-,0.00) -127(GTGCCCTCCCGG,+,0.00) -106(CGCACGCG,-,0.00) -121(TCCCGGCCCT,+,0.00) -124(CCCTCCCGGCCC,+,0.00) -89(CCGCCTAG,-,0.00) 561_WT_peak_425 chr1 144078636 144078971 + 71 NA Intergenic Intergenic -68008 NM_001278267 100288142 Hs.445080 NM_001278267 ENSG00000203832 NBPF20 - neuroblastoma breakpoint family, member 20 protein-coding 0.005970 0.377976 -9(TTTACCAG,-,0.00) 561_WT_peak_3059 chr17 18086253 18086449 + 71 NA promoter-TSS (NM_017758) promoter-TSS (NM_017758) -516 NM_017758 54890 Hs.744130 NM_017758 HPRD:08621 ALKBH5 ABH5|OFOXD|OFOXD1 AlkB family member 5, RNA demethylase protein-coding 0.122449 0.695431 -79(TCGACGCC,+,0.00) -6(GCGGCGGCAGCG,+,0.00) 561_WT_peak_4583 chr20 24929606 24929807 + 71 NA promoter-TSS (NM_003650) promoter-TSS (NM_003650) -160 NM_003650 8530 Hs.143212 NM_003650 HPRD:04458 CST7 CMAP cystatin F (leukocystatin) protein-coding 0.024876 0.514851 -57(AAGCGGTT,+,0.00) 561_WT_peak_225 chr1 46216281 46216575 + 71 NA promoter-TSS (NM_005897) promoter-TSS (NM_005897) 57 NM_001145349 3652 Hs.744252 NM_005897 HPRD:00940 IPP KLHL27 intracisternal A particle-promoted polypeptide protein-coding 0.108844 0.711864 24(CGCGTGCG,+,0.00),26(CGTGCGCG,-,0.00) -103(GGCGGGGG,+,0.00),-89(GGCGGGGG,+,0.00),-29(GCCGGGCG,+,0.00) -151(CCCGCTCAGGCC,+,0.00),-113(GGCCGGAGAGGG,-,0.00) -10(CTTCGGAC,+,0.00) -160(CCTCCGGCGCCC,-,0.00) 3(GCGGGCCCTGGG,+,0.00),62(CGCTGGCGCCTC,-,0.00) -134(CGCGCAGTCGCG,+,0.00) -78(CGAGGCGG,+,0.00),-1(CTTCGCGG,+,0.00) 561_WT_peak_2767 chr16 29757320 29757803 + 71 NA promoter-TSS (NM_175900) promoter-TSS (NM_175900) -221 NM_175900 283897 Hs.331095 NM_175900 HPRD:08183 C16orf54 - chromosome 16 open reading frame 54 protein-coding 0.035197 0.582645 283(GGCGGCTGAG,+,0.00) 282(AGGCGGCT,+,0.00) 92(GAAAGAGGACGC,+,0.00) 103(CCGGGGCCAGGC,+,0.00) 561_WT_peak_3767 chr19 40596854 40597034 + 70 NA promoter-TSS (NM_001142578) promoter-TSS (NM_001142578) -99 NM_001142579 284323 Hs.115140 NM_001010880 HPRD:17336 ZNF780A ZNF780 zinc finger protein 780A protein-coding 0.044444 0.591160 561_WT_peak_4607 chr20 33292198 33292429 + 70 NA 5' UTR (NM_021202, exon 1 of 5) 5' UTR (NM_021202, exon 1 of 5) 165 NM_021202 58476 Hs.516994 NM_021202 HPRD:15546 TP53INP2 C20orf110|DOR|PINH|dJ1181N3.1 tumor protein p53 inducible nuclear protein 2 protein-coding 0.147186 0.814655 -66(CCGCCCCCCTCC,+,0.00) -158(CCGCCTCCCCCG,+,0.00),-63(CCCCCCTCCCGC,+,0.00) -77(TCAACGCC,+,0.00) 18(GCCCGGGCCT,+,0.00) -71(CCGTGCCG,+,0.00) 49(CGCCGGGGCCGC,-,0.00) 54(GGGCCGCGTT,+,0.00) 47(GCCGCCGGGGCC,+,0.00) -164(GCCCCGCCGC,-,0.00),-96(GCCCCGCCGC,-,0.00) -132(GCGGCCCGGCCT,+,0.00) 561_WT_peak_2190 chr14 50100974 50101208 + 70 NA exon (NM_018139, exon 1 of 3) exon (NM_018139, exon 1 of 3) 857 NM_018139 55172 Hs.231761 NM_018139 HPRD:12627 DNAAF2 C14orf104|CILD10|KTU|PF13 dynein, axonemal, assembly factor 2 protein-coding 0.094017 0.714894 -6(AGGCCGCT,+,0.00) -25(TCGGTGGG,-,0.00) -34(TAGCGAGG,-,0.00) 19(CCGGGGCCCGGG,+,0.00) -12(GCTGCAAGGC,+,0.00) -11(CTGCAAGGCCGC,-,0.00) 561_WT_peak_5405 chr4 6642370 6642585 + 70 NA 5' UTR (NM_033296, exon 1 of 2) 5' UTR (NM_033296, exon 1 of 2) 659 NM_033296 93621 Hs.406590 NM_033296 HPRD:17589 MRFAP1 PAM14|PGR1 Morf4 family associated protein 1 protein-coding 0.083721 0.527778 -96(AAGTCGCT,+,0.00),-95(AGTCGCTT,-,0.00) -101(CGCGTAAG,+,0.00) 22(CATCGCTA,+,0.00) 1(CGGTTTTC,-,0.00) -54(AGGGTAAA,+,0.00) 561_WT_peak_410 chr1 118198765 118198880 + 70 NA Intergenic MIR|SINE|MIR 50218 NM_017709 54855 Hs.356216 NM_017709 HPRD:13312 FAM46C - family with sequence similarity 46, member C protein-coding 0.008696 0.594828 561_WT_peak_4511 chr2 235399724 235399981 + 70 NA Intergenic Intergenic 5841 NM_005737 10123 Hs.111554 NM_005737 HPRD:11988 ARL4C ARL7|LAK ADP-ribosylation factor-like 4C protein-coding 0.015564 0.403101 -96(AGCGGCTT,-,0.00) 84(GGGTTTTG,-,0.00) 561_WT_peak_2634 chr15 102192377 102192689 + 70 NA promoter-TSS (NM_078474) promoter-TSS (NM_078474) 61 NM_078474 80213 Hs.288912 NM_025141 HPRD:16554 TM2D3 BLP2 TM2 domain containing 3 protein-coding 0.128205 0.738019 -141(CCGGCCTCCTCG,+,0.00) 41(ACTTCCGGGCCG,-,0.00) -65(CCGCCCGA,+,0.00),-61(CCGACAGA,+,0.00) 49(GCCGGGGG,+,0.00) -110(GCCACTCAGCCC,+,0.00) 70(GGGAGCCGGAGC,+,0.00) 57(GCGGGGCGCGCC,+,0.00),134(CGCTGTCCTCGC,-,0.00) 561_WT_peak_872 chr10 6707930 6708174 + 70 NA Intergenic Intergenic 47374 NR_120634 101928150 Hs.576825 NR_120634 LOC101928150 - uncharacterized LOC101928150 ncRNA 0.016393 0.444898 -73(CGGTTCTG,-,0.00) 561_WT_peak_6273 chr6 31367500 31367712 + 70 NA promoter-TSS (NM_001289154).3 promoter-TSS (NM_001289154).3 45 NM_001289153 100507436 Hs.130838 NM_000247 ENSG00000204520 MICA MIC-A|PERB11.1 MHC class I polypeptide-related sequence A protein-coding 0.056604 0.582160 -14(AGAGGCTT,-,0.00),35(AGCCGGTT,-,0.00) -146(CGCTGTCACCGC,-,0.00) -154(CGAGGCGG,+,0.00) -127(GCGCCGCAGC,-,0.00),28(GCGGCGCAGC,+,0.00),28(GCGGCGCAGC,-,0.00) 561_WT_peak_3941 chr19 59086737 59086922 + 70 NA promoter-TSS (NR_026052) promoter-TSS (NR_026052) 63 NR_026052 65996 Hs.541177 NM_023939 HPRD:14527 CENPBD1P1 - CENPBD1 pseudogene 1 pseudo 0.118919 0.747312 -46(TCGGCGTCCTCC,+,0.00) -69(CGCGGCCGAG,+,0.00) -163(CCGGGACGCCGG,-,0.00),-76(CCCCCTTCGCGG,+,0.00) 9(CCCCGCCAGCCC,+,0.00) -129(AGGGGCGGGC,-,0.00),-105(TCCCTGCCCG,+,0.00) -156(GCCGGGCG,+,0.00) -136(CGTCGCAA,+,0.00),-93(CGTCGCCA,+,0.00) -72(CTTCGCGG,+,0.00) 561_WT_peak_5163 chr3 88198973 88199279 + 70 NA promoter-TSS (NM_001195308) promoter-TSS (NM_001195308) -110 NM_001195308 8545 Hs.444818 NM_003663 HPRD:04529 CGGBP1 CGGBP|p20-CGGBP CGG triplet repeat binding protein 1 protein-coding 0.062092 0.589577 -155(CGTGGGAC,+,0.00) 4(GCGGGCCCAGTG,+,0.00) 561_WT_peak_5625 chr4 154387603 154387783 + 70 NA intron (NM_015196, intron 1 of 34) CpG 195 NM_015196 23240 Hs.732450 NM_015196 HPRD:13823 KIAA0922 TMEM131L KIAA0922 protein-coding 0.055556 0.646409 -80(CGCTGGGCTCGC,-,0.00),-56(CCCCGCCCCCGC,-,0.00) 561_WT_peak_3332 chr17 72869427 72869571 + 70 NA promoter-TSS (NM_001258012) promoter-TSS (NM_001258012) -343 NR_047576 2232 Hs.69745 NM_004110 HPRD:00060 FDXR ADXR ferredoxin reductase protein-coding 0.090278 0.565517 -115(CGTCGCTC,+,0.00) -139(GCCGCGCC,+,0.00) 561_WT_peak_5828 chr5 78809550 78809780 + 70 NA promoter-TSS (NM_004272) promoter-TSS (NM_004272) -6 NM_001277078 9456 Hs.591761 NM_004272 HOMER1 HOMER|HOMER1A|HOMER1B|HOMER1C|SYN47|Ves-1 homer homolog 1 (Drosophila) protein-coding 0.126087 0.761905 -41(TCGAAGCC,+,0.00) -101(GGGCGCCTGCCC,+,0.00) -119(AGGGGCCGAAGG,+,0.00) 51(CCCGGGCCCCGC,-,0.00) 28(CCGCCACG,-,0.00) -88(AGCCAAGGCGGG,-,0.00) 22(GCGCCGCCGC,-,0.00),56(GCCCCGCCGC,-,0.00) 561_WT_peak_6049 chr5 179285627 179285960 + 70 NA promoter-TSS (NM_016175) promoter-TSS (NM_016175) 47 NM_001017987 51149 Hs.741169 NM_016175 HPRD:17420 C5orf45 - chromosome 5 open reading frame 45 protein-coding 0.120120 0.718563 -93(GGAGGAGGAGGA,-,0.00),-90(GGAGGAGGAGGG,-,0.00),-87(GGAGGAGGGGGC,-,0.00) -4(GCGACGCC,+,0.00) -79(GGGCTGGCACCC,-,0.00) 36(CGCGTGCG,+,0.00),76(CGCACGCG,-,0.00) -6(AAGCGACG,-,0.00) -108(CGCTGTCCCCGC,-,0.00),60(CCGCGGCCCCGC,-,0.00),144(CCGCGGCCCCGC,-,0.00) 61(CGCGGCCCCGCC,-,0.00),145(CGCGGCCCCGCC,-,0.00) 140(GCCGCCGCGGCC,+,0.00) 561_WT_peak_1857 chr12 111127438 111127630 + 70 NA promoter-TSS (NM_032369) promoter-TSS (NM_032369) 83 NM_001256413 84329 Hs.211511 NM_032369 HPRD:17507 HVCN1 HV1|VSOP hydrogen voltage-gated channel 1 protein-coding 0.052083 0.663212 -50(CTGGGCCGCC,-,0.00) -26(CTCGTACG,+,0.00) 11(TCCCTCCCCT,+,0.00) -151(ACCTCTCAGCCC,+,0.00) -8(CGCAGGCCCAGC,-,0.00) -48(GGGCCGCCTT,+,0.00) 561_WT_peak_629 chr1 173991264 173991493 + 70 NA Intergenic CpG -29168 NM_001300850 149041 Hs.30258 NM_172071 HPRD:13913 RC3H1 RNF198|ROQUIN ring finger and CCCH-type domains 1 protein-coding 0.122271 0.747826 17(TCGGCCTCCTCT,+,0.00),38(TCGTCCTCCGCC,+,0.00) -82(GCCGCCGGGCCA,-,0.00) 16(CTCGGCCTCC,-,0.00),43(CTCCGCCGCC,-,0.00) -155(CCCGCGGC,-,0.00) -147(CGTCGCCA,+,0.00) 47(GCCGCCCA,+,0.00) -126(CGCCGCCGCCGC,-,0.00) -119(GCCGCCGAGGCC,+,0.00),-75(GGCCACGGCTGC,-,0.00) 561_WT_peak_3337 chr17 73178826 73179143 + 70 NA 5' UTR (NM_006937, exon 1 of 4) 5' UTR (NM_006937, exon 1 of 4) 114 NM_001005849 6613 Hs.380973 NM_006937 HPRD:04332 SUMO2 HSMT3|SMT3B|SMT3H2|SUMO3|Smt3A small ubiquitin-like modifier 2 protein-coding 0.123028 0.716981 -56(AGCGCCGGAGTC,+,0.00) -95(GGCGGCGA,-,0.00) 69(CGCGCACG,+,0.00),102(CGTGCGCG,-,0.00) -70(CGTCGGCC,+,0.00) -111(GCGAGGCGAAGG,+,0.00) -134(CGCGCCATGACC,+,0.00),-68(TCGGCCATGGCG,+,0.00),-66(GGCCATGGCGAG,-,0.00) -114(GCGGCGAGGC,+,0.00) 561_WT_peak_1726 chr12 56546088 56546386 + 70 NA promoter-TSS (NM_002475) promoter-TSS (NM_002475) 33 NM_001199629 140465 Hs.632731 NM_002475 HPRD:14721 MYL6B MLC1SA myosin, light chain 6B, alkali, smooth muscle and non-muscle protein-coding 0.083893 0.638796 -11(TGGGCCGGAAGC,+,0.00) 112(GGGCCGCGCT,+,0.00) -18(ACCGCCATGGGC,+,0.00) 76(GCTCCGCGGC,-,0.00) 561_WT_peak_5082 chr3 44903118 44903318 + 70 NA promoter-TSS (NM_144638) promoter-TSS (NM_144638) -162 NR_030290 693149 NR_030290 MIR564 MIRN564|hsa-mir-564 microRNA 564 ncRNA 0.080000 0.676617 18(GGGGCCTGCCGG,+,0.00) 561_WT_peak_3165 chr17 38210709 38210891 + 70 NA promoter-TSS (NM_001079518) promoter-TSS (NM_001079518) 89 NR_052017 9862 Hs.462983 NM_014815 HPRD:06107 MED24 ARC100|CRSP100|CRSP4|DRIP100|THRAP4|TRAP100 mediator complex subunit 24 protein-coding 0.054945 0.551913 -66(CTAGTCGG,+,0.00) 561_WT_peak_743 chr1 224301820 224302125 + 70 NA exon (NM_001136115, exon 1 of 4) exon (NM_001136115, exon 1 of 4) 183 NM_015176 23219 Hs.64691 NM_015176 HPRD:12367 FBXO28 CENP-30|Fbx28 F-box protein 28 protein-coding 0.091803 0.679739 -80(GCCTCCGGCTCT,-,0.00) -110(GGCGGCCAAG,+,0.00) -13(CGCTCCCAGCCC,+,0.00) 84(GTCCTACG,-,0.00) 2(CGCTGGCTCCGG,-,0.00) -109(GCGGCCAAGGCG,+,0.00),-107(GGCCAAGGCGAC,-,0.00) 561_WT_peak_1350 chr11 65189627 65189821 + 70 NA promoter-TSS (NR_028272) promoter-TSS (NR_028272) -545 NR_028272 283131 Hs.523789 NR_002802 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA 0.144330 0.748718 -101(CTGGGCCGCC,-,0.00),19(CTCCGCCGCC,-,0.00) -34(CCGCCCGA,+,0.00) -125(CCCTCGCAGCAC,+,0.00) -48(CCGACTCG,-,0.00),-47(CGACTCGG,+,0.00) -145(GGTGCGGAGC,+,0.00),-125(CCCTCGCAGC,-,0.00) 561_WT_peak_985 chr10 46222410 46222580 + 70 NA promoter-TSS (NM_001169107) promoter-TSS (NM_001169107) -153 NM_001169106 253725 Hs.365286 NM_015262 HPRD:11094 FAM21C FAM21A|VPEF family with sequence similarity 21, member C protein-coding 0.094118 0.713450 -91(CCCCCGCC,-,0.00) -41(CAGCTTCCTCCG,-,0.00) -104(TGGGCGGC,-,0.00) 561_WT_peak_3912 chr19 57791901 57792244 + 70 NA 5' UTR (NM_006635, exon 1 of 3) 5' UTR (NM_006635, exon 1 of 3) 219 NM_006635 10794 Hs.99971 NM_006635 HPRD:06885 ZNF460 HZF8|ZNF272 zinc finger protein 460 protein-coding 0.107872 0.677326 -147(AAGCGGTT,+,0.00) 105(CCGGGATGGCGG,-,0.00) 118(GGCGTGGA,-,0.00) -102(CCGCTTCTCCCC,-,0.00) -122(CTTGGCGG,+,0.00) -53(CCTCCGCAGC,-,0.00) 116(GCGGCGTGGATG,+,0.00),156(TCGGCCTTGCTG,+,0.00) 561_WT_peak_6603 chr7 19748388 19748774 + 70 NA promoter-TSS (NM_001002926) promoter-TSS (NM_001002926) 79 NM_001002926 221830 Hs.353035 NM_001002926 HPRD:16311 TWISTNB - TWIST neighbor protein-coding 0.090674 0.620155 -20(AGCGGCAT,-,0.00) -157(TAGCGAAG,-,0.00),-46(TAGCGACT,-,0.00) 52(CGCTGGCCGCGG,-,0.00) 561_WT_peak_5580 chr4 114276821 114277038 + 70 NA exon (NM_001148, exon 38 of 46) exon (NM_001148, exon 38 of 46) 203491 NR_107049 102465878 NR_107049 MIR8082 hsa-mir-8082 microRNA 8082 ncRNA 0.023041 0.490826 -92(AGCCACCT,-,0.00) 40(TAGCGAAG,-,0.00) -21(CAAAACCT,+,0.00) 561_WT_peak_2002 chr13 41350962 41351142 + 70 NA Intergenic Intergenic -5705 NM_005830 10240 Hs.596607 NM_005830 HPRD:10098 MRPS31 IMOGN38|MRP-S31|S31mt mitochondrial ribosomal protein S31 protein-coding 0.038889 0.480663 -73(AAGTGGTT,+,0.00) -154(CAAAACCG,+,0.00) 561_WT_peak_2151 chr14 24740727 24740998 + 70 NA promoter-TSS (NM_182836) promoter-TSS (NM_182836) -29 NM_004581 5875 Hs.377992 NM_004581 HPRD:03547 RABGGTA PTAR3 Rab geranylgeranyltransferase, alpha subunit protein-coding 0.110701 0.665441 -55(CGGCTCGGAGGC,+,0.00) 7(AGCCACCT,-,0.00) -44(CGCGTGCG,+,0.00),-42(CGTGCGCG,-,0.00) -65(CGGAAGAGGCCG,+,0.00) -40(TGCGCGGG,-,0.00) -164(GCGGCGCCCGCC,+,0.00) -52(CTCGGAGGCGCG,+,0.00) 561_WT_peak_1842 chr12 108956257 108956593 + 70 NA exon (NM_001301140, exon 1 of 6) exon (NM_001301140, exon 1 of 6) 1186 NM_001301141 23479 Hs.615131 NM_014301 HPRD:14828 ISCU 2310020H20Rik|HML|ISU2|NIFU|NIFUN|hnifU iron-sulfur cluster assembly enzyme protein-coding 0.133929 0.727003 149(GGCGGCCGCG,+,0.00) 40(CCGCCTGCCCGC,+,0.00) -60(GGCGTCGC,-,0.00) -15(CGGCTGGGGCTT,-,0.00) -163(CGGACGCG,-,0.00) 37(CCCCCGCC,-,0.00),153(GCCGCGGG,+,0.00) -29(CGGCAAGA,-,0.00),69(CGGCCCGA,-,0.00) -58(CGTCGCTC,+,0.00) 165(TGCGCAGC,-,0.00) -87(CCGACTCG,-,0.00) 28(GCTGCGGAGC,+,0.00) 561_WT_peak_3150 chr17 37025486 37025774 + 70 NA promoter-TSS (NM_006148) promoter-TSS (NM_006148) -482 NR_073384 3927 Hs.741156 NM_006148 HPRD:04229 LASP1 Lasp-1|MLN50 LIM and SH3 protein 1 protein-coding 0.034722 0.539792 -14(AGGCGGCT,+,0.00) -95(CGGATTTG,-,0.00) 561_WT_peak_2095 chr13 110790541 110790734 + 70 NA Intergenic CpG 168859 NM_001845 1282 Hs.17441 NM_001845 HPRD:00359 COL4A1 HANAC|ICH|POREN1|arresten collagen, type IV, alpha 1 protein-coding 0.119171 0.695876 -143(GCCGCGCC,+,0.00) -89(CGGGGAGCCGAG,+,0.00) -125(CGAGGCGG,+,0.00) 561_WT_peak_5104 chr3 49059323 49059598 + 70 NA promoter-TSS (NM_018114) promoter-TSS (NM_018114) 386 NM_199070 25915 Hs.31387 NM_199069 NDUFAF3 2P1|C3orf60|E3-3 NADH dehydrogenase (ubiquinone) complex I, assembly factor 3 protein-coding 0.105455 0.724638 -75(CTCGGCCTCC,-,0.00) -125(CGGGGAGGGCGG,-,0.00) -128(GGGCGGGGAGGG,-,0.00),33(CCCTCCCAACCC,+,0.00) -126(GCGGGGAGGGCG,+,0.00) -77(AACTCGGCCT,-,0.00) 85(TCAGCCATGGCC,+,0.00),87(AGCCATGGCCAC,-,0.00) 22(GCTCCGCAGG,-,0.00) 561_WT_peak_1190 chr11 3875871 3876063 + 70 NA promoter-TSS (NM_003156) promoter-TSS (NM_003156) -966 NM_001277962 6786 Hs.501735 NM_003156 HPRD:05803 STIM1 D11S4896E|GOK|IMD10|STRMK|TAM|TAM1 stromal interaction molecule 1 protein-coding 0.015625 0.575130 -108(CCCACCGA,+,0.00) -89(GGGCTGAGAGCT,-,0.00),-58(GGGCTGTGAGAG,-,0.00) 561_WT_peak_3163 chr17 38024239 38024514 + 70 NA promoter-TSS (NM_199321) promoter-TSS (NM_199321) -79 NM_198844 124626 Hs.367245 NM_198844 HPRD:18365 ZPBP2 ZPBPL zona pellucida binding protein 2 protein-coding 0.152727 0.688406 -72(CGGACGCG,-,0.00),37(CGCACGCG,-,0.00),53(CGCGTCCG,+,0.00) 70(TTGCGACG,-,0.00) -75(CGCCGGAC,+,0.00),73(CGACGGAC,+,0.00) -86(CGGGAAAA,+,0.00) -123(CCTTCCGCTCCG,-,0.00) 8(CCCCGCCCCCGC,-,0.00) 561_WT_peak_7227 chr9 21031091 21031157 + 70 NA intron (NM_001010915, intron 1 of 6) MER5A|DNA|hAT-Charlie 511 NM_001010915 401494 Hs.716678 NM_001010915 PTPLAD2 HACD4 protein tyrosine phosphatase-like A domain containing 2 protein-coding 0.045455 0.552239 561_WT_peak_5461 chr4 48782603 48782792 + 70 NA promoter-TSS (NM_015030) promoter-TSS (NM_015030) -381 NM_015030 285527 Hs.595553 NM_015030 ENSG00000075539 FRYL KIAA0826 FRY-like protein-coding 0.031746 0.442105 -66(AGCGACTT,-,0.00) -40(GGGGTCGA,-,0.00) 561_WT_peak_2188 chr14 50065556 50065880 + 70 NA non-coding (NR_037793, exon 1 of 5) non-coding (NR_037793, exon 1 of 5) 303 NR_037792 122769 Hs.451090 NM_152329 HPRD:15164 LRR1 4-1BBLRR|LRR-1|PPIL5 leucine rich repeat protein 1 protein-coding 0.086420 0.652308 138(GCCGCCGGTCCG,-,0.00) 91(GGCGTCCGAG,+,0.00) -162(AAGCCGTT,+,0.00),-161(AGCCGTTT,-,0.00) -36(GCGGGAAGGAGG,-,0.00) -71(CGCGTGCG,+,0.00),-69(CGTGCGCG,-,0.00) -117(CCGAGTCG,-,0.00) -56(CCCGATGGCGGC,-,0.00),61(CCCGCCTTGGGG,+,0.00) 561_WT_peak_4343 chr2 158755703 158755879 + 70 NA Intergenic Intergenic -23417 NM_001111067 90 Hs.470316 NM_001105 HPRD:00021 ACVR1 ACTRI|ACVR1A|ACVRLK2|ALK2|FOP|SKR1|TSRI activin A receptor, type I protein-coding 0.011364 0.440678 561_WT_peak_5819 chr5 75838813 75838973 + 70 NA intron (NM_006633, intron 2 of 35) intron (NM_006633, intron 2 of 35) -4341 NM_001285460 10788 Hs.291030 NM_006633 HPRD:09253 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding 0.012500 0.434783 561_WT_peak_1086 chr10 89623350 89623543 + 70 NA promoter-TSS (NM_001126049) promoter-TSS (NM_001126049) 251 NM_000314 5728 Hs.500466 NM_000314 PTEN 10q23del|BZS|CWS1|DEC|GLM2|MHAM|MMAC1|PTEN1|TEP1 phosphatase and tensin homolog protein-coding 0.119171 0.711340 -28(CGGCCCGGAGCC,+,0.00) -36(GGCGGCCGCG,+,0.00) 4(GCCGCGGG,+,0.00) -17(CCCTCTCAGCGC,+,0.00) 7(GCGGGGGCAGCG,+,0.00) -153(GCTGGGACGC,+,0.00) 561_WT_peak_6579 chr7 5436619 5437144 + 70 NA intron (NM_001080495, intron 2 of 29) intron (NM_001080495, intron 2 of 29) 26296 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding 0.049524 0.707224 248(AGGCCCGGATGC,+,0.00) 156(AGCCGCCA,-,0.00) -48(CAGGCCCAGCCC,+,0.00) 169(TCCTGCCG,+,0.00) -11(CTCGGGCCCCGG,-,0.00) 228(AAACCCGCCC,-,0.00) -52(CAGCCAGGCCCA,-,0.00),243(CACCCAGGCCCG,-,0.00) 561_WT_peak_5612 chr4 147096937 147097123 + 70 NA intron (NM_007080, intron 1 of 3) CpG 195 NM_007080 11157 Hs.190520 NM_007080 HPRD:06286 LSM6 YDR378C LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) protein-coding 0.123656 0.759358 -20(AGCCCCGGAAAG,+,0.00) 6(AGGCTGGGGCTC,-,0.00) -104(GCCGGGCG,+,0.00),-32(GCCGGGCG,+,0.00) -117(GGCCGACG,-,0.00) -123(TGCGCGGG,-,0.00) -62(GCTGTGGAGC,+,0.00) 561_WT_peak_5207 chr3 112709613 112710051 + 70 NA promoter-TSS (NM_014170) promoter-TSS (NM_014170) 32 NM_138485 29083 Hs.127496 NM_014170 HPRD:13700 GTPBP8 HSPC135 GTP-binding protein 8 (putative) protein-coding 0.073059 0.610478 -91(CCACCCTCCTCC,+,0.00) 139(AGCCGCTA,-,0.00) -13(GGCGTCGC,-,0.00) 82(GGGCTGCGGCTG,-,0.00) 10(CGCACGCG,-,0.00) -52(CGGAACGA,-,0.00) 212(TGTACCCG,-,0.00) -81(CCCGCGCA,+,0.00) -44(GCGAGGCCAGAG,+,0.00),73(GCGGCGCCCGGG,+,0.00) -11(CGTCGCGG,+,0.00) -12(GCGTCGCGGC,-,0.00) 76(GCGCCCGGGCTG,+,0.00) 561_WT_peak_1748 chr12 62860463 62860735 + 70 NA promoter-TSS (NM_015026) promoter-TSS (NM_015026) 2 NM_001278469 23041 Hs.389378 NM_015026 HPRD:11123 MON2 - MON2 homolog (S. cerevisiae) protein-coding 0.110294 0.736264 -158(CCGCCTGCCCCG,+,0.00) -9(GGCGTCGG,-,0.00) -137(AAGCCCCAGCCC,+,0.00),18(GAGCTGGCGCTG,-,0.00) 74(CCCGCGGC,-,0.00) -130(AGCCCCGCCC,-,0.00) -22(CGACTCGG,+,0.00) 72(GCCCCGCGGC,-,0.00) 561_WT_peak_6353 chr6 53516215 53516319 + 70 NA 3' UTR (NM_001003760, exon 3 of 3) 3' UTR (NM_001003760, exon 3 of 3) 14239 NM_001003760 401265 Hs.131064 NM_001003760 HPRD:13923 KLHL31 BKLHD6|KBTBD1|KLHL|bA345L23.2 kelch-like family member 31 protein-coding 0.009615 0.323810 561_WT_peak_2358 chr14 99947785 99948043 + 70 NA promoter-TSS (NM_199123) promoter-TSS (NM_199123) 175 NM_001099402 8812 Hs.510409 NM_003858 CCNK CPR4 cyclin K protein-coding 0.096899 0.671815 -104(CCGCCCACCTCC,+,0.00) -124(CCCACCGA,+,0.00),-120(CCGACTGA,+,0.00) -162(CGTCGCTG,+,0.00),-57(CGCCGCTA,+,0.00) -105(GCCGCCCA,+,0.00) -108(AGCGCCGCCC,-,0.00) 24(CGACGCGG,+,0.00) -153(GGGGCTTGCCTG,+,0.00) 561_WT_peak_28 chr1 2509791 2510110 + 70 NA intron (NR_121638, intron 1 of 3) intron (NR_121638, intron 1 of 3) -7949 NR_036637 127281 Hs.462033 NM_152371 HPRD:14513 FAM213B C1orf93 family with sequence similarity 213, member B protein-coding 0.034483 0.628125 108(ACCCCTGGCGGC,-,0.00) 561_WT_peak_5309 chr3 161028651 161028848 + 70 NA Intergenic L2b|LINE|L2 61122 NM_001040100 165679 Hs.369104 NM_145035 SPTSSB ADMP|C3orf57|SSSPTB serine palmitoyltransferase, small subunit B protein-coding 0.005076 0.464646 -127(AGGTGGCT,+,0.00) 561_WT_peak_4013 chr2 30369095 30369329 + 70 NA promoter-TSS (NM_001127400) promoter-TSS (NM_001127400) -538 NM_001127400 51646 Hs.515890 NM_016061 HPRD:18312 YPEL5 - yippee-like 5 (Drosophila) protein-coding 0.038462 0.480851 -46(CGGGGAAA,+,0.00) 561_WT_peak_4074 chr2 55460083 55460340 + 70 NA promoter-TSS (NM_152385) promoter-TSS (NM_152385) 397 NM_001177413 6233 Hs.311640 NM_002954 HPRD:01878 RPS27A CEP80|HEL112|S27A|UBA80|UBC|UBCEP1|UBCEP80 ribosomal protein S27a protein-coding 0.062257 0.565891 72(GGGAGATGAAGG,+,0.00) 561_WT_peak_4487 chr2 231454317 231454545 + 70 NA Intergenic Intergenic 110813 NR_040038 151475 Hs.528154 NR_040038 ENSG00000226125 LOC151475 - uncharacterized LOC151475 ncRNA 0.008772 0.454148 561_WT_peak_4095 chr2 64068529 64068761 + 70 NA promoter-TSS (NM_006759) promoter-TSS (NM_006759) -369 NM_006759 7360 Hs.516217 NM_006759 HPRD:08934 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding 0.090517 0.682403 -21(GCGGGAAGGCGG,-,0.00) -61(CCTACCGA,+,0.00),3(CCGACCGG,+,0.00),7(CCGGTCGG,-,0.00) -70(CCTTCGGCCCCT,-,0.00) -25(CGAGGCGG,+,0.00) -93(GCTGCGGGGG,+,0.00) 561_WT_peak_3106 chr17 28705390 28705561 + 70 NA promoter-TSS (NM_001304) promoter-TSS (NM_001304) -467 NM_001304 1362 Hs.446079 NM_001304 HPRD:04375 CPD GP180 carboxypeptidase D protein-coding 0.087719 0.552326 -142(CGCACGCG,-,0.00) -58(CCGAACGA,+,0.00) 561_WT_peak_7492 chrX 1511330 1511643 + 70 NA promoter-TSS (NM_001636) promoter-TSS (NM_001636) -447 NM_001636 293 Hs.350927 NM_001636 SLC25A6 2|3|AAC3|ANT|ANT 2|ANT 3|ANT3|ANT3Y solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 protein-coding 0.134185 0.745223 103(GGCGCGGC,-,0.00) 129(CGTGACTCCGCG,-,0.00) 561_WT_peak_1218 chr11 14541769 14542199 + 70 NA promoter-TSS (NM_001143937) promoter-TSS (NM_001143937) 7 NM_002786 5682 Hs.102798 NM_002786 HPRD:04170 PSMA1 HC2|HEL-S-275|NU|PROS30 proteasome (prosome, macropain) subunit, alpha type, 1 protein-coding 0.074419 0.607889 171(GGCGGCTGAG,+,0.00) -159(AGGTGGCT,+,0.00) 95(CCGACCGC,+,0.00) -55(CAAAACTG,+,0.00) 147(CGGGAAAA,+,0.00) 112(GGCGGAGCCTCG,+,0.00) 111(GGGCGGAGCC,+,0.00) 20(GCGGCGGCGC,+,0.00),182(GCTGCGGGGC,+,0.00) 561_WT_peak_3134 chr17 34842561 34842731 + 70 NA intron (NR_104011, intron 1 of 3) CpG 175 NR_104009 9326 Hs.2210 NM_004773 HPRD:05139 ZNHIT3 TRIP3 zinc finger, HIT-type containing 3 protein-coding 0.111765 0.742690 -48(GCGGGAGGGCGG,-,0.00),-40(GCGGGAGGCCGG,-,0.00),-32(CCGGGAGGCCGG,-,0.00) -25(GCCGGGCG,+,0.00) -57(CCGGCCATGGCG,+,0.00),-55(GGCCATGGCGGG,-,0.00) -14(GCGGGCGGGCTG,+,0.00) 561_WT_peak_6148 chr6 26184122 26184310 + 70 NA exon (NM_003523, exon 1 of 1) exon (NM_003523, exon 1 of 1) 192 NM_003523 8344 Hs.534369 NM_003523 HPRD:11901 HIST1H2BE H2B.h|H2B/h|H2BFH|dJ221C16.8 histone cluster 1, H2be protein-coding 0.079787 0.571429 561_WT_peak_1931 chr12 133405435 133405647 + 70 NA promoter-TSS (NM_001172557) promoter-TSS (NM_001172557) -115 NM_001172557 2802 Hs.507333 NM_005895 HPRD:03990 GOLGA3 GCP170|MEA-2 golgin A3 protein-coding 0.089623 0.647887 -37(AGGGCCGGGG,-,0.00) -84(TCGTTCCG,+,0.00) -141(GCGGGGCGAGCG,+,0.00) 561_WT_peak_4208 chr2 96657314 96657758 + 70 NA Intergenic CpG -18763 NR_003698 729234 Hs.720108 NR_003698 ENSG00000231584 FAHD2CP - fumarylacetoacetate hydrolase domain containing 2C, pseudogene pseudo 0.076577 0.615730 253(GCGGGAGGGCGG,-,0.00) 33(TCGCCGCC,+,0.00) 258(AGGGCGGGGC,-,0.00) 250(GCCGCGGG,+,0.00) -43(TCTTCGGCTCCT,-,0.00) -91(GAAATAAGAAGC,+,0.00) 259(GGGCGGGGCT,+,0.00) 107(GCCTCTCAGC,-,0.00),239(GCTGCGGAGG,+,0.00) 561_WT_peak_5705 chr5 40486939 40487263 + 70 NA Intergenic Intergenic -192931 NM_000958 5734 Hs.199248 NM_000958 HPRD:03350 PTGER4 EP4|EP4R prostaglandin E receptor 4 (subtype EP4) protein-coding 0.000000 0.406154 91(TTTACCTG,-,0.00) 561_WT_peak_2088 chr13 100009441 100009860 + 70 NA intron (NR_026644, intron 7 of 8) intron (NR_026644, intron 7 of 8) 1265 NR_030353 693208 NR_030353 MIR623 MIRN623|hsa-mir-623 microRNA 623 ncRNA 0.019093 0.440476 36(GCTTCTTGTTTA,-,0.00) 561_WT_peak_2376 chr14 102553138 102553330 + 70 NA intron (NM_001017963, intron 2 of 11) CpG 278 NM_005348 3320 Hs.525600 NM_005348 HPRD:00777 HSP90AA1 EL52|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90kDa alpha (cytosolic), class A member 1 protein-coding 0.098958 0.735751 -111(CGCGGCCGCC,-,0.00) -102(CCGGGAGCGCGG,-,0.00) -45(CCGCGCCAGCCG,+,0.00) -97(AGCGCGGCCC,-,0.00) -92(GGCCCTGGCTGC,-,0.00) 561_WT_peak_2562 chr15 76603439 76603903 + 70 NA intron (NM_000126, intron 1 of 11) CpG 139 NM_000126 2108 Hs.39925 NM_000126 HPRD:01979 ETFA EMA|GA2|MADD electron-transfer-flavoprotein, alpha polypeptide protein-coding 0.101293 0.679570 65(TCGCCTTCCCAG,+,0.00),164(CCCCGTGCCCGG,+,0.00) 249(GAGCACGAGCCC,+,0.00) 220(CGCGAACG,+,0.00) 132(CCGCTTCCGCCG,-,0.00) 29(TAGGGACG,-,0.00) 280(TGGGCGGC,-,0.00),286(GCTGCGCA,+,0.00),288(TGCGCAGC,-,0.00) 104(CCCGGAGCCGCC,+,0.00) 286(GCTGCGCAGC,+,0.00),286(GCTGCGCAGC,-,0.00) 561_WT_peak_3227 chr17 46518724 46518964 + 70 NA Intergenic Intergenic -3351 NR_110804 101927166 Hs.149244 NR_110804 LOC101927166 - uncharacterized LOC101927166 ncRNA 0.004167 0.419087 -64(AAGTGGTT,+,0.00) 3(ACTTCCTGTGTC,-,0.00) 561_WT_peak_17 chr1 1624197 1624426 + 70 NA promoter-TSS (NM_001110781) promoter-TSS (NM_001110781) -68 NM_001110781 728661 Hs.655255 NM_001110781 ENSG00000189339 SLC35E2B SLC35E2 solute carrier family 35, member E2B protein-coding 0.091703 0.643478 -162(CCCGCGGC,-,0.00) -46(GGCCGACG,-,0.00) -160(CGCGGCTGCCCG,-,0.00) 561_WT_peak_6317 chr6 41041035 41041272 + 70 NA promoter-TSS (NM_145063) promoter-TSS (NM_145063) 446 NM_021705 4800 Hs.10441 NM_002505 NFYA CBF-A|CBF-B|HAP2|NF-YA nuclear transcription factor Y, alpha protein-coding 0.067511 0.680672 561_WT_peak_6479 chr6 134757631 134757854 + 70 NA Intergenic Intergenic -1112 NR_038216 154092 Hs.223718 NR_038216 LINC01010 - long intergenic non-protein coding RNA 1010 ncRNA 0.026906 0.428571 561_WT_peak_5233 chr3 122920224 122920476 + 70 NA promoter-TSS (NM_012430) promoter-TSS (NM_012430) -424 NM_012430 26984 Hs.477361 NM_012430 SEC22A SEC22L2 SEC22 vesicle trafficking protein homolog A (S. cerevisiae) protein-coding 0.031746 0.533597 66(AAGTGTCT,+,0.00) 561_WT_peak_946 chr10 32735164 32735391 + 70 NA promoter-TSS (NR_120660) promoter-TSS (NR_120660) 267 NR_109826 79741 Hs.585464 NM_024688 HPRD:10698 CCDC7 BioT2-A|BioT2-B|BioT2-C|C10orf68 coiled-coil domain containing 7 protein-coding 0.039648 0.565789 4(AGGGCGGGGA,-,0.00) -42(CCAAACCG,+,0.00) -38(ACCGCCCA,+,0.00) 8(CGGGGAGCCTCG,+,0.00) 561_WT_peak_2855 chr16 57496503 57496714 + 70 NA promoter-TSS (NM_032940) promoter-TSS (NM_032940) 57 NM_032940 5432 Hs.79402 NM_002694 HPRD:15945 POLR2C RPB3|RPB31|hRPB33|hsRPB3 polymerase (RNA) II (DNA directed) polypeptide C, 33kDa protein-coding 0.118483 0.660377 -26(CGTACGCC,-,0.00) -129(CGGAAGCCGCGG,+,0.00) -97(CGGTGTTG,-,0.00) -81(GCCGCGCA,+,0.00) -88(CGGTGGCGCCGC,-,0.00) -118(GAGGCCTCGCTG,+,0.00) 561_WT_peak_615 chr1 169862930 169863100 + 70 NA promoter-TSS (NM_181093) promoter-TSS (NM_181093) 85 NM_181093 57147 Hs.435560 NM_020423 HPRD:07459 SCYL3 PACE-1|PACE1 SCY1-like 3 (S. cerevisiae) protein-coding 0.041176 0.637427 -147(GGAGGAGGCCGA,-,0.00) -144(GGAGGCCGAG,+,0.00) -151(CGGGGGAGGAGG,-,0.00) -153(GGCGGGGG,+,0.00) -18(TAGAGACG,-,0.00) -40(GGGCCGGGTT,+,0.00) 561_WT_peak_3113 chr17 30411017 30411234 + 70 NA Intergenic Intergenic 43770 NR_033412 6458 Hs.672460 NR_033412 SH3GL1P1 CNSA-P1|SH3GLP1 SH3-domain GRB2-like 1 pseudogene 1 pseudo 0.059908 0.605505 561_WT_peak_4543 chr20 2451680 2451801 + 70 NA promoter-TSS (NM_198216) promoter-TSS (NM_198216) -241 NM_198216 6628 Hs.83753 NM_003091 HPRD:01655 SNRPB COD|SNRPB1|Sm-B/B'|SmB/B'|SmB/SmB'|snRNP-B small nuclear ribonucleoprotein polypeptides B and B1 protein-coding 0.033058 0.549180 -144(CACCCTCCCCGG,+,0.00) 561_WT_peak_4107 chr2 65283756 65284078 + 70 NA intron (NM_015147, intron 1 of 6) CpG 422 NM_015147 23177 Hs.709257 NM_015147 HPRD:13808 CEP68 KIAA0582 centrosomal protein 68kDa protein-coding 0.127329 0.761610 -14(GGCGGCCGAG,+,0.00),71(GGCGGCCGAG,+,0.00) 130(AGGCCTCT,+,0.00) -70(GGCGGGGG,+,0.00) -58(TCGTGCCT,+,0.00) -53(CCTTCGCCTCCA,-,0.00) 37(GGCGCGGC,-,0.00),60(TCCGCGCA,+,0.00) 38(GCGCGGCGAGGG,+,0.00) 54(CGCGAGTCCGCG,-,0.00) 6(CGAGGCGG,+,0.00) 83(GCTGCGCCGC,+,0.00),83(GCTGCGCCGC,-,0.00) 561_WT_peak_3052 chr17 16342413 16342597 + 70 NA promoter-TSS (NR_002744) promoter-TSS (NR_002744) 204 NR_027169 125144 Hs.368934 NM_152350 HPRD:17549 LRRC75A-AS1 C17orf45|C17orf76-AS1|FAM211A-AS1|NCRNA00188|TSAP19 LRRC75A antisense RNA 1 ncRNA 0.092391 0.670270 -115(CCGGGAAGCCTG,-,0.00) -36(CGGCGGGCGCTG,-,0.00) -19(CGGTATTG,-,0.00) -72(CGTGGCTCCCCG,-,0.00) 561_WT_peak_5002 chr3 11667698 11667869 + 70 NA intron (NM_014667, intron 2 of 5) intron (NM_014667, intron 2 of 5) 17668 NM_001128219 9686 Hs.740389 NM_014667 HPRD:11672 VGLL4 VGL-4 vestigial-like family member 4 protein-coding 0.011696 0.389535 561_WT_peak_4754 chr21 26935739 26936124 + 70 NA intron (NR_001458, intron 1 of 2) intron (NR_001458, intron 1 of 2) 1474 NR_001458 114614 Hs.697120 NR_001458 ENSG00000234883 MIR155HG BIC|MIRHG2|NCRNA00172 MIR155 host gene (non-protein coding) ncRNA 0.005195 0.455959 18(GGGTTTTG,-,0.00) 561_WT_peak_7306 chr9 75767947 75768122 + 70 NA intron (NM_000700, intron 1 of 12) intron (NM_000700, intron 1 of 12) 1253 NM_000700 301 Hs.494173 NM_000700 HPRD:01060 ANXA1 ANX1|LPC1 annexin A1 protein-coding 0.000000 0.369318 561_WT_peak_2144 chr14 24630461 24630674 + 70 NA TTS (NM_017999) TTS (NM_017999) 145 NM_006084 10379 Hs.1706 NM_006084 HPRD:00960 IRF9 IRF-9|ISGF3|ISGF3G|p48 interferon regulatory factor 9 protein-coding 0.023474 0.565421 -141(GCCGCCCA,+,0.00) 561_WT_peak_6355 chr6 56954971 56955410 + 70 NA intron (NM_001257273, intron 1 of 3) CpG 362 NM_015555 26036 Hs.485628 NM_015555 HPRD:10332 ZNF451 COASTER|dJ417I1.1 zinc finger protein 451 protein-coding 0.091116 0.650000 -78(AGACCCGGGGTC,+,0.00) 10(GGCCTGGTGCTC,-,0.00) 120(CGCCCGGC,-,0.00) -147(TCGTGGCG,+,0.00) -144(TGGCGACG,-,0.00),176(GAGCGACG,-,0.00) -93(CGTCGGAG,+,0.00) 205(CGGTGTTG,-,0.00) -136(GCGGCGGCAGGG,+,0.00),163(GCTGGGCCAGTG,+,0.00) 58(GGGCCGAGCC,+,0.00) -21(CCGCGAAG,-,0.00) -143(GGCGACGGCGGC,-,0.00) 21(CCGTCGCAGC,-,0.00) 561_WT_peak_1952 chr13 23949050 23949283 + 70 NA intron (NM_014363, intron 3 of 9) CpG 516 NM_001278055 26278 Hs.159492 NM_014363 HPRD:05135 SACS ARSACS|DNAJC29|PPP1R138|SPAX6 sacsin molecular chaperone protein-coding 0.124464 0.705128 46(CGCGGCCGCC,-,0.00) 21(CAGCGCCCCCGG,+,0.00) -17(TCGACGCC,+,0.00) 26(CCCCCGGC,-,0.00) -58(TCGCGCCG,+,0.00) 53(GCCGCGCC,+,0.00) -56(GCGCCGCCCGCG,+,0.00) 4(CGTGGCGG,+,0.00) -80(GCGGCCACGCTG,+,0.00) 561_WT_peak_7360 chr9 98585111 98585342 + 70 NA intron (NR_023390, intron 2 of 2) intron (NR_023390, intron 2 of 2) -52674 NM_001010895 375748 Hs.432364 NM_020207 HPRD:17362 ERCC6L2 BMFS2|C9orf102|RAD26L|SR278 excision repair cross-complementation group 6-like 2 protein-coding 0.008658 0.439655 -161(AAGTGGCT,+,0.00) -3(CGTGGCTA,+,0.00) 561_WT_peak_5238 chr3 125803117 125803291 + 70 NA promoter-TSS (NM_017836) promoter-TSS (NM_017836) -70 NM_001008486 54946 Hs.573007 NM_017836 HPRD:11580 SLC41A3 SLC41A1-L2 solute carrier family 41, member 3 protein-coding 0.109195 0.742857 -27(ATGCGGCT,+,0.00) -135(CGGGGATCGCGG,-,0.00) -160(GCCGGGGG,+,0.00) 561_WT_peak_1221 chr11 14913031 14913510 + 70 NA intron (NM_024514, intron 1 of 4) CpG 481 NM_024514 120227 Hs.371427 NM_024514 HPRD:10569 CYP2R1 - cytochrome P450, family 2, subfamily R, polypeptide 1 protein-coding 0.091858 0.672917 102(CGGCCCGGAGTG,+,0.00) 181(CCGGGAAGCGGG,-,0.00) 154(GGCGTCGA,-,0.00) 303(TCCCTGCCCG,+,0.00) 300(CCCTCCCTGCCC,+,0.00) 69(CGGGAAAA,+,0.00) 14(GGCGCGGC,-,0.00) 92(CTCGGAGCCTCG,+,0.00) 126(GGGCGGGGCT,+,0.00) -80(CCGACAAG,-,0.00),-43(CCGACTCG,-,0.00),228(CCGACTAG,-,0.00),232(CTAGTCGG,+,0.00) -52(GCTGCGAGGC,+,0.00) 12(GCGGCGCGGCTG,+,0.00),289(CAGCCTGGCGGC,-,0.00) 561_WT_peak_1455 chr11 94276862 94277484 + 70 NA 5' UTR (NM_002033, exon 1 of 1) 5' UTR (NM_002033, exon 1 of 1) 156 NM_002033 2526 Hs.390420 NM_002033 HPRD:00083 FUT4 CD15|ELFT|FCT3A|FUC-TIV|FUTIV|LeX|SSEA-1 fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) protein-coding 0.102894 0.703050 293(CGGCCCGGAAGC,+,0.00) 449(TGGCGGCT,+,0.00) 8(GGCGTCGC,-,0.00) -39(CCCCCGGC,-,0.00) 36(CGGCAGGA,-,0.00),367(TCGGGCCG,+,0.00) 10(CGTCGCTG,+,0.00),47(CGACGCTA,+,0.00) -61(GCCGCGCC,+,0.00),108(TGCGCGGC,-,0.00),289(GGCGCGGC,-,0.00) -66(CGGTGGCCGCGC,-,0.00),70(CGCCGGGTCCGC,-,0.00) 65(CGCGGCGCCGGG,+,0.00),65(CGCGGCGCCGGG,-,0.00) 289(GGCGCGGCCC,-,0.00) -101(CGTCTCGG,+,0.00) 210(GGCCAGGGCGGT,-,0.00),444(TGCCCTGGCGGC,-,0.00) -124(GCGGGCTGCCTC,+,0.00) 561_WT_peak_977 chr10 43857934 43858125 + 69 NA Intergenic CpG -9063 NM_001184963 53828 Hs.130497 NM_173160 HPRD:07019 FXYD4 CHIF FXYD domain containing ion transport regulator 4 protein-coding 0.073298 0.666667 -51(CCGTGCCG,+,0.00) -82(CGTCGCTG,+,0.00) 1(CCATCTCTGCCC,+,0.00) -47(GCCGCCTTGTCC,+,0.00) 561_WT_peak_5256 chr3 130612101 130612930 + 69 NA promoter-TSS (NM_014382) promoter-TSS (NM_014382) -320 NM_001199179 27032 Hs.584884 NM_014382 HPRD:05089 ATP2C1 ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1 ATPase, Ca++ transporting, type 2C, member 1 protein-coding 0.078408 0.614458 470(CATTCCGGGCCG,-,0.00),475(CGGGCCGAAGTC,+,0.00) 285(CGCGGCCGCC,-,0.00) 430(AGCGACCT,-,0.00) 505(CCGCCTTCCCAG,+,0.00) -150(GGCTTCGA,-,0.00) 427(CCGAGCGA,+,0.00) 283(CCCGCGGC,-,0.00) 508(CCTTCCCAGCCC,+,0.00) 66(GGGTTTTG,-,0.00) 612(TGGGCGGC,-,0.00) 246(TCGGGGACAGCG,+,0.00),276(GGCCGACCCCGC,-,0.00) 311(CCGACACG,-,0.00) 508(CCTTCCCAGC,-,0.00) 561_WT_peak_6593 chr7 10980159 10980345 + 69 NA promoter-TSS (NM_002489) promoter-TSS (NM_002489) -439 NM_002489 4697 Hs.50098 NM_002489 HPRD:04831 NDUFA4 CI-9k|CI-MLRQ|MLRQ NDUFA4, mitochondrial complex associated protein-coding 0.091398 0.657754 -97(GCCGGGCG,+,0.00) -69(TCTTGCCG,+,0.00) -108(GGGAGCCGAGCG,+,0.00) -24(GCTTCCTGTGTT,-,0.00) -158(TGCGCGCT,-,0.00),-122(TGCGCGGC,-,0.00) -124(GCTGCGCGGC,+,0.00) 561_WT_peak_1614 chr12 12940035 12940266 + 69 NA exon (NM_001130415, exon 2 of 2) exon (NM_001130415, exon 2 of 2) 1609 NM_030817 81575 Hs.23388 NM_030817 HPRD:13153 APOLD1 VERGE apolipoprotein L domain containing 1 protein-coding 0.086580 0.689655 -157(TCGCCGCC,+,0.00) -89(GGGCTGGGGGTG,-,0.00) -138(CTCGCTCAGCCC,+,0.00) -12(GCTGCGGAGG,+,0.00) 561_WT_peak_4386 chr2 182756922 182757109 + 69 NA intron (NR_109843, intron 1 of 17) CpG 572 NM_001287505 6744 Hs.196983 NM_006751 HPRD:00353 SSFA2 CS-1|CS1|KRAP|SPAG13 sperm specific antigen 2 protein-coding 0.106952 0.739362 -140(GGAGGAGGACGA,-,0.00) -159(AAGCGACG,-,0.00) 561_WT_peak_3293 chr17 61775334 61775508 + 69 NA 3' UTR (NM_030576, exon 5 of 5) 3' UTR (NM_030576, exon 5 of 5) 2098 NM_030576 80774 Hs.591166 NM_030576 HPRD:14407 LIMD2 - LIM domain containing 2 protein-coding 0.017241 0.634286 561_WT_peak_2505 chr15 60884542 60884714 + 69 NA promoter-TSS (NM_134262) promoter-TSS (NM_134262) 79 NM_134262 6095 Hs.560343 NM_002943 HPRD:02896 RORA NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR-related orphan receptor A protein-coding 0.133721 0.734104 -34(CTCTGCCGCC,-,0.00) -162(AGCCGCCA,-,0.00) -12(CCGCCCGA,+,0.00) -52(GTCCGACC,-,0.00) -24(GCCGCGCC,+,0.00) -20(CGCCGCCGCCGC,-,0.00) -21(GCGCCGCCGC,-,0.00) 561_WT_peak_6457 chr6 119400022 119400209 + 69 NA promoter-TSS (NM_024581) promoter-TSS (NM_024581) -303 NM_024581 79632 Hs.443789 NM_024581 HPRD:09856 FAM184A C6orf60 family with sequence similarity 184, member A protein-coding 0.096257 0.601064 -95(GGCGGCGA,-,0.00),1(GGTGTCGA,-,0.00) -105(GCCCAGCCCT,+,0.00) -146(TCGTGCCG,+,0.00) -101(AGCCCTGGCGGC,-,0.00) 561_WT_peak_3512 chr18 56355186 56355446 + 69 NA intron (NM_006785, intron 2 of 16) intron (NM_006785, intron 2 of 16) -16211 NM_001289967 101927322 Hs.644875 NM_001289967 LOC101927322 - uncharacterized LOC101927322 protein-coding 0.015385 0.425287 -137(TTTACCAG,-,0.00) 561_WT_peak_3209 chr17 44270550 44270785 + 69 NA promoter-TSS (NR_034172) promoter-TSS (NR_034172) -272 NR_034172 644246 Hs.644600 NR_034172 ENSG00000214401 KANSL1-AS1 - KANSL1 antisense RNA 1 ncRNA 0.144681 0.728814 -114(CCCGGCCGCC,-,0.00),29(GGCGGCCGAG,+,0.00) -122(CCGCCACCCCCG,+,0.00) -116(CCCCCGGC,-,0.00) -43(CTTCGCTA,+,0.00) -19(CGCCGGCTCGGC,-,0.00) -69(CGCGCCGCCGCG,+,0.00),-69(CGCGCCGCCGCG,-,0.00) -51(CGAGTCGG,+,0.00) -68(GCGCCGCCGC,-,0.00) -130(CACCCAGGCCGC,-,0.00) 561_WT_peak_3558 chr19 1269424 1269950 + 69 NA intron (NM_001300829, intron 1 of 5) CpG-12220 420 NR_023312 1153 Hs.618145 NM_001280 HPRD:08375 CIRBP CIRP cold inducible RNA binding protein protein-coding 0.127376 0.724858 23(CGACCCGGTTGC,+,0.00) 46(GGCGGCCGCG,+,0.00) -60(CCGCCCCGCCGG,+,0.00),91(CCGAGTTCCCGG,+,0.00),182(CCGCTTTCCCGG,+,0.00) -50(GGCGGCGA,-,0.00) 136(CGCACGCG,-,0.00) 143(GGCGGGGG,+,0.00) -98(CGGCACGC,-,0.00) 223(CGCTTTTG,-,0.00) -78(GCGGGCCCGGGG,+,0.00),144(GCGGGGGCGGGG,+,0.00) -26(GGGCCGAGTA,+,0.00),88(GCGCCGAGTT,+,0.00),179(GGGCCGCTTT,+,0.00) -114(CGAGGCGG,+,0.00),-23(CCGAGTAG,-,0.00) 561_WT_peak_313 chr1 89761007 89761224 + 69 NA Intergenic Intergenic -5070 NR_077244 729930 Hs.745054 NR_077244 LOC729930 - chromosome 11 open reading frame 74 pseudogene pseudo 0.004608 0.412844 -62(CGGTTTTA,-,0.00) 30(CTGGTAAA,+,0.00) 561_WT_peak_2635 chr15 102192807 102193018 + 69 NA promoter-TSS (NM_078474) promoter-TSS (NM_078474) -318 NM_025141 80213 Hs.288912 NM_025141 HPRD:16554 TM2D3 BLP2 TM2 domain containing 3 protein-coding 0.094787 0.603774 -130(TGGACCGAAATG,+,0.00) 13(AGACACTT,-,0.00) -87(CGAACGCG,-,0.00) 34(GAAGCGGCCC,-,0.00) 561_WT_peak_3242 chr17 47865780 47865945 + 69 NA promoter-TSS (NM_001199156) promoter-TSS (NM_001199156) -119 NM_001199155 11143 Hs.21907 NM_007067 HPRD:07135 KAT7 HBO1|HBOA|MYST2|ZC2HC7 K(lysine) acetyltransferase 7 protein-coding 0.030303 0.506024 561_WT_peak_6555 chr6 170123542 170123738 + 69 NA intron (NM_018288, intron 1 of 11) intron (NM_018288, intron 1 of 11) 466 NM_018288 55274 Hs.435933 NM_018288 HPRD:11428 PHF10 BAF45A|XAP135 PHD finger protein 10 protein-coding 0.122449 0.670051 21(CCGCGTCCCCCG,+,0.00) -119(CGAACGCG,-,0.00) -84(CTCTCTCGGCCC,+,0.00) -60(GTCCCACG,-,0.00) -139(TGCGCGGA,-,0.00),15(GCCGCGCC,+,0.00) 561_WT_peak_6793 chr7 102389762 102389950 + 69 NA exon (NM_001145268, exon 1 of 8) exon (NM_001145268, exon 1 of 8) 457 NM_001145268 222234 Hs.202543 NM_147194 FAM185A - family with sequence similarity 185, member A protein-coding 0.095745 0.719577 -93(GGCGCCGA,-,0.00) -51(TTGGTCGG,-,0.00) -38(GGCGCGGC,-,0.00) -136(CGCTGGCCCGGA,-,0.00) 561_WT_peak_6941 chr8 22298203 22298614 + 69 NA promoter-TSS (NM_001243974) promoter-TSS (NM_001243974) -75 NM_005605 5533 Hs.731683 NM_005605 HPRD:00236 PPP3CC CALNA3|CNA3|PP2Bgamma protein phosphatase 3, catalytic subunit, gamma isozyme protein-coding 0.138686 0.766990 57(GGACCCGGAGCC,+,0.00) -82(CCGGCCTCCCGC,+,0.00),10(CGGGGAGGGCTG,-,0.00),111(GCGGGAAGGCGG,-,0.00) 86(CGCGTGCG,+,0.00) 62(CGGAGCCGGAGG,+,0.00) 40(TGGGCGGT,-,0.00) -88(GCCGGGCCGGCC,+,0.00),-62(CGCGGGCCACGC,-,0.00) -129(CGCGGAGCCGCT,+,0.00) -106(GGGCCGGGTC,+,0.00),-50(GGGCGGGTTT,+,0.00),134(GGGCGGCGCT,+,0.00) -150(CGAGGCGG,+,0.00) -120(GCTGCGAGGC,+,0.00) -119(CTGCGAGGCCGC,-,0.00),14(GAGGGCTGGCTG,+,0.00),176(CAGCGGGGCCGC,-,0.00) 561_WT_peak_6878 chr7 143398331 143398774 + 69 NA intron (NM_173678, intron 1 of 6) intron (NM_173678, intron 1 of 6) -14387 NM_001130026 285966 Hs.743565 NM_173678 HPRD:07117 FAM115C FAM139A family with sequence similarity 115, member C protein-coding 0.033860 0.563063 -64(ATGTGGCT,+,0.00) 223(AACGCTGCCC,-,0.00) 561_WT_peak_13 chr1 1334473 1334730 + 69 NA promoter-TSS (NR_015434) promoter-TSS (NR_015434) 117 NM_001039577 81669 Hs.515704 NM_030937 HPRD:10815 CCNL2 ANIA-6B|CCNM|CCNS|HCLA-ISO|HLA-ISO|PCEE|SB138 cyclin L2 protein-coding 0.112840 0.713178 -24(GATCCCGGGGCG,-,0.00) -156(AGGCCGCT,+,0.00) -163(GGTGTCGA,-,0.00),-159(TCGAGGCC,+,0.00) -17(GGGCGCCGGCCG,+,0.00),19(CAGCACCAGCCG,+,0.00) -3(GCCGCGGG,+,0.00) 51(TTGTGCCG,+,0.00) 71(CGGCTTCTTCCC,-,0.00) 67(CCTTCGGCTTCT,-,0.00) 29(CGCCGCCGCCGC,-,0.00),32(CGCCGCCGCCGC,-,0.00),35(CGCCGCCGCCGC,-,0.00) 561_WT_peak_4958 chr22 43583579 43583958 + 69 NA promoter-TSS (NM_015140) promoter-TSS (NM_015140) -631 NM_015140 23170 Hs.517670 NM_015140 HPRD:13782 TTLL12 dJ526I14.2 tubulin tyrosine ligase-like family, member 12 protein-coding 0.092348 0.631579 -10(AGGACCGGAAAA,+,0.00),13(CGGCCCGGAAGG,+,0.00) -46(CCGGGAGGGCGG,-,0.00),42(CCGGTGAGGCGG,-,0.00) -108(CGCACGCG,-,0.00) 5(CCCACCGA,+,0.00) 148(CAAAATCG,+,0.00) -139(ACCGCGCC,+,0.00) 561_WT_peak_5195 chr3 107940942 107941144 + 69 NA exon (NM_018010, exon 1 of 11) exon (NM_018010, exon 1 of 11) 374 NM_018010 55081 Hs.412196 NM_018010 HPRD:09430 IFT57 ESRRBL1|HIPPI|MHS4R2 intraflagellar transport 57 protein-coding 0.084158 0.660099 25(CAAACCCG,+,0.00) -46(GCCGCGCC,+,0.00) 561_WT_peak_1117 chr10 102046185 102046387 + 69 NA promoter-TSS (NM_001282438) promoter-TSS (NM_001282438) -151 NM_001282438 282991 Hs.34906 NM_173809 BLOC1S2 BLOS2|CEAP|CEAP11 biogenesis of lysosomal organelles complex-1, subunit 2 protein-coding 0.069307 0.665025 1(CATTCCGGGTAC,-,0.00) -36(GAGCCCCAGGCC,+,0.00) 14(TCGGGCGG,-,0.00) -44(CCGAGACG,-,0.00) 561_WT_peak_7384 chr9 110045582 110045753 + 69 NA promoter-TSS (NM_001244724) promoter-TSS (NM_001244724) 150 NM_002874 5887 Hs.521640 NM_002874 HPRD:06772 RAD23B HHR23B|HR23B|P58 RAD23 homolog B (S. cerevisiae) protein-coding 0.134503 0.732558 -52(CGGGGAAGGCCG,-,0.00) -96(TGGCTGGCGCTC,-,0.00) -65(CGGCCCGA,-,0.00) -34(CGGAGGCAGCGG,+,0.00) -24(GGCGCGGT,-,0.00) -35(GCGGAGGCAGCG,+,0.00) -64(GGCCCGAGTT,+,0.00) 561_WT_peak_2880 chr16 68877404 68877721 + 69 NA promoter-TSS (NM_024562) promoter-TSS (NM_024562) 53 NM_024562 79613 Hs.13526 NM_024562 ENSG00000103047 TANGO6 TMCO7 transport and golgi organization 6 homolog (Drosophila) protein-coding 0.100946 0.698113 101(GCTTCCGGGGCT,-,0.00) 98(CCGGCTTCCGGG,+,0.00) 95(CGCCCGGC,-,0.00) -43(CGGCCCGA,-,0.00) -109(GCGGCGGCGGCG,+,0.00) 56(CGCATCTCCGCG,-,0.00) 145(CCGCCTCG,-,0.00) -51(AGTCATGGCGGC,-,0.00) -106(GCGGCGGCGC,+,0.00),-25(GCAGCGGGGC,+,0.00),30(GCTGCTGAGC,+,0.00) 561_WT_peak_2653 chr16 2041836 2042062 + 69 NA intron (NM_004209, intron 1 of 3) CpG 2003 NM_004209 9143 Hs.435277 NM_004209 HPRD:06801 SYNGR3 - synaptogyrin 3 protein-coding 0.128319 0.709251 -10(GTCTTCGGGCCC,-,0.00) -41(GCCGCGCC,+,0.00) 30(ACAGCGGCCC,-,0.00) -84(CGAGGCGG,+,0.00) 561_WT_peak_4103 chr2 64553271 64553456 + 69 NA Intergenic Intergenic 97828 NR_120420 100507006 Hs.442789 NR_120420 LOC100507006 - uncharacterized LOC100507006 ncRNA 0.005405 0.456989 561_WT_peak_5420 chr4 15004438 15004689 + 69 NA promoter-TSS (NR_038857) promoter-TSS (NR_038857) 265 NM_001177381 132864 Hs.656937 NM_182485 HPRD:16744 CPEB2 CPE-BP2|CPEB-2|hCPEB-2 cytoplasmic polyadenylation element binding protein 2 protein-coding 0.123506 0.726190 -118(TCCCCCTTCTCC,+,0.00) -80(CCCGGCCGCC,-,0.00) 70(CGGCACGA,-,0.00) -67(GCTTCCTCTTCC,-,0.00) 10(GGCGCGGC,-,0.00) 14(CGGCCGCTTT,+,0.00) -96(GCGGCGGCGC,+,0.00) -83(CAGCCCGGCCGC,-,0.00) 561_WT_peak_708 chr1 207224137 207224471 + 69 NA exon (NM_018566, exon 1 of 2) exon (NM_018566, exon 1 of 2) 118 NM_018566 55432 Hs.567533 NM_018566 HPRD:10312 YOD1 DUBA8|OTUD2|PRO0907 YOD1 deubiquitinase protein-coding 0.089820 0.638806 -71(AGCCGCCA,-,0.00) -56(TCGGTCCG,-,0.00) -61(TCGTGTCG,+,0.00) 103(TCGCGACG,-,0.00) 17(CGGGGAAA,+,0.00) -26(GCGGGGCCAGCT,+,0.00) -76(AGCGGAGCCGCC,+,0.00) -60(CGTGTCGG,+,0.00) -83(GCCTTGCAGC,-,0.00),-78(GCAGCGGAGC,+,0.00) 561_WT_peak_505 chr1 150039449 150039834 + 69 NA promoter-TSS (NM_001279355) promoter-TSS (NM_001279355) -84 NM_001279355 11311 Hs.443750 NM_007259 HPRD:10301 VPS45 H1|H1VPS45|SCN5|VPS45A|VPS45B|VPS54A|VSP45|VSP45A vacuolar protein sorting 45 homolog (S. cerevisiae) protein-coding 0.059740 0.621762 19(GAGTCCGGGCCT,-,0.00) 206(GGGAGGAAGCAG,+,0.00) 91(CCGTCTCAGCCG,+,0.00) 561_WT_peak_1443 chr11 85779707 85780111 + 69 NA 5' UTR (NM_001206946, exon 1 of 20) 5' UTR (NM_001206946, exon 1 of 20) 230 NM_001008660 8301 Hs.163893 NM_007166 HPRD:04320 PICALM CALM|CLTH|LAP phosphatidylinositol binding clathrin assembly protein protein-coding 0.076733 0.696296 121(AACCGGCT,+,0.00) 56(GCTCCTTCCCCG,+,0.00) -75(TCGGTCCG,-,0.00) 172(CCCCCGCC,-,0.00) 54(CGGCTCCTTCCC,-,0.00) 143(AGTCGGAC,+,0.00) -89(TGGGCGGC,-,0.00),81(GGCGCGGT,-,0.00) -9(GCGGGGACTGGG,+,0.00) -21(GCTCAGCAGC,-,0.00) 561_WT_peak_1251 chr11 35099588 35099842 + 69 NA Intergenic Intergenic 59864 NR_120528 100507144 Hs.673491 NR_120528 ENSG00000255521 LOC100507144 - uncharacterized LOC100507144 ncRNA 0.003937 0.411765 561_WT_peak_6076 chr6 2765681 2766125 + 69 NA exon (NM_020135, exon 1 of 7) exon (NM_020135, exon 1 of 7) 237 NM_130395 56897 Hs.236828 NM_020135 HPRD:10494 WRNIP1 WHIP|bA420G6.2 Werner helicase interacting protein 1 protein-coding 0.146396 0.766292 -132(GCGCCCTCCTCC,+,0.00) 23(CGGGCCGGAAGA,+,0.00) -9(CCGGGGAGGGCG,-,0.00),-8(CGGGGAGGGCGG,-,0.00),145(CGGGGCACGCGG,-,0.00),181(CCGGGGAGCGGG,-,0.00) -59(GGCATCGA,-,0.00),204(TCGCCGCC,+,0.00) -44(CGCGTGCG,+,0.00) -95(CCGAGCGA,+,0.00) -17(GCCGGGCG,+,0.00),159(CCCGCGGC,-,0.00),208(CGCCCGGC,-,0.00) 201(CCCTCGCCGCCC,+,0.00) -22(GCCGCGCC,+,0.00),96(GCCGCGCA,+,0.00),175(ACCGCGCC,+,0.00) 144(GCGGGGCACGCG,+,0.00),153(GCGGAGCCCGCG,+,0.00) 6(GCCGCCATGGAG,+,0.00) 561_WT_peak_6000 chr5 157170529 157170735 + 69 NA promoter-TSS (NM_173491) promoter-TSS (NM_173491) -123 NM_173491 134353 Hs.631954 NM_173491 LSM11 - LSM11, U7 small nuclear RNA associated protein-coding 0.131068 0.719807 14(TGGCGGCT,+,0.00) -92(CGCGTACC,+,0.00) -80(CCCCCGGC,-,0.00),-43(CCCGCGGC,-,0.00) -5(GCTGCGCA,+,0.00),-3(TGCGCAGT,-,0.00) -100(GTCGGAGCCGCG,+,0.00),-9(CGCGGCTGCGCA,-,0.00) -118(GGTGCGAGGC,+,0.00) -77(CCGGCCCGGGTG,+,0.00) 561_WT_peak_5454 chr4 40057815 40058034 + 69 NA promoter-TSS (NM_018177) promoter-TSS (NM_018177) -600 NM_018177 55728 Hs.391463 NM_018177 HPRD:11382 N4BP2 B3BP NEDD4 binding protein 2 protein-coding 0.086758 0.609091 29(AATTCCGGGCCT,-,0.00) 6(ACCGCGCC,+,0.00) -159(CGCTCGCCTCGC,-,0.00) 561_WT_peak_7324 chr9 88357307 88357454 + 69 NA promoter-TSS (NM_001286717) promoter-TSS (NM_001286717) -436 NM_015239 23287 Hs.719980 NM_015239 HPRD:08442 AGTPBP1 CCP1|NNA1 ATP/GTP binding protein 1 protein-coding 0.040816 0.533784 561_WT_peak_919 chr10 26719798 26719846 + 69 NA Intergenic L2|LINE|L2 -7444 NM_019043 54518 Hs.310421 NM_019043 HPRD:16420 APBB1IP INAG1|PREL1|RARP1|RIAM amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding 0.000000 0.367347 -141(AAGTGGTT,+,0.00) 561_WT_peak_4416 chr2 197076135 197076461 + 69 NA intron (NM_020760, intron 28 of 28) intron (NM_020760, intron 28 of 28) -39962 NM_004226 9262 Hs.88297 NM_004226 HPRD:05289 STK17B DRAK2 serine/threonine kinase 17b protein-coding 0.009202 0.443425 561_WT_peak_5838 chr5 81147717 81147966 + 69 NA Intergenic Intergenic -100769 NM_001256736 23635 Hs.102735 NM_012446 SSBP2 HSPC116|SOSS-B2 single-stranded DNA binding protein 2 protein-coding 0.084337 0.604000 -32(CCGCGCTCCCTG,+,0.00) -105(TCGGGCGG,-,0.00) 561_WT_peak_3179 chr17 40169030 40169437 + 69 NA promoter-TSS (NM_001144766) promoter-TSS (NM_001144766) -50 NM_001144766 7266 Hs.500156 NM_003315 ENSG00000168259 DNAJC7 DJ11|DJC7|TPR2|TTC2 DnaJ (Hsp40) homolog, subfamily C, member 7 protein-coding 0.083538 0.647059 196(CTCGGTCGCC,-,0.00) 232(AGCCGCCA,-,0.00) -160(TCGACGCC,+,0.00),178(GTCGTCGA,-,0.00),201(TCGCCGCC,+,0.00) 197(TCGGTCGC,-,0.00) 56(AGGGCGGGGC,-,0.00) -24(GGGAGAGGAAGG,+,0.00) -155(GCCGCGCC,+,0.00) 561_WT_peak_1249 chr11 35035387 35035485 + 69 NA Intergenic Intergenic 72052 NR_039836 100616437 NR_039836 MIR1343 - microRNA 1343 ncRNA 0.000000 0.363636 561_WT_peak_3777 chr19 42364238 42364408 + 69 NA 5' UTR (NM_001022, exon 1 of 6) 5' UTR (NM_001022, exon 1 of 6) 335 NM_001022 6223 Hs.438429 NM_001022 HPRD:04591 RPS19 DBA|DBA1|S19 ribosomal protein S19 protein-coding 0.135294 0.713450 561_WT_peak_4369 chr2 174829084 174829338 + 69 NA promoter-TSS (NM_001017371) promoter-TSS (NM_001017371) -264 NM_001017371 6670 Hs.531587 NM_003111 HPRD:03483 SP3 SPR2 Sp3 transcription factor protein-coding 0.118110 0.725490 65(GGAGGAAGGCGG,-,0.00) -115(CTGGGCCGCC,-,0.00) -158(CGGCGCGA,-,0.00) -23(CGCCGCTA,+,0.00) 78(TGGCGGAGAGGG,-,0.00) 29(GGGAGCTGCAGG,+,0.00) -159(GCGGCGCGAGGG,+,0.00),-143(GCCGGGCCGGGG,+,0.00),-106(CGCTGCCGCCGC,-,0.00),-44(CGCCGCCGCCGC,-,0.00),-29(CGCCGCCGCCGC,-,0.00) -162(AAAGCGGCGC,-,0.00) -55(CTCGCCGTGGCC,+,0.00),-53(CGCCGTGGCCGC,-,0.00) -145(GAGCCGGGCCGG,-,0.00) 561_WT_peak_5515 chr4 81105295 81105577 + 69 NA promoter-TSS (NM_020226) promoter-TSS (NM_020226) -988 NM_020226 56978 Hs.373642 NM_020226 HPRD:17904 PRDM8 PFM5 PR domain containing 8 protein-coding 0.081560 0.681979 -139(CGCGGAGGGCGG,-,0.00) -139(CGCGGAGGGCGG,-,0.00),-2(CGGGGAACGCTG,-,0.00) -66(GGGCGCCAGCAC,+,0.00),-36(GGGCTGGCTCTG,-,0.00) -11(CCCCCGCC,-,0.00) -99(GAAGCAGGGAGC,+,0.00) 56(ACCGCCCA,+,0.00) -53(CCGGGGCCGGGG,+,0.00) 561_WT_peak_3549 chr19 610786 611131 + 69 NA intron (NM_001194, intron 5 of 7) MLT1C|LTR|ERVL-MaLR 21065 NM_001194 610 Hs.124161 NM_001194 HPRD:07213 HCN2 BCNG-2|BCNG2|HAC-1 hyperpolarization activated cyclic nucleotide-gated potassium channel 2 protein-coding 0.049275 0.624277 -5(CTGCCTCTTCCG,-,0.00) 561_WT_peak_6598 chr7 16685837 16686035 + 69 NA promoter-TSS (NM_020319) promoter-TSS (NM_020319) 177 NM_001159767 28969 Hs.487635 NM_014038 HPRD:16571 BZW2 MST017|MSTP017 basic leucine zipper and W2 domains 2 protein-coding 0.095960 0.703518 -29(CCGCCCCGCCGG,+,0.00) -143(CTGCACGA,-,0.00) -108(CGTCGCTA,+,0.00),-38(TAGCGACT,-,0.00) -97(CCTCGGAC,+,0.00) 561_WT_peak_696 chr1 205254917 205255175 + 69 NA Intergenic AluJb|SINE|Alu 29717 NM_001297613 9911 Hs.6360 NM_014858 HPRD:11040 TMCC2 HUCEP11 transmembrane and coiled-coil domain family 2 protein-coding 0.023256 0.482625 -94(CCTACGCG,-,0.00) 561_WT_peak_407 chr1 117307186 117307356 + 69 NA intron (NM_001767, intron 4 of 4) intron (NM_001767, intron 4 of 4) 10185 NM_001767 914 Hs.523500 NM_001767 HPRD:01750 CD2 LFA-2|SRBC|T11 CD2 molecule protein-coding 0.017647 0.461988 561_WT_peak_6477 chr6 134557305 134557500 + 69 NA intron (NM_001143676, intron 2 of 13) intron (NM_001143676, intron 2 of 13) -58392 NM_001143677 6446 Hs.510078 NM_005627 HPRD:04264 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding 0.000000 0.346939 -161(GAAGGAGGGGGA,-,0.00) -2(AAGTGGTT,+,0.00) 561_WT_peak_660 chr1 186708264 186708408 + 69 NA Intergenic MIR|SINE|MIR 58550 NR_125801 103752588 Hs.441636 NR_125801 PACERR PACER|PTGS2-AS1 PTGS2 antisense NFKB1 complex-mediated expression regulator RNA ncRNA 0.000000 0.351724 561_WT_peak_6667 chr7 45151249 45151632 + 69 NA promoter-TSS (NM_199122) promoter-TSS (NM_199122) -94 NM_004749 9238 Hs.231411 NM_004749 HPRD:10263 TBRG4 CPR2|FASTKD4 transforming growth factor beta regulator 4 protein-coding 0.091384 0.622396 -27(GCTTCCGGCCAC,-,0.00) 170(CGTAGGCG,-,0.00) -112(TGCGCGGC,-,0.00) -61(GCCTCGCCCCGC,-,0.00) 561_WT_peak_6092 chr6 7313498 7313728 + 69 NA promoter-TSS (NM_001292008) promoter-TSS (NM_001292008) -66 NM_003144 6745 Hs.114033 NM_003144 HPRD:02924 SSR1 TRAPA signal sequence receptor, alpha protein-coding 0.086957 0.593074 -39(CGACCCGGCAGC,+,0.00) 561_WT_peak_2450 chr15 43425785 43426001 + 69 NA 5' UTR (NM_024956, exon 1 of 14) 5' UTR (NM_024956, exon 1 of 14) 171 NM_024956 80021 Hs.511175 NM_024956 HPRD:08669 TMEM62 - transmembrane protein 62 protein-coding 0.129630 0.764977 -19(AAGCGGCT,+,0.00) -10(CCGGGAGCGCCG,-,0.00),35(CCCGGCGGGCGG,-,0.00),39(GCGGGCGGGCGG,-,0.00) -78(CGGCGCCGGCCC,+,0.00) -157(GGCCAGAGAGGG,-,0.00) -162(TGCGCGGC,-,0.00),-137(TGGGCGGC,-,0.00),10(TGCGCGGG,-,0.00),28(GCCGCGCC,+,0.00) -161(GCGCGGCCAGAG,+,0.00),-75(CGCCGGCCCCGC,-,0.00),-57(CTCTGGCCCTGC,-,0.00) -20(AAAGCGGCTC,-,0.00),26(GGGCCGCGCC,+,0.00) 561_WT_peak_3415 chr18 2644695 2644871 + 69 NA Intergenic Intergenic 10611 NR_033754 645158 Hs.712861 NR_033754 ENSG00000266405 CBX3P2 - chromobox homolog 3 pseudogene 2 pseudo 0.000000 0.355932 -14(AAGTGTCT,+,0.00) 561_WT_peak_4429 chr2 200820556 200820739 + 69 NA promoter-TSS (NR_109905) promoter-TSS (NR_109905) -188 NR_004862 129450 Hs.204619 NM_152382 HPRD:08232 TYW5 C2orf60|hTYW5 tRNA-yW synthesizing protein 5 protein-coding 0.103825 0.690217 -157(TCGGTCGC,-,0.00),-137(CCGTCCGA,+,0.00) -8(CGGCGCTA,+,0.00) -136(CGTCCGAC,+,0.00),-135(GTCCGACT,-,0.00),-95(CGTCGGCC,+,0.00) -22(GGCCTTGGCAGC,-,0.00) 561_WT_peak_2533 chr15 68346671 68346865 + 69 NA intron (NM_016166, intron 1 of 13) CpG 196 NM_016166 8554 Hs.162458 NM_016166 HPRD:16029 PIAS1 DDXBP1|GBP|GU/RH-II|ZMIZ3 protein inhibitor of activated STAT, 1 protein-coding 0.097938 0.692308 -75(GTCCGACC,-,0.00) -109(GCGGAGACGGCG,+,0.00) 8(GGGGCCCGCCTG,+,0.00) 561_WT_peak_1017 chr10 65281311 65281516 + 69 NA intron (NM_001001330, intron 1 of 7) CpG 290 NM_001001330 221035 Hs.499833 NM_001001330 HPRD:16582 REEP3 C10orf74 receptor accessory protein 3 protein-coding 0.073171 0.708738 -109(CGGCGCGA,-,0.00) -79(GGGAAGGAGCCG,+,0.00) 32(CGTCGCTG,+,0.00) 7(CCCTCGGCTTCC,-,0.00) -41(GCGGGGACGGGG,+,0.00) 561_WT_peak_2611 chr15 91498560 91498733 + 69 NA intron (NM_001017919, intron 1 of 7) intron (NM_001017919, intron 1 of 7) 540 NM_033544 91433 Hs.655895 NM_033544 HPRD:18706 RCCD1 - RCC1 domain containing 1 protein-coding 0.069364 0.678161 -163(TCGGCGCC,+,0.00) 561_WT_peak_2458 chr15 44955484 44955763 + 69 NA exon (NM_001160227, exon 1 of 38) exon (NM_001160227, exon 1 of 38) 253 NM_001160227 80208 Hs.656271 NM_025137 HPRD:07963 SPG11 KIAA1840 spastic paraplegia 11 (autosomal recessive) protein-coding 0.064516 0.700000 -11(GGCGTCAA,-,0.00) -29(CCCCCGCC,-,0.00) 53(TGCGCAGC,-,0.00) -18(GCTGCCAGGC,+,0.00) 561_WT_peak_2958 chr16 89788478 89788682 + 69 NA intron (NR_110129, intron 1 of 10) CpG 628 NM_001113525 92822 Hs.290154 NM_152287 HPRD:12235 ZNF276 CENP-Z|CENPZ|ZADT|ZFP276|ZNF477 zinc finger protein 276 protein-coding 0.117647 0.721951 26(GGAGGAGGGTGC,-,0.00) -4(CAGCGCCTGCCC,+,0.00) -81(TCGTGCCC,+,0.00) -142(CGCTGTCACCGC,-,0.00) -72(CGCGGAGCCGGA,+,0.00) 561_WT_peak_3785 chr19 44066917 44067187 + 69 NA intron (NM_006297, intron 2 of 16) MIR|SINE|MIR 12678 NM_006297 7515 Hs.98493 NM_006297 HPRD:01909 XRCC1 RCC X-ray repair complementing defective repair in Chinese hamster cells 1 protein-coding 0.029630 0.512915 62(CGGACCGGAACC,+,0.00) 23(AAGTGGTT,+,0.00) 56(CAAAGCCG,+,0.00) 561_WT_peak_2997 chr17 4981366 4981553 + 69 NA promoter-TSS (NM_153018) promoter-TSS (NM_153018) -295 NM_153018 124961 Hs.48832 NM_153018 HPRD:08705 ZFP3 ZNF752 ZFP3 zinc finger protein protein-coding 0.106952 0.606383 -117(AAGCGGAT,+,0.00) -73(CGACACGA,-,0.00) 561_WT_peak_1012 chr10 64576642 64576832 + 69 NA promoter-TSS (NM_001136177) promoter-TSS (NM_001136177) -611 NM_001136177 1959 Hs.1395 NM_000399 HPRD:00551 EGR2 AT591|CMT1D|CMT4E|KROX20 early growth response 2 protein-coding 0.026316 0.382199 -84(AAGTGGCT,+,0.00) 561_WT_peak_2696 chr16 11146034 11146437 + 69 NA intron (NM_015226, intron 17 of 22) intron (NM_015226, intron 17 of 22) 107890 NM_001243403 23274 Hs.35490 NM_015226 HPRD:17185 CLEC16A Gop-1|KIAA0350 C-type lectin domain family 16, member A protein-coding 0.012407 0.470297 74(CAAAACAG,+,0.00) -106(CGGGTAAG,+,0.00) 561_WT_peak_2262 chr14 65879058 65879396 + 69 NA promoter-TSS (NR_038170) promoter-TSS (NR_038170) 108 NR_024334 645431 Hs.713717 NR_024334 FUT8-AS1 - FUT8 antisense RNA 1 ncRNA 0.106509 0.725664 -1(CGAGCCGGAGCC,+,0.00) -151(CCGACTGA,+,0.00) 58(CCCGCGGC,-,0.00) -52(CCCGCTCAGCCT,+,0.00) 15(TGCGCAGC,-,0.00) 3(CCGGAGCCGGCG,+,0.00) 60(CGCGGCTCTGCT,-,0.00) 70(CTAGGCGG,+,0.00) 561_WT_peak_5424 chr4 15783408 15783608 + 69 NA intron (NM_001775, intron 1 of 7) MLT1H1|LTR|ERVL-MaLR 3577 NM_001775 952 Hs.479214 NM_001775 CD38 ADPRC 1|T10 CD38 molecule protein-coding 0.000000 0.412935 -157(AGGTTTTG,-,0.00),-117(CTGTTTTG,-,0.00) 561_WT_peak_5962 chr5 140105704 140105945 + 69 NA promoter-TSS (NR_026705) promoter-TSS (NR_026705) 80 NR_026705 56662 NR_026705 ENSG00000202515 VTRNA1-3 HVG3|VAULTRC3|VR3|hvg-3 vault RNA 1-3 ncRNA 0.041494 0.491736 561_WT_peak_1847 chr12 110011093 110011312 + 69 NA promoter-TSS (NM_000431) promoter-TSS (NM_000431) 156 NM_052845 326625 Hs.12106 NM_052845 HPRD:07398 MMAB ATR|CFAP23|cblB|cob methylmalonic aciduria (cobalamin deficiency) cblB type protein-coding 0.091324 0.690909 -164(GGCGACGA,-,0.00),-93(TCCACGCC,+,0.00),-43(GGCGCCGA,-,0.00) -31(CCCGCGCA,+,0.00) 29(GAGCCAGGCTGC,-,0.00) 561_WT_peak_1838 chr12 107349089 107349515 + 69 NA promoter-TSS (NM_152261) promoter-TSS (NM_152261) -242 NM_152261 90488 Hs.257664 NM_152261 HPRD:14462 TMEM263 C12orf23 transmembrane protein 263 protein-coding 0.117371 0.695550 92(GCGGGAAGAAGG,-,0.00) 156(GGCGTCCA,-,0.00) 41(CCTACGCG,-,0.00),200(CGCGTGCG,+,0.00) 172(AGGGGCGGGA,-,0.00) 138(GCCGGGGG,+,0.00) -148(AGCAGGCCCCGC,-,0.00),-3(CGCGGGCACCGC,-,0.00) 561_WT_peak_6602 chr7 17980245 17980247 + 69 NA promoter-TSS (NM_015132) promoter-TSS (NM_015132) -115 NM_015132 23161 Hs.487648 NM_015132 HPRD:09418 SNX13 RGS-PX1 sorting nexin 13 protein-coding 0.000000 0.666667 561_WT_peak_5756 chr5 55008248 55008547 + 69 NA promoter-TSS (NM_173514) promoter-TSS (NM_173514) -234 NM_173514 153129 Hs.745105 NM_173514 HPRD:08817 SLC38A9 - solute carrier family 38, member 9 protein-coding 0.066890 0.636667 33(AGCCCCGGAGGC,+,0.00) -14(AGGCTGGGAGGG,-,0.00) 561_WT_peak_4246 chr2 109237562 109237860 + 69 NA promoter-TSS (NM_001193484) promoter-TSS (NM_001193484) 9 NM_001193484 3987 Hs.597715 NM_004987 HPRD:03978 LIMS1 PINCH|PINCH-1|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding 0.013423 0.531773 -155(CCGCTTCCCCCC,-,0.00) -77(GAAACAGGAAGC,+,0.00) -136(GGTGCGAGGC,+,0.00) 561_WT_peak_2583 chr15 85197459 85197677 + 69 NA promoter-TSS (NM_032856) promoter-TSS (NM_032856) -47 NM_032856 84942 Hs.745027 NM_032856 HPRD:08608 WDR73 - WD repeat domain 73 protein-coding 0.100917 0.648402 -3(CGGCCCGGCATG,+,0.00) 40(CGGGAAAA,+,0.00) -27(GGGCGGGGTT,+,0.00) -4(GCGGCCCGGCAT,+,0.00) 561_WT_peak_2420 chr15 34394393 34394532 + 69 NA promoter-TSS (NM_020154) promoter-TSS (NM_020154) 188 NM_152595 161779 Hs.156317 NM_152595 HPRD:17839 PGBD4 - piggyBac transposable element derived 4 protein-coding 0.043165 0.478571 561_WT_peak_4140 chr2 71357579 71357812 + 69 NA promoter-TSS (NM_032601) promoter-TSS (NM_032601) 251 NM_005791 10199 Hs.656208 NM_005791 HPRD:10404 MPHOSPH10 CT90|MPP10|MPP10P|PPP1R106 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) protein-coding 0.090129 0.619658 -89(GGCTGAGGGCGA,-,0.00) 47(ACAGCCATGGCG,+,0.00),49(AGCCATGGCGCC,-,0.00) 561_WT_peak_7439 chr9 131084737 131085169 + 69 NA promoter-TSS (NM_015679) promoter-TSS (NM_015679) 162 NM_016035 51117 Hs.98541 NM_016035 HPRD:16741 COQ4 CGI-92 coenzyme Q4 protein-coding 0.104167 0.607390 -81(AACCGGCT,+,0.00),-19(AGACACTT,-,0.00) -57(GGCCCGGCGCTG,-,0.00) 48(CGCGTGCG,+,0.00),203(CGTACCCG,-,0.00),220(CGCGGACG,+,0.00) 164(CTCCGACG,-,0.00) -84(GAAAACCG,+,0.00),140(CGGTTTTT,-,0.00) -88(CGGGGAAA,+,0.00) -133(GCCGCCATGTTC,+,0.00),231(GCTGCCATGGCG,+,0.00),233(TGCCATGGCGAC,-,0.00) 561_WT_peak_4692 chr20 52323207 52323432 + 69 NA Intergenic Intergenic -123683 NM_006526 7764 Hs.155040 NM_006526 HPRD:04272 ZNF217 ZABC1 zinc finger protein 217 protein-coding 0.000000 0.411504 561_WT_peak_2425 chr15 36871420 36871736 + 69 NA promoter-TSS (NM_001130010) promoter-TSS (NM_001130010) -226 NM_001290233 84529 Hs.48348 NM_032499 HPRD:13650 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding 0.072785 0.602524 127(GGCGCGGC,-,0.00) 23(GCCGCCCTGGCT,+,0.00) 561_WT_peak_4044 chr2 43358624 43358854 + 69 NA Intergenic Intergenic -92057 NR_110585 102723854 Hs.570165 NR_110585 LOC102723854 - uncharacterized LOC102723854 ncRNA 0.021739 0.593074 -118(CAACACCG,+,0.00) 561_WT_peak_5333 chr3 179281191 179281458 + 69 NA intron (NM_178042, intron 1 of 13) CpG 616 NM_178042 86 Hs.435326 NM_004301 HPRD:05389 ACTL6A ACTL6|ARPN-BETA|Arp4|BAF53A|INO80K actin-like 6A protein-coding 0.086142 0.679104 -136(GCCGCCGGGCCC,-,0.00) -164(GGGCTGGGCGGG,-,0.00) -135(CCGCCGGGCCCC,-,0.00) 561_WT_peak_4979 chr22 50977606 50978639 + 69 NA Intergenic MER57F|LTR|ERV1 -7114 NM_001014440 440836 Hs.531314 NM_001014440 HPRD:18640 ODF3B ODF3L3 outer dense fiber of sperm tails 3B protein-coding 0.021297 0.475822 646(GGAGGCCGAG,+,0.00) 52(AGGCGTCT,+,0.00) 748(CGCGTACC,+,0.00) 34(CTCCGACG,-,0.00) 304(CAAAACCA,+,0.00) -59(TGGGTAAA,+,0.00) 767(CTACTCGG,+,0.00) 561_WT_peak_4068 chr2 54308846 54309068 + 69 NA Intergenic Intergenic -33453 NM_138448 98 Hs.516173 NM_138448 HPRD:00028 ACYP2 ACYM|ACYP acylphosphatase 2, muscle type protein-coding 0.013514 0.524664 561_WT_peak_5851 chr5 90677057 90677378 + 69 NA intron (NR_027435, intron 1 of 2) intron (NR_027435, intron 1 of 2) 1053 NR_027435 100129716 Hs.116364 NR_027435 ARRDC3-AS1 - ARRDC3 antisense RNA 1 ncRNA 0.012461 0.363354 561_WT_peak_4574 chr20 18269012 18269362 + 69 NA exon (NM_001283007, exon 1 of 3) exon (NM_001283007, exon 1 of 3) 260 NM_001283008 7692 Hs.472221 NM_003434 HPRD:04964 ZNF133 ZNF150|pHZ-13|pHZ-66 zinc finger protein 133 protein-coding 0.082857 0.655271 -57(GGCGCCGA,-,0.00) 25(GCTCCCCAGC,-,0.00) 561_WT_peak_5991 chr5 154237178 154237349 + 69 NA promoter-TSS (NM_001301074) promoter-TSS (NM_001301074) -546 NM_001301083 9337 Hs.26703 NM_004779 HPRD:07225 CNOT8 CAF1|CALIF|Caf1b|POP2|hCAF1 CCR4-NOT transcription complex, subunit 8 protein-coding 0.064327 0.627907 -11(GCGACGCC,+,0.00) -47(CGCGTCCG,+,0.00) 561_WT_peak_5041 chr3 27794610 27794757 + 69 NA Intergenic HAL1|LINE|L1 -30477 NM_001278183 8320 Hs.591663 NM_005442 HPRD:07054 EOMES TBR2 eomesodermin protein-coding 0.000000 0.405405 561_WT_peak_1829 chr12 102591695 102591855 + 69 NA promoter-TSS (NM_002674) promoter-TSS (NM_002674) -161 NM_002674 5367 Hs.707990 NM_002674 HPRD:01459 PMCH MCH pro-melanin-concentrating hormone protein-coding 0.000000 0.341615 561_WT_peak_4273 chr2 114647318 114647605 + 69 NA promoter-TSS (NR_102318) promoter-TSS (NR_102318) -50 NR_102318 10096 Hs.433512 NM_005721 HPRD:05024 ACTR3 ARP3 ARP3 actin-related protein 3 homolog (yeast) protein-coding 0.069686 0.649306 36(GGCGTCGG,-,0.00) 67(CGGGGAAA,+,0.00) -10(CGGAGCGGAAGG,+,0.00) 561_WT_peak_3616 chr19 10399833 10400029 + 69 NA promoter-TSS (NM_003259) promoter-TSS (NM_003259) -724 NM_003259 7087 Hs.465862 NM_003259 HPRD:03509 ICAM5 TLCN|TLN intercellular adhesion molecule 5, telencephalin protein-coding 0.076531 0.629442 -157(GGGCCCGGAAGC,+,0.00),6(AGACCCGGAGCC,+,0.00) -89(CCCACCGA,+,0.00) -5(TGGGTAAA,+,0.00) 9(CCCGGAGCCGAG,+,0.00) 561_WT_peak_6123 chr6 20543515 20543803 + 69 NA intron (NM_017774, intron 2 of 15) L1MD1|LINE|L1 8971 NM_017774 54901 Hs.657604 NM_017774 HPRD:13022 CDKAL1 - CDK5 regulatory subunit associated protein 1-like 1 protein-coding 0.006944 0.363322 15(CGGTTGTG,-,0.00) 561_WT_peak_4710 chr20 58515933 58516001 + 69 NA promoter-TSS (NM_006242) promoter-TSS (NM_006242) 523 NM_001190827 63939 Hs.54973 NM_022106 HPRD:12758 FAM217B C20orf177|dJ551D2.5 family with sequence similarity 217, member B protein-coding 0.044118 0.565217 -104(ATTACCCG,-,0.00) 561_WT_peak_3320 chr17 66031884 66032182 + 68 NA intron (NM_002266, intron 1 of 10) CpG 185 NM_002266 3838 Hs.594238 NM_002266 HPRD:02818 KPNA2 IPOA1|QIP2|RCH1|SRP1alpha karyopherin alpha 2 (RAG cohort 1, importin alpha 1) protein-coding 0.120805 0.698997 63(GGCGGCTGAG,+,0.00) -57(AACGGCTT,-,0.00),62(AGGCGGCT,+,0.00) -1(TCCACGCC,+,0.00),96(GGCGCCGA,-,0.00) -73(GCCCGGCCCG,+,0.00) -70(CGGCCCGA,-,0.00) -44(TGGGCGGC,-,0.00) 77(GCGGGGTCTGCG,+,0.00) -43(GGGCGGCGTT,+,0.00) -100(GCTTCGCAGG,-,0.00) -76(GCGGCCCGGCCC,+,0.00) 561_WT_peak_6907 chr7 152161156 152161373 + 68 NA promoter-TSS (NR_027387) promoter-TSS (NR_027387) 55 NR_027387 100128822 Hs.647112 NR_027387 ENSG00000261455 LINC01003 - long intergenic non-protein coding RNA 1003 ncRNA 0.138249 0.752294 -23(CTCCGCCGCC,-,0.00) 9(GCGGCTTCCCGG,+,0.00) 32(CCGACCGT,+,0.00) 44(TCCCGGCCCG,+,0.00) -105(CCCCCGCC,-,0.00) 8(CGCGGCTTCCCG,-,0.00) 19(GGGCGGCTCT,+,0.00) 561_WT_peak_5001 chr3 11314045 11314279 + 68 NA intron (NM_001144912, intron 1 of 16) intron (NM_001144912, intron 1 of 16) 152 NM_001144912 10533 Hs.38032 NM_006395 HPRD:12293 ATG7 APG7-LIKE|APG7L|GSA7 autophagy related 7 protein-coding 0.081197 0.668085 -79(GGCGGGCGAG,+,0.00) -46(CGGTTTTG,-,0.00) -158(GGACCGCGTT,+,0.00),-50(GGGCCGGTTT,+,0.00) 561_WT_peak_6312 chr6 37257835 37258238 + 68 NA intron (NM_017772, intron 7 of 12) intron (NM_017772, intron 7 of 12) -32105 NM_001162900 221468 Hs.520101 NM_145316 HPRD:12848 TMEM217 C6orf128|dJ355M6.2 transmembrane protein 217 protein-coding 0.002481 0.482673 561_WT_peak_7624 chrX 152200716 152201019 + 68 NA Intergenic Intergenic -23899 NM_013364 29944 Hs.449627 NM_013364 HPRD:06677 PNMA3 MA3|MA5 paraneoplastic Ma antigen 3 protein-coding 0.085809 0.595395 -102(CGCGTGCG,+,0.00),-100(CGTGCGCG,-,0.00) 125(CCGACTAG,-,0.00) 561_WT_peak_1096 chr10 93704806 93704982 + 68 NA intron (NM_003972, intron 4 of 37) L1MB8|LINE|L1 21158 NM_003972 9044 Hs.500526 NM_003972 HPRD:05546 BTAF1 MOT1|TAF(II)170|TAF172|TAFII170 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa protein-coding 0.011364 0.350282 -85(ATGTGGCT,+,0.00) -79(CTGGTAAA,+,0.00) 561_WT_peak_6261 chr6 30312985 30313158 + 68 NA intron (NM_024839, intron 1 of 4).6 CpG 165 NM_001199121 79897 Hs.183232 NM_024839 HPRD:15275 RPP21 C6orf135|CAT60 ribonuclease P/MRP 21kDa subunit protein-coding 0.063584 0.637931 -74(GCCGCCCA,+,0.00) -81(CCCGCAGGCCGC,-,0.00) 561_WT_peak_578 chr1 160653133 160653307 + 68 NA intron (NM_001256030, intron 2 of 2) MER63D|DNA|hAT-Blackjack 28421 NM_001256030 962 Hs.243564 NM_001778 HPRD:00177 CD48 BCM1|BLAST|BLAST1|MEM-102|SLAMF2|hCD48|mCD48 CD48 molecule protein-coding 0.005747 0.382857 561_WT_peak_7609 chrX 123096930 123097168 + 68 NA intron (NM_001282418, intron 2 of 33) intron (NM_001282418, intron 2 of 33) 1493 NM_006603 10735 Hs.496710 NM_006603 HPRD:05077 STAG2 SA-2|SA2|SCC3B|bA517O1.1 stromal antigen 2 protein-coding 0.054622 0.577406 -118(GGCGGGGG,+,0.00) 561_WT_peak_1631 chr12 26901817 26901995 + 68 NA intron (NM_002223, intron 2 of 56) intron (NM_002223, intron 2 of 56) 84225 NM_002223 3709 Hs.512235 NM_002223 HPRD:02536 ITPR2 CFAP48|IP3R2 inositol 1,4,5-trisphosphate receptor, type 2 protein-coding 0.016854 0.329609 -73(CAAAACCT,+,0.00) 561_WT_peak_4390 chr2 190305530 190305680 + 68 NA promoter-TSS (NM_032168) promoter-TSS (NM_032168) -554 NM_032168 84128 Hs.399984 NM_032168 HPRD:07775 WDR75 NET16|UTP17 WD repeat domain 75 protein-coding 0.040000 0.536424 561_WT_peak_4384 chr2 181988460 181988880 + 68 NA Intergenic Intergenic 142819 NM_001278554 10477 Hs.470804 NM_006357 HPRD:05000 UBE2E3 UBCH9|UbcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding 0.004762 0.408551 561_WT_peak_3851 chr19 49838816 49839153 + 68 NA exon (NM_001774, exon 2 of 8) exon (NM_001774, exon 2 of 8) 307 NM_001774 951 Hs.166556 NM_001774 HPRD:01053 CD37 GP52-40|TSPAN26 CD37 molecule protein-coding 0.029674 0.612426 -6(CTCGGCAGCC,-,0.00) 71(GGGCTGGGGCAG,-,0.00) 561_WT_peak_3366 chr17 76355438 76355623 + 68 NA promoter-TSS (NR_110847) promoter-TSS (NR_110847) 630 NM_003955 9021 Hs.527973 NM_003955 HPRD:05006 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding 0.091892 0.725806 561_WT_peak_611 chr1 169013692 169013779 + 68 NA intron (NR_104091, intron 3 of 4) intron (NR_104091, intron 3 of 4) 42508 NR_104091 101978719 Hs.517849 NR_104091 LINC00970 - long intergenic non-protein coding RNA 970 ncRNA 0.011494 0.500000 561_WT_peak_3072 chr17 19551575 19551959 + 68 NA promoter-TSS (NM_000382) promoter-TSS (NM_000382) -297 NM_000382 224 Hs.499886 NM_000382 HPRD:07188 ALDH3A2 ALDH10|FALDH|SLS aldehyde dehydrogenase 3 family, member A2 protein-coding 0.078125 0.685714 48(GCGCCCTCCGCC,+,0.00),54(TCCGCCTGCTCC,+,0.00) -129(AGGAAGGAGCAG,+,0.00) 174(CGCTCGGCTCCC,-,0.00) 561_WT_peak_4708 chr20 57739064 57739182 + 68 NA Intergenic Intergenic -26952 NM_178457 128611 Hs.473204 NM_178457 ENSG00000124203 ZNF831 C20orf174|dJ492J12.1 zinc finger protein 831 protein-coding 0.016949 0.554622 -149(CCCTCTCAGCAA,+,0.00) -78(GTGGGGCCAGCC,+,0.00) 561_WT_peak_2464 chr15 45020508 45020979 + 68 NA promoter-TSS (NR_125376) promoter-TSS (NR_125376) -443 NR_125376 100419583 Hs.489254 NR_125376 LOC100419583 - ring finger protein 4 pseudogene pseudo 0.025478 0.516949 113(CTCGGCCTCC,-,0.00) 155(CGCCCGGC,-,0.00) 561_WT_peak_4488 chr2 231526456 231526767 + 68 NA Intergenic MLT1B|LTR|ERVL-MaLR 38633 NR_040038 151475 Hs.528154 NR_040038 ENSG00000226125 LOC151475 - uncharacterized LOC151475 ncRNA 0.006431 0.480769 561_WT_peak_1186 chr11 1968560 1968751 + 68 NA intron (NM_021134, intron 1 of 4) CpG 153 NM_021134 6150 Hs.3254 NM_021134 HPRD:02876 MRPL23 L23MRP|RPL23|RPL23L mitochondrial ribosomal protein L23 protein-coding 0.130890 0.760417 -38(GACTCCGGGGAG,-,0.00) -12(CTGGGCCGCC,-,0.00) -34(CCGGGGAGCGGG,-,0.00) -91(CGTCGCGG,+,0.00) -137(GCCGCCATGGCG,+,0.00),-135(CGCCATGGCGCG,-,0.00) 561_WT_peak_1483 chr11 111749876 111750134 + 68 NA promoter-TSS (NM_022761) promoter-TSS (NM_022761) 57 NM_022761 64776 Hs.17546 NM_022761 HPRD:12601 C11orf1 - chromosome 11 open reading frame 1 protein-coding 0.077519 0.563707 48(AAGTGTCT,+,0.00),76(AGCGACTT,-,0.00) -41(CCGACTCCCCGG,+,0.00) -96(CGTCACTA,+,0.00) -118(CTCTCTCCGCCC,+,0.00),23(CCCTTTCACCCC,+,0.00) -77(ACCCATGGCGCC,-,0.00) 561_WT_peak_4750 chr21 16197873 16198138 + 68 NA Intergenic Intergenic -182577 NM_001256579 388813 Hs.334177 NM_001256579 LOC388813 - uncharacterized protein ENSP00000383407-like protein-coding 0.007547 0.349624 561_WT_peak_6364 chr6 64346292 64346567 + 68 NA promoter-TSS (NM_001290260) promoter-TSS (NM_001290260) 43 NM_001290260 23469 Hs.348921 NM_015153 HPRD:08477 PHF3 - PHD finger protein 3 protein-coding 0.105455 0.739130 -40(CGGCGGGCGCTG,-,0.00) -140(AGGGTCGGGA,-,0.00) -162(CAGCGACG,-,0.00) -71(CGCTGAGGCGCG,+,0.00) -159(CGACGCGG,+,0.00) 79(GGCCCTGGCTGC,-,0.00) -163(GCAGCGACGC,+,0.00),-92(GCTGCGAGGG,+,0.00),-81(GCCCCGCCGC,-,0.00) 561_WT_peak_449 chr1 145759430 145759680 + 68 NA intron (NM_002614, intron 7 of 9) intron (NM_002614, intron 7 of 9) 31889 NM_001201326 5174 Hs.444751 NM_002614 HPRD:04829 PDZK1 CAP70|CLAMP|NHERF-3|NHERF3|PDZD1 PDZ domain containing 1 protein-coding 0.004000 0.398406 561_WT_peak_4158 chr2 75873886 75874123 + 68 NA promoter-TSS (NM_014763) promoter-TSS (NM_014763) 95 NM_014763 9801 Hs.44024 NM_014763 MRPL19 L19mt|MRP-L15|MRP-L19|MRPL15|RLX1|RPML15 mitochondrial ribosomal protein L19 protein-coding 0.063291 0.655462 -57(AGCCGCCA,-,0.00) -38(CCCCCGCC,-,0.00) -164(CGTCGCAC,+,0.00) 12(GGGGCGCGTT,+,0.00) -120(TGGCATGGCGGC,-,0.00) -101(GCAGCGGGGC,+,0.00) 561_WT_peak_6654 chr7 44058624 44058831 + 68 NA promoter-TSS (NR_003655) promoter-TSS (NR_003655) 21 NR_003655 84820 Hs.657028 NM_032734 ENSG00000214783 POLR2J4 RPB11-phi polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene pseudo 0.120773 0.663462 -47(AAGTGTCT,+,0.00),-12(AGAGGCCT,-,0.00),-10(AGGCCTCT,+,0.00) 18(CAAACCCG,+,0.00) 22(CCCGCGCA,+,0.00) -159(ACCTCGGCCC,-,0.00) 561_WT_peak_3613 chr19 9785589 9785633 + 68 NA intron (NM_001300885, intron 1 of 5) CpG 165 NM_001300885 54811 Hs.371107 NM_017656 HPRD:15844 ZNF562 - zinc finger protein 562 protein-coding 0.068182 0.622222 -157(CTAGGCGG,+,0.00) 561_WT_peak_1927 chr12 132628924 132629124 + 68 NA promoter-TSS (NM_175066) promoter-TSS (NM_175066) 31 NM_024078 79050 Hs.558536 NM_024078 HPRD:14543 NOC4L NET49|NOC4|UTP19 nucleolar complex associated 4 homolog (S. cerevisiae) protein-coding 0.150000 0.726368 -93(GGCGGCTGAG,+,0.00),-15(CTGGGCCGCC,-,0.00) -43(GCCGGGCG,+,0.00),-36(GCCGCGGG,+,0.00) 561_WT_peak_6744 chr7 89975900 89976365 + 68 NA intron (NM_001042717, intron 1 of 7) intron (NM_001042717, intron 1 of 7) 153 NM_033107 85865 Hs.593547 NM_033107 HPRD:14262 GTPBP10 ObgH2 GTP-binding protein 10 (putative) protein-coding 0.060215 0.585837 -158(GGCGCCCGAG,+,0.00) -50(TTGTGCCG,+,0.00),109(TCGTGGCG,+,0.00) 110(CGTGGCGG,+,0.00) -14(GCAGCCATGGTG,+,0.00) 561_WT_peak_4500 chr2 234240160 234240370 + 68 NA intron (NM_000541, intron 9 of 15) intron (NM_000541, intron 9 of 15) -22888 NM_152879 8527 Hs.471675 NM_003648 HPRD:03492 DGKD DGKdelta|dgkd-2 diacylglycerol kinase, delta 130kDa protein-coding 0.042857 0.578199 14(CGTGGCTA,+,0.00) 561_WT_peak_1234 chr11 22851015 22851364 + 68 NA intron (NM_148893, intron 1 of 3) CpG 193 NM_148893 258010 Hs.349096 NM_148893 SVIP - small VCP/p97-interacting protein protein-coding 0.100287 0.671429 -114(AGGTCGCT,+,0.00) 82(CGGACTCCCCGG,+,0.00) -67(CCTCGCTA,+,0.00),115(TAGGGACG,-,0.00),162(CGGCGCTA,+,0.00) 33(CGGCGGAC,+,0.00),65(GTCCGGCG,-,0.00) 24(GGCGCGGC,-,0.00),172(TGCGCGGT,-,0.00) -9(GGCCCGCCCCGC,-,0.00) 26(CGCGGCCCGGCG,-,0.00) -14(GGCTCGGCCC,-,0.00),24(GGCGCGGCCC,-,0.00) 27(GCGGCCCGGCGG,+,0.00) 561_WT_peak_2258 chr14 65222659 65222831 + 68 NA intron (NM_001024858, intron 31 of 34) LTR60|LTR|ERV1 29659 NR_107009 102465841 NR_107009 MIR7855 hsa-mir-7855 microRNA 7855 ncRNA 0.023256 0.514451 561_WT_peak_1080 chr10 88731137 88731327 + 68 NA TTS (NM_006829) TTS (NM_006829) 734 NM_133447 119385 Hs.511787 NM_133447 AGAP11 - ankyrin repeat and GTPase domain Arf GTPase activating protein 11 protein-coding 0.094737 0.659686 -134(CGTGCGCG,-,0.00),-124(CGCGTGCG,+,0.00) -10(CCCCCGGC,-,0.00) -6(CGGCACGT,-,0.00) -155(CGGTTGTG,-,0.00),-55(AGGTTTTG,-,0.00) -132(TGCGCGCT,-,0.00) 561_WT_peak_860 chr10 5931716 5931975 + 68 NA promoter-TSS (NM_019046) promoter-TSS (NM_019046) 15 NM_001009943 54522 Hs.289828 NM_019046 HPRD:12459 ANKRD16 - ankyrin repeat domain 16 protein-coding 0.111969 0.757692 30(CTCGACCGCC,-,0.00) -125(CCGGGAGGGCGC,-,0.00) -7(GGGCCGGCGTTC,-,0.00) -47(CGCACGCG,-,0.00) -104(CGCCCGGC,-,0.00) -159(CGCCGCTA,+,0.00) 16(CCCCGTCCCCGC,-,0.00) 39(CGCTGCTCCGCG,-,0.00) 8(GGCTCCGCCC,-,0.00) -73(CAGCCAGGCCCA,-,0.00) 561_WT_peak_1692 chr12 50478784 50478959 + 68 NA promoter-TSS (NM_003076) promoter-TSS (NM_003076) -112 NM_139071 6602 Hs.79335 NM_003076 HPRD:03438 SMARCD1 BAF60A|CRACD1|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 protein-coding 0.051429 0.613636 -61(CGTCGGCC,+,0.00) 561_WT_peak_5719 chr5 43008162 43008672 + 68 NA Intergenic Intergenic 10496 NR_034086 648987 Hs.649468 NR_034085 ENSG00000177738 LOC648987 - uncharacterized LOC648987 ncRNA 0.050980 0.540117 -19(GAGCCCAAGCCC,+,0.00),51(GACAGCCAGCCC,+,0.00) 74(CGGCGCTA,+,0.00) 36(GGGCTGAGACCG,-,0.00) -26(AAAAACCG,+,0.00) 62(CGGGGAAA,+,0.00),327(TTCACCCG,-,0.00) 53(CAGCCAGCCCGG,-,0.00) 561_WT_peak_1740 chr12 58088028 58088191 + 68 NA intron (NM_001261423, intron 1 of 12) intron (NM_001261423, intron 1 of 12) 371 NM_001261421 10956 Hs.527861 NM_006812 HPRD:17804 OS9 ERLEC2|OS-9 osteosarcoma amplified 9, endoplasmic reticulum lectin protein-coding 0.049080 0.603659 -114(TCCTGCCG,+,0.00) -42(CGGGTAAG,+,0.00) 561_WT_peak_132 chr1 27226679 27226902 + 68 NA exon (NM_022078, exon 1 of 7) exon (NM_022078, exon 1 of 7) 172 NM_022078 63906 Hs.10903 NM_022078 HPRD:07772 GPATCH3 GPATC3 G patch domain containing 3 protein-coding 0.085202 0.616071 -92(AGCGGCCT,-,0.00) -122(TGGGTCGG,-,0.00),-118(TCGGTAGG,-,0.00) -75(CCCGCTCAGGCC,+,0.00) 46(CAGGTAAA,+,0.00) -105(GGGCAGAGTT,+,0.00) -24(CTTCTCGG,+,0.00) 561_WT_peak_6480 chr6 135335572 135335823 + 67 NA intron (NM_001145158, intron 3 of 16) intron (NM_001145158, intron 3 of 16) -35127 NR_037435 100500880 NR_037435 MIR3662 - microRNA 3662 ncRNA 0.011952 0.365079 561_WT_peak_7363 chr9 98783307 98783552 + 67 NA non-coding (NR_024129, exon 2 of 2) non-coding (NR_024129, exon 2 of 2) 608 NR_024129 100188953 Hs.434310 NR_024129 ENSG00000225194 LINC00092 NCRNA00092|bA346B7.1 long intergenic non-protein coding RNA 92 ncRNA 0.130612 0.731707 -20(AGGCGGCT,+,0.00) 19(CCCGCGGC,-,0.00) -159(GCGCCGCCGC,-,0.00),22(GCGGCGGGGC,+,0.00) 561_WT_peak_1254 chr11 36310778 36310938 + 67 NA intron (NM_014186, intron 1 of 5) MIR3|SINE|MIR 141 NM_001101653 29099 Hs.279836 NM_014186 COMMD9 - COMM domain containing 9 protein-coding 0.025000 0.546584 -55(CGCTGTCCCCAC,-,0.00) 561_WT_peak_5109 chr3 50274572 50274822 + 67 NA intron (NM_001282618, intron 1 of 7) intron (NM_001282618, intron 1 of 7) 1108 NM_001282618 2771 Hs.77269 NM_002070 HPRD:00764 GNAI2 GIP|GNAI2B|H_LUCA15.1|H_LUCA16.1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 protein-coding 0.020000 0.633466 561_WT_peak_5247 chr3 128837753 128837976 + 67 NA intron (NM_001204890, intron 11 of 12) L1ME1|LINE|L1 2783 NM_198490 339122 Hs.381132 NM_198490 HPRD:17947 RAB43 RAB11B|RAB41 RAB43, member RAS oncogene family protein-coding 0.008969 0.410714 -25(ATGTGGCT,+,0.00) 561_WT_peak_723 chr1 212731961 212732343 + 67 NA Intergenic CpG -6524 NM_001030287 467 Hs.460 NM_001674 HPRD:04395 ATF3 - activating transcription factor 3 protein-coding 0.112565 0.691906 197(CGTGCGCG,-,0.00) 37(CGGGCCGGGC,-,0.00) 211(GGCGGGGG,+,0.00) 36(TCGGGCCG,+,0.00) 178(CCCGCGCA,+,0.00) 203(CGCGGCCCGGCG,-,0.00) -57(GGGCGGGGTT,+,0.00) 108(CCGCCTCG,-,0.00) 204(GCGGCCCGGCGG,+,0.00) 561_WT_peak_1227 chr11 18343793 18344085 + 67 NA promoter-TSS (NM_181507) promoter-TSS (NM_181507) 123 NM_005316 2965 Hs.577202 NM_005316 HPRD:01807 GTF2H1 BTF2|P62|TFB1|TFIIH general transcription factor IIH, polypeptide 1, 62kDa protein-coding 0.106164 0.679181 94(GGCGGCCGCG,+,0.00) -50(GGCGCCGA,-,0.00) -144(CCCCTCCTTCCG,-,0.00) -122(CCCCCTCAGGCC,+,0.00) 88(TGTCATGGCGGC,-,0.00) 12(CCTTCGCCGC,-,0.00) 561_WT_peak_6976 chr8 37707314 37707570 + 67 NA promoter-TSS (NM_018310) promoter-TSS (NM_018310) -11 NM_018310 55290 Hs.709301 NM_018310 BRF2 BRFU|TFIIIB50 BRF2, RNA polymerase III transcription initiation factor 50 kDa subunit protein-coding 0.066406 0.626459 -71(CCCCGTCTTCCG,-,0.00) -162(CAAAGCCG,+,0.00) 18(CGGGTAGA,+,0.00) -26(GCTGGGAGGC,+,0.00) 561_WT_peak_6421 chr6 106968647 106969005 + 67 NA exon (NM_001624, exon 2 of 20) exon (NM_001624, exon 2 of 20) 9096 NM_001624 202 Hs.724262 NM_001624 HPRD:18576 AIM1 CRYBG1|ST4 absent in melanoma 1 protein-coding 0.027933 0.470752 143(GCCCCGCCCT,+,0.00) 561_WT_peak_3831 chr19 48866966 48867028 + 67 NA promoter-TSS (NM_012451) promoter-TSS (NM_012451) 189 NM_018273 55260 Hs.351335 NM_018273 HPRD:08556 TMEM143 - transmembrane protein 143 protein-coding 0.016129 0.587302 561_WT_peak_6260 chr6 30294495 30294677 + 67 NA promoter-TSS (NM_021253) promoter-TSS (NM_021253) -35 NM_021253 56658 Hs.413493 NM_021253 HPRD:09298 TRIM39 RNF23|TFP|TRIM39B tripartite motif containing 39 protein-coding 0.087912 0.672131 -100(CAGCCCTCCTCC,+,0.00),-97(CCCTCCTCCTCC,+,0.00) -57(CGCGGCCGCC,-,0.00) -159(AGCCACCT,-,0.00) -106(CATCGCCAGCCC,+,0.00) -89(CTCCTTCTTCCG,-,0.00) -13(GGCGCGGC,-,0.00) -79(CGCAGGCACCGC,-,0.00) 561_WT_peak_7585 chrX 77166256 77166427 + 67 NA intron (NR_104109, intron 1 of 9) intron (NR_104109, intron 1 of 9) 188 NR_104109 538 Hs.496414 NM_000052 HPRD:02054 ATP7A DSMAX|MK|MNK|SMAX3 ATPase, Cu++ transporting, alpha polypeptide protein-coding 0.046784 0.517442 -158(TGCGTACG,+,0.00),-156(CGTACGTG,-,0.00) 561_WT_peak_3514 chr18 57026079 57026385 + 67 NA intron (NM_005570, intron 1 of 12) CpG 276 NM_005570 3998 Hs.465295 NM_005570 HPRD:03338 LMAN1 ERGIC-53|ERGIC53|F5F8D|FMFD1|MCFD1|MR60|gp58 lectin, mannose-binding, 1 protein-coding 0.084967 0.674267 50(CGTCGCTC,+,0.00) -32(GGCAGCAGAAGG,+,0.00) -12(AACCCGGCCC,-,0.00) 561_WT_peak_5353 chr3 186848363 186848599 + 67 NA intron (NM_052969, intron 1 of 2) MSTA|LTR|ERVL-MaLR 8782 NM_052969 116832 Hs.647900 NM_052969 HPRD:09610 RPL39L RPL39L1 ribosomal protein L39-like protein-coding 0.000000 0.375527 561_WT_peak_4572 chr20 18118362 18118690 + 67 NA promoter-TSS (NM_001164811) promoter-TSS (NM_001164811) 27 NM_001164811 100303755 Hs.488051 NM_001164811 ENSG00000149474 PET117 CSRP2BP PET117 homolog (S. cerevisiae) protein-coding 0.112805 0.714286 55(CGCGGCCGCC,-,0.00) -25(GGGGTCGA,-,0.00) -46(CGGCTGGGGCTC,-,0.00) -55(CGCACGCG,-,0.00) 32(TCGGGCGG,-,0.00) -74(GCCTGGCAGC,-,0.00) 561_WT_peak_3622 chr19 10908309 10908773 + 67 NA intron (NM_001005361, intron 10 of 20) intron (NM_001005361, intron 10 of 20) 17611 NR_039903 100616425 NR_039903 MIR4748 - microRNA 4748 ncRNA 0.021552 0.537634 -85(CCGTGGGGGCGG,-,0.00) 15(CAAAACAG,+,0.00) 100(TTTCCCCG,-,0.00) 105(CCGACTCG,-,0.00) 561_WT_peak_2107 chr13 113951827 113952171 + 67 NA intron (NM_005561, intron 1 of 8) intron (NM_005561, intron 1 of 8) 530 NM_005561 3916 Hs.494419 NM_005561 HPRD:01076 LAMP1 CD107a|LAMPA|LGP120 lysosomal-associated membrane protein 1 protein-coding 0.078488 0.660870 -113(GGCGGGGG,+,0.00) -141(GGCGGAGCCGAG,+,0.00) -142(GGGCGGAGCC,+,0.00) -164(GGGGCCTGGGAG,+,0.00) 561_WT_peak_3975 chr2 17935201 17935379 + 67 NA promoter-TSS (NM_001142286) promoter-TSS (NM_001142286) 113 NM_182625 348654 Hs.467793 NM_182625 HPRD:08813 GEN1 Gen GEN1 Holliday junction 5' flap endonuclease protein-coding 0.084270 0.642458 -89(CCCCCGGC,-,0.00) -161(GGCGGCTCCGCA,-,0.00) -157(GCTCCGCAGT,-,0.00) 561_WT_peak_5064 chr3 40350883 40351174 + 67 NA promoter-TSS (NM_005875) promoter-TSS (NM_005875) -145 NM_005875 10289 Hs.315230 NM_005875 HPRD:17032 EIF1B GC20 eukaryotic translation initiation factor 1B protein-coding 0.099656 0.660959 14(CTCGGCCGCC,-,0.00) -138(AGACGCTT,-,0.00) -89(GAGCCCCAGACC,+,0.00) 22(CCCCCGGC,-,0.00),109(GCCGCGGG,+,0.00) 119(CGGCTAAA,+,0.00) 115(GGCGCGGC,-,0.00) -67(GGGCCGCTCT,+,0.00) -42(CTTCGCGG,+,0.00) 561_WT_peak_7036 chr8 66546494 66546752 + 67 NA promoter-TSS (NM_018120) promoter-TSS (NM_018120) -171 NM_018120 55156 Hs.269542 NM_018120 HPRD:16506 ARMC1 Arcp armadillo repeat containing 1 protein-coding 0.027132 0.474903 39(GTGGGGCCAGCA,+,0.00) 561_WT_peak_5120 chr3 52279928 52280183 + 67 NA promoter-TSS (NM_001122870) promoter-TSS (NM_001122870) -131 NM_001122870 132160 Hs.373560 NM_144641 HPRD:12350 PPM1M PP2C-eta|PP2CE|PP2Ceta protein phosphatase, Mg2+/Mn2+ dependent, 1M protein-coding 0.109804 0.742188 -117(GGCGGCCGAC,+,0.00) -112(CCGACGCC,+,0.00) -132(CAGCTCCAGCCC,+,0.00) -163(CCTACCGA,+,0.00) -89(TCCCGGCCCG,+,0.00),1(AGGCCCGGGC,-,0.00),3(GCCCGGGCCT,+,0.00) -104(TCGCGCCG,+,0.00),-70(CCGCACGA,-,0.00) -150(CCGCTTCCTTCG,-,0.00),47(CGGGAGGAGCTG,+,0.00) -161(TACCGACG,-,0.00) -114(GGCCGACG,-,0.00) -100(GCCGCCCA,+,0.00),-79(TGCGCAGC,-,0.00) -158(CGACGGCCCCGC,-,0.00) -143(CTTCGCGG,+,0.00),35(CCGCCTAG,-,0.00) 561_WT_peak_730 chr1 217804201 217804393 + 67 NA promoter-TSS (NM_138796) promoter-TSS (NM_138796) 147 NM_018040 55105 Hs.362343 NM_018040 HPRD:07657 GPATCH2 CT110|GPATC2|PPP1R30 G patch domain containing 2 protein-coding 0.078125 0.668394 -32(GGCCTCGA,-,0.00) -79(TCGGTTGG,-,0.00) -71(CGCCCGGC,-,0.00) 561_WT_peak_869 chr10 6515481 6515746 + 67 NA intron (NM_001282644, intron 12 of 17) intron (NM_001282644, intron 12 of 17) 106650 NM_001282644 5588 Hs.498570 NM_006257 HPRD:02710 PRKCQ PRKCT|nPKC-theta protein kinase C, theta protein-coding 0.018868 0.421053 -127(AGAGGCTT,-,0.00) 561_WT_peak_2944 chr16 87929310 87929575 + 67 NA intron (NM_001739, intron 5 of 6) L1ME1|LINE|L1 -26342 NM_003486 8140 Hs.513797 NM_003486 HPRD:02552 SLC7A5 4F2LC|CD98|D16S469E|E16|LAT1|MPE16|hLAT1 solute carrier family 7 (amino acid transporter light chain, L system), member 5 protein-coding 0.022642 0.526316 -163(CCCCCGCC,-,0.00) 48(GGGCTGTGAAGG,-,0.00) -68(CGCTTTTG,-,0.00) 561_WT_peak_3053 chr17 16439083 16439417 + 67 NA Intergenic CpG 33270 NM_020653 57336 Hs.99724 NM_020653 ZNF287 ZKSCAN13|ZSCAN45 zinc finger protein 287 protein-coding 0.062874 0.614925 102(CCGTCTCAGCCA,+,0.00) -153(TGCGCAGC,-,0.00),151(ACCGCGCC,+,0.00) -76(CGAGGCGG,+,0.00) 561_WT_peak_378 chr1 111746859 111747127 + 67 NA 5' UTR (NM_001271833, exon 1 of 12) 5' UTR (NM_001271833, exon 1 of 12) 167 NM_001271833 79961 Hs.557850 NM_024901 DENND2D - DENN/MADD domain containing 2D protein-coding 0.115672 0.750929 -66(GGCGGCCGAG,+,0.00) -159(CCGGCTCCCCGG,+,0.00) -115(CGGCACTA,-,0.00) 24(GTCCGACA,-,0.00) 77(GGCGCGGC,-,0.00) -11(CGCTGGCCCCGC,-,0.00) -160(CCCGGCTCCCCG,-,0.00),-21(CCCAGCTCCGCG,-,0.00) -107(ACCCCCATGGCC,+,0.00),-105(CCCCATGGCCGC,-,0.00) 561_WT_peak_6730 chr7 75987932 75988171 + 67 NA exon (NM_012479, exon 1 of 2) exon (NM_012479, exon 1 of 2) 291 NM_012479 7532 Hs.744840 NM_012479 HPRD:05639 YWHAG 14-3-3GAMMA|PPP1R170 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma protein-coding 0.112971 0.704167 -23(TCCGCCTGCTCG,+,0.00) -22(CCGCCTGCTCGG,+,0.00) -141(GGCGACGA,-,0.00),-121(TCCACGCC,+,0.00) -83(GGCGGGGG,+,0.00) 30(CTTCGCGG,+,0.00) -157(CCCGCCATCGCG,+,0.00),-44(GCGGCCATGTCG,+,0.00),-42(GGCCATGTCGTC,-,0.00) 561_WT_peak_7425 chr9 128003278 128003522 + 67 NA exon (NM_005347, exon 1 of 8) exon (NM_005347, exon 1 of 8) 266 NM_005347 3309 Hs.743241 NM_005347 HPRD:00682 HSPA5 BIP|GRP78|HEL-S-89n|MIF2 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) protein-coding 0.073770 0.665306 51(GGGCCCGGGGTC,+,0.00) -100(CCTCCTCCTCGG,+,0.00) -137(TCGATGCC,+,0.00) 69(CGCCACGA,-,0.00) 561_WT_peak_4362 chr2 171785540 171785935 + 67 NA 5' UTR (NM_015530, exon 1 of 10) 5' UTR (NM_015530, exon 1 of 10) 701 NM_015530 26003 Hs.431317 NM_015530 HPRD:08303 GORASP2 GOLPH6|GRASP55|GRS2|p59 golgi reassembly stacking protein 2, 55kDa protein-coding 0.139241 0.744949 135(TCGCCCGCCGCC,+,0.00) -94(CCGCCCTCCCGG,+,0.00) -29(GGCGTCGC,-,0.00),162(AGCGTCGA,-,0.00) -88(TCCCGGCCCG,+,0.00) 177(GGCGGGGG,+,0.00) -100(CCCTCTCCGCCC,+,0.00),-91(CCCTCCCGGCCC,+,0.00) 217(CTCCGACG,-,0.00) 207(CGGGTAAG,+,0.00) 178(GCGGGGGCACCG,+,0.00) 109(CGCGGAGCCCGG,+,0.00) -133(CGACGCGG,+,0.00),64(CTACGCGG,+,0.00) 141(GCCGCCATGGGC,+,0.00) -28(GCGTCGCAGC,-,0.00) 21(GCGGCCCGGCTC,+,0.00) 561_WT_peak_7234 chr9 26946957 26947344 + 67 NA promoter-TSS (NM_001099222) promoter-TSS (NM_001099222) 113 NM_001099223 80173 Hs.145402 NM_025103 HPRD:09727 IFT74 CCDC2|CMG-1|CMG1 intraflagellar transport 74 protein-coding 0.108527 0.698454 187(CCGACGCC,+,0.00) -10(GAGCGCCGGGCC,+,0.00) -144(CCCGTACG,+,0.00) 106(GACACAGCAAGC,+,0.00) -7(CGCCGGGCCGCG,+,0.00) 97(GGGCCGAGTG,+,0.00) -19(CGACTCGG,+,0.00) 75(GCTGGGAAGG,+,0.00) -8(GCGCCGGGCCGC,-,0.00) 561_WT_peak_7102 chr8 103819529 103819763 + 67 NA Intergenic Intergenic 56751 NM_148174 51582 Hs.459106 NM_015878 HPRD:07443 AZIN1 OAZI|OAZIN|ODC1L antizyme inhibitor 1 protein-coding 0.029915 0.600000 47(AGAGGCTT,-,0.00) -74(TGGGTAAA,+,0.00) -21(GGCGCCGTGGCA,+,0.00) 561_WT_peak_3684 chr19 18699608 18699939 + 67 NA intron (NM_001100418, intron 1 of 4) CpG 278 NM_001100418 55049 Hs.655317 NM_017967 HPRD:07948 C19orf60 - chromosome 19 open reading frame 60 protein-coding 0.114804 0.746988 -32(CGGGGCGGGCGG,-,0.00) 150(CCCCCGCC,-,0.00) -33(GCGGGGCGGGCG,+,0.00) -77(GCCGGCGTGGCC,+,0.00) -145(GCGGCGGAGC,+,0.00) 561_WT_peak_2651 chr16 1877080 1877323 + 67 NA promoter-TSS (NM_001142398) promoter-TSS (NM_001142398) -6 NM_001040427 3029 Hs.157394 NM_005326 HPRD:00731 HAGH GLO2|GLX2|GLXII|HAGH1 hydroxyacylglutathione hydrolase protein-coding 0.098765 0.668033 -160(GAGCGCCACGCC,+,0.00) -112(CGTCGCTG,+,0.00) 64(CTACGCGG,+,0.00) -108(GCTGCGGGGG,+,0.00) 561_WT_peak_1058 chr10 75815874 75816190 + 67 NA intron (NM_003373, intron 2 of 20) intron (NM_003373, intron 2 of 20) 58160 NM_014000 7414 Hs.643896 NM_003373 HPRD:01900 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding 0.000000 0.350158 -113(GGGTTTTG,-,0.00) 561_WT_peak_638 chr1 179851736 179852009 + 67 NA exon (NM_015602, exon 1 of 10) exon (NM_015602, exon 1 of 10) 695 NM_001267578 26092 Hs.496459 NM_015602 HPRD:13958 TOR1AIP1 LAP1|LAP1B torsin A interacting protein 1 protein-coding 0.106227 0.620438 -78(AGCCGCCA,-,0.00) 43(CGCGTACT,+,0.00) 22(GAAAGAGGAAGT,+,0.00) -110(CCAGGGCCGGCG,+,0.00) -114(CGCGCCAGGGCC,+,0.00) 561_WT_peak_6439 chr6 111805072 111805312 + 67 NA promoter-TSS (NM_002912) promoter-TSS (NM_002912) -274 NM_002912 5980 Hs.232021 NM_002912 HPRD:04145 REV3L POLZ|REV3 REV3-like, polymerase (DNA directed), zeta, catalytic subunit protein-coding 0.079167 0.589212 -129(ACGTGCCG,+,0.00) -155(GCCGCCCTGGCG,+,0.00) 561_WT_peak_3860 chr19 50145256 50145514 + 67 NA promoter-TSS (NM_021228) promoter-TSS (NM_021228) 3 NM_021228 58506 Hs.103521 NM_021228 HPRD:11604 SCAF1 SRA1 SR-related CTD-associated factor 1 protein-coding 0.143411 0.725869 24(CCGCCCCAGCCC,+,0.00),58(GAGCCGCAGCCC,+,0.00) -158(TGCGCGGA,-,0.00) -128(CGCGGACCCCGC,-,0.00),31(AGCCCGCCCCGC,-,0.00),49(CCGGGGCCGGAG,+,0.00) -124(GACCCCGCCC,-,0.00),20(AACCCCGCCC,-,0.00) 561_WT_peak_3710 chr19 28284499 28284975 + 67 NA promoter-TSS (NR_110687) promoter-TSS (NR_110687) -66 NR_110690 101927151 Hs.567934 NR_110687 LOC101927151 - uncharacterized LOC101927151 ncRNA 0.065126 0.624738 -134(CGCCCGGC,-,0.00) 114(TCCTGCCG,+,0.00) 561_WT_peak_7066 chr8 90914271 90914606 + 67 NA promoter-TSS (NM_001126111) promoter-TSS (NM_001126111) -324 NM_001126111 734 Hs.436445 NM_004337 HPRD:06853 OSGIN2 C8orf1|hT41 oxidative stress induced growth inhibitor family member 2 protein-coding 0.119403 0.699405 64(TCGACGCG,+,0.00) 117(CTGACCGA,+,0.00) 149(TCGAGCCG,+,0.00) -22(GCCGCGCC,+,0.00),153(GCCGCGCA,+,0.00) 18(GGCCCGAGTT,+,0.00) 106(GCGGCGGGGC,+,0.00) 561_WT_peak_5661 chr5 271642 272013 + 67 NA promoter-TSS (NM_013232) promoter-TSS (NM_013232) 91 NM_001267559 10016 Hs.50823 NM_013232 HPRD:03035 PDCD6 ALG-2|PEF1B programmed cell death 6 protein-coding 0.102426 0.725806 158(CCCGCCTCCGCC,+,0.00) 200(CCGACCAA,+,0.00) 50(CCCCGGCCCT,+,0.00) -53(CCCCCGGC,-,0.00) -49(CGGCAGAGGCGG,+,0.00) -11(CGTCGCTG,+,0.00) -27(GGCCTGAGAGGT,-,0.00) -129(TGCGCGGG,-,0.00),84(GGCGCGGC,-,0.00) -58(CCCTGCCCCCGG,-,0.00),136(GCCTGGCACCGC,-,0.00) 26(GCCCATGGCCGC,-,0.00) -146(GCTGCGAGGG,+,0.00) 6(CAGCCCAGCCGC,-,0.00),133(GCGGCCTGGCAC,+,0.00) 561_WT_peak_5166 chr3 97483259 97483433 + 67 NA promoter-TSS (NM_032146) promoter-TSS (NM_032146) -19 NM_001278293 84100 Hs.373801 NM_032146 HPRD:10588 ARL6 BBS3|RP55 ADP-ribosylation factor-like 6 protein-coding 0.080460 0.634286 -91(AAACGCTT,-,0.00) -160(CAGCGCCAGCCT,+,0.00) -101(CGCGAACG,+,0.00) -124(CCGAGCGA,+,0.00) -15(GAAATAGGCAGC,+,0.00) -30(CCCGGCTCCTCG,-,0.00) 561_WT_peak_7574 chrX 70503557 70503775 + 67 NA intron (NM_001145410, intron 1 of 9) CpG 624 NM_001145408 4841 Hs.533282 NM_007363 HPRD:02098 NONO NMT55|NRB54|P54|P54NRB|PPP1R114 non-POU domain containing, octamer-binding protein-coding 0.055046 0.593607 -16(CTCTGCCGCC,-,0.00) 0(CCTTCTCAGCCC,+,0.00) 561_WT_peak_865 chr10 6125808 6126030 + 67 NA Intergenic Intergenic -5030 NM_032905 84991 Hs.498548 NM_032905 HPRD:09501 RBM17 SPF45 RNA binding motif protein 17 protein-coding 0.022523 0.479821 561_WT_peak_807 chr1 235460887 235461197 + 67 NA intron (NM_001206794, intron 2 of 23) L1MC5|LINE|L1 29760 NM_001206794 51742 Hs.575782 NM_016374 HPRD:10661 ARID4B BCAA|BRCAA1|RBBP1L1|RBP1L1|SAP180 AT rich interactive domain 4B (RBP1-like) protein-coding 0.003226 0.353698 561_WT_peak_4265 chr2 113300027 113300373 + 67 NA exon (NM_001282774, exon 1 of 13) exon (NM_001282774, exon 1 of 13) 587 NM_001282772 84172 Hs.745127 NM_019014 HPRD:06852 POLR1B RPA135|RPA2|Rpo1-2 polymerase (RNA) I polypeptide B, 128kDa protein-coding 0.086705 0.657061 109(AGGTGGCT,+,0.00) 69(GTCCGCCG,-,0.00) 88(GCGGCGAGGC,+,0.00) 561_WT_peak_295 chr1 78149050 78149508 + 67 NA promoter-TSS (NM_015534) promoter-TSS (NM_015534) -936 NM_015534 26009 Hs.480506 NM_015534 HPRD:15907 ZZZ3 ATAC1 zinc finger, ZZ-type containing 3 protein-coding 0.091703 0.675381 -84(CCTTCCGGTCCC,-,0.00) 200(AATCGGCT,+,0.00) -34(GGCGGCGA,-,0.00) -89(CGGCTCCTTCCG,-,0.00) -155(TAGCGGCG,-,0.00) -84(CCTTCCGGTCCC,-,0.00) -45(GCGGCGGCGGCG,+,0.00),-42(GCGGCGGCGGCG,+,0.00),-39(GCGGCGGCGGCG,+,0.00) -154(AGCGGCGCCGCG,+,0.00),-154(AGCGGCGCCGCG,-,0.00) 31(ACCGCGGCCC,-,0.00) 63(GCCGCCGAGGCC,+,0.00) 561_WT_peak_1642 chr12 30907987 30908203 + 67 NA promoter-TSS (NM_032156) promoter-TSS (NM_032156) -647 NM_032156 65981 Hs.234355 NM_023925 HPRD:12711 CAPRIN2 C1QDC1|EEG-1|EEG1|RNG140 caprin family member 2 protein-coding 0.120370 0.714286 -37(GCGACGCC,+,0.00) -102(TAGGTCGG,-,0.00) -89(GGCGCGGT,-,0.00),-10(ACCGCGCA,+,0.00) -8(CGCGCAGCCCCG,+,0.00) -142(CTTGTCGG,+,0.00) -24(CCGGCAGGCCGG,-,0.00) 561_WT_peak_1292 chr11 57480093 57480276 + 67 NA promoter-TSS (NM_153450) promoter-TSS (NM_153450) 189 NR_037646 100528016 Hs.166011 NR_037646 ENSG00000254462 TMX2-CTNND1 - TMX2-CTNND1 readthrough (NMD candidate) ncRNA 0.087432 0.597826 -86(TCTGTCGG,-,0.00) -162(CGGTCTTG,-,0.00) 561_WT_peak_3815 chr19 46766260 46766440 + 67 NA intron (NR_046936, intron 3 of 3) intron (NR_046936, intron 3 of 3) 33341 NM_198541 374918 Hs.546554 NM_198541 HPRD:17139 IGFL1 APRG644|UNQ644 IGF-like family member 1 protein-coding 0.011111 0.425414 -80(AAGTGGCT,+,0.00) 561_WT_peak_6981 chr8 38033710 38034083 + 67 NA promoter-TSS (NM_004874) promoter-TSS (NM_004874) -210 NM_001204878 9530 Hs.194726 NM_004874 HPRD:04861 BAG4 BAG-4|SODD BCL2-associated athanogene 4 protein-coding 0.072386 0.617647 59(AAGCCCGGAATC,+,0.00) -142(GCGCCCGCCCGG,+,0.00),-134(CCGGGAGGAAGG,-,0.00) 40(TCGCCGCC,+,0.00) -64(AGGCTGGCGGTG,-,0.00) 48(TCGGTGGG,-,0.00),71(CCGACCGA,+,0.00) 108(GCCGGGGG,+,0.00) 174(AGGAAGAGGCGG,+,0.00) 15(CAAAACCT,+,0.00) -58(GCGGTGCCAGGC,+,0.00),35(CGCAGTCGCCGC,-,0.00) 43(CCGCCTCG,-,0.00) 561_WT_peak_6431 chr6 109704138 109704463 + 67 NA promoter-TSS (NM_001142401) promoter-TSS (NM_001142401) -538 NM_001142401 8763 Hs.520313 NM_006016 HPRD:04523 CD164 MGC-24|MUC-24|endolyn CD164 molecule, sialomucin protein-coding 0.046154 0.546012 12(GGCGTCTA,-,0.00) -148(CGGCAGGA,-,0.00) 117(CAAAAGCG,+,0.00) -39(GCCGCCCA,+,0.00) -13(GGCGCCGCCC,-,0.00) 561_WT_peak_1712 chr12 53846223 53846408 + 67 NA intron (NM_001098620, intron 1 of 13) CpG 429 NM_001128911 5094 Hs.546271 NM_005016 HPRD:03129 PCBP2 HNRNPE2|HNRPE2|hnRNP-E2 poly(rC) binding protein 2 protein-coding 0.113514 0.698925 -23(CCCCCCTCCCCC,+,0.00) 2(TGGCGGCT,+,0.00) -15(CCCCCGCC,-,0.00) -7(TTTTCCCG,-,0.00) -57(GGCGCGGC,-,0.00),7(GCTGCGCA,+,0.00) -93(GTGCCAGGCCGG,-,0.00) 561_WT_peak_4551 chr20 3792357 3792631 + 67 NA intron (NR_109859, intron 3 of 3) intron (NR_109859, intron 3 of 3) 3353 NR_109859 101929125 Hs.744106 NR_109859 LOC101929125 - uncharacterized LOC101929125 ncRNA 0.036496 0.643636 72(GGCTCTCAGCCC,+,0.00) 2(GCGGGGCCTGGG,+,0.00) 561_WT_peak_6065 chr5 180687913 180688278 + 67 NA promoter-TSS (NR_102760) promoter-TSS (NR_102760) 24 NM_032765 84851 Hs.458412 NM_032765 TRIM52 RNF102 tripartite motif containing 52 protein-coding 0.087671 0.683060 -62(TCGGTGGG,-,0.00) 157(CGGGCCGGGA,-,0.00) 144(GCCGGGGG,+,0.00) 130(CGTCTCTA,+,0.00) 561_WT_peak_5392 chr4 1722395 1722577 + 67 NA promoter-TSS (NM_006342) promoter-TSS (NM_006342) 598 NM_001127266 92305 Hs.518562 NM_138385 HPRD:14290 TMEM129 D4S2561E transmembrane protein 129, E3 ubiquitin protein ligase protein-coding 0.126374 0.688525 -144(GGGCACGA,-,0.00) 6(CGCGCAGCCGCC,+,0.00) -85(GCCCCGCCGC,-,0.00) -131(GCGTCCTCGCTG,+,0.00),-117(CAGCCAGCCCGA,-,0.00) 561_WT_peak_2867 chr16 66907149 66907481 + 67 NA Intergenic Intergenic -7068 NM_020786 57546 Hs.632214 NM_020786 HPRD:15112 PDP2 PPM2C2 pyruvate dehyrogenase phosphatase catalytic subunit 2 protein-coding 0.063253 0.594595 -80(CTCGGCCGCA,-,0.00) -10(TCCACGCC,+,0.00) -113(GCCGCGCC,+,0.00) -119(CGCCGGGCCGCG,+,0.00) -115(GGGCCGCGCC,+,0.00) 561_WT_peak_3310 chr17 63119465 63119683 + 67 NA Intergenic CpG -13882 NM_001165933 8787 Hs.664380 NM_003835 HPRD:04962 RGS9 PERRS|RGS9L regulator of G-protein signaling 9 protein-coding 0.077982 0.593607 -42(GGCGTCGA,-,0.00) -34(GCGGCGGAGC,+,0.00) 561_WT_peak_2972 chr17 1587872 1588113 + 67 NA intron (NM_006445, intron 1 of 42) CpG 184 NM_006445 10594 Hs.181368 NM_006445 HPRD:06295 PRPF8 HPRP8|PRP8|PRPC8|RP13|SNRNP220 pre-mRNA processing factor 8 protein-coding 0.091286 0.681818 58(AGGCCGCT,+,0.00) 61(CCGCTTTCCCCG,+,0.00) -123(AGGCCCGGGC,-,0.00) -42(CGCCCGGC,-,0.00) -16(CGGCCCGA,-,0.00) 65(TTTCCCCG,-,0.00) 62(CGCTTTCCCCGC,-,0.00) -47(AGCCCCGCCC,-,0.00),-20(CACTCGGCCC,-,0.00),58(AGGCCGCTTT,+,0.00) 561_WT_peak_1788 chr12 89746450 89746759 + 67 NA promoter-TSS (NM_001946) promoter-TSS (NM_001946) 32 NM_001946 1848 Hs.298654 NM_001946 HPRD:04124 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding 0.058252 0.538710 38(CGTTCGCG,-,0.00) 26(TCGCGACG,-,0.00) -27(CGTCGGAA,+,0.00) 561_WT_peak_2298 chr14 75726100 75726376 + 67 NA Intergenic Intergenic -19243 NM_005252 2353 Hs.25647 NM_005252 HPRD:01275 FOS AP-1|C-FOS|p55 FBJ murine osteosarcoma viral oncogene homolog protein-coding 0.036232 0.523466 -161(TCGGTCGC,-,0.00),-108(CCTACCGA,+,0.00) 44(CCCTCTCAGTCA,+,0.00) 561_WT_peak_4073 chr2 55459851 55460039 + 67 NA promoter-TSS (NM_152385) promoter-TSS (NM_152385) 131 NM_001177413 6233 Hs.311640 NM_002954 HPRD:01878 RPS27A CEP80|HEL112|S27A|UBA80|UBC|UBCEP1|UBCEP80 ribosomal protein S27a protein-coding 0.042553 0.555556 -67(AGCCGCCA,-,0.00) 561_WT_peak_6150 chr6 26196041 26196537 + 67 NA TTS (NM_003530) TTS (NM_003530) 3232 NM_003530 8351 Hs.532144 NM_003530 HPRD:11905 HIST1H3D H3/b|H3FB histone cluster 1, H3d protein-coding 0.028226 0.480885 203(AGCCACCT,-,0.00) 4(CCGCCTCCCGGG,+,0.00) 102(TAGAGACG,-,0.00),265(CGTCCCTA,+,0.00) -98(TGGTTTTG,-,0.00) -141(GGCCAAGGCGGG,-,0.00),164(CCCGCCTTGGCA,+,0.00) 561_WT_peak_7124 chr8 121761716 121761958 + 67 NA intron (NM_021021, intron 1 of 6) intron (NM_021021, intron 1 of 6) -11656 NR_125419 101927543 Hs.371902 NR_125419 ENSG00000248318 LOC101927543 - uncharacterized LOC101927543 ncRNA 0.004132 0.374486 561_WT_peak_5060 chr3 38080981 38081176 + 67 NA exon (NM_007335, exon 1 of 37) exon (NM_007335, exon 1 of 37) 382 NM_007337 9940 Hs.714499 NM_007335 HPRD:07234 DLEC1 CFAP81|DLC1|F56 deleted in lung and esophageal cancer 1 protein-coding 0.123077 0.637755 -101(GGCGACGA,-,0.00),-4(GGCGTCGC,-,0.00) -70(CCCGCGGC,-,0.00) -50(CGCCACGA,-,0.00) -138(CGGCGTCTTCCG,-,0.00) -13(CGTGGCGG,+,0.00) 561_WT_peak_2776 chr16 30198247 30198435 + 67 NA intron (NM_007074, intron 4 of 10) intron (NM_007074, intron 4 of 10) -1664 NR_002454 606724 Hs.744975 NR_002454 LOC606724 - coronin, actin binding protein, 1A pseudogene pseudo 0.037234 0.650794 -138(CGGGAGGAGGGG,+,0.00) -10(GCGGCCATGCTG,+,0.00) 561_WT_peak_3144 chr17 36884538 36884744 + 67 NA 3' UTR (NM_005937, exon 20 of 20) 3' UTR (NM_005937, exon 20 of 20) -1869 NM_001136498 284106 Hs.713595 NM_001136498 CISD3 Miner2 CDGSH iron sulfur domain 3 protein-coding 0.024272 0.536232 -107(GGTGGAGGGTGG,-,0.00) -61(GGGAGGGGAAGG,+,0.00) 561_WT_peak_7605 chrX 119631929 119632128 + 67 NA Intergenic Intergenic -28824 NM_013995 3920 Hs.496684 NM_002294 HPRD:02396 LAMP2 CD107b|LAMP-2|LAMPB|LGP110 lysosomal-associated membrane protein 2 protein-coding 0.045226 0.500000 561_WT_peak_1948 chr13 21750542 21750812 + 67 NA promoter-TSS (NM_001166017) promoter-TSS (NM_001166017) 64 NM_001166017 221150 Hs.88523 NM_145061 HPRD:10706 SKA3 C13orf3|RAMA1 spindle and kinetochore associated complex subunit 3 protein-coding 0.118519 0.690037 41(AGAGCCGAAGTC,+,0.00) 48(AAGTCTCT,+,0.00) -9(TCGGCGCC,+,0.00) -63(GGCGTACG,+,0.00),-61(CGTACGCA,-,0.00),-2(CGGACGCG,-,0.00),90(CGCTTACG,+,0.00) -5(CGCCGGAC,+,0.00) 40(GAGAGCCGAAGT,+,0.00) 8(CTCGGCTCTGCG,-,0.00) -164(CAGCCGGGCCGT,-,0.00) 561_WT_peak_4109 chr2 65454503 65454767 + 67 NA promoter-TSS (NM_001005386) promoter-TSS (NM_001005386) -194 NM_005722 10097 Hs.643727 NM_005722 HPRD:05023 ACTR2 ARP2 ARP2 actin-related protein 2 homolog (yeast) protein-coding 0.083333 0.637736 -70(AGAACCGGTGTC,+,0.00) -114(CCGCCCTACCCG,+,0.00) -117(TCCCCGCCCT,+,0.00) 44(CGCCCGGC,-,0.00) -71(CAGAACCG,+,0.00) 561_WT_peak_5331 chr3 177144989 177145234 + 67 NA Intergenic MLT1F1|LTR|ERVL-MaLR -14598 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA 0.024490 0.483740 -106(AAGCGTCT,+,0.00) -52(GAAACAGAAAGA,+,0.00) 561_WT_peak_3706 chr19 24216303 24216656 + 67 NA intron (NM_001278663, intron 1 of 2) intron (NM_001278663, intron 1 of 2) 272 NM_001278677 9534 Hs.434406 NM_004876 HPRD:05304 ZNF254 BMZF-5|HD-ZNF1|ZNF539|ZNF91L zinc finger protein 254 protein-coding 0.067989 0.672316 96(TGGCGGCT,+,0.00) 69(CAGCCCCAGGCC,+,0.00) 140(CCTGCGGCGCCC,-,0.00) 100(GGCTGGGCCCGC,-,0.00) 561_WT_peak_7117 chr8 117886819 117887097 + 67 NA promoter-TSS (NR_037404) promoter-TSS (NR_037404) 81 NR_037404 100500914 NR_037404 miRBase:MI0016000 MIR3610 - microRNA 3610 ncRNA 0.079137 0.630824 -151(GTCGGCCGAG,+,0.00) -97(CCGGGGAGGGGA,-,0.00),-78(CGGGGGAGGGGG,-,0.00) 56(TCCTGCCG,+,0.00),84(CGGCAGGA,-,0.00) 60(GCCGCCCA,+,0.00) -111(GCGGGCTGGGTG,+,0.00) 561_WT_peak_2352 chr14 97908703 97908839 + 67 NA Intergenic Intergenic -16382 NR_110165 101929241 Hs.650839 NR_110165 ENSG00000246084 LOC101929241 - uncharacterized LOC101929241 ncRNA 0.000000 0.459854 561_WT_peak_6846 chr7 130793505 130793728 + 67 NA intron (NR_109855, intron 1 of 4) UCON29|DNA|PiggyBac? 1059 NR_109850 378805 Hs.150556 NM_001085379 ENSG00000226380 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA 0.013453 0.401786 -92(CAAAACCA,+,0.00) 561_WT_peak_796 chr1 233742610 233742779 + 67 NA Intergenic Intergenic -7056 NM_002245 3775 Hs.208544 NM_002245 HPRD:03447 KCNK1 DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1 potassium channel, subfamily K, member 1 protein-coding 0.000000 0.423529 561_WT_peak_3353 chr17 74381919 74382254 + 67 NA exon (NM_182965, exon 3 of 6) exon (NM_182965, exon 3 of 6) 797 NM_001142602 8877 Hs.68061 NM_021972 HPRD:04768 SPHK1 SPHK sphingosine kinase 1 protein-coding 0.071642 0.645833 -149(AGGCCGCT,+,0.00) 5(CCCGCGGC,-,0.00) -34(TGGTTTTG,-,0.00) -78(GTTACCCG,-,0.00) 60(GCCTTGCAGC,-,0.00) 561_WT_peak_5730 chr5 43483563 43483754 + 67 NA intron (NM_022483, intron 1 of 2) CpG 334 NM_022483 64417 Hs.732093 NM_022483 HPRD:07965 C5orf28 - chromosome 5 open reading frame 28 protein-coding 0.099476 0.713542 -58(GCCGGAGGGCGG,-,0.00) -93(GGGCTGGGGTTC,-,0.00) -103(CGTAGGCG,-,0.00) -20(GCCGCGGG,+,0.00) -157(CGGCACGA,-,0.00) -50(GCGGCGCCAGGG,+,0.00) -52(GGGCGGCGCC,+,0.00) -48(GGCGCCAGGGCT,+,0.00) 561_WT_peak_1004 chr10 63046526 63046703 + 67 NA Intergenic Intergenic -165783 NR_120643 101928781 Hs.568856 NR_120643 TMEM26-AS1 - TMEM26 antisense RNA 1 ncRNA 0.005650 0.365169 561_WT_peak_5922 chr5 133968582 133968780 + 67 NA promoter-TSS (NM_001033503) promoter-TSS (NM_001033503) -148 NM_016103 51128 Hs.432984 NM_016103 HPRD:09647 SAR1B ANDD|CMRD|GTBPB|SARA2 secretion associated, Ras related GTPase 1B protein-coding 0.055556 0.597990 -81(AGCCGCCT,-,0.00) -56(CCGCCCGA,+,0.00) -145(TCTTGCCG,+,0.00),-31(GCGTGCCG,+,0.00) -38(GGGGCCTGCGTG,+,0.00) 561_WT_peak_5686 chr5 34915582 34916069 + 67 NA promoter-TSS (NM_018321) promoter-TSS (NM_018321) 5 NM_018321 55299 Hs.718510 NM_018321 BRIX1 BRIX|BXDC2 BRX1, biogenesis of ribosomes, homolog (S. cerevisiae) protein-coding 0.096509 0.645492 228(GGGACCGGATCC,+,0.00) -99(CTCGGCCACC,-,0.00) 177(AGCCGCCA,-,0.00) 84(GGCGGCGA,-,0.00),120(GGCGTGGA,-,0.00) 50(GAGCGGCAGCGC,+,0.00) -54(GCGTGCCG,+,0.00),191(CGGCACGC,-,0.00) -50(GCCGCGCC,+,0.00) -164(GGCGGCTCCGAG,-,0.00),-156(CGAGGAACCGCG,+,0.00),-2(CGCGGAGCTGAG,+,0.00),172(TGCGGAGCCGCC,+,0.00) -114(AGACCGGCCC,-,0.00) 85(GCGGCGAGGC,+,0.00) 561_WT_peak_4243 chr2 103034967 103035075 + 67 NA promoter-TSS (NM_003853) promoter-TSS (NM_003853) -229 NM_003853 8807 Hs.158315 NM_003853 HPRD:05147 IL18RAP ACPL|CD218b|CDw218b|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1R-7|IL-1R7|IL-1RAcPL|IL18RB interleukin 18 receptor accessory protein protein-coding 0.000000 0.385321 561_WT_peak_2726 chr16 21610453 21610846 + 67 NA promoter-TSS (NM_016025) promoter-TSS (NM_016025) 57 NR_110930 101927814 Hs.555158 NR_110930 LOC101927814 - uncharacterized LOC101927814 ncRNA 0.086514 0.644670 71(AGGGCCGGGA,-,0.00) 160(GCCGGGGG,+,0.00) -149(CTGCACGA,-,0.00) 171(AAGCGACG,-,0.00) 104(TGCGCGCT,-,0.00) 174(CGACGCGG,+,0.00) 123(GCCTCCCAGC,-,0.00) 561_WT_peak_214 chr1 45273546 45273789 + 67 NA promoter-TSS (NM_001136537) promoter-TSS (NM_001136537) -487 NM_001136537 149478 Hs.632400 NM_001136537 ENSG00000222009 BTBD19 - BTB (POZ) domain containing 19 protein-coding 0.024691 0.586066 561_WT_peak_5700 chr5 40333596 40333893 + 67 NA Intergenic Intergenic 281351 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA 0.003367 0.382550 561_WT_peak_6490 chr6 138029199 138029398 + 67 NA Intergenic Intergenic 30876 NR_121618 100507406 Hs.556703 NR_121618 ENSG00000234956 LOC100507406 - uncharacterized LOC100507406 ncRNA 0.040201 0.520000 -114(AACTCGGCCT,-,0.00) 561_WT_peak_3123 chr17 33469201 33469407 + 67 NA promoter-TSS (NM_018096) promoter-TSS (NM_018096) 30 NM_018096 54475 Hs.85570 NM_018096 HPRD:16903 NLE1 Nle notchless homolog 1 (Drosophila) protein-coding 0.111650 0.743961 -122(GCGACGCC,+,0.00),-4(TCGCCGCC,+,0.00) -14(TCGGGCGG,-,0.00) -128(CCCGCGGC,-,0.00),-115(CCCCCGCC,-,0.00) -162(CTCTCTCAGGCC,+,0.00) -12(GGGCGGGGTC,+,0.00) -130(GCCCCGCGGC,-,0.00),-125(GCGGCGACGC,+,0.00) 561_WT_peak_749 chr1 225632691 225632870 + 67 NA Intergenic Intergenic -16223 NM_194442 3930 Hs.435166 NM_002296 HPRD:02488 LBR DHCR14B|LMN2R|PHA|TDRD18 lamin B receptor protein-coding 0.016760 0.461111 -71(CGGTTTGG,-,0.00) -46(AAACCAGGAAGC,+,0.00) 561_WT_peak_320 chr1 92270147 92270524 + 67 NA intron (NR_036634, intron 2 of 17) intron (NR_036634, intron 2 of 17) 81501 NM_003243 7049 Hs.482390 NM_003243 HPRD:02846 TGFBR3 BGCAN|betaglycan transforming growth factor, beta receptor III protein-coding 0.026525 0.544974 200(GGCGTGGA,-,0.00) 561_WT_peak_7350 chr9 95087540 95087803 + 67 NA promoter-TSS (NM_001286969) promoter-TSS (NM_001286969) -79 NM_001286969 401541 Hs.713775 NM_001012267 CENPP CENP-P centromere protein P protein-coding 0.053232 0.553030 561_WT_peak_1277 chr11 47663820 47664039 + 67 NA intron (NM_014342, intron 1 of 12) CpG 277 NM_014342 23788 Hs.269944 NM_014342 HPRD:14788 MTCH2 MIMP|SLC25A50 mitochondrial carrier 2 protein-coding 0.105023 0.681818 -67(GCGACGCC,+,0.00) 22(CGCGTCCG,+,0.00) -102(GCGACCGA,+,0.00) -87(GCCGGGCG,+,0.00) -70(GCGGCGACGC,+,0.00) 561_WT_peak_124 chr1 27018809 27019209 + 67 NA Intergenic Intergenic -3513 NM_006015 8289 Hs.468972 NM_006015 HPRD:04319 ARID1A B120|BAF250|BAF250a|BM029|C1orf4|ELD|MRD14|OSA1|P270|SMARCF1|hELD|hOSA1 AT rich interactive domain 1A (SWI-like) protein-coding 0.052500 0.523691 33(TCCACGCC,+,0.00),199(TCCACGCC,+,0.00) 229(CCTCGCTA,+,0.00) 561_WT_peak_5564 chr4 103265855 103266184 + 67 NA 5' UTR (NM_001135147, exon 2 of 11) 5' UTR (NM_001135147, exon 2 of 11) 329 NM_022154 64116 Hs.288034 NM_022154 HPRD:12286 SLC39A8 BIGM103|LZT-Hs6|ZIP8 solute carrier family 39 (zinc transporter), member 8 protein-coding 0.100304 0.690909 -52(CCGACGCC,+,0.00) 34(CCCCCGGC,-,0.00),147(CGCCCGGC,-,0.00) -54(CTCCGACG,-,0.00) -161(GCCGCGCA,+,0.00) -94(CGCTGCTCCGAG,-,0.00) 124(GCTGCGTGGC,+,0.00) 561_WT_peak_4831 chr22 18893587 18893915 + 67 NA promoter-TSS (NM_005675) promoter-TSS (NM_005675) 15 NM_005675 8214 Hs.474185 NM_005675 HPRD:03177 DGCR6 - DiGeorge syndrome critical region gene 6 protein-coding 0.140244 0.717325 -138(CCGGGGAGCAGG,-,0.00),-24(CGGGGAAGGCGC,-,0.00) 127(CGTCCGCG,-,0.00) 71(GCGGTCGG,-,0.00) 55(AGGGGCGGGA,-,0.00) 101(CGTCGCTG,+,0.00) -146(AAAGTGGCCC,-,0.00) 145(CTACGCGG,+,0.00) 131(CGCGCCATGGAG,+,0.00) 561_WT_peak_6770 chr7 99686446 99686779 + 67 NA promoter-TSS (NM_006833) promoter-TSS (NM_006833) 29 NM_006833 10980 Hs.15591 NM_006833 HPRD:16735 COPS6 CSN6|MOV34-34KD COP9 signalosome subunit 6 protein-coding 0.135135 0.748503 158(GGAGGAGGGCGG,-,0.00) -126(CGACCCGGGAAC,+,0.00) -112(CCTGCTCCCCGG,+,0.00),-41(CCGGGAAGGAAG,-,0.00),56(GCGGGATGGAGG,-,0.00) -162(GGCGTCGG,-,0.00) -82(GCCGCGGG,+,0.00) 45(CGGAGGAAGCAG,+,0.00),48(AGGAAGCAGCGG,+,0.00) -160(CGTCGGGC,+,0.00) -4(CGGGGAAA,+,0.00) -79(GCGGGGACACCG,+,0.00),-26(GCGGGGCCGAGG,+,0.00),7(GCGGCGGCGGCG,+,0.00),10(GCGGCGGCGGCG,+,0.00),13(GCGGCGGCGGCG,+,0.00) 561_WT_peak_5237 chr3 125094003 125094316 + 67 NA promoter-TSS (NM_021964) promoter-TSS (NM_021964) 39 NM_021964 7707 Hs.592591 NM_021964 HPRD:03540 ZNF148 BERF-1|BFCOL1|HT-BETA|ZBP-89|ZFP148|pHZ-52 zinc finger protein 148 protein-coding 0.076677 0.668790 -137(GGGGGAGGGGGG,-,0.00),-65(TCCCCCTCCTCC,+,0.00),-62(CCCTCCTCCTCC,+,0.00),-59(TCCTCCTCCTCC,+,0.00),-56(TCCTCCTCCTCC,+,0.00) 27(TCGCCGCC,+,0.00),135(GGCTTCGA,-,0.00) 85(CGGCGCCCGCCC,+,0.00) -12(TAGAGACG,-,0.00) 22(CGCGGTCGCCGC,-,0.00),84(GCGGCGCCCGCC,+,0.00) 15(GCGCCGCCGC,-,0.00),79(GCTCCGCGGC,-,0.00) 109(GAGACCTGGCTG,+,0.00) 561_WT_peak_5999 chr5 157030382 157030758 + 67 NA Intergenic Intergenic -27739 NM_033274 8728 Hs.483944 NM_023038 HPRD:04704 ADAM19 MADDAM|MLTNB ADAM metallopeptidase domain 19 protein-coding 0.013298 0.440318 14(CATAACCG,+,0.00) -58(GCCCATGGAGGG,-,0.00) 561_WT_peak_4133 chr2 70369795 70370259 + 67 NA Intergenic CpG -17579 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LOC100133985 - uncharacterized LOC100133985 ncRNA 0.094828 0.600000 111(CAGCCCCAGCCA,+,0.00) 126(GCGGTCGG,-,0.00) 187(TCATGCCG,+,0.00) 34(CGGAAGCGGCGG,+,0.00) -37(GCTGCGCA,+,0.00),123(GGCGCGGT,-,0.00) -160(ACCTGGCCCCGC,-,0.00),42(GCGGCGCGGGCG,+,0.00) -47(CGCCAGGGCGGC,-,0.00) 39(GCGGCGGCGC,+,0.00) 21(CAGCCGAGCCCC,-,0.00) 561_WT_peak_3361 chr17 75953993 75954163 + 67 NA Intergenic CpG -46240 NM_018996 57690 Hs.569831 NM_018996 HPRD:10026 TNRC6C - trinucleotide repeat containing 6C protein-coding 0.094118 0.695906 -38(CGGGCCGGGA,-,0.00) -132(CGGGGAAA,+,0.00) -161(TGCGCGGT,-,0.00) -103(GTTTCGCAGC,-,0.00),-98(GCAGCGAGGC,+,0.00) 561_WT_peak_1157 chr10 121065438 121065860 + 67 NA intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) -71835 NR_039829 100616398 NR_039829 MIR4681 - microRNA 4681 ncRNA 0.021327 0.562648 32(GGGGGAGGGGGG,-,0.00) 207(AGACACCT,-,0.00) 191(CCGTTTTG,-,0.00) 145(TTTGCCCG,-,0.00) 561_WT_peak_4287 chr2 128283793 128284081 + 67 NA 5' UTR (NM_017969, exon 1 of 14) 5' UTR (NM_017969, exon 1 of 14) 150 NM_017969 55677 Hs.469879 NM_017969 HPRD:07639 IWS1 - IWS1 homolog (S. cerevisiae) protein-coding 0.107639 0.664360 -68(CCGCCCGACCGG,+,0.00) 25(CGTACCCG,-,0.00) -68(CCGCCCGA,+,0.00),-64(CCGACCGG,+,0.00) -93(GGCGCGGC,-,0.00) 561_WT_peak_4155 chr2 75071274 75071471 + 67 NA intron (NM_000189, intron 1 of 17) MIR3|SINE|MIR 11590 NM_000189 3099 Hs.406266 NM_000189 HPRD:03080 HK2 HKII|HXK2 hexokinase 2 protein-coding 0.000000 0.434343 -154(GCTGGGAAGG,+,0.00) 561_WT_peak_6017 chr5 171538373 171538551 + 67 NA intron (NM_005990, intron 4 of 18) intron (NM_005990, intron 4 of 18) 76884 NM_005990 6793 Hs.744005 NM_005990 HPRD:06796 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding 0.028090 0.614525 -77(CTGCTACTTCCC,-,0.00) -161(GAAACAGAAACC,+,0.00) 561_WT_peak_1065 chr10 76970012 76970189 + 67 NA promoter-TSS (NM_003375) promoter-TSS (NM_003375) 188 NM_001184823 7417 Hs.355927 NM_003375 HPRD:01904 VDAC2 POR voltage-dependent anion channel 2 protein-coding 0.067797 0.640449 -7(CGCGTAAG,+,0.00) 561_WT_peak_5265 chr3 134204620 134204957 + 67 NA promoter-TSS (NM_015391) promoter-TSS (NM_015391) 43 NM_001242375 25847 Hs.106909 NM_015391 HPRD:08531 ANAPC13 APC13|SWM1 anaphase promoting complex subunit 13 protein-coding 0.080119 0.597633 55(CCCCCCTCCCCC,+,0.00) 30(AGACGCTT,-,0.00) -13(CCGGGGGCGCTG,-,0.00),56(CCCCCTCCCCCG,+,0.00) -14(GCCGGGGG,+,0.00) -132(CGACACGA,-,0.00) -60(GTCCGACA,-,0.00) -108(CGGTTATG,-,0.00),-24(CAAAACCT,+,0.00) -133(CCGACACG,-,0.00) 18(GGCCACCGCGGC,-,0.00) 561_WT_peak_4394 chr2 191224797 191224970 + 67 NA exon (NM_002194, exon 2 of 6) exon (NM_002194, exon 2 of 6) 16687 NM_002194 3628 Hs.32309 NM_002194 HPRD:00923 INPP1 - inositol polyphosphate-1-phosphatase protein-coding 0.023121 0.505747 561_WT_peak_2998 chr17 5015190 5015421 + 67 NA 5' UTR (NM_014519, exon 2 of 5) 5' UTR (NM_014519, exon 2 of 5) 11092 NM_014519 7775 Hs.279914 NM_014519 HPRD:15755 ZNF232 ZSCAN11 zinc finger protein 232 protein-coding 0.099567 0.693966 -162(CTCGGCCTCC,-,0.00) -135(TCGCCGCC,+,0.00) -121(CGTTCGCG,-,0.00) -22(CTGCACGA,-,0.00) 561_WT_peak_2284 chr14 74353062 74353340 + 67 NA promoter-TSS (NM_001242928) promoter-TSS (NM_001242928) -117 NM_001242924 57862 Hs.270869 NM_021188 HPRD:18339 ZNF410 APA-1|APA1 zinc finger protein 410 protein-coding 0.068345 0.512545 -95(TCGGGCGG,-,0.00) 82(CTTCGCGG,+,0.00) 561_WT_peak_7463 chr9 134000916 134001224 + 67 NA 5' UTR (NM_005085, exon 1 of 36) 5' UTR (NM_005085, exon 1 of 36) 122 NM_005085 8021 Hs.654530 NM_005085 HPRD:00258 NUP214 CAIN|CAN|D9S46E|N214|p250 nucleoporin 214kDa protein-coding 0.090909 0.637540 -59(AGCGGCCT,-,0.00) -92(CCGCTGGCGCTG,-,0.00) 5(CGGCGCGA,-,0.00) 46(GGGAGATGAAGG,+,0.00) -58(GCGGCCTGGGTT,+,0.00) 561_WT_peak_2046 chr13 49137659 49137885 + 67 NA Intergenic Intergenic 17265 NR_051983 100129597 Hs.175225 NR_051983 ENSG00000233610 LINC00462 - long intergenic non-protein coding RNA 462 ncRNA 0.000000 0.325991 561_WT_peak_4898 chr22 37177956 37178126 + 67 NA Intergenic Intergenic -5864 NR_033531 11020 Hs.415172 NM_006860 ENSG00000100360 IFT27 BBS19|RABL4|RAYL intraflagellar transport 27 protein-coding 0.041176 0.479532 -5(CTTGGCGG,+,0.00) 561_WT_peak_7160 chr8 133930543 133930737 + 67 NA intron (NM_003235, intron 20 of 47) intron (NM_003235, intron 20 of 47) 51435 NM_003235 7038 Hs.654591 NM_003235 HPRD:01782 TG AITD3|TGN thyroglobulin protein-coding 0.015464 0.441026 561_WT_peak_4612 chr20 33872393 33872751 + 67 NA promoter-TSS (NM_001267810) promoter-TSS (NM_001267810) 47 NR_052023 3692 Hs.743992 NM_002212 HPRD:04221 EIF6 CAB|EIF3A|ITGB4BP|b(2)gcn|eIF-6|p27(BBP)|p27BBP eukaryotic translation initiation factor 6 protein-coding 0.083799 0.676880 -7(CGCACGCG,-,0.00) -79(CCGACCCA,+,0.00) -161(TCCCGGCCCC,+,0.00) 115(CGGCGGAC,+,0.00) 10(CCTTGGACTCCC,-,0.00) 155(GCCTGGCCCCAC,-,0.00) 81(CCGCCACG,-,0.00) 153(CCGCCTGGCCCC,-,0.00) 561_WT_peak_5616 chr4 149363805 149364074 + 67 NA promoter-TSS (NM_001166104) promoter-TSS (NM_001166104) -267 NM_001166104 4306 Hs.163924 NM_000901 HPRD:02991 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3, group C, member 2 protein-coding 0.085502 0.629630 -10(CTCGGCCGCC,-,0.00) -13(TCGCTCGG,-,0.00),32(CTGACCGA,+,0.00) -63(GCCGGGCG,+,0.00) 89(CGGTTTTT,-,0.00) -30(CGCTGCCCCCAC,-,0.00) 561_WT_peak_3445 chr18 13675079 13675155 + 67 NA intron (NM_001098801, intron 3 of 4) intron (NM_001098801, intron 3 of 4) 33360 NM_001276251 753 Hs.731853 NM_004338 HPRD:07358 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding 0.013158 0.337662 561_WT_peak_4324 chr2 149267043 149267082 + 67 NA intron (NM_018328, intron 13 of 14) intron (NM_018328, intron 13 of 14) -135498 NM_015630 26122 Hs.23270 NM_015630 HPRD:13274 EPC2 EPC-LIKE enhancer of polycomb homolog 2 (Drosophila) protein-coding 0.025641 0.650000 -135(GCTCCGGAGC,+,0.00),-135(GCTCCGGAGC,-,0.00) 561_WT_peak_5787 chr5 68338869 68339045 + 67 NA Intergenic Intergenic -50819 NM_001251969 64924 Hs.631975 NM_022902 HPRD:06381 SLC30A5 ZNT5|ZNTL1|ZTL1|ZnT-5 solute carrier family 30 (zinc transporter), member 5 protein-coding 0.017045 0.406780 -138(CCTACCGA,+,0.00) 561_WT_peak_2918 chr16 79662511 79662718 + 67 NA Intergenic Intergenic -27992 NM_001031804 4094 Hs.134859 NM_005360 HPRD:01518 MAF CCA4|c-MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding 0.009662 0.447115 13(AGACACTT,-,0.00) 561_WT_peak_6101 chr6 11366890 11366984 + 66 NA intron (NR_073131, intron 1 of 9) intron (NR_073131, intron 1 of 9) 15644 NM_001142393 4739 Hs.37982 NM_006403 HPRD:11888 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding 0.031915 0.505263 561_WT_peak_3947 chr2 3523097 3523362 + 66 NA exon (NM_018269, exon 1 of 4) exon (NM_018269, exon 1 of 4) 121 NM_018269 55256 Hs.502773 NM_018269 HPRD:17607 ADI1 APL1|ARD|Fe-ARD|MTCBP1|Ni-ARD|SIPL|mtnD acireductone dioxygenase 1 protein-coding 0.139623 0.725564 -75(GGCGGCCGGG,+,0.00) -162(GGCGTCGC,-,0.00),-32(GGCGTCGT,-,0.00),75(GGCGTGGA,-,0.00) -129(CGCGTACC,+,0.00) -48(GCCGCGGG,+,0.00) 48(CGTCGGCC,+,0.00) -77(TGGGCGGC,-,0.00) 31(GGGCCGCGCT,+,0.00) 561_WT_peak_5714 chr5 42950712 42951049 + 66 NA Intergenic Intergenic 42555 NR_104643 643977 Hs.535791 NR_104643 FLJ32255 - uncharacterized LOC643977 ncRNA 0.035608 0.458580 -157(CATCGCTA,+,0.00) -134(AAAAACCG,+,0.00) 103(GCAGCCAGGGCC,+,0.00) 561_WT_peak_7218 chr9 19126929 19127340 + 66 NA intron (NM_001122, intron 1 of 7) intron (NM_001122, intron 1 of 7) 470 NR_038064 123 Hs.3416 NM_001122 HPRD:00057 PLIN2 ADFP|ADRP perilipin 2 protein-coding 0.075426 0.601942 -131(CCCGGGAGGCGG,-,0.00) -43(CGGTTTTC,-,0.00) -128(GGGAGGCGGAGG,+,0.00) 155(GCGAGGCGAGCG,+,0.00) 152(GCCGCGAGGC,+,0.00) 561_WT_peak_4234 chr2 100106813 100107038 + 66 NA promoter-TSS (NM_001037872) promoter-TSS (NM_001037872) -445 NM_001037872 51455 Hs.443077 NM_016316 HPRD:16202 REV1 REV1L REV1, polymerase (DNA directed) protein-coding 0.093333 0.637168 -87(CCGCGCCTGCCC,+,0.00) -84(CGCCTGCCCCGC,-,0.00) -141(CGCGGCTCTTCG,-,0.00),-111(CGCCGCTCCGTG,-,0.00) -77(CCCGCCTTGGGG,+,0.00) 561_WT_peak_4035 chr2 40005945 40006028 + 66 NA intron (NR_028102, intron 1 of 10) intron (NR_028102, intron 1 of 10) 430 NM_025264 80745 Hs.468254 NM_025264 HPRD:15506 THUMPD2 C2orf8 THUMP domain containing 2 protein-coding 0.000000 0.369048 561_WT_peak_633 chr1 176176137 176176316 + 66 NA 5' UTR (NM_022457, exon 1 of 20) 5' UTR (NM_022457, exon 1 of 20) 154 NM_001001740 64326 Hs.523744 NM_022457 HPRD:07455 RFWD2 COP1|RNF200 ring finger and WD repeat domain 2, E3 ubiquitin protein ligase protein-coding 0.083799 0.638889 -156(GGAGGAGAGGGA,-,0.00) -130(CTCCGCCGCC,-,0.00) -15(GTCCCACG,-,0.00) 561_WT_peak_1813 chr12 96336367 96336570 + 66 NA promoter-TSS (NM_152435) promoter-TSS (NM_152435) -40 NM_182496 120935 Hs.210377 NM_182496 HPRD:08268 CCDC38 - coiled-coil domain containing 38 protein-coding 0.093596 0.725490 -91(TCCCCCTCCTCC,+,0.00) -48(CCGCGTCCCGGG,+,0.00) -66(CCCTCGGCTCGC,-,0.00) 561_WT_peak_2275 chr14 72022377 72022559 + 66 NA intron (NM_015556, intron 1 of 21) Tigger1|DNA|TcMar-Tigger 26439 NM_001284245 26037 Hs.654657 NM_015556 HPRD:11559 SIPA1L1 E6TP1 signal-induced proliferation-associated 1 like 1 protein-coding 0.005495 0.442623 -128(AGACACCT,-,0.00) 561_WT_peak_621 chr1 172608604 172608787 + 66 NA Intergenic Intergenic -19490 NM_000639 356 Hs.2007 NM_000639 HPRD:00610 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6 Fas ligand (TNF superfamily, member 6) protein-coding 0.027322 0.543478 4(TGGGCGGC,-,0.00) 561_WT_peak_1452 chr11 93394889 93395136 + 66 NA intron (NM_033395, intron 1 of 29) CpG 196 NM_033395 85459 Hs.458418 NM_033395 ENSG00000166004 KIAA1731 - KIAA1731 protein-coding 0.072874 0.649194 65(TGGCGGCT,+,0.00) 55(GCGGTCGG,-,0.00) 25(CTCAGGCTCCGC,-,0.00) 30(GCTCCGCAGG,-,0.00) 561_WT_peak_7284 chr9 70490007 70490266 + 66 NA promoter-TSS (NR_104600) promoter-TSS (NR_104600) 75 NM_001024916 220869 Hs.355950 NM_001024916 HPRD:14134 CBWD5 DC36 COBW domain containing 5 protein-coding 0.092664 0.657692 -40(CGCGCACG,+,0.00) -93(CGGCACGT,-,0.00) -88(CGTCCCTA,+,0.00),13(TCGCGACG,-,0.00),16(CGACGCTA,+,0.00) -42(GCCGCGCA,+,0.00) -17(CCGGCCTGGCCG,+,0.00) 561_WT_peak_1776 chr12 76414601 76415043 + 66 NA Intergenic Intergenic 10734 NM_007350 22822 Hs.602085 NM_007350 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology-like domain, family A, member 1 protein-coding 0.015837 0.406321 -117(CAGTTTTG,-,0.00),199(CATAACCG,+,0.00) 57(ATTTCCTGTTTC,-,0.00) 561_WT_peak_1252 chr11 35187350 35187809 + 66 NA intron (NM_001202555, intron 1 of 9) intron (NM_001202555, intron 1 of 9) 27162 NM_001202556 960 Hs.502328 NM_000610 HPRD:00115 CD44 CDW44|CSPG8|ECMR-III|HCELL|HUTCH-I|IN|LHR|MC56|MDU2|MDU3|MIC4|Pgp1 CD44 molecule (Indian blood group) protein-coding 0.008715 0.423913 -140(CCCCCGGC,-,0.00) 85(CAAAACCA,+,0.00) 561_WT_peak_1637 chr12 28343128 28343586 + 66 NA Intergenic CpG -66776 NM_018318 55297 Hs.653125 NM_018318 HPRD:16905 CCDC91 p56 coiled-coil domain containing 91 protein-coding 0.072052 0.649237 105(TCGAAGCC,+,0.00) 189(TGTACGCG,-,0.00),193(CGCGTAGG,+,0.00) 250(GCGGCGGCAGCG,+,0.00) 147(GGGCCGCGGT,+,0.00) 71(CTTGGCGG,+,0.00) 68(GGCCTTGGCGGA,-,0.00) 242(GCGGCGCAGC,+,0.00),242(GCGGCGCAGC,-,0.00) 561_WT_peak_4076 chr2 55509298 55509546 + 66 NA promoter-TSS (NR_027258) promoter-TSS (NR_027258) -33 NR_027258 344405 Hs.445292 NM_001080459 ENSG00000162997 PRORSD1P NCRNA00117|PRDXDD1P|Prdxdd1|Ybakd1 prolyl-tRNA synthetase associated domain containing 1, pseudogene pseudo 0.129032 0.710843 -75(GTCGGCCGAG,+,0.00) 15(TAGCGGCT,+,0.00) -78(GGCGTCGG,-,0.00) -37(TCGGTCTG,-,0.00) -25(GCCGCGGG,+,0.00) -14(CCGTGCCG,+,0.00),7(CGCCACGA,-,0.00) -76(CGTCGGCC,+,0.00) -31(TGCGCAGC,-,0.00) -31(TGCGCAGCCGCG,+,0.00),16(AGCGGCTCCACG,-,0.00) 561_WT_peak_7317 chr9 82432362 82432539 + 66 NA Intergenic Intergenic -6995 NR_121213 101927477 Hs.571630 NR_121212 LINC01507 - long intergenic non-protein coding RNA 1507 ncRNA 0.011299 0.398876 -6(AAGCCGTT,+,0.00) 561_WT_peak_6056 chr5 180615362 180615563 + 66 NA Intergenic tRNA-Val-GTY|tRNA|tRNA 3446 NR_108031 102577426 Hs.277359 NR_108031 LOC102577426 - uncharacterized LOC102577426 ncRNA 0.069652 0.509901 11(CGGGTACG,+,0.00) -100(CGGTTTCG,-,0.00) 561_WT_peak_1853 chr12 110906950 110907230 + 66 NA promoter-TSS (NM_001164372) promoter-TSS (NM_001164372) -564 NM_001164372 51184 Hs.634680 NM_016301 HPRD:17498 GPN3 ATPBD1C GPN-loop GTPase 3 protein-coding 0.064286 0.647687 -144(CAGTTTTG,-,0.00) 63(CGAGGCGG,+,0.00) 4(GCTGCGAGCC,+,0.00) 561_WT_peak_4206 chr2 95873142 95873429 + 66 NA Intergenic CpG 42123 NM_001017396 7549 Hs.590916 NM_021088 HPRD:11834 ZNF2 A1-5|ZNF661|Zfp661 zinc finger protein 2 protein-coding 0.087108 0.666667 111(GGAGGAGGGTGG,-,0.00) 108(CCGGGAGGAGGG,-,0.00) -161(TCGGTCAG,-,0.00) -151(GCGTGCCG,+,0.00),-143(CGGCAAGA,-,0.00) -17(CGGCGCTA,+,0.00) 22(CGTCGGGC,+,0.00) -92(CGGTGTTG,-,0.00) -68(GCCGCGCC,+,0.00) -135(AACGCAGCCC,-,0.00) -70(CAGCCGCGCCCC,-,0.00) 561_WT_peak_6133 chr6 25405171 25405354 + 66 NA intron (NM_017640, intron 2 of 36) intron (NM_017640, intron 2 of 36) 125606 NM_001173977 55604 Hs.649550 NM_017640 HPRD:11285 LRRC16A CARMIL|CARMIL1|CARMIL1a|LRRC16|dJ501N12.1|dJ501N12.5 leucine rich repeat containing 16A protein-coding 0.010929 0.429348 561_WT_peak_2521 chr15 66662347 66662656 + 66 NA Intergenic Intergenic -13447 NM_001289986 54962 Hs.744308 NM_017858 TIPIN - TIMELESS interacting protein protein-coding 0.019417 0.448387 124(AGCCACAT,-,0.00) 15(AGGGTAAA,+,0.00) 561_WT_peak_163 chr1 33458286 33458475 + 66 NA Intergenic Intergenic -27966 NM_001127361 127544 Hs.591504 NM_153341 HPRD:13725 RNF19B IBRDC3|NKLAM ring finger protein 19B protein-coding 0.000000 0.510526 561_WT_peak_2876 chr16 68056931 68057163 + 66 NA exon (NM_018380, exon 1 of 1) exon (NM_018380, exon 1 of 1) 200 NM_001271762 54920 Hs.534460 NM_017803 HPRD:08624 DUS2 DUS2L|SMM1|URLC8 dihydrouridine synthase 2 protein-coding 0.125000 0.682403 51(CGGACGCG,-,0.00) 24(CGGGAGAAGCGC,+,0.00) -50(GCGGCGCCAGGA,+,0.00) -7(CGGCCGCGTT,+,0.00) -54(CGTCGCGG,+,0.00) 561_WT_peak_5325 chr3 172280644 172280918 + 66 NA Intergenic (GA)n|Simple_repeat|Simple_repeat -39484 NM_001190942 8743 Hs.478275 NM_003810 HPRD:04670 TNFSF10 APO2L|Apo-2L|CD253|TL2|TRAIL tumor necrosis factor (ligand) superfamily, member 10 protein-coding 0.014599 0.425455 -86(GGGCGGAGTGGG,-,0.00) 561_WT_peak_6091 chr6 5831578 5831779 + 66 NA Intergenic Intergenic -136173 NR_110842 101927950 Hs.571136 NR_110842 ENSG00000270174 LOC101927950 - uncharacterized LOC101927950 ncRNA 0.009950 0.579208 -17(GGGCTGCCAGGG,-,0.00) 561_WT_peak_1121 chr10 102672346 102672524 + 66 NA 5' UTR (NM_001136123, exon 1 of 19) 5' UTR (NM_001136123, exon 1 of 19) 109 NM_001243770 55719 Hs.447458 NM_018121 HPRD:12581 FAM178A C10orf6 family with sequence similarity 178, member A protein-coding 0.112360 0.720670 -12(GGCGGCCGGG,+,0.00) -15(CGAGGCGG,+,0.00) -18(GGCCGAGGCGGC,-,0.00) 561_WT_peak_6785 chr7 102066880 102067152 + 66 NA non-coding (NR_038967, exon 9 of 9) non-coding (NR_038967, exon 9 of 9) -6961 NM_001126340 80228 Hs.363308 NM_032831 HPRD:09860 ORAI2 C7orf19|CBCIP2|MEM142B|TMEM142B ORAI calcium release-activated calcium modulator 2 protein-coding 0.022059 0.465201 -57(CTCTCTGAGCCC,+,0.00) -135(TGGTTTTG,-,0.00) 561_WT_peak_3990 chr2 26101156 26101372 + 66 NA promoter-TSS (NM_018263) promoter-TSS (NM_018263) 48 NM_018263 55252 Hs.119815 NM_018263 HPRD:10676 ASXL2 ASXH2 additional sex combs like transcriptional regulator 2 protein-coding 0.092593 0.677419 -80(GGCGGGGG,+,0.00) -151(TTTTCCCG,-,0.00) -69(TGCGCGGG,-,0.00) -145(CGCGGTGCCGGG,+,0.00) 561_WT_peak_6354 chr6 56911591 56911833 + 66 NA 5' UTR (NM_001286276, exon 1 of 4) 5' UTR (NM_001286276, exon 1 of 4) 167 NM_001286276 57691 Hs.709521 NM_020931 HPRD:17218 KIAA1586 - KIAA1586 protein-coding 0.095041 0.674897 -108(GGCCTGGTGCTC,-,0.00) 2(CGCCCGGC,-,0.00) 58(GAGCGACG,-,0.00) 45(GCTGGGCCAGTG,+,0.00) -60(GGGCCGAGCC,+,0.00) -139(CCGCGAAG,-,0.00) -97(CCGTCGCAGC,-,0.00) 561_WT_peak_4568 chr20 17512049 17512241 + 66 NA promoter-TSS (NM_001195) promoter-TSS (NM_001195) -131 NM_001195 631 Hs.129702 NM_001195 HPRD:04494 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1, filensin protein-coding 0.098958 0.626943 -146(CCCCCGGC,-,0.00) -95(CGCTGGGCCCGG,-,0.00) -60(GGCCCGCTTT,+,0.00) 561_WT_peak_7423 chr9 127951759 127952308 + 66 NA 5' UTR (NM_001123355, exon 1 of 8) 5' UTR (NM_001123355, exon 1 of 8) 185 NM_002721 5537 Hs.744091 NM_002721 HPRD:02141 PPP6C PP6|PP6C protein phosphatase 6, catalytic subunit protein-coding 0.114754 0.681818 136(GGCGGAGGCCGA,-,0.00) 319(GGACCCGTAGTC,+,0.00) -49(CGGCGGGCGCCC,-,0.00) -80(GGCGGGGG,+,0.00),240(CGCCCGGC,-,0.00),335(GCCGCGGG,+,0.00) 63(TAGCGGCG,-,0.00),232(CGTCGGTA,+,0.00) 192(TGCGCAGC,-,0.00) 101(GCGGCGGCGGCG,+,0.00),125(GCGGCGGCAGCG,+,0.00) 561_WT_peak_2111 chr14 20774055 20774226 + 66 NA promoter-TSS (NM_138376) promoter-TSS (NM_138376) 13 NM_138376 91875 Hs.98553 NM_138376 TTC5 Strap tetratricopeptide repeat domain 5 protein-coding 0.052632 0.552326 -55(AGCGACAT,-,0.00) 561_WT_peak_808 chr1 235490646 235490840 + 66 NA promoter-TSS (NM_001206794) promoter-TSS (NM_001206794) 59 NM_001206794 51742 Hs.575782 NM_016374 HPRD:10661 ARID4B BCAA|BRCAA1|RBBP1L1|RBP1L1|SAP180 AT rich interactive domain 4B (RBP1-like) protein-coding 0.128866 0.774359 16(GGCCCCGGAGGC,+,0.00) -78(GAGCCCCTGCCC,+,0.00) -159(CGCGTCCG,+,0.00) -154(CCGAGCGA,+,0.00) -139(GCCGGGGG,+,0.00),-104(GCCGCGGG,+,0.00),-10(GCCGCGGG,+,0.00) -20(ATCTGGCCCCGC,-,0.00),-7(GCGGGGACAACG,+,0.00) -44(CCGACAAG,-,0.00) -15(GCCCCGCCGC,-,0.00) 561_WT_peak_7215 chr9 15510659 15510840 + 66 NA promoter-TSS (NM_021144) promoter-TSS (NM_021144) 254 NM_033222 11168 Hs.658434 NM_021144 HPRD:04688 PSIP1 DFS70|LEDGF|PAIP|PSIP2|p52|p75 PC4 and SFRS1 interacting protein 1 protein-coding 0.138122 0.802198 -111(CTCGGCCCCC,-,0.00) -94(CCGGGCGGGCCG,-,0.00) -56(GCGACGCC,+,0.00),6(GGCGCCGA,-,0.00) 0(GCCGCGGG,+,0.00) -58(GAGCGACG,-,0.00) -104(CCCTCGGCTCCC,-,0.00) -88(GGGCCGCGTC,+,0.00) -93(CGGGCGGGCCGC,-,0.00) 561_WT_peak_4011 chr2 29092983 29093212 + 66 NA promoter-TSS (NM_017910) promoter-TSS (NM_017910) 78 NM_017910 55006 Hs.468026 NM_017910 HPRD:07935 TRMT61B - tRNA methyltransferase 61 homolog B (S. cerevisiae) protein-coding 0.082969 0.621739 -57(GAGCCCCTGCCG,+,0.00) -23(CGGCACCA,-,0.00) 561_WT_peak_4172 chr2 86080196 86080545 + 66 NA intron (NM_001042437, intron 3 of 6) intron (NM_001042437, intron 3 of 6) 14423 NM_001042437 8869 Hs.415117 NM_003896 HPRD:05098 ST3GAL5 SATI|SIAT9|SIATGM3S|ST3GalV ST3 beta-galactoside alpha-2,3-sialyltransferase 5 protein-coding 0.017192 0.477143 163(GGGCTGGCAGGG,-,0.00) -90(CCAAACCG,+,0.00),75(CAAAACCC,+,0.00) -122(GGGCCAAGTT,+,0.00) 561_WT_peak_4985 chr3 4818569 4818856 + 66 NA intron (NM_001168272, intron 46 of 60) intron (NM_001168272, intron 46 of 60) -25438 NR_004428 100126791 Hs.663059 NR_004428 ENSG00000235947 EGOT EGO|NCRNA00190 eosinophil granule ontogeny transcript (non-protein coding) ncRNA 0.003484 0.388889 561_WT_peak_5033 chr3 18782634 18782842 + 65 NA Intergenic Intergenic 296009 NR_125803 101927777 Hs.543235 NR_125803 SATB1-AS1 - SATB1 antisense RNA 1 ncRNA 0.028846 0.397129 -63(GCTTCCTCTTTG,-,0.00) 561_WT_peak_3983 chr2 25016073 25016296 + 65 NA promoter-TSS (NM_024322) promoter-TSS (NM_024322) 9 NM_001199803 79172 Hs.731569 NM_024322 HPRD:14414 CENPO CENP-O|ICEN-36|MCM21R centromere protein O protein-coding 0.089686 0.656250 -7(CCTACTCCCCGG,+,0.00) 19(AGGGCGGGGC,-,0.00) -60(CCTGCGGCTCCG,-,0.00) -58(TGCGGCTCCGCC,-,0.00) -55(GGCTCCGCCC,-,0.00) -163(GCCGCGGTGGCC,+,0.00),36(GCCGCCATGCTT,+,0.00) 561_WT_peak_3563 chr19 1897432 1897778 + 65 NA Intergenic Intergenic -7766 NM_138422 113179 Hs.144980 NM_138422 HPRD:14000 ADAT3 FWP005|MRT36|MST121|MSTP121|S863-5|TAD3 adenosine deaminase, tRNA-specific 3 protein-coding 0.054913 0.573487 -57(CTCGGCCTCC,-,0.00) -122(TAGAGACG,-,0.00) 561_WT_peak_1913 chr12 124086579 124086756 + 65 NA promoter-TSS (NM_020936) promoter-TSS (NM_020936) -5 NM_020936 57696 Hs.286173 NM_020936 HPRD:13130 DDX55 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 protein-coding 0.118644 0.707865 -89(CGCGTTCG,+,0.00) -74(GCGACCGA,+,0.00) -72(GACCGACG,-,0.00) -69(CGACGCGG,+,0.00) -53(CGCGCCATGGAG,+,0.00) -65(GCGGCGAAGG,+,0.00) 561_WT_peak_4724 chr20 62289798 62289975 + 65 NA intron (NM_001283009, intron 1 of 34) CpG 723 NM_032957 51750 Hs.745057 NM_016434 HPRD:15281 RTEL1 C20orf41|DKCA4|DKCB5|NHL|RTEL regulator of telomere elongation helicase 1 protein-coding 0.112994 0.634831 -122(AAGTGGTT,+,0.00) -97(CGTAGGCG,-,0.00) -36(GCCGCGGG,+,0.00) -84(CGGTTTTT,-,0.00) -112(TTTACCCG,-,0.00) -42(CTCGGGGCCGCG,+,0.00),-34(CGCGGGTCGGCG,-,0.00) -62(CCGGCAGGCCCC,-,0.00) 561_WT_peak_5011 chr3 13053351 13053551 + 65 NA intron (NM_001134382, intron 1 of 14) intron (NM_001134382, intron 1 of 14) -44253 NM_014869 9922 Hs.475506 NM_014869 HPRD:11052 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding 0.010000 0.537313 561_WT_peak_7614 chrX 133320745 133320947 + 65 NA Intergenic Intergenic -16538 NR_029523 406899 NR_029523 miRBase:MI0000113 MIR106A MIRN106A|mir-106 microRNA 106a ncRNA 0.004950 0.339901 561_WT_peak_2178 chr14 39572295 39572509 + 65 NA promoter-TSS (NM_006364) promoter-TSS (NM_006364) 35 NM_006364 10484 Hs.272927 NM_006364 HPRD:06714 SEC23A CLSD Sec23 homolog A (S. cerevisiae) protein-coding 0.088785 0.711628 -41(TGGCTGGCGCCG,-,0.00) 5(AGGGCAGGAA,-,0.00),25(AGGGGCGGGC,-,0.00) -54(CGCCCGGC,-,0.00) -135(TCCTCTCCGCCC,+,0.00) -40(GGCTGGCGCCGC,-,0.00) -164(CCGTCGCAGC,-,0.00) 561_WT_peak_7478 chr9 137283130 137283344 + 65 NA intron (NM_001291920, intron 1 of 9) intron (NM_001291920, intron 1 of 9) 11980 NR_039816 100616236 NR_039816 MIR4669 - microRNA 4669 ncRNA 0.037383 0.609302 -25(GAAACAAGAATC,+,0.00) -124(AGAGCCGCCC,-,0.00) 561_WT_peak_2296 chr14 75714303 75714577 + 65 NA Intergenic Intergenic -31041 NM_005252 2353 Hs.25647 NM_005252 HPRD:01275 FOS AP-1|C-FOS|p55 FBJ murine osteosarcoma viral oncogene homolog protein-coding 0.032847 0.458182 -101(GGCGGGGG,+,0.00) -58(CGTCGGAG,+,0.00) 95(CTGGTAAA,+,0.00) -37(ATTTCCTGTTTC,-,0.00) 4(CCCCCGCAGC,-,0.00) 561_WT_peak_6528 chr6 157375636 157375841 + 65 NA intron (NM_020732, intron 5 of 19) intron (NM_020732, intron 5 of 19) -274873 NR_039676 100616154 NR_039676 miRBase:MI0016817 MIR4466 - microRNA 4466 ncRNA 0.000000 0.422330 -38(AAGTGGTT,+,0.00) 561_WT_peak_787 chr1 231108709 231108927 + 65 NA intron (NM_024525, intron 1 of 22) intron (NM_024525, intron 1 of 22) 5800 NM_001122835 79573 Hs.424788 NM_024525 HPRD:15578 TTC13 - tetratricopeptide repeat domain 13 protein-coding 0.004587 0.424658 -138(AGCGACTT,-,0.00) 561_WT_peak_1382 chr11 66406114 66406404 + 65 NA intron (NM_002896, intron 1 of 3) CpG 171 NM_002896 5936 Hs.523822 NM_002896 HPRD:03982 RBM4 LARK|RBM4A|ZCCHC21|ZCRB3A RNA binding motif protein 4 protein-coding 0.072414 0.621993 -50(GACTCCGAGCCT,-,0.00) -96(CGTCCGCG,-,0.00) 81(TGCGCGGT,-,0.00) 561_WT_peak_6321 chr6 42358048 42358309 + 65 NA intron (NM_033502, intron 2 of 17) intron (NM_033502, intron 2 of 17) 61611 NM_001297573 55809 Hs.485392 NM_018415 HPRD:11647 TRERF1 BCAR2|HSA277276|RAPA|TREP132|TReP-132|dJ139D8.5 transcriptional regulating factor 1 protein-coding 0.022989 0.423664 36(ACTTCCTGTTGC,-,0.00) 561_WT_peak_4889 chr22 32057843 32058122 + 65 NA Intergenic CpG -31172 NM_014338 23761 Hs.420559 NM_014338 HPRD:17854 PISD DJ858B16|PSD|PSDC|PSSC|dJ858B16.2 phosphatidylserine decarboxylase protein-coding 0.068100 0.592857 -2(AGGTGGCT,+,0.00) 561_WT_peak_893 chr10 15139107 15139334 + 65 NA promoter-TSS (NM_006414) promoter-TSS (NM_006414) 41 NM_001265601 10557 Hs.94986 NM_006414 HPRD:09360 RPP38 - ribonuclease P/MRP 38kDa subunit protein-coding 0.114537 0.671053 -81(GTTTCCGGGTCG,-,0.00) 6(CTTCCTCCCCGG,+,0.00) 43(GGGAGGCGAGGG,+,0.00) -96(GGGCCTCGTT,+,0.00),-58(GGGCCGCTTT,+,0.00) 561_WT_peak_2856 chr16 57635758 57636292 + 65 NA Intergenic L1ME2|LINE|L1 -17580 NM_001290142 9289 Hs.513633 NM_005682 HPRD:06824 GPR56 BFPP|BPPR|TM7LN4|TM7XN1 G protein-coupled receptor 56 protein-coding 0.014981 0.448598 167(CAAAACCA,+,0.00) 561_WT_peak_3167 chr17 38255354 38255791 + 65 NA intron (NM_021724, intron 1 of 7) CpG 1406 NM_021724 9572 Hs.724 NM_021724 HPRD:03873 NR1D1 EAR1|THRA1|THRAL|ear-1|hRev nuclear receptor subfamily 1, group D, member 1 protein-coding 0.089245 0.687215 -68(CCGCCCTCCTCG,+,0.00) 69(GTTGCCGGGGCG,-,0.00) 82(CCGGGGGGGCGG,-,0.00),201(GAGCCCTCCCGG,+,0.00) -76(TCGAGGCC,+,0.00) 17(CCGAACGA,+,0.00) -71(GCCCCGCCCT,+,0.00),241(CGGGCCGGGC,-,0.00) 240(TCGGGCCG,+,0.00) 88(GGGCGGAGCT,+,0.00) 561_WT_peak_1307 chr11 60928870 60929076 + 65 NA promoter-TSS (NM_017966) promoter-TSS (NM_017966) -57 NM_017966 55048 Hs.523715 NM_017966 HPRD:15652 VPS37C - vacuolar protein sorting 37 homolog C (S. cerevisiae) protein-coding 0.165049 0.758454 -156(TCGCCGCC,+,0.00) 18(TCGTGCCA,+,0.00) -64(GTCCGGCG,-,0.00) -141(CGGGTTAA,+,0.00) -127(GCCGCGCC,+,0.00) -161(CGCCGTCGCCGC,-,0.00),-41(TGCTCGCCCCGC,-,0.00) -13(CCGCCTCG,-,0.00) -163(GCCGCCGTCGCC,+,0.00) -105(CCGCCAGGCCCG,-,0.00) 561_WT_peak_2917 chr16 79349965 79350201 + 65 NA Intergenic Intergenic 284539 NM_005360 4094 Hs.134859 NM_005360 HPRD:01518 MAF CCA4|c-MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding 0.025424 0.443038 14(CAAAACAG,+,0.00) 561_WT_peak_1150 chr10 115933706 115933891 + 65 NA TTS (NR_031747) TTS (NR_031747) 140 NR_031747 100302224 NR_031747 miRBase:MI0010629 MIR2110 hsa-mir-2110 microRNA 2110 ncRNA 0.054054 0.639785 -106(AGACACTT,-,0.00) 561_WT_peak_1331 chr11 64038707 64038951 + 65 NA intron (NM_032989, intron 3 of 3) intron (NM_032989, intron 3 of 3) -12982 NM_001170726 56834 Hs.523763 NM_020155 HPRD:12600 GPR137 C11orf4|GPR137A|TM7SF1L1 G protein-coupled receptor 137 protein-coding 0.016393 0.559184 10(GGCGGGGG,+,0.00) 561_WT_peak_6127 chr6 24952208 24952397 + 65 NA intron (NM_001286446, intron 1 of 13) intron (NM_001286446, intron 1 of 13) -16022 NM_001286445 9750 Hs.559459 NM_014722 HPRD:12881 FAM65B C6orf32|DIFF40|DIFF48|MYONAP|PL48 family with sequence similarity 65, member B protein-coding 0.005291 0.384211 561_WT_peak_363 chr1 110333456 110333648 + 65 NA Intergenic Intergenic -26908 NM_024526 79574 Hs.485352 NM_024526 HPRD:13277 EPS8L3 EPS8R3 EPS8-like 3 protein-coding 0.020833 0.621762 -65(AGAGGCCT,-,0.00) -144(CTGCCTGCCCGG,+,0.00) 561_WT_peak_5369 chr3 196159038 196159208 + 65 NA intron (NM_015562, intron 1 of 10) CpG 222 NM_015562 26043 Hs.518524 NM_015562 UBXN7 UBXD7 UBX domain protein 7 protein-coding 0.094118 0.660819 -156(CCGACGCC,+,0.00),-147(TCGTCGCC,+,0.00) -111(TGGGTAAA,+,0.00) 561_WT_peak_4215 chr2 97001257 97001563 + 65 NA promoter-TSS (NM_001281712) promoter-TSS (NM_001281712) -69 NM_001281711 23397 Hs.308045 NM_015341 HPRD:03820 NCAPH BRRN1|CAP-H non-SMC condensin I complex, subunit H protein-coding 0.104575 0.635179 -130(TCACCCTGCTCG,+,0.00) 95(AGGCGTCT,+,0.00) -121(TCGACGCT,+,0.00),102(TCGACGCG,+,0.00) 54(GCCCGGCCCG,+,0.00) 49(TGCTGGCCCGGC,-,0.00) 16(CGCGGAGGCCCG,+,0.00) 7(GACGCCGCCC,-,0.00) 561_WT_peak_3289 chr17 60143072 60143324 + 65 NA promoter-TSS (NM_005121) promoter-TSS (NM_005121) -555 NM_005121 9969 Hs.282678 NM_005121 HPRD:07229 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding 0.071429 0.616601 -26(TGGACGCC,+,0.00) -83(TCGTGTCG,+,0.00) -1(GTGGGCCCAGCG,+,0.00) 10(GGGCGGTGTT,+,0.00) -69(GGCCAAGCCGGC,-,0.00) 561_WT_peak_1408 chr11 73490346 73490602 + 65 NA Intergenic Intergenic -8443 NM_016055 51642 Hs.503239 NM_016055 MRPL48 HSPC290|L48MT|MRP-L48 mitochondrial ribosomal protein L48 protein-coding 0.046875 0.571984 -24(GCGACGCC,+,0.00) -26(CAGCGACG,-,0.00) 69(CTCTCGCAGCCC,+,0.00) 561_WT_peak_2224 chr14 55804609 55804807 + 65 NA intron (NM_152231, intron 1 of 1) MIRb|SINE|MIR 65836 NM_152231 55030 Hs.525348 NM_017943 HPRD:16442 FBXO34 Fbx34 F-box protein 34 protein-coding 0.025253 0.402010 561_WT_peak_6198 chr6 27115293 27115495 + 65 NA promoter-TSS (NR_036096) promoter-TSS (NR_036096) -11 NR_036096 100422934 NR_036096 miRBase:MI0014167 MIR3143 - microRNA 3143 ncRNA 0.024752 0.418719 -58(CTTCGCTA,+,0.00) 561_WT_peak_4124 chr2 69872214 69872303 + 65 NA Intergenic Intergenic -1281 NM_014911 22848 Hs.468878 NM_014911 AAK1 - AP2 associated kinase 1 protein-coding 0.011236 0.377778 561_WT_peak_7217 chr9 19102721 19103141 + 65 NA promoter-TSS (NM_001270890) promoter-TSS (NM_001270890) 9 NM_017645 54801 Hs.533468 NM_017645 HPRD:13302 HAUS6 Dgt6|FAM29A HAUS augmin-like complex, subunit 6 protein-coding 0.076190 0.608076 45(GGCGTCCGAG,+,0.00) 170(AGCGACTT,-,0.00) 201(TCGTGCCC,+,0.00) 48(GTCCGAGG,-,0.00) 161(TGCGCGGC,-,0.00) 31(CGCCGGCGCCGC,-,0.00),162(GCGCGGCCAGCG,+,0.00) 119(CCGGCCATGCCC,+,0.00) 561_WT_peak_5360 chr3 188850295 188850482 + 65 NA Intergenic Intergenic -39375 NM_198485 285386 Hs.729544 NM_198485 HPRD:13451 TPRG1 FAM79B tumor protein p63 regulated 1 protein-coding 0.021390 0.468085 -114(CCGACCGC,+,0.00) -160(CAAAACAG,+,0.00) 561_WT_peak_6986 chr8 38244035 38244205 + 65 NA promoter-TSS (NM_001199660) promoter-TSS (NM_001199660) 161 NM_001199659 137994 Hs.696457 NM_144652 HPRD:08060 LETM2 - leucine zipper-EF-hand containing transmembrane protein 2 protein-coding 0.082353 0.690058 -101(CAGGCCCAGCCC,+,0.00) -124(CCGGCCGA,+,0.00),-38(TCGGTCCG,-,0.00) -98(GCCCAGCCCT,+,0.00) -52(CCTCCGGATCCC,-,0.00) -132(CGCGGAGCCCGG,+,0.00) -72(GGGCCGCGCT,+,0.00) -146(CTAGGCGG,+,0.00) 561_WT_peak_5455 chr4 40058496 40058666 + 65 NA promoter-TSS (NM_018177) promoter-TSS (NM_018177) 57 NM_018177 55728 Hs.391463 NM_018177 HPRD:11382 N4BP2 B3BP NEDD4 binding protein 2 protein-coding 0.164706 0.742690 -58(TCGACGAC,+,0.00),-42(GGCTTCGA,-,0.00),-38(TCGACGCC,+,0.00) -155(CCCGCGGC,-,0.00) -60(GTTCGACG,-,0.00) -12(CAGGTAAA,+,0.00) -128(TGCGCGGC,-,0.00) -107(GTGGCGCCGGCG,+,0.00) -78(TGCGGCGCCGCG,+,0.00),-78(TGCGGCGCCGCG,-,0.00) -74(GCGCCGCGTT,+,0.00) -54(CGACGCGG,+,0.00) -88(GCTGCGGACC,+,0.00) 561_WT_peak_5138 chr3 58419335 58419510 + 65 NA non-coding (NR_033384, exon 1 of 9) non-coding (NR_033384, exon 1 of 9) 144 NR_033384 5162 Hs.161357 NM_000925 HPRD:01530 PDHB PDHBD|PDHE1-B|PHE1B pyruvate dehydrogenase (lipoamide) beta protein-coding 0.108571 0.698864 -128(GGCGCGGT,-,0.00) -136(GCGCAGCCGGCG,+,0.00) 561_WT_peak_4170 chr2 85766309 85766636 + 65 NA promoter-TSS (NR_038942) promoter-TSS (NR_038942) 371 NM_005911 4144 Hs.516157 NM_005911 HPRD:03275 MAT2A MATA2|MATII|SAMS2 methionine adenosyltransferase II, alpha protein-coding 0.119266 0.682927 129(CTCGTCCGCC,-,0.00) -47(AACGGCTT,-,0.00) 7(TCGGTCGG,-,0.00) 132(GTCCGCCG,-,0.00) 108(GTGGGGCCCGCG,+,0.00),152(GCGGCGACCGCG,+,0.00) -113(CCGCCTCG,-,0.00) -111(GCCTCGCCGC,-,0.00) 561_WT_peak_3727 chr19 36066495 36066674 + 65 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA -12024 NM_000704 495 Hs.36992 NM_000704 HPRD:00668 ATP4A ATP6A ATPase, H+/K+ exchanging, alpha polypeptide protein-coding 0.027933 0.511111 561_WT_peak_2858 chr16 57683022 57683216 + 65 NA intron (NM_001290142, intron 2 of 13) intron (NM_001290142, intron 2 of 13) 9912 NM_001290144 9289 Hs.513633 NM_005682 HPRD:06824 GPR56 BFPP|BPPR|TM7LN4|TM7XN1 G protein-coupled receptor 56 protein-coding 0.036082 0.589744 -32(GGCGTCGC,-,0.00) -160(CAATACCG,+,0.00) -30(CGTCGCGG,+,0.00) 561_WT_peak_2841 chr16 50776331 50776654 + 65 NA intron (NM_001042412, intron 1 of 17) CpG 463 NM_001042412 1540 Hs.578973 NM_015247 HPRD:05427 CYLD BRSS|CDMT|CYLD1|CYLDI|EAC|MFT|MFT1|SBS|TEM|USPL2 cylindromatosis (turban tumor syndrome) protein-coding 0.102167 0.700617 0(AGGCCGCT,+,0.00) -143(CCGGGAGGGCTG,-,0.00) 76(GGCGTACG,+,0.00) 57(CCTACCGA,+,0.00),61(CCGACCGC,+,0.00),86(CCGATCGA,+,0.00) 69(GCCGCGGG,+,0.00) 91(CGATTTTG,-,0.00) 64(ACCGCGCC,+,0.00) 69(GCCGCGGGGC,+,0.00) 561_WT_peak_4142 chr2 73298637 73298843 + 65 NA exon (NM_144579, exon 1 of 14) exon (NM_144579, exon 1 of 14) 225 NM_144579 94097 Hs.368171 NM_144579 HPRD:18047 SFXN5 BBG-TCC sideroflexin 5 protein-coding 0.082524 0.661836 15(TAGTCGCT,+,0.00) -12(CGGCACTA,-,0.00) 26(TCCGCCATGGCC,+,0.00),28(CGCCATGGCCAC,-,0.00) -101(CCGCCGGCCCGC,-,0.00) 561_WT_peak_2979 chr17 2296644 2297038 + 65 NA intron (NM_020310, intron 4 of 5) CpG 7417 NM_020310 4335 Hs.626579 NM_020310 HPRD:04331 MNT MAD6|MXD6|ROX|bHLHd3 MAX network transcriptional repressor protein-coding 0.111675 0.703797 -75(CTCGGCGGCC,-,0.00) -148(CCGGGAGGGCCC,-,0.00),158(CCGGGGAGGAGG,-,0.00) 216(CGCGAACG,+,0.00) 122(TCGGGCGG,-,0.00) 196(CCCGCGGC,-,0.00) -4(TCGGGCCG,+,0.00) -32(TTTCCCCG,-,0.00),44(GGGGTAAA,+,0.00) -53(GCCGCCCA,+,0.00) -73(CGGCGGCCCCGG,-,0.00) -155(CGCGCAGCCGGG,+,0.00) 55(GGCTCGGCCC,-,0.00) -1(GGCCGTGGCGCC,-,0.00) 65(GCGCCGCAGC,-,0.00) 169(GCGCCGGGCCGC,-,0.00) 561_WT_peak_1737 chr12 57915885 57916387 + 65 NA promoter-TSS (NM_052897) promoter-TSS (NM_052897) -523 NM_052897 114785 Hs.524523 NM_052897 HPRD:11296 MBD6 - methyl-CpG binding domain protein 6 protein-coding 0.033865 0.606362 286(CGCGGAGGGCGG,-,0.00) 79(CTGGGGAGGCGG,-,0.00),286(CGCGGAGGGCGG,-,0.00) 238(AGGGCTGGGA,-,0.00) 293(GGCGGGGG,+,0.00) -125(CGGTTGTG,-,0.00) 88(CGGGTCAA,+,0.00) 300(GGGCCGCGTG,+,0.00) -78(GCTCCGCTGC,-,0.00) 160(GGGGCCTGGCCC,+,0.00) 561_WT_peak_4825 chr22 18560364 18560916 + 65 NA promoter-TSS (NM_001199319) promoter-TSS (NM_001199319) -46 NM_017929 55670 Hs.517400 NM_017929 PEX26 PBD7A|PBD7B|PEX26M1T|Pex26pM1T peroxisomal biogenesis factor 26 protein-coding 0.077899 0.587703 103(GCTTCCGGGGCG,-,0.00) 31(CGGTTTTG,-,0.00) 111(GGCGCGGC,-,0.00) 241(GCTGGGCGAGCG,+,0.00),341(GCGGGGCCGGAG,+,0.00) 229(CGCGGCTGCGGG,-,0.00) 98(GGGCGGCTTC,+,0.00) 233(GCTGCGGGGC,+,0.00) 561_WT_peak_4504 chr2 235199367 235199542 + 65 NA Intergenic Intergenic 206239 NM_005737 10123 Hs.111554 NM_005737 HPRD:11988 ARL4C ARL7|LAK ADP-ribosylation factor-like 4C protein-coding 0.022857 0.539773 -28(AGACACCT,-,0.00) -37(TCGTGCCC,+,0.00) 561_WT_peak_4439 chr2 202117335 202117548 + 65 NA intron (NM_033355, intron 2 of 9) intron (NM_033355, intron 2 of 9) -5313 NM_001080125 841 Hs.599762 NM_001228 HPRD:03459 CASP8 ALPS2B|CAP4|Casp-8|FLICE|MACH|MCH5 caspase 8, apoptosis-related cysteine peptidase protein-coding 0.009390 0.369159 27(CAGTTTTG,-,0.00) 561_WT_peak_3917 chr19 57988701 57988906 + 65 NA 5' UTR (NM_001144068, exon 1 of 4) 5' UTR (NM_001144068, exon 1 of 4) 135 NM_001144068 400720 Hs.388810 NM_001024596 HPRD:18624 ZNF772 - zinc finger protein 772 protein-coding 0.024390 0.533981 -117(AGCGGCTA,-,0.00) 561_WT_peak_2951 chr16 89255510 89255750 + 65 NA intron (NM_004933, intron 7 of 13) (CA)n|Simple_repeat|Simple_repeat 10899 NM_001242757 146429 Hs.447544 NM_001242757 SLC22A31 - solute carrier family 22, member 31 protein-coding 0.029167 0.597510 561_WT_peak_1062 chr10 76585586 76585845 + 65 NA promoter-TSS (NM_001256468) promoter-TSS (NM_001256468) -456 NM_001256469 23522 Hs.35758 NM_012330 HPRD:07065 KAT6B GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding 0.123552 0.734615 -52(GGAGGAGGGGGC,-,0.00) -98(GGCGGGCGAG,+,0.00) -153(GGCCTGGGGCTG,-,0.00),56(GCGCGCCCGCCC,+,0.00) -147(GGGCTGGCAGGG,-,0.00) 561_WT_peak_816 chr1 236687743 236688029 + 65 NA promoter-TSS (NR_034040) promoter-TSS (NR_034040) -78 NR_034040 100287902 Hs.677376 NR_034040 ENSG00000223776 LGALS8-AS1 - LGALS8 antisense RNA 1 ncRNA 0.038462 0.491289 -13(CGTACGTG,-,0.00) 561_WT_peak_887 chr10 12164820 12164992 + 65 NA 3' UTR (NM_018706, exon 17 of 17) 3' UTR (NM_018706, exon 17 of 17) -6734 NM_018144 55176 Hs.112955 NM_018144 HPRD:15317 SEC61A2 - Sec61 alpha 2 subunit (S. cerevisiae) protein-coding 0.000000 0.456647 -72(TTTACCAG,-,0.00) 561_WT_peak_4782 chr21 35789871 35790100 + 65 NA Intergenic HAL1-2a_MD|LINE|L1 -16615 NM_001282537 101928147 Hs.303798 NM_001282537 C21orf140 - chromosome 21 open reading frame 140 protein-coding 0.008734 0.439130 -21(CAAAACCA,+,0.00) 561_WT_peak_892 chr10 14880335 14880626 + 65 NA promoter-TSS (NM_001029954) promoter-TSS (NM_001029954) 321 NR_103464 51182 Hs.534169 NM_016299 HPRD:07021 HSPA14 HSP70-4|HSP70L1 heat shock 70kDa protein 14 protein-coding 0.085911 0.688356 106(CCGGGCAGGCCC,-,0.00) 102(AGGGCCGGGC,-,0.00) -124(TCCTGCCG,+,0.00) 3(CGGTTTTC,-,0.00) -164(TGGGCGGC,-,0.00) -101(CCTCATGGCGGC,-,0.00) -33(GCTGCGGAGC,+,0.00) 561_WT_peak_336 chr1 99337014 99337255 + 65 NA Intergenic Intergenic -132698 NR_033940 100129620 Hs.588631 NR_033940 ENSG00000232825 LOC100129620 - uncharacterized LOC100129620 ncRNA 0.008299 0.417355 -2(TGGAGCCGAAGG,+,0.00) 561_WT_peak_7536 chrX 47518339 47518528 + 65 NA non-coding (NR_045559, exon 1 of 5) non-coding (NR_045559, exon 1 of 5) 146 NR_045560 8409 Hs.172791 NM_004182 HPRD:02209 UXT ART-27|STAP1 ubiquitously-expressed, prefoldin-like chaperone protein-coding 0.052910 0.631579 -83(AATCGGCT,+,0.00) -99(CCCTCTCAACGC,+,0.00) 561_WT_peak_1059 chr10 75910555 75910648 + 65 NA promoter-TSS (NM_001202450) promoter-TSS (NM_001202450) 225 NM_012095 26985 Hs.500104 NM_012095 AP3M1 - adaptor-related protein complex 3, mu 1 subunit protein-coding 0.064516 0.585106 -145(CCGAGAAGGCCG,-,0.00) -164(CCTACCGA,+,0.00) -145(CCGAGAAG,-,0.00) 561_WT_peak_5603 chr4 140586982 140587176 + 65 NA 5' UTR (NM_001204368, exon 1 of 4) 5' UTR (NM_001204368, exon 1 of 4) 157 NM_002413 4258 Hs.81874 NM_002413 HPRD:03436 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding 0.041237 0.523077 -102(AGCCGCTT,-,0.00) -161(GACCGGCAGCCC,+,0.00) -57(TTTACCCG,-,0.00) 561_WT_peak_4461 chr2 209130240 209130594 + 65 NA promoter-TSS (NM_001178000) promoter-TSS (NM_001178000) -574 NM_152671 200576 Hs.744997 NM_015040 HPRD:17852 PIKFYVE CFD|FAB1|HEL37|PIP5K|PIP5K3|ZFYVE29 phosphoinositide kinase, FYVE finger containing protein-coding 0.019774 0.408451 561_WT_peak_7157 chr8 132916493 132916788 + 65 NA intron (NM_015137, intron 1 of 22) CpG 284 NM_015137 23167 Hs.204564 NM_015137 HPRD:17179 EFR3A - EFR3 homolog A (S. cerevisiae) protein-coding 0.138983 0.716216 -80(GCCGGCCGAG,+,0.00) 29(AAGTGTCT,+,0.00) -122(GGCGGCGA,-,0.00) -79(CCGGCCGA,+,0.00) -72(AGGGCCGGGG,-,0.00) -69(GCCGGGGG,+,0.00) -148(TGCGCGGC,-,0.00) -146(CGCGGCCCCGCT,-,0.00),-138(CGCTGAGCCTCG,+,0.00) 6(GGGCCGCGCT,+,0.00) -145(GCGGCCCCGCTG,+,0.00) 561_WT_peak_2852 chr16 57318258 57318457 + 65 NA exon (NM_015993, exon 1 of 4) exon (NM_015993, exon 1 of 4) 227 NM_015993 51090 Hs.632215 NM_015993 HPRD:11854 PLLP PMLP|TM4SF11 plasmolipin protein-coding 0.130653 0.740000 -152(CGGACCGGGAGC,+,0.00) -28(TCGGCGCC,+,0.00) -141(CCCCCGGC,-,0.00) -31(GCTTCGGCGCCC,-,0.00) 20(AACTCGGCCA,-,0.00) -81(CGAGGCGG,+,0.00) 23(TCGGCCATGGCG,+,0.00) 561_WT_peak_6722 chr7 75071699 75072257 + 65 NA intron (NM_001099415, intron 3 of 14) CpG 32373 NR_033322 155400 Hs.436034 NM_001039575 NSUN5P1 NSUN5B|WBSCR20B NOP2/Sun domain family, member 5 pseudogene 1 pseudo 0.137993 0.703041 -5(GTAGGAGGCCGA,-,0.00) 81(ATCGGCCGCC,-,0.00) 232(AGACGCTA,-,0.00) 290(TCAACGCC,+,0.00) 48(CAGCCCCGGCCC,+,0.00) -19(AGGCACGA,-,0.00) 265(CTGTTTTG,-,0.00) 358(CATCCGGCTCCC,-,0.00) 174(ACCGCGCC,+,0.00) 51(CCCCGGCCCCGG,-,0.00) 131(CGCGGCTCCGCG,+,0.00),131(CGCGGCTCCGCG,-,0.00) 24(AGCGCCGCCC,-,0.00) 18(CCGAGAAG,-,0.00),203(CCGCCACG,-,0.00),222(CGACTCGG,+,0.00) 27(GCCGCCCCGGCC,+,0.00) -70(CCACCAGGCCGC,-,0.00),-43(CAGCCAGGCCAG,-,0.00),34(CGGCCGGCCCGC,-,0.00),240(CAGCCCGGCAGC,-,0.00) 561_WT_peak_6642 chr7 37488443 37488654 + 65 NA promoter-TSS (NM_014800) promoter-TSS (NM_014800) 7 NM_014800 9844 Hs.434989 NM_014800 HPRD:12102 ELMO1 CED-12|CED12|ELMO-1 engulfment and cell motility 1 protein-coding 0.085308 0.669811 -116(CGGCTGCCGCTG,-,0.00) -140(TGGGTCGG,-,0.00),-136(TCGGCCGG,-,0.00) 13(CCCCCGGC,-,0.00) 8(CGCCGCCCCCGG,-,0.00) 561_WT_peak_2217 chr14 54976478 54976648 + 65 NA promoter-TSS (NM_006568) promoter-TSS (NM_006568) -24 NM_006568 10668 Hs.59106 NM_006568 HPRD:09366 CGRRF1 CGR19|RNF197 cell growth regulator with ring finger domain 1 protein-coding 0.076471 0.672515 -57(TAGTGGCT,+,0.00) -39(CCGGGCGGGCGG,-,0.00) -40(GCCGGGCG,+,0.00) -49(TTTACCCT,-,0.00) -40(GCCGGGCGGGCG,+,0.00) -10(CTGGGCTCCGCG,-,0.00) -33(GGGCGGGGCT,+,0.00) -6(GCTCCGCGGC,-,0.00) 561_WT_peak_5772 chr5 64858732 64858902 + 65 NA promoter-TSS (NM_001278929) promoter-TSS (NM_001278929) 178 NM_022145 64105 Hs.529778 NM_022145 HPRD:13323 CENPK AF5alpha|CENP-K|P33|Solt centromere protein K protein-coding 0.058824 0.520468 -103(CCGAGAAG,-,0.00) 561_WT_peak_4346 chr2 161339289 161339473 + 65 NA intron (NM_016836, intron 1 of 13) intron (NM_016836, intron 1 of 13) 10937 NM_016836 5937 Hs.470412 NM_002897 HPRD:03814 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding 0.010870 0.421622 -44(CGTCAGAC,+,0.00) 561_WT_peak_1893 chr12 121678365 121678630 + 65 NA 3' UTR (NM_006549, exon 17 of 17) 3' UTR (NM_006549, exon 17 of 17) 30833 NM_002560 5025 Hs.321709 NM_002560 HPRD:09017 P2RX4 P2X4|P2X4R purinergic receptor P2X, ligand-gated ion channel, 4 protein-coding 0.086792 0.650376 20(CGGGGGAGCCGG,-,0.00),28(CCGGGGGCGGGG,-,0.00) 27(GCCGGGGG,+,0.00),33(GGCGGGGG,+,0.00) -112(CGTAGGAC,+,0.00) 23(GGGAGCCGGGGG,+,0.00) -65(CGACGCGG,+,0.00),-27(CTACTCGG,+,0.00) -20(GGCTCCATGGCC,+,0.00) 19(GCGGGGGAGC,+,0.00) 561_WT_peak_3050 chr17 16118570 16119399 + 65 NA promoter-TSS (NM_006311) promoter-TSS (NM_006311) -110 NM_006311 9611 Hs.462323 NM_006311 HPRD:02911 NCOR1 N-CoR|N-CoR1|PPP1R109|TRAC1|hN-CoR nuclear receptor corepressor 1 protein-coding 0.108565 0.713253 528(GAAGCCGGTCCC,-,0.00) 95(CTTGGCCGCC,-,0.00) 154(AGGCGGCT,+,0.00) -96(CCCGGAGGCCGG,-,0.00),524(CAGGGAAGCCGG,-,0.00) 28(TCGTTCGG,-,0.00),308(TCGGACGG,-,0.00) 216(GCCGGGCG,+,0.00),381(CCCCCGCC,-,0.00) 360(TCGTGCCC,+,0.00) 175(CTCCTCCTTCCG,-,0.00) 43(AGTCGGAC,+,0.00),44(GTCGGACG,-,0.00) -40(GGGAGCCGACGT,+,0.00),549(GGGAGCTGGAGG,+,0.00) 34(GGCGCGGC,-,0.00) 63(CGCCGCCGCCGC,-,0.00),66(CGCCGCCGCCGC,-,0.00),156(GCGGCTCCAGCG,+,0.00),211(CGCTGGCCGGGC,-,0.00) 138(CGCGGAGCCGCG,+,0.00),138(CGCGGAGCCGCG,-,0.00) 640(AGGCCGATTT,+,0.00) 41(CGAGTCGG,+,0.00) -77(GGCGCCAGGGCC,+,0.00),-4(GCGGCCACGGCG,+,0.00),-2(GGCCACGGCGCG,-,0.00),90(GCCACCTTGGCC,+,0.00) 288(GCCTGGCAGC,-,0.00) 561_WT_peak_2446 chr15 42066510 42066835 + 65 NA promoter-TSS (NM_001265611) promoter-TSS (NM_001265611) 40 NR_049761 23005 Hs.513661 NM_014994 HPRD:17465 MAPKBP1 JNKBP-1 mitogen-activated protein kinase binding protein 1 protein-coding 0.107692 0.680982 80(CGAACGCG,-,0.00) -26(CCCGCGGC,-,0.00) 15(TCGTGCCA,+,0.00) -35(CCCACCCAGCCC,+,0.00) -59(GCCGCGCC,+,0.00) -115(GGCTCCGCCC,-,0.00),-42(GGCTCCGCCC,-,0.00) 61(GCGGCGGAGC,+,0.00) -33(CACCCAGCCCGC,-,0.00),-23(GCGGCTTGGCCC,+,0.00) 561_WT_peak_5183 chr3 101546472 101546901 + 65 NA promoter-TSS (NM_001005474) promoter-TSS (NM_001005474) -148 NM_001005474 64332 Hs.319171 NM_031419 HPRD:09217 NFKBIZ IKBZ|INAP|MAIL nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta protein-coding 0.046620 0.537209 124(CCCCCGCC,-,0.00) 214(GTCAGACG,-,0.00) -102(CCTGCGGCTCCA,-,0.00) 15(GCCTCGCTGC,-,0.00) 561_WT_peak_3673 chr19 17236489 17236774 + 65 NA intron (NM_001130065, intron 2 of 39) intron (NM_001130065, intron 2 of 39) 50040 NM_004145 4650 Hs.123198 NM_004145 HPRD:03677 MYO9B CELIAC4|MYR5 myosin IXB protein-coding 0.031579 0.608392 561_WT_peak_5872 chr5 109025166 109025447 + 65 NA 5' UTR (NM_002372, exon 1 of 22) 5' UTR (NM_002372, exon 1 of 22) 239 NM_002372 4124 Hs.432822 NM_002372 HPRD:01110 MAN2A1 AMan II|GOLIM7|MANA2|MANII mannosidase, alpha, class 2A, member 1 protein-coding 0.106762 0.705674 -71(TAGCGGCT,+,0.00) 24(GCGCCTCCCCGC,+,0.00),47(CCGGGAGGGGGA,-,0.00) 69(GGCGGGGG,+,0.00) -122(CCGCTTCCGCCG,-,0.00) 21(CCTGCGCCTCCC,-,0.00) 34(GCGGAGCCTGGG,+,0.00) 33(CGCGGAGCCTGG,+,0.00) 561_WT_peak_5232 chr3 122785891 122786247 + 65 NA intron (NR_028444, intron 1 of 15) CpG 213 NR_028444 10954 Hs.477352 NM_006810 HPRD:08334 PDIA5 PDIR protein disulfide isomerase family A, member 5 protein-coding 0.109551 0.753501 16(GGATCCGGGCCG,-,0.00) -106(GCGGGCGGGCGG,-,0.00) 184(TCGCCGCC,+,0.00) -37(CGGGCCGGGC,-,0.00),21(CGGGCCGGGC,-,0.00) -34(GCCGGGCCGGCG,+,0.00),24(GCCGGGCCAGCA,+,0.00) 152(CTACGCGG,+,0.00) -28(CCGGCGTGGCTG,+,0.00) 561_WT_peak_5262 chr3 132440774 132440951 + 65 NA promoter-TSS (NR_002811) promoter-TSS (NR_002811) -324 NR_002811 348808 Hs.586111 NR_002811 ENSG00000248724 NPHP3-AS1 NCRNA00119 NPHP3 antisense RNA 1 ncRNA 0.124294 0.668539 -8(CTCGGCCGCC,-,0.00) -115(AGCCGCTT,-,0.00) -157(GGCGTCGC,-,0.00) -12(CGTACTCG,-,0.00),1(CGCGTACT,+,0.00) -155(CGTCGCGG,+,0.00) -156(GCGTCGCGGC,-,0.00),-88(GCCTCGCGGC,-,0.00) 561_WT_peak_2479 chr15 51057084 51057358 + 65 NA intron (NM_032802, intron 1 of 14) intron (NM_032802, intron 1 of 14) 689 NM_032802 84888 Hs.401537 NM_032802 HPRD:09742 SPPL2A IMP3|PSL2 signal peptide peptidase like 2A protein-coding 0.025547 0.407273 27(AGGGTAAA,+,0.00) 561_WT_peak_3360 chr17 75386436 75386488 + 65 NA intron (NM_001113494, intron 1 of 10) intron (NM_001113494, intron 1 of 10) 6674 NR_036200 100422851 NR_036200 miRBase:MI0015845 MIR4316 - microRNA 4316 ncRNA 0.000000 0.396226 561_WT_peak_6202 chr6 27247981 27248326 + 65 NA Intergenic Intergenic 31858 NM_033482 94026 Hs.729955 NM_033482 ENSG00000158553 POM121L2 POM121-L|POM121L POM121 transmembrane nucleoporin-like 2 protein-coding 0.037681 0.401734 -86(CGGTTTCG,-,0.00) 561_WT_peak_4950 chr22 42476214 42476285 + 65 NA TTS (NM_001002034) TTS (NM_001002034) 554 NM_033318 91689 Hs.306083 NM_033318 HPRD:12385 SMDT1 C22orf32|DDDD|EMRE|dJ186O1.1 single-pass membrane protein with aspartate-rich tail 1 protein-coding 0.014085 0.541667 561_WT_peak_4957 chr22 43253066 43253238 + 65 NA exon (NM_014570, exon 1 of 16) exon (NM_014570, exon 1 of 16) 256 NM_001142293 26286 Hs.685225 NM_014570 HPRD:06444 ARFGAP3 ARFGAP1 ADP-ribosylation factor GTPase activating protein 3 protein-coding 0.098837 0.687861 -124(CCCGCGGC,-,0.00) -19(AGCTGGCCCAGC,-,0.00) -26(GCGGCGCAGC,+,0.00),-26(GCGGCGCAGC,-,0.00) -142(CAGGCAGGCCCG,-,0.00) 561_WT_peak_2970 chr17 1466227 1466422 + 65 NA promoter-TSS (NM_006224) promoter-TSS (NM_006224) -214 NM_006224 5306 Hs.429819 NM_006224 HPRD:02548 PITPNA HEL-S-36|PI-TPalpha|PITPN|VIB1A phosphatidylinositol transfer protein, alpha protein-coding 0.087179 0.632653 -65(GGGCCTCCCCGG,+,0.00) -96(CCGCCACG,-,0.00) -71(GCTGGGGGGC,+,0.00) 561_WT_peak_6055 chr5 180600516 180600710 + 65 NA Intergenic Intergenic 18295 NR_108031 102577426 Hs.277359 NR_108031 LOC102577426 - uncharacterized LOC102577426 ncRNA 0.051546 0.476923 561_WT_peak_7571 chrX 70331242 70331452 + 65 NA exon (NM_000206, exon 1 of 8) exon (NM_000206, exon 1 of 8) 134 NM_000206 3561 Hs.84 NM_000206 HPRD:02391 IL2RG CD132|CIDX|IL-2RG|IMD4|P64|SCIDX|SCIDX1 interleukin 2 receptor, gamma protein-coding 0.014286 0.559242 561_WT_peak_5282 chr3 142297376 142298056 + 65 NA promoter-TSS (NM_001184) promoter-TSS (NM_001184) -48 NM_001184 545 Hs.271791 NM_001184 HPRD:08369 ATR FCTCS|FRP1|MEC1|SCKL|SCKL1 ATR serine/threonine kinase protein-coding 0.076471 0.631424 -105(CAAGCCGGAATC,+,0.00) 127(AAGCCGCT,+,0.00),128(AGCCGCTA,-,0.00),193(AAGCCGTT,+,0.00) 42(GCGGGTTCCCGG,+,0.00) 386(GGCCGCCAGCCC,+,0.00) 91(CCGACGGA,+,0.00),272(CCGAGCGA,+,0.00) -37(AGGGCGGGGA,-,0.00) 278(GAGCGACG,-,0.00) 89(GCCCGACG,-,0.00),228(CGTCGGTC,+,0.00) 436(CGAGTAAA,+,0.00) 134(TACTGGCCCCGC,-,0.00),206(GCGGGGCAAGCG,+,0.00) 13(GCTGCGAGGC,+,0.00),187(GCCGGGAAGC,+,0.00) 561_WT_peak_5501 chr4 74124327 74124513 + 65 NA promoter-TSS (NM_198889) promoter-TSS (NM_198889) 82 NM_032217 26057 Hs.601206 NM_032217 HPRD:10648 ANKRD17 GTAR|NY-BR-16 ankyrin repeat domain 17 protein-coding 0.123656 0.721925 -6(CTCCGCCGCC,-,0.00) -139(TCGCCGCC,+,0.00) -85(CGCGGACG,+,0.00) 5(CCGCCTCG,-,0.00) 561_WT_peak_6632 chr7 30387742 30387946 + 65 NA intron (NM_147128, intron 2 of 4) intron (NM_147128, intron 2 of 4) -21822 NR_002186 222161 Hs.112423 NR_002186 DKFZP586I1420 - uncharacterized protein DKFZp586I1420 pseudo 0.004902 0.385366 -73(CAAAACCA,+,0.00) 561_WT_peak_6117 chr6 18155068 18155284 + 65 NA promoter-TSS (NM_153042) promoter-TSS (NM_153042) 220 NM_000367 7172 Hs.444319 NM_000367 HPRD:01760 TPMT - thiopurine S-methyltransferase protein-coding 0.060185 0.562212 -116(CCGCTTCTGCCC,-,0.00) -140(GTCCGACC,-,0.00) 561_WT_peak_945 chr10 32734692 32735100 + 65 NA promoter-TSS (NM_145023) promoter-TSS (NM_145023) 88 NR_120660 101929431 Hs.639819 NR_120660 LOC101929431 - uncharacterized LOC101929431 ncRNA 0.078431 0.603912 47(GGAGGAGGCCGA,-,0.00) 99(AGCCGCCA,-,0.00) 158(GCGACGCC,+,0.00),177(GGCGTCGT,-,0.00),185(GGCGTCGG,-,0.00) -108(GGACTGGGGCTC,-,0.00) 181(TCGTGGCG,+,0.00) 156(CAGCGACG,-,0.00) 187(CGTCGGGC,+,0.00) -96(TGGTTTTG,-,0.00) 162(CGCCGGCGGCGC,-,0.00),223(CCGGCGCCGGCG,+,0.00) 169(GGCGCCAAGGCG,+,0.00),171(CGCCAAGGCGTC,-,0.00) 561_WT_peak_4018 chr2 32235972 32236160 + 65 NA promoter-TSS (NM_015955) promoter-TSS (NM_015955) -368 NM_001137602 51072 Hs.444969 NM_015955 HPRD:12814 MEMO1 C2orf4|MEMO|NS5ATP7 mediator of cell motility 1 protein-coding 0.085106 0.682540 561_WT_peak_590 chr1 161439949 161440229 + 65 NA Intergenic CpG -35116 NM_021642 2212 Hs.352642 NM_021642 HPRD:00906 FCGR2A CD32|CD32A|CDw32|FCG2|FCGR2|FCGR2A1|FcGR|IGFR2 Fc fragment of IgG, low affinity IIa, receptor (CD32) protein-coding 0.085714 0.718861 -139(TGGGCCGGCAGC,+,0.00) -161(AAGCCTCT,+,0.00) 15(GCGGGAGGGCGG,-,0.00) -97(CGCCCGGC,-,0.00),-76(GCCGCGGG,+,0.00) 60(GTCCGAGG,-,0.00) 63(CGAGGCGG,+,0.00) -121(GGCGCCGTGGGG,+,0.00),-50(GGCCAAGGGGGC,-,0.00) -99(GCCGCCCGGCTG,+,0.00) 561_WT_peak_7607 chrX 119738412 119738618 + 65 NA promoter-TSS (NM_001137554) promoter-TSS (NM_001137554) -37 NM_001137554 28985 Hs.102696 NM_014060 MCTS1 MCT-1|MCT1 malignant T cell amplified sequence 1 protein-coding 0.014563 0.487923 -28(AGCGGCCT,-,0.00) -143(TAGCTGAGAGGG,-,0.00) -41(GTGACAGGAAGC,+,0.00) 561_WT_peak_2878 chr16 68390348 68390674 + 65 NA intron (NM_001290018, intron 17 of 18) intron (NM_001290018, intron 17 of 18) 45494 NM_001290018 54496 Hs.653193 NM_019023 HPRD:15174 PRMT7 - protein arginine methyltransferase 7 protein-coding 0.039877 0.639144 -134(TGGCCCGGCTGC,+,0.00) -23(AGGGCAGGAA,-,0.00),90(AGGCCCGGGC,-,0.00) 103(GCCACGCAGC,-,0.00) -135(GTGGCCCGGCTG,+,0.00),-100(GGGGCTTGGCTG,+,0.00) 561_WT_peak_1607 chr12 12764485 12764939 + 65 NA promoter-TSS (NM_001310) promoter-TSS (NM_001310) -55 NM_001310 1389 Hs.591156 NM_001310 HPRD:07541 CREBL2 - cAMP responsive element binding protein-like 2 protein-coding 0.061674 0.621978 -144(CCGCCTTCAGGG,+,0.00) 230(GGCGGCGA,-,0.00) -95(TCCAGGCCCT,+,0.00) -72(CAAAACCT,+,0.00) 114(GGCAGCCGAAGG,+,0.00) 225(GCGGCGGCGGCG,+,0.00) 231(GCGGCGAAGG,+,0.00) 561_WT_peak_7143-2 chr8 126164420 126164444 + 65 NA intron (NM_173685, intron 4 of 7) intron (NM_173685, intron 4 of 7) 60349 NM_173685 286053 Hs.388297 NM_173685 HPRD:08131 NSMCE2 C8orf36|MMS21|NSE2|ZMIZ7 non-SMC element 2, MMS21 homolog (S. cerevisiae) protein-coding 0.000000 0.280000 561_WT_peak_6227 chr6 27833862 27834125 + 65 NA TTS (NM_003511) TTS (NM_003511) 886 NM_003511 8332 Hs.233568 NM_003511 HPRD:09103 HIST1H2AL H2A.i|H2A/i|H2AFI|dJ193B12.9 histone cluster 1, H2al protein-coding 0.053232 0.541667 -28(CCGGGGAGGCTG,-,0.00) -96(CCGACCGG,+,0.00) 561_WT_peak_3503 chr18 47340479 47340795 + 65 NA promoter-TSS (NM_006111) promoter-TSS (NM_006111) 244 NR_117096 103091864 Hs.646459 NR_117096 SNHG22 SCARNA17HG small nucleolar RNA host gene 22 (non-protein coding) ncRNA 0.066456 0.615142 -141(GCTTTCGGGTCC,-,0.00) 60(AGGCCTCT,+,0.00) -63(CCGCTTGCCCGG,+,0.00) 68(GCCGCGGG,+,0.00) -140(CTTTCGGGTCCC,-,0.00) 108(ACTGCGCA,+,0.00) -71(GGGCGGCGCC,+,0.00) 561_WT_peak_5679 chr5 32444328 32444601 + 65 NA intron (NM_016107, intron 1 of 19) CpG-20616 380 NM_016107 51663 Hs.435231 NM_016107 HPRD:15730 ZFR SPG71|ZFR1 zinc finger RNA binding protein protein-coding 0.106227 0.708029 12(AGGGCAGGGA,-,0.00) -50(GGGCACGA,-,0.00) 72(GCCGCGCC,+,0.00) -140(CGCCGCCGCCGC,-,0.00),-137(CGCCGCCGCCGC,-,0.00) -3(CCGAGACG,-,0.00),91(CCGCCTCG,-,0.00) -33(TCCCATGGCGGG,-,0.00),46(GCAGCCCTGGCG,+,0.00),48(AGCCCTGGCGGG,-,0.00) 561_WT_peak_7143 chr8 126164202 126164236 + 65 NA intron (NM_173685, intron 4 of 7) intron (NM_173685, intron 4 of 7) 60136 NM_173685 286053 Hs.388297 NM_173685 HPRD:08131 NSMCE2 C8orf36|MMS21|NSE2|ZMIZ7 non-SMC element 2, MMS21 homolog (S. cerevisiae) protein-coding 0.029412 0.342857 561_WT_peak_767 chr1 228594048 228594348 + 65 NA exon (NM_145214, exon 1 of 6) exon (NM_145214, exon 1 of 6) 319 NM_145214 81559 Hs.13543 NM_145214 HPRD:07429 TRIM11 BIA1|RNF92 tripartite motif containing 11 protein-coding 0.126667 0.734219 65(GGAGGAAGGCGG,-,0.00) -76(AGCGCCGGATGC,+,0.00) 116(GCGGGGACGCGG,-,0.00) -105(CGCGTACG,+,0.00),-103(CGTACGGG,-,0.00) -133(GCGGGGACAGCT,+,0.00) 84(CGCGGGGCGGCG,+,0.00),115(CGCGGGGACGCG,+,0.00) 43(GCGGCCATGGCG,+,0.00),45(GGCCATGGCGCG,-,0.00) 561_WT_peak_1502 chr11 118306952 118307210 + 65 NA promoter-TSS (NM_005933) promoter-TSS (NM_005933) -124 NM_001197104 4297 Hs.258855 NM_005933 HPRD:01162 KMT2A ALL-1|CXXC7|HRX|HTRX1|MLL|MLL/GAS7|MLL1|MLL1A|TET1-MLL|TRX1|WDSTS lysine (K)-specific methyltransferase 2A protein-coding 0.120155 0.776062 42(CCCCCCTCCGCC,+,0.00) 23(GGTTCCGGGGCC,-,0.00) -8(GGCGGCCGGG,+,0.00) -77(AGGCCGCT,+,0.00) -147(GCGGGCAGGAGG,-,0.00),49(CCGCCTCCCCGC,+,0.00) -57(GGGCTGGCGGGC,-,0.00),-43(GGCCCGGCGCTC,-,0.00) -130(GCCCGGGCCT,+,0.00) -4(GCCGGGCG,+,0.00) 46(CCTCCGCCTCCC,-,0.00) -48(GGCGCGGC,-,0.00) -160(GCGGGGCCGGCG,+,0.00),-60(GCGGGGCTGGCG,+,0.00) -46(CGCGGCCCGGCG,-,0.00) -48(GGCGCGGCCC,-,0.00) -45(GCGGCCCGGCGC,+,0.00),-7(GCGGCCGGGCGG,+,0.00) 561_WT_peak_2788 chr16 30672041 30672323 + 64 NA Intergenic L2c|LINE|L2 -3596 NM_001105079 64319 Hs.247186 NM_022452 HPRD:16354 FBRS FBS|FBS1 fibrosin protein-coding 0.017730 0.505300 -38(AAGCCGCT,+,0.00),-37(AGCCGCTT,-,0.00) 73(CGGGGAAA,+,0.00) 561_WT_peak_3390 chr17 79818990 79819165 + 64 NA promoter-TSS (NM_000918) promoter-TSS (NM_000918) -533 NM_000918 5034 Hs.464336 NM_000918 HPRD:07181 P4HB DSI|ERBA2L|GIT|P4Hbeta|PDI|PDIA1|PHDB|PO4DB|PO4HB|PROHB prolyl 4-hydroxylase, beta polypeptide protein-coding 0.137143 0.727273 -152(GGCGGCCGTG,+,0.00) -84(GTCCGACG,-,0.00) -128(CCGCCTAG,-,0.00) -45(AGGCATGGCGGC,-,0.00) 561_WT_peak_2335 chr14 91882556 91882752 + 64 NA intron (NM_001080414, intron 2 of 29) intron (NM_001080414, intron 2 of 29) 1534 NM_001080414 440193 Hs.525536 NM_001080414 ENSG00000015133 CCDC88C DAPLE|HKRP2|KIAA1509|SCA40 coiled-coil domain containing 88C protein-coding 0.015306 0.451777 -106(GAAAAAGGAAGA,+,0.00) 561_WT_peak_4596 chr20 30310645 30310820 + 64 NA promoter-TSS (NM_001191) promoter-TSS (NM_001191) -76 NM_001191 598 Hs.516966 NM_001191 HPRD:02497 BCL2L1 BCL-XL/S|BCL2L|BCLX|BCLXL|BCLXS|Bcl-X|PPP1R52|bcl-xL|bcl-xS BCL2-like 1 protein-coding 0.068571 0.647727 -27(AGGTGGCT,+,0.00) -138(GGGCGGCCGCTC,-,0.00) -130(GCTCCGCAGC,-,0.00) 561_WT_peak_6977 chr8 37739534 37739727 + 64 NA intron (NM_001002814, intron 1 of 5) intron (NM_001002814, intron 1 of 5) 17385 NM_025151 80223 Hs.191179 NM_025151 HPRD:09787 RAB11FIP1 NOEL1A|RCP|rab11-FIP1 RAB11 family interacting protein 1 (class I) protein-coding 0.041451 0.592784 561_WT_peak_2661 chr16 2732366 2732566 + 64 NA promoter-TSS (NM_018992) promoter-TSS (NM_018992) -29 NM_018992 54442 Hs.61960 NM_018992 HPRD:13768 KCTD5 - potassium channel tetramerization domain containing 5 protein-coding 0.105000 0.671642 -97(GACGCCGGGGCG,-,0.00) -90(GGGCGGGCGCTC,-,0.00) -146(GCGGGCCCAGCC,+,0.00),-93(CCGGGGCGGGCG,+,0.00) 561_WT_peak_1474 chr11 107992663 107992786 + 64 NA intron (NM_000019, intron 1 of 11) CpG 466 NM_000019 38 Hs.232375 NM_000019 HPRD:01946 ACAT1 ACAT|MAT|T2|THIL acetyl-CoA acetyltransferase 1 protein-coding 0.065041 0.620968 -70(CAGCTGCTCCCG,-,0.00) -123(CGCTGGCCCGGC,-,0.00) 561_WT_peak_7251 chr9 35814762 35814941 + 64 NA intron (NM_032593, intron 1 of 4) CpG 191 NM_032593 84681 Hs.70573 NM_032593 HPRD:17106 HINT2 HIT-17 histidine triad nucleotide binding protein 2 protein-coding 0.122905 0.766667 -104(CCTTCGGGACCC,-,0.00) -120(TGCGCGGC,-,0.00),-24(CCCGCGCA,+,0.00) -93(CCCTGGCCCCGG,-,0.00) -118(CGCGGCTCTGCG,-,0.00),-3(CACGGCTCTGCG,-,0.00) -7(CCGCCACG,-,0.00) -8(GCCGCCACGGCT,+,0.00) -78(GCTTCGGAGC,-,0.00) 561_WT_peak_2308 chr14 78108209 78108588 + 64 NA Intergenic CpG -25288 NM_004863 9517 Hs.435661 NM_004863 HPRD:05755 SPTLC2 HSN1C|LCB2|LCB2A|NSAN1C|SPT2|hLCB2a serine palmitoyltransferase, long chain base subunit 2 protein-coding 0.071240 0.634211 -18(AGGGCGGGGA,-,0.00) -36(TCGTGCAG,+,0.00) -137(GGGCGGTGAGGG,-,0.00) -49(TTTCCCCG,-,0.00) -5(TGCGCGGG,-,0.00) -89(CCGGGGTCAGCG,+,0.00) -109(CCGAGAAG,-,0.00) 561_WT_peak_1688 chr12 49658872 49659146 + 64 NA intron (NM_032704, intron 1 of 3) CpG 144 NM_032704 84790 Hs.652390 NM_032704 HPRD:06747 TUBA1C TUBA6|bcm948 tubulin, alpha 1c protein-coding 0.069343 0.658182 -16(GGGCCCGGAAAC,+,0.00) 69(GGCGGCCGGG,+,0.00) 9(TCGGGCCG,+,0.00) -114(CCTTCGCCTCCT,-,0.00) 13(GCCGCGCC,+,0.00) 11(GGGCCGCGCC,+,0.00) 70(GCGGCCGGGCTG,+,0.00) 561_WT_peak_4937 chr22 41488437 41488626 + 64 NA promoter-TSS (NR_031694) promoter-TSS (NR_031694) 14 NR_031694 100302237 NR_031694 miRBase:MI0006428 MIR1281 MIRN1281|hsa-mir-1281 microRNA 1281 ncRNA 0.105820 0.731579 -90(CCCGGGAGGGGG,-,0.00),-89(CCGGGAGGGGGC,-,0.00) -93(AGGCCCGGGA,-,0.00) -26(CCCCCGCC,-,0.00) -125(CGGCAGGA,-,0.00) -150(GCGGCGGCGGCG,+,0.00),-147(GCGGCGGCGGCG,+,0.00) -144(GCGGCGGCGC,+,0.00) 561_WT_peak_7397 chr9 116108122 116108242 + 64 NA Intergenic LTR54|LTR|ERV1 -3630 NM_017688 54836 Hs.614517 NM_017688 HPRD:16566 BSPRY - B-box and SPRY domain containing protein-coding 0.008333 0.429752 561_WT_peak_5578 chr4 110480847 110481188 + 64 NA promoter-TSS (NM_017918) promoter-TSS (NM_017918) -338 NM_017918 55013 Hs.234149 NM_017918 CCDC109B EMRE|MCUb coiled-coil domain containing 109B protein-coding 0.079179 0.643275 -57(CTCGGCCGAC,-,0.00) -90(AGAGGCCT,-,0.00),-63(AGAGGCCT,-,0.00) -22(TCGGTGGG,-,0.00) -157(AGGCCCGGGC,-,0.00) -107(GCACCGCAGC,-,0.00) 561_WT_peak_4531 chr2 242641000 242641176 + 64 NA promoter-TSS (NM_032329) promoter-TSS (NM_032329) -368 NM_032329 84289 Hs.529172 NM_032329 HPRD:16348 ING5 p28ING5 inhibitor of growth family, member 5 protein-coding 0.102273 0.728814 -116(TCGTGGCG,+,0.00) -115(CGTGGCGG,+,0.00) -111(GCGGCCTGTCCG,+,0.00) 561_WT_peak_7348 chr9 94877840 94878156 + 64 NA promoter-TSS (NM_001281303) promoter-TSS (NM_001281303) -242 NM_001281303 10558 Hs.90458 NM_006415 HPRD:05754 SPTLC1 HSAN1|HSN1|LBC1|LCB1|SPT1|SPTI serine palmitoyltransferase, long chain base subunit 1 protein-coding 0.050633 0.492114 43(CCGCCTCCCGGG,+,0.00) 140(TAGAGACG,-,0.00) -12(CGCTTTTG,-,0.00) 40(CCTCCGCCTCCC,-,0.00) 82(CCGAGTAG,-,0.00) 561_WT_peak_149 chr1 31191684 31191965 + 64 NA non-coding (NR_034182, exon 1 of 4) non-coding (NR_034182, exon 1 of 4) 205 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA 0.106762 0.723404 26(AGGCCCGGAGAG,+,0.00) -18(CCGGGCTCCCGG,+,0.00) -123(TCGACGCC,+,0.00) -104(CCCGCGCA,+,0.00) -116(CGCTGGCCCGGG,-,0.00) 60(CAGCCAGGCGGC,-,0.00) 561_WT_peak_6119 chr6 18264982 18265188 + 64 NA promoter-TSS (NM_001134709) promoter-TSS (NM_001134709) -286 NM_001134709 7913 Hs.484813 NM_003472 HPRD:00503 DEK D6S231E DEK proto-oncogene protein-coding 0.131068 0.685990 33(AAGTCGCT,+,0.00) -135(CGGGGCGGGCGG,-,0.00) 34(AGTCGCTA,+,0.00) -125(GGGAGCGGGAGG,+,0.00) -5(GGCGCGGC,-,0.00),4(GGCGCGGT,-,0.00) -136(GCGGGGCGGGCG,+,0.00),-4(GCGCGGCGGGCG,+,0.00) -13(CGCGGAGGGGCG,+,0.00) -113(CGAGGCGG,+,0.00) -106(GCCTGGCAGC,-,0.00) -154(GCGGGCGGGCTG,+,0.00),-109(GCGGCCTGGCAG,+,0.00),-76(GGGGCCTGCGTG,+,0.00) 561_WT_peak_5023 chr3 15352370 15352540 + 64 NA intron (NM_001018009, intron 2 of 8) intron (NM_001018009, intron 2 of 8) 21681 NM_004844 9467 Hs.257761 NM_004844 HPRD:12030 SH3BP5 SAB|SH3BP-5 SH3-domain binding protein 5 (BTK-associated) protein-coding 0.005882 0.491228 561_WT_peak_44 chr1 8877535 8877702 + 64 NA promoter-TSS (NM_001042681) promoter-TSS (NM_001042681) 81 NM_012102 473 Hs.463041 NM_012102 HPRD:05566 RERE ARG|ARP|ATN1L|DNB1 arginine-glutamic acid dipeptide (RE) repeats protein-coding 0.089820 0.660714 -96(GGAGGAGGCGGG,-,0.00) -100(CGGGGGAGGAGG,-,0.00) -72(GCGGGGCGAGCG,+,0.00) -62(CGTCTCGG,+,0.00) -33(GCTCCGGAGC,+,0.00),-33(GCTCCGGAGC,-,0.00) 561_WT_peak_5840 chr5 81267898 81268082 + 64 NA 5' UTR (NM_001131028, exon 1 of 9) 5' UTR (NM_001131028, exon 1 of 9) 146 NM_001131028 83734 Hs.713698 NM_031482 HPRD:16497 ATG10 APG10|APG10L|pp12616 autophagy related 10 protein-coding 0.092391 0.729730 -95(TCGAGGCC,+,0.00) -52(GGCGCGGC,-,0.00) -120(CGCTGGCTCGGC,-,0.00),0(CCCTGGCCCCGT,-,0.00) -40(GCCTCGCAGG,-,0.00) 561_WT_peak_1102 chr10 96059371 96059579 + 64 NA intron (NM_001288989, intron 24 of 32) intron (NM_001288989, intron 24 of 32) -12648 NR_033969 100128054 Hs.677562 NR_033969 ENSG00000268894 PLCE1-AS1 - PLCE1 antisense RNA 1 ncRNA 0.004808 0.473684 561_WT_peak_6043 chr5 179051003 179051482 + 64 NA promoter-TSS (NM_005520) promoter-TSS (NM_005520) -520 NM_005520 3187 Hs.604001 NM_005520 HPRD:03021 HNRNPH1 HNRPH|HNRPH1|hnRNPH heterogeneous nuclear ribonucleoprotein H1 (H) protein-coding 0.087683 0.670833 19(CCGGCCGA,+,0.00),174(CCGGTCGG,-,0.00),267(ACGGTCGG,-,0.00) 119(TCCCAGCCCT,+,0.00) 179(CGGCGCGA,-,0.00),299(TGGCACGA,-,0.00) 158(CGTCGGGC,+,0.00) 14(CCAAACCG,+,0.00) 255(TTGACCCG,-,0.00) -39(GGCGCGGC,-,0.00) 62(GCTGCGGGGC,+,0.00) 561_WT_peak_2555 chr15 75494182 75494395 + 64 NA promoter-TSS (NM_015492) promoter-TSS (NM_015492) 67 NM_015492 56905 Hs.17936 NM_015492 HPRD:13154 C15orf39 - chromosome 15 open reading frame 39 protein-coding 0.145540 0.785047 38(GTCCTGGCGCTC,-,0.00) -104(CGCGAACG,+,0.00),2(CGGACGCG,-,0.00) -41(CCGGTCGG,-,0.00) -161(CCCCCGCC,-,0.00),-26(CCCGCGGC,-,0.00) -107(CGGCGCGA,-,0.00) 24(TAGCGGCG,-,0.00) -39(GGTCGGAC,+,0.00) -53(CCCGCGCA,+,0.00) -161(CCCCCGCCCCGC,-,0.00),-145(AGCCCGCCCCGC,-,0.00),-49(CGCAGGGCCCGG,-,0.00) -111(GCGGCGGCGC,+,0.00) 561_WT_peak_1044 chr10 74094820 74095034 + 64 NA 3' UTR (NM_001002762, exon 8 of 8) 3' UTR (NM_001002762, exon 8 of 8) 19980 NM_001002762 54788 Hs.500013 NM_017626 HPRD:07086 DNAJB12 DJ10 DnaJ (Hsp40) homolog, subfamily B, member 12 protein-coding 0.042056 0.646512 -31(CCCGCGGC,-,0.00) -161(CCTTCTGTTCCC,-,0.00) 561_WT_peak_5324 chr3 171850150 171850342 + 64 NA intron (NM_001135095, intron 2 of 25) AluSx1|SINE|Alu 91902 NM_001135095 64778 Hs.744888 NM_022763 HPRD:10943 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding 0.005208 0.466321 561_WT_peak_5301 chr3 156893166 156893179 + 64 NA Intergenic Intergenic -14690 NM_020307 57018 Hs.4859 NM_020307 CCNL1 ANIA6A|PRO1073|ania-6a cyclin L1 protein-coding 0.076923 0.500000 561_WT_peak_3006 chr17 6555226 6555413 + 64 NA promoter-TSS (NM_016060) promoter-TSS (NM_016060) 260 NM_001105520 388327 Hs.262480 NM_001105520 C17orf100 - chromosome 17 open reading frame 100 protein-coding 0.112299 0.734043 15(AAGCGGCT,+,0.00) -48(TCGTCCCG,+,0.00) -22(GCGCCGCAGC,-,0.00) 561_WT_peak_6944 chr8 22497201 22497322 + 64 NA TTS (NR_027715) TTS (NR_027715) 2461 NR_027715 80094 Hs.675917 NM_025026 BIN3-IT1 - BIN3 intronic transcript 1 (non-protein coding) ncRNA 0.000000 0.557377 561_WT_peak_2554 chr15 75359495 75359679 + 64 NA Intergenic HERVP71A-int|LTR|ERV1 23977 NM_001301105 60490 Hs.458922 NM_021823 HPRD:14377 PPCDC PPC-DC|coaC phosphopantothenoylcysteine decarboxylase protein-coding 0.000000 0.437838 -119(CCCTGTCATCCC,+,0.00) 7(GCTGGGAAGG,+,0.00) 561_WT_peak_2965 chr17 900352 900530 + 64 NA promoter-TSS (NM_013337) promoter-TSS (NM_013337) 84 NM_013337 29928 Hs.745034 NM_013337 TIMM22 TEX4|TIM22 translocase of inner mitochondrial membrane 22 homolog (yeast) protein-coding 0.084270 0.709497 -28(AAGCGTCAGCCC,+,0.00) -106(GGCTCGGCCC,-,0.00) -137(TGTCATGGCGGC,-,0.00) -73(GCTCCGCTGC,-,0.00) 561_WT_peak_3459 chr18 20513837 20514008 + 64 NA promoter-TSS (NM_203292) promoter-TSS (NM_203292) 83 NM_203291 5932 Hs.546282 NM_002894 HPRD:04990 RBBP8 COM1|CTIP|JWDS|RIM|SAE2|SCKL2 retinoblastoma binding protein 8 protein-coding 0.064327 0.610465 -162(CGCACGCG,-,0.00) -3(CTTACCCG,-,0.00) -94(GCCCCGCTGC,-,0.00) -116(GGGACCTGGCTG,+,0.00) 561_WT_peak_79 chr1 16971048 16971370 + 64 NA promoter-TSS (NR_027504) promoter-TSS (NR_027504) -860 NR_027504 11209 Hs.349110 NR_027504 ENSG00000186301 MST1P2 MSPL-1|MSPL-2|MSPL-3|MSPL1|MSPL2|MSPL3|MSTP1|MSTP2|MSTP3 macrophage stimulating 1 (hepatocyte growth factor-like) pseudogene 2 pseudo 0.118012 0.715170 -64(CTCGGCCGCC,-,0.00) 8(CGCGCACG,+,0.00),37(CGCGCACG,+,0.00),39(CGCACGCG,-,0.00) 35(GCCGCGCA,+,0.00) -128(CCGCGAAG,-,0.00) 561_WT_peak_3722 chr19 34895159 34895394 + 64 NA promoter-TSS (NM_032346) promoter-TSS (NM_032346) -27 NM_032346 84306 Hs.515344 NM_032346 HPRD:17480 PDCD2L - programmed cell death 2-like protein-coding 0.123404 0.661017 -117(CGCACGCG,-,0.00),-42(CGCGTGCG,+,0.00) 1(CGCCCGGC,-,0.00) 7(GCGGCCATGGCG,+,0.00),9(GGCCATGGCGGC,-,0.00) -34(CAGAGAGGCCGC,-,0.00) 561_WT_peak_3770 chr19 41283177 41283367 + 63 NA promoter-TSS (NR_037791) promoter-TSS (NR_037791) -852 NM_016154 53916 Hs.631539 NM_016154 HPRD:11473 RAB4B - RAB4B, member RAS oncogene family protein-coding 0.015789 0.518325 -4(CGCTGGCCCTGC,-,0.00) 561_WT_peak_2545 chr15 72754628 72754845 + 63 NA Intergenic AluSz6|SINE|Alu -11931 NM_005744 25820 Hs.268787 NM_005744 HPRD:05730 ARIH1 ARI|HARI|HHARI|UBCH7BP ariadne RBR E3 ubiquitin protein ligase 1 protein-coding 0.027650 0.500000 -53(GCCTCGGCTCCC,-,0.00) 561_WT_peak_7452 chr9 132220544 132220733 + 63 NA Intergenic Intergenic -30301 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 - long intergenic non-protein coding RNA 963 ncRNA 0.015873 0.505263 561_WT_peak_7139-2 chr8 125551092 125551111 + 63 NA promoter-TSS (NM_005005) promoter-TSS (NM_005005) 228 NM_001146160 83940 Hs.170568 NM_032026 HPRD:11621 TATDN1 - TatD DNase domain containing 1 protein-coding 0.000000 0.400000 561_WT_peak_4544 chr20 2633374 2633737 + 63 NA TTS (NR_031699) TTS (NR_031699) 132 NR_031699 100302138 NR_031699 MIR1292 MIRN1292|hsa-mir-1292 microRNA 1292 ncRNA 0.099174 0.697802 123(GCCGGCCGAG,+,0.00) -8(CTGCTGGCGCTG,-,0.00) -23(GCGGTCGG,-,0.00),124(CCGGCCGA,+,0.00) 141(GGCGGGGG,+,0.00) 561_WT_peak_1953 chr13 24463572 24463707 + 63 NA promoter-TSS (NM_001135816) promoter-TSS (NM_001135816) 47 NM_001135816 542767 Hs.642624 NM_001014442 C1QTNF9B-AS1 PCOTH C1QTNF9B antisense RNA 1 protein-coding 0.103704 0.676471 -160(GCTTCCGGGTCT,-,0.00) -82(CTCGGCCGCC,-,0.00) -89(TCGCCTTCTCGG,+,0.00),-77(CCGCCCTCCCGG,+,0.00) -101(CGTCGCTC,+,0.00) -147(GGCGCGGC,-,0.00) -85(CTTCTCGG,+,0.00) 561_WT_peak_6738 chr7 77325775 77326037 + 63 NA non-coding (NR_038361, exon 1 of 3) non-coding (NR_038361, exon 1 of 3) 163 NM_198467 222194 Hs.72451 NM_198467 RSBN1L - round spermatid basic protein 1-like protein-coding 0.095420 0.676806 -142(CGCCGAGCCCCG,+,0.00) -96(CGTCTCGG,+,0.00),-31(CCGCCAAG,-,0.00) 561_WT_peak_3601 chr19 7616269 7616489 + 63 NA intron (NM_001166114, intron 18 of 31) intron (NM_001166114, intron 18 of 31) 15790 NM_001166114 10908 Hs.631863 NM_006702 HPRD:04432 PNPLA6 BNHS|NTE|NTEMND|SPG39|iPLA2delta|sws patatin-like phospholipase domain containing 6 protein-coding 0.036364 0.574661 -67(GGCGTCCA,-,0.00) 5(TCGTGCCC,+,0.00) -71(GTCCGGCG,-,0.00) -6(CCGCGAAG,-,0.00) 561_WT_peak_552 chr1 155830083 155830463 + 63 NA intron (NM_152280, intron 1 of 3) CpG 1013 NM_152280 23208 Hs.32984 NM_152280 HPRD:12289 SYT11 SYT12|sytXI synaptotagmin XI protein-coding 0.063158 0.635171 59(CCTTCCGGGGCC,-,0.00) 87(CTGGGCCGCC,-,0.00) 187(AGGCCGCT,+,0.00) 181(CGGGGGAGGCCG,-,0.00) 170(GAGGCCCAGCCC,+,0.00) 131(GGCGGGGG,+,0.00) -129(CAAAAAGGAAGC,+,0.00),74(GTTCCCTGTTTC,-,0.00) 89(GGGCCGCCTT,+,0.00),167(AAAGAGGCCC,-,0.00),187(AGGCCGCTTT,+,0.00) 561_WT_peak_4903 chr22 37518060 37518239 + 63 NA Intergenic Intergenic -12546 NM_001289000 164656 Hs.370885 NM_153609 HPRD:10270 TMPRSS6 IRIDA transmembrane protease, serine 6 protein-coding 0.016760 0.561111 561_WT_peak_3571 chr19 2478793 2478996 + 63 NA TTS (NM_015675) TTS (NM_015675) 2771 NM_015675 4616 Hs.110571 NM_015675 HPRD:05382 GADD45B GADD45BETA|MYD118 growth arrest and DNA-damage-inducible, beta protein-coding 0.054187 0.544118 -89(GCCTCCGGGCCA,-,0.00) -20(AGCCACCT,-,0.00) 9(GGCGCGGT,-,0.00) 561_WT_peak_7161 chr8 134029418 134029645 + 63 NA intron (NM_003235, intron 37 of 47) MER46C|DNA|TcMar-Tigger 29295 NR_107002 102466865 NR_107002 MIR7848 hsa-mir-7848 microRNA 7848 ncRNA 0.000000 0.403509 561_WT_peak_4395 chr2 191272457 191272633 + 63 NA promoter-TSS (NM_017694) promoter-TSS (NM_017694) -536 NM_017694 54842 Hs.418581 NM_017694 HPRD:13369 MFSD6 MMR2|hMMR2 major facilitator superfamily domain containing 6 protein-coding 0.056818 0.553672 -96(CCTCCCTCCCGG,+,0.00) -87(CGGGTCAA,+,0.00) 561_WT_peak_1859 chr12 111843877 111844091 + 63 NA 5' UTR (NM_005475, exon 1 of 8) 5' UTR (NM_005475, exon 1 of 8) 232 NM_005475 10019 Hs.506784 NM_005475 HPRD:05480 SH2B3 IDDM20|LNK SH2B adaptor protein 3 protein-coding 0.135514 0.767442 -36(CCGCCCCCTCGG,+,0.00),-12(CCGGGGGCGCGC,-,0.00) -2(GCGACGCC,+,0.00) -49(GGCGGGGG,+,0.00) 15(CCGGGCCCAGAG,+,0.00) -55(GCCCAGGGCGGG,-,0.00),0(GACGCCATGGGC,+,0.00) 561_WT_peak_809 chr1 235656192 235656551 + 63 NA intron (NM_001277155, intron 3 of 7) L2a|LINE|L2 11410 NM_001277155 148789 Hs.498143 NM_152490 HPRD:16533 B3GALNT2 B3GalNAc-T2|MDDGA11 beta-1,3-N-acetylgalactosaminyltransferase 2 protein-coding 0.000000 0.436111 561_WT_peak_5762-2 chr5 56206033 56206144 + 63 NA intron (NM_001171990, intron 1 of 5) CpG 1001 NM_153706 133383 Hs.85950 NM_153706 HPRD:14572 SETD9 C5orf35 SET domain containing 9 protein-coding 0.018018 0.428571 561_WT_peak_739 chr1 223403646 223403975 + 63 NA intron (NM_017982, intron 5 of 8) intron (NM_017982, intron 5 of 8) -87186 NM_003268 7100 Hs.604542 NM_003268 HPRD:04326 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll-like receptor 5 protein-coding 0.012158 0.506061 561_WT_peak_5950 chr5 138897503 138897939 + 63 NA Intergenic CpG -35378 NM_198282 340061 Hs.379754 NM_198282 TMEM173 ERIS|MITA|MPYS|NET23|SAVI|STING transmembrane protein 173 protein-coding 0.091743 0.702517 181(TCCACGCC,+,0.00) 122(TCGGGCGG,-,0.00) 139(CCTCGGAC,+,0.00) -66(CGGGTGAA,+,0.00),189(TTTGCCCG,-,0.00) 103(CGTGCGGCTCCC,-,0.00) 42(GCCGCGCC,+,0.00) -51(GCGGCGGCGC,+,0.00) -101(AGGCCAGGCCGC,-,0.00),40(CAGCCGCGCCGC,-,0.00) 561_WT_peak_5865 chr5 102594802 102595072 + 63 NA intron (NM_033211, intron 1 of 2) CpG 495 NM_033211 90355 Hs.482976 NM_033211 HPRD:12383 C5orf30 - chromosome 5 open reading frame 30 protein-coding 0.125926 0.756458 -81(CTGGTAAA,+,0.00) -103(GGCACCCGAAGG,+,0.00) -154(TGGGCGGC,-,0.00) -143(GCGGCCCCAGCG,+,0.00),-69(GTGGGGCCCGCG,+,0.00) -151(GCGGCGGGGC,+,0.00) 561_WT_peak_1901 chr12 122326410 122326617 + 63 NA promoter-TSS (NM_001261400) promoter-TSS (NM_001261400) 4 NM_001171993 3242 Hs.2899 NM_002150 HPRD:02041 HPD 4-HPPD|4HPPD|GLOD3|HPPDASE|PPD 4-hydroxyphenylpyruvate dioxygenase protein-coding 0.072464 0.591346 -122(CTGCACGA,-,0.00),-31(TCCTGCCG,+,0.00) -40(CGACGCTA,+,0.00) -43(TTCCGACG,-,0.00) 6(GGCGCGGC,-,0.00) 26(AGCTCCGCCC,-,0.00) 561_WT_peak_2485 chr15 52311278 52311561 + 63 NA promoter-TSS (NM_002748) promoter-TSS (NM_002748) 8 NM_002748 5597 Hs.411847 NM_002748 HPRD:04213 MAPK6 ERK3|HsT17250|PRKM6|p97MAPK mitogen-activated protein kinase 6 protein-coding 0.134276 0.732394 8(GGCGGCGA,-,0.00) -120(CGCGTGCG,+,0.00) -98(GGCGGGGG,+,0.00) 9(GCGGCGACTGCG,+,0.00),93(CGCGAGCCCCGC,-,0.00) -52(CGTGGCACCGCG,-,0.00),-44(CGCGAAGCCCCG,+,0.00) -39(AGCCCCGCCC,-,0.00) -45(CCGCGAAG,-,0.00) -104(GGGCAGGGCGGG,-,0.00) 18(GCGGCAAAGC,+,0.00) 561_WT_peak_6778 chr7 100027652 100027842 + 63 NA exon (NM_019606, exon 1 of 4) exon (NM_019606, exon 1 of 4) 493 NM_019606 56257 Hs.178011 NM_019606 HPRD:07889 MEPCE BCDIN3 methylphosphate capping enzyme protein-coding 0.147368 0.764398 -163(GGCGGCGGAG,+,0.00) -149(AGCCGTTT,-,0.00) -105(TCGGGCGG,-,0.00),15(GCGGTCGG,-,0.00),19(TCGGTCGG,-,0.00) -140(TGGTGCCG,+,0.00) -103(GGGCGGAGGGGG,-,0.00) -137(TGCCGGCCCCGC,-,0.00),-128(CGCCGCCGCCGC,-,0.00) -132(GCCCCGCCGC,-,0.00),-49(GCTCCGCGGC,-,0.00) 561_WT_peak_3544 chr19 488962 489140 + 63 NA Intergenic CpG -7439 NM_130760 8174 Hs.102598 NM_130760 HPRD:00035 MADCAM1 MACAM1 mucosal vascular addressin cell adhesion molecule 1 protein-coding 0.140449 0.782123 -140(CGCCACGA,-,0.00) -99(AGCGCGCA,+,0.00) -25(GCGGGGGCCGCG,+,0.00) -113(AGAGCGGCCC,-,0.00) -141(CCGCCACG,-,0.00) -52(CGGCATGGCGGG,-,0.00) -58(GCTCCGCGGC,-,0.00),-28(GCTGCGGGGG,+,0.00) 561_WT_peak_1800 chr12 93772209 93772503 + 63 NA promoter-TSS (NR_040096) promoter-TSS (NR_040096) 30 NM_001301023 11163 Hs.506325 NM_019094 HPRD:14850 NUDT4 DIPP2|DIPP2alpha|DIPP2beta nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding 0.068027 0.674576 94(CGCGTAAG,+,0.00) -65(CCCCTTCCTCCC,-,0.00) -83(GGGCTGGGAGGG,-,0.00) 90(GGGCCGCGTA,+,0.00) -89(GCTGCGGGGC,+,0.00) 561_WT_peak_2949 chr16 89252799 89252991 + 63 NA intron (NM_004933, intron 5 of 13) L2b|LINE|L2 13634 NM_001242757 146429 Hs.447544 NM_001242757 SLC22A31 - solute carrier family 22, member 31 protein-coding 0.046875 0.569948 -53(AAACGCTT,-,0.00),-20(AAACGCTT,-,0.00) 561_WT_peak_7175 chr8 144108114 144108289 + 63 NA Intergenic Intergenic 8299 NM_002346 4061 Hs.521903 NM_002346 HPRD:03227 LY6E RIG-E|RIGE|SCA-2|SCA2|TSA-1 lymphocyte antigen 6 complex, locus E protein-coding 0.017143 0.659091 -38(CAGGGGAGGAGG,-,0.00) -5(CACAACCG,+,0.00) 561_WT_peak_292 chr1 76190355 76190533 + 63 NA 5' UTR (NM_000016, exon 1 of 12) 5' UTR (NM_000016, exon 1 of 12) 412 NM_001286042 34 Hs.445040 NM_000016 HPRD:08447 ACADM ACAD1|MCAD|MCADH acyl-CoA dehydrogenase, C-4 to C-12 straight chain protein-coding 0.095506 0.692737 -115(CGCGTTCG,+,0.00) -19(AGGGTGAGAGGG,-,0.00) -133(GCGGGACCAGAG,+,0.00) 561_WT_peak_5379 chr3 197687160 197687433 + 63 NA promoter-TSS (NM_032263) promoter-TSS (NM_032263) 225 NM_033029 89782 Hs.518540 NM_033029 HPRD:07023 LMLN GP63|INV|IX14|MSP leishmanolysin-like (metallopeptidase M8 family) protein-coding 0.065934 0.653285 -161(CGGGCCGGAGCC,+,0.00),-95(GGCTCCGGGCCA,-,0.00) -118(AAGCGTTT,+,0.00) -48(CCTCCCTGCCGG,+,0.00) -39(CGGCACCA,-,0.00) -123(GTCCGAAG,-,0.00) 20(AGGGTAAA,+,0.00) -92(TCCGGGCCAGCG,+,0.00) -8(GGCGACATGGGC,+,0.00) 561_WT_peak_7163 chr8 134511376 134511535 + 63 NA intron (NM_173344, intron 2 of 9) MIRb|SINE|MIR 72728 NM_173344 6482 Hs.374257 NM_003033 HPRD:06219 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding 0.018868 0.462500 561_WT_peak_7247 chr9 34637272 34637462 + 63 NA exon (NM_147157, exon 2 of 3) exon (NM_147157, exon 2 of 3) 456 NR_104108 10280 Hs.522087 NM_005866 HPRD:03580 SIGMAR1 ALS16|OPRS1|SIG-1R|SR-BP|SR-BP1|SRBP|hSigmaR1|sigma1R sigma non-opioid intracellular receptor 1 protein-coding 0.089474 0.701571 -2(GGCGGCGGAG,+,0.00) 11(GGGCTGGCACCG,-,0.00) -96(CGTCGGGC,+,0.00) 2(GCGGAGTCAGGG,+,0.00) -64(CGCAGCTCCACG,-,0.00) -149(GCACATGGCGCC,-,0.00) -83(GTGGCCTGGGTG,+,0.00) 561_WT_peak_2680 chr16 4304073 4304269 + 63 NA promoter-TSS (NR_039999) promoter-TSS (NR_039999) -381 NR_039999 100507501 Hs.632979 NR_039999 ENSG00000262468 LOC100507501 - uncharacterized LOC100507501 ncRNA 0.081633 0.629442 -58(CGTCGGGC,+,0.00) 561_WT_peak_1660 chr12 46064269 46064472 + 63 NA Intergenic Intergenic 57334 NR_028408 400027 Hs.597122 NR_028408 ENSG00000273015 LINC00938 - long intergenic non-protein coding RNA 938 ncRNA 0.000000 0.411765 -72(AACCACTT,-,0.00) 561_WT_peak_3392 chr17 79935412 79935662 + 63 NA exon (NM_024083, exon 1 of 16) exon (NM_024083, exon 1 of 16) 111 NM_001251888 79058 Hs.298351 NM_024083 HPRD:06947 ASPSCR1 ASPCR1|ASPL|ASPS|RCC17|TUG|UBXD9|UBXN9 alveolar soft part sarcoma chromosome region, candidate 1 protein-coding 0.156000 0.760956 -164(GGACCCGGAAGT,+,0.00),-88(GACGCCGGCCCG,-,0.00),-83(CGGCCCGGCGGC,+,0.00) -38(GGCGGCGGAG,+,0.00) -45(CCCGGCAGGCGG,-,0.00),55(CCGCCCGCCCGG,+,0.00) -90(TTGACGCC,+,0.00) -86(CGCCGGCCCGGC,-,0.00),-85(GCCGGCCCGGCG,+,0.00),-13(TGCTGGCCCCGA,-,0.00) -127(CGTGGCTGCGCG,-,0.00),-32(GGAGGCTCCGCG,-,0.00) -131(GCCGCGTGGCTG,+,0.00),-118(GCGTCCTGGCTG,+,0.00),-84(CCGGCCCGGCGG,+,0.00) 561_WT_peak_4907 chr22 37881102 37881423 + 63 NA intron (NM_002405, intron 1 of 7) intron (NM_002405, intron 1 of 7) 1163 NM_001166343 4242 Hs.517603 NM_002405 HPRD:03988 MFNG - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding 0.056075 0.642857 24(CTCAGCCGCC,-,0.00) 27(AGCCGCCA,-,0.00) -142(GGGCTGGAAGGG,-,0.00) 101(AGACATGGCGGC,-,0.00) -11(CAGGCAGGCCTC,-,0.00) 561_WT_peak_177 chr1 36184544 36184966 + 63 NA promoter-TSS (NM_152374) promoter-TSS (NM_152374) 35 NM_152374 127703 Hs.112023 NM_152374 HPRD:08798 C1orf216 - chromosome 1 open reading frame 216 protein-coding 0.080569 0.624113 -145(AACCGCTT,-,0.00) 61(GCCGCGGG,+,0.00) 162(CGGCTTTG,-,0.00) 85(CCTTCGTCTGCC,-,0.00) -129(CGCGGGGCCGCG,+,0.00),-129(CGCGGGGCCGCG,-,0.00) -125(GGGCCGCGTT,+,0.00) 154(CCGCCACG,-,0.00),234(CTTCTCGG,+,0.00) -141(GCTTCGCCCC,-,0.00),-50(GCCTCGCTGC,-,0.00),61(GCCGCGGGGC,+,0.00) 561_WT_peak_4315 chr2 136633392 136633591 + 63 NA intron (NM_005915, intron 1 of 16) CpG 556 NM_005915 4175 Hs.444118 NM_005915 HPRD:03485 MCM6 MCG40308|Mis5|P105MCM minichromosome maintenance complex component 6 protein-coding 0.080402 0.645000 -148(GCTGCGTGGC,+,0.00) 561_WT_peak_5994 chr5 156347516 156347694 + 63 NA intron (NM_138379, intron 7 of 8) intron (NM_138379, intron 7 of 8) 42661 NM_138379 91937 Hs.334907 NM_138379 HPRD:15508 TIMD4 SMUCKLER|TIM4 T-cell immunoglobulin and mucin domain containing 4 protein-coding 0.011236 0.508380 -132(GCTGCGGTGC,+,0.00) 561_WT_peak_5923 chr5 133984078 133984540 + 63 NA promoter-TSS (NM_001252231) promoter-TSS (NM_001252231) -166 NM_001252231 10802 Hs.595540 NM_021982 ENSG00000113615 SEC24A - SEC24 family member A protein-coding 0.106061 0.660907 -67(AAGCGGCT,+,0.00),-66(AGCGGCTA,-,0.00) 60(GGCGGCGA,-,0.00) 291(CGTTCGCG,-,0.00) 285(GCCGGGCG,+,0.00) -106(CAAAACCC,+,0.00) 151(GGCGCGGC,-,0.00),210(TGCGCGGC,-,0.00) 147(CGCCGGCGCGGC,-,0.00),211(GCGCGGCCGGCG,+,0.00) 204(TGCGGCTGCGCG,-,0.00) 57(CGTGGCGG,+,0.00) 237(CCGGCCAGGGCC,+,0.00) 61(GCGGCGAGGC,+,0.00),166(GCTGCGAGCC,+,0.00),208(GCTGCGCGGC,+,0.00) 122(GCAGCCCGGCTG,+,0.00) 561_WT_peak_5909 chr5 131892514 131892805 + 63 NA promoter-TSS (NM_005732) promoter-TSS (NM_005732) 43 NM_005732 10111 Hs.633509 NM_005732 HPRD:04950 RAD50 NBSLD|RAD502|hRad50 RAD50 homolog (S. cerevisiae) protein-coding 0.116838 0.722603 4(GGCGGCCGAG,+,0.00) -101(CCCGGAAGTCGG,-,0.00) -38(GGCGTGGA,-,0.00) -30(CGCGTGCG,+,0.00) 58(CGGCTTTG,-,0.00) 118(CGGGGAAA,+,0.00) 11(GAGGCAGGAAGC,+,0.00) -88(GCTGCGCA,+,0.00),29(TGCGCGGT,-,0.00) 561_WT_peak_620 chr1 172608308 172608486 + 63 NA Intergenic Intergenic -19788 NM_000639 356 Hs.2007 NM_000639 HPRD:00610 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6 Fas ligand (TNF superfamily, member 6) protein-coding 0.011236 0.458101 561_WT_peak_6071 chr6 392979 393261 + 63 NA non-coding (NR_046000, exon 2 of 10) non-coding (NR_046000, exon 2 of 10) 1381 NM_002460 3662 Hs.401013 NM_002460 HPRD:03543 IRF4 LSIRF|MUM1|NF-EM5 interferon regulatory factor 4 protein-coding 0.131206 0.724382 -140(GACTCCGGGGCC,-,0.00) 25(GGCGGCCGAG,+,0.00) -9(CGCGGACG,+,0.00) -3(CGGCACGC,-,0.00),45(CGGCATGA,-,0.00) 68(GCAACGGGAAGC,+,0.00) 31(CGAGGCGG,+,0.00) -156(GCTTCGCAGC,-,0.00) 561_WT_peak_6114 chr6 16713117 16713130 + 63 NA intron (NM_001128164, intron 2 of 7) intron (NM_001128164, intron 2 of 7) 48598 NM_001128164 6310 Hs.434961 NM_000332 HPRD:03333 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding 0.000000 0.357143 561_WT_peak_5732 chr5 43557066 43557263 + 63 NA promoter-TSS (NM_182789) promoter-TSS (NM_182789) 31 NM_182789 10605 Hs.482038 NM_006451 HPRD:05539 PAIP1 - poly(A) binding protein interacting protein 1 protein-coding 0.131980 0.787879 -164(GGAGGAGGGCGG,-,0.00) 21(CGGCCCGGAGGC,+,0.00) -34(CCGGCTCCCCGC,+,0.00) -85(GAGCGCCCGCCC,+,0.00) -40(CAAAACCC,+,0.00) -18(GGCGCGGC,-,0.00) -154(GGCGGGCCCCGG,-,0.00),-82(CGCCCGCCCCGC,-,0.00) -35(CCCGGCTCCCCG,-,0.00) 7(ACAGCGGCCC,-,0.00) -146(CCGGCTCGGCTG,+,0.00) 561_WT_peak_5762 chr5 56205888 56205892 + 63 NA intron (NM_001171990, intron 1 of 5) CpG 803 NM_153706 133383 Hs.85950 NM_153706 HPRD:14572 SETD9 C5orf35 SET domain containing 9 protein-coding 0.250000 0.800000 561_WT_peak_6997 chr8 42034831 42035119 + 63 NA intron (NM_000930, intron 13 of 13) intron (NM_000930, intron 13 of 13) 24511 NM_006803 10947 Hs.654529 NM_006803 HPRD:09801 AP3M2 AP47B|CLA20|P47B adaptor-related protein complex 3, mu 2 subunit protein-coding 0.003472 0.401384 -39(CTGGTAAA,+,0.00) 561_WT_peak_4658 chr20 46118191 46118438 + 63 NA Intergenic AluJr|SINE|Alu -12287 NM_001174087 8202 Hs.592142 NM_006534 HPRD:03570 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding 0.016194 0.471774 3(GGGAGGCCAAGG,+,0.00) 7(GGCCAAGGCGGA,-,0.00) 561_WT_peak_3237 chr17 47419644 47419795 + 63 NA intron (NM_014897, intron 1 of 5) intron (NM_014897, intron 1 of 5) -18808 NR_110884 102724596 Hs.559253 NR_110882 LOC102724596 - uncharacterized LOC102724596 ncRNA 0.000000 0.282895 561_WT_peak_2113 chr14 21077424 21077640 + 63 NA Intergenic tRNA-Pro-CCY|tRNA|tRNA -18550 NM_001024822 493901 Hs.729466 NM_001024822 HPRD:18667 RNASE12 HEL-S-85p|RAI1 ribonuclease, RNase A family, 12 (non-active) protein-coding 0.037037 0.474654 -25(AGCCACCT,-,0.00) -10(TCGGTTGG,-,0.00) 561_WT_peak_2937 chr16 87425447 87425656 + 63 NA promoter-TSS (NM_022818) promoter-TSS (NM_022818) 162 NM_001282683 79791 Hs.567582 NM_024735 FBXO31 FBX14|FBXO14|Fbx31|pp2386 F-box protein 31 protein-coding 0.071770 0.714286 -115(AAGTCTCT,+,0.00) -19(CAGCCTCCCCCG,+,0.00),17(CCGGGCAGCAGG,-,0.00) 13(AGGGCCGGGC,-,0.00) -13(CCCCCGCC,-,0.00) -88(CGGATTTG,-,0.00) -13(CCCCCGCCCCGC,-,0.00) -134(CGTCTCGG,+,0.00) 561_WT_peak_7535 chrX 47420601 47420787 + 63 NA intron (NM_001256196, intron 1 of 15) CpG 195 NM_001256196 369 Hs.446641 NM_001654 HPRD:02405 ARAF A-RAF|ARAF1|PKS2|RAFA1 A-Raf proto-oncogene, serine/threonine kinase protein-coding 0.096774 0.705882 -53(CGGACCGAAAGC,+,0.00),-3(CTGCCCGGAACC,+,0.00) -102(CCGGGAGGGCTC,-,0.00) -53(CGGACCGA,+,0.00) -66(CGGGCAGGGA,-,0.00),-6(TCCCTGCCCG,+,0.00) -128(TAGCGGCG,-,0.00) 561_WT_peak_641 chr1 181002337 181002528 + 63 NA promoter-TSS (NM_001531) promoter-TSS (NM_001531) -129 NM_001195035 3140 Hs.13500 NM_001531 HPRD:09012 MR1 HLALS major histocompatibility complex, class I-related protein-coding 0.000000 0.541667 -88(ACTTCCTCTTTC,-,0.00) 561_WT_peak_7139 chr8 125550818 125550942 + 63 NA promoter-TSS (NM_005005) promoter-TSS (NM_005005) 449 NM_001146160 83940 Hs.170568 NM_032026 HPRD:11621 TATDN1 - TatD DNase domain containing 1 protein-coding 0.048387 0.584000 -60(AGGGCCGGGA,-,0.00) -78(CCGCCAAG,-,0.00) 561_WT_peak_4672 chr20 48293515 48293739 + 63 NA intron (NM_004776, intron 1 of 8) intron (NM_004776, intron 1 of 8) 36794 NM_004776 9334 Hs.370487 NM_004776 HPRD:06807 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 protein-coding 0.008929 0.426667 8(GGGCTGGAAGGG,-,0.00) 561_WT_peak_3980 chr2 21022490 21022759 + 63 NA intron (NM_001282723, intron 1 of 5) CpG 266 NM_001282723 60526 Hs.187823 NM_021925 HPRD:07113 C2orf43 - chromosome 2 open reading frame 43 protein-coding 0.063197 0.614815 -38(AAGTGGCT,+,0.00) 561_WT_peak_4367 chr2 172864846 172865084 + 63 NA intron (NM_199227, intron 1 of 9) CpG 161 NM_199227 254042 Hs.298250 NM_199227 METAP1D MAP 1D|MAP1D|MetAP 1D|Metap1l methionyl aminopeptidase type 1D (mitochondrial) protein-coding 0.109244 0.631799 -144(CCGACGCC,+,0.00),-118(GGCGTCCA,-,0.00) -146(GACCGACG,-,0.00) -2(CTTCTCGG,+,0.00) -137(CAACATGGCGGC,-,0.00) 561_WT_peak_6060 chr5 180634663 180634945 + 63 NA Intergenic tRNA-Lys-AAG|tRNA|tRNA -2511 NM_203293 81786 Hs.487412 NM_033342 HPRD:11648 TRIM7 GNIP|RNF90 tripartite motif containing 7 protein-coding 0.046099 0.448763 -61(TCAGTCGG,-,0.00) -73(CGCCCGGC,-,0.00) -141(CAAACCCG,+,0.00) -5(TGGGCGGC,-,0.00) 561_WT_peak_568 chr1 158978725 158978932 + 63 NA promoter-TSS (NM_005531) promoter-TSS (NM_005531) -854 NM_005531 3428 Hs.380250 NM_005531 HPRD:00969 IFI16 IFNGIP1|PYHIN2 interferon, gamma-inducible protein 16 protein-coding 0.014493 0.461538 561_WT_peak_3060 chr17 18161758 18161994 + 63 NA promoter-TSS (NM_001256264) promoter-TSS (NM_001256264) -6 NM_001256264 2314 Hs.513984 NM_002018 HPRD:02647 FLII FLI|FLIL|Fli1 flightless I homolog (Drosophila) protein-coding 0.101695 0.742616 42(TCCACGCC,+,0.00) -117(GAGCCCCACCCC,+,0.00) -78(AGGGCCTGGA,-,0.00),-39(CGGGCCGGGC,-,0.00),4(GCCCGGCCCG,+,0.00) -36(GCCGGGCG,+,0.00),3(CGCCCGGC,-,0.00) -4(CGGCACGC,-,0.00) -61(GGGACAGGAAGC,+,0.00) -40(GCGGGCCGGGCG,+,0.00) 6(CCGGCCCGGCTC,+,0.00) 561_WT_peak_7465 chr9 134270155 134270352 + 63 NA Intergenic Intergenic -35224 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline-rich coiled-coil 2B protein-coding 0.081218 0.611111 -117(TGGCGGCT,+,0.00) -96(GAGCGGCCGCCC,+,0.00) -129(CGGCGCTA,+,0.00) -91(GCCGCCCA,+,0.00) -137(GGCCCCGGCGGC,-,0.00) 11(GGGGCCTGCCAG,+,0.00) 561_WT_peak_674 chr1 200638776 200639073 + 63 NA 5' UTR (NM_001031725, exon 1 of 8) 5' UTR (NM_001031725, exon 1 of 8) 202 NM_001031725 83479 Hs.497332 NM_031306 HPRD:10893 DDX59 OFD5|ZNHIT5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 protein-coding 0.104377 0.728188 -64(GCTTCCGGGGCA,-,0.00) -28(CGCGTCCG,+,0.00) 31(CCGCCCGA,+,0.00) -7(TCGGGCCG,+,0.00) -147(GCCGCGCA,+,0.00),-46(CCCGCGCA,+,0.00) 35(CCGACAAG,-,0.00) -125(GCCGCCGCGGCC,+,0.00),-87(CACCAGGGCGGC,-,0.00),-80(GCGGCCAGGGGC,+,0.00) 81(GGTGCGGAGC,+,0.00) 561_WT_peak_7499 chrX 9431036 9431427 + 63 NA promoter-TSS (NM_001139467) promoter-TSS (NM_001139467) -104 NM_001139468 6907 Hs.495656 NM_005647 HPRD:02183 TBL1X EBI|SMAP55|TBL1 transducin (beta)-like 1X-linked protein-coding 0.038363 0.543367 -93(CGTCCGCG,-,0.00) 100(TCGTTCGG,-,0.00) -89(CGCGTAAA,+,0.00) -108(GGTAGCCGAGGG,+,0.00) -133(GCTGCGCA,+,0.00),-131(TGCGCAGC,-,0.00) -133(GCTGCGCAGC,+,0.00),-133(GCTGCGCAGC,-,0.00) 561_WT_peak_92 chr1 20126848 20127090 + 63 NA promoter-TSS (NM_181719) promoter-TSS (NM_181719) -559 NM_181719 255104 Hs.656313 NM_181719 HPRD:14140 TMCO4 - transmembrane and coiled-coil domains 4 protein-coding 0.024793 0.518519 -150(CCGCCTTCCCGC,+,0.00) -90(TCTTCCTGATTC,-,0.00) 561_WT_peak_1801 chr12 93793094 93793263 + 63 NA non-coding (NR_002212, exon 5 of 5) non-coding (NR_002212, exon 5 of 5) 20852 NM_001301023 11163 Hs.506325 NM_019094 HPRD:14850 NUDT4 DIPP2|DIPP2alpha|DIPP2beta nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding 0.023669 0.476471 -90(AGGCCTCT,+,0.00),-58(AGAGGCTT,-,0.00) 561_WT_peak_5390 chr4 1714383 1714723 + 63 NA promoter-TSS (NM_006527) promoter-TSS (NM_006527) -523 NM_006527 7884 Hs.298345 NM_006527 HPRD:03884 SLBP HBP stem-loop binding protein protein-coding 0.105882 0.653959 163(CTTTCCGGTCCC,-,0.00) 104(AGCCGCTT,-,0.00) -5(GCGGGAACCCGG,-,0.00),16(CCCGGAAGGCGC,-,0.00) 79(CCCGTACG,+,0.00),81(CGTACGCG,-,0.00) -112(CGGCACGT,-,0.00),-91(TCGTGGCG,+,0.00) 18(CGGAAGGCGCGG,+,0.00) 23(GGCGCGGC,-,0.00) -53(CGCGGCTCTGCT,-,0.00) -144(CGACGCGG,+,0.00) -68(CCGGCCTGGGTG,+,0.00) 561_WT_peak_4102 chr2 64450319 64450493 + 63 NA Intergenic Intergenic -5129 NR_120420 100507006 Hs.442789 NR_120420 LOC100507006 - uncharacterized LOC100507006 ncRNA 0.005747 0.422857 561_WT_peak_5169 chr3 98274797 98275311 + 63 NA Intergenic Intergenic 24311 NM_005290 2838 Hs.563128 NM_005290 HPRD:03102 GPR15 BOB G protein-coupled receptor 15 protein-coding 0.009728 0.390291 561_WT_peak_2911 chr16 75550836 75551083 + 63 NA Intergenic CpG 18109 NM_024533 23563 Hs.745424 NM_012126 HPRD:07059 CHST5 I-GlcNAc-6-ST|I-GlcNAc6ST|glcNAc6ST-3|gn6st-3|hIGn6ST carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 protein-coding 0.093117 0.737903 -112(GGTGGCCGAG,+,0.00) 22(CCCCCCTCCGGG,+,0.00),67(CCGGGGACGCCG,-,0.00) -8(CGGGTAAA,+,0.00) -50(CGGGGCTCCGGG,-,0.00) 72(GACGCCGCCC,-,0.00) 561_WT_peak_2612 chr15 91565836 91566051 + 63 NA promoter-TSS (NM_018668) promoter-TSS (NM_018668) 91 NR_110104 101926911 Hs.459366 NR_110104 ENSG00000214432 LOC101926911 - uncharacterized LOC101926911 ncRNA 0.083721 0.606481 -138(CGCGTACC,+,0.00) -157(CCTTTCGCTCCC,-,0.00),-8(GGGAGGCGGAGG,+,0.00) -64(GCGGCGCCTGGG,+,0.00) 561_WT_peak_5504 chr4 76981004 76981218 + 63 NA intron (NM_001130017, intron 1 of 9) intron (NM_001130017, intron 1 of 9) -14737 NM_001179 419 Hs.24976 NM_001179 HPRD:04363 ART3 ARTC3 ADP-ribosyltransferase 3 protein-coding 0.000000 0.386047 561_WT_peak_4693 chr20 52367932 52368221 + 63 NA Intergenic Intergenic 124172 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo 0.006920 0.434483 561_WT_peak_4435 chr2 201980816 201981018 + 63 NA promoter-TSS (NM_001202516) promoter-TSS (NM_001202516) 40 NM_001127184 8837 Hs.390736 NM_003879 HPRD:04671 CFLAR CASH|CASP8AP1|CLARP|Casper|FLAME|FLAME-1|FLAME1|FLIP|I-FLICE|MRIT|c-FLIP|c-FLIPL|c-FLIPR|c-FLIPS CASP8 and FADD-like apoptosis regulator protein-coding 0.054455 0.556650 -77(GAAACAGCGAGC,+,0.00) 561_WT_peak_3534 chr18 74779390 74779670 + 63 NA intron (NM_001025101, intron 2 of 8) intron (NM_001025101, intron 2 of 8) -50475 NM_001025092 4155 Hs.551713 NM_002385 HPRD:01158 MBP - myelin basic protein protein-coding 0.032143 0.562278 43(CGCTGGCCCTGG,-,0.00) 39(GCCGCGCTGGCC,+,0.00) 561_WT_peak_667 chr1 198583464 198583671 + 63 NA Intergenic MER39|LTR|ERV1 -24531 NM_001267798 5788 Hs.654514 NM_002838 HPRD:01050 PTPRC B220|CD45|CD45R|GP180|L-CA|LCA|LY5|T200 protein tyrosine phosphatase, receptor type, C protein-coding 0.004831 0.480769 561_WT_peak_2059 chr13 52026930 52027128 + 63 NA promoter-TSS (NR_103812) promoter-TSS (NR_103812) 246 NM_012141 26512 Hs.439440 NM_012141 HPRD:05063 INTS6 DBI-1|DDX26|DDX26A|DICE1|HDB|INT6|Notchl2 integrator complex subunit 6 protein-coding 0.060606 0.713568 -129(CCCCGCTCCCGG,+,0.00) -123(TCCCGGCCCC,+,0.00) -150(CCCCCGCC,-,0.00) -147(CCGCCTCG,-,0.00) -92(CGGGCCTGGCTC,+,0.00) 561_WT_peak_2170 chr14 35099063 35099288 + 63 NA 5' UTR (NM_021249, exon 1 of 13) 5' UTR (NM_021249, exon 1 of 13) 140 NM_021249 58533 Hs.356647 NM_021249 HPRD:12086 SNX6 MSTP010|TFAF2 sorting nexin 6 protein-coding 0.106667 0.699115 8(AGGCTGGCGCGG,-,0.00),23(CCGCGCCCGCCC,+,0.00) -40(CGGGGAAA,+,0.00) 13(GGCGCGGT,-,0.00) -55(GCGGGCACGGCG,+,0.00),15(CGCGGTCCCCGC,-,0.00),26(CGCCCGCCCCGC,-,0.00),41(CGCTGCCCCCAC,-,0.00) 561_WT_peak_703 chr1 206763568 206763831 + 63 NA Intergenic MIRb|SINE|MIR 22205 NM_006893 1939 Hs.497581 NM_006893 HPRD:01057 EIF2D HCA56|LGTN eukaryotic translation initiation factor 2D protein-coding 0.007605 0.416667 561_WT_peak_50 chr1 9747675 9747923 + 63 NA intron (NM_005026, intron 1 of 23) (TG)n|Simple_repeat|Simple_repeat -33155 NR_027045 644997 Hs.568595 NM_001045478 ENSG00000179840 C1orf200 - chromosome 1 open reading frame 200 ncRNA 0.064516 0.610442 49(TAGGGACG,-,0.00) -161(CCCGGGCTCCGC,-,0.00) -157(GGCTCCGCCC,-,0.00) -125(CAGCCAGGGTGC,-,0.00) 561_WT_peak_3875 chr19 51228439 51228644 + 63 NA exon (NM_002975, exon 4 of 4) exon (NM_002975, exon 4 of 4) 1936 NM_002975 6320 Hs.512680 NM_002975 HPRD:05277 CLEC11A CLECSF3|LSLCL|P47|SCGF C-type lectin domain family 11, member A protein-coding 0.136585 0.718447 -36(TCGGCGCC,+,0.00) -8(TCCGCTCAGCCC,+,0.00) -55(CGCTCACCCCGC,-,0.00) -19(GCCTCGCCGC,-,0.00) 561_WT_peak_6309 chr6 37016779 37016961 + 63 NA Intergenic Intergenic 43447 NM_173558 221472 Hs.509664 NM_173558 HPRD:05478 FGD2 ZFYVE4 FYVE, RhoGEF and PH domain containing 2 protein-coding 0.021978 0.551913 -121(CGGGGAAGGCCC,-,0.00) 1(CCTTCCCAGC,-,0.00) 561_WT_peak_1461 chr11 95976565 95976805 + 63 NA intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -97917 NR_036125 100422991 NR_036125 miRBase:MI0014197 MIR1260B - microRNA 1260b ncRNA 0.045833 0.518672 -86(GCGGAGCCAGAC,+,0.00) 561_WT_peak_5499 chr4 73935086 73935266 + 63 NA exon (NM_173827, exon 1 of 6) exon (NM_173827, exon 1 of 6) 300 NM_173827 285521 Hs.356697 NM_173827 HPRD:08249 COX18 COX18HS COX18 cytochrome C oxidase assembly factor protein-coding 0.094444 0.685083 -117(CGTGGCGG,+,0.00) -120(GCCCGTGGCGGC,-,0.00),-62(GCGGCCAGGGCC,+,0.00) 561_WT_peak_7453 chr9 132222962 132223160 + 63 NA Intergenic Intergenic -27878 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 - long intergenic non-protein coding RNA 963 ncRNA 0.050505 0.668342 -14(TCTGTCGG,-,0.00) -60(CCCCCGGC,-,0.00) 561_WT_peak_5672 chr5 14664362 14664605 + 63 NA promoter-TSS (NM_138348) promoter-TSS (NM_138348) -300 NM_138348 90268 Hs.406335 NM_138348 HPRD:14266 OTULIN FAM105B|GUM OTU deubiquitinase with linear linkage specificity protein-coding 0.115226 0.688525 -125(CCGGGCAGGACG,-,0.00) -138(GGCGGGGG,+,0.00) -45(CCGCGACG,-,0.00) -106(GCTTCACAGC,-,0.00) 14(CACCCAGGACGC,-,0.00) 561_WT_peak_5829 chr5 78810121 78810400 + 63 NA promoter-TSS (NM_004272) promoter-TSS (NM_004272) -601 NM_001277078 9456 Hs.591761 NM_004272 HOMER1 HOMER|HOMER1A|HOMER1B|HOMER1C|SYN47|Ves-1 homer homolog 1 (Drosophila) protein-coding 0.093190 0.707143 -140(GGCGGCGGAG,+,0.00),-118(GGGGGCCGAG,+,0.00) -33(TGGCGGCT,+,0.00) 20(CCGACCGC,+,0.00) 100(TAGCAACG,-,0.00) -93(GCTGGGCCGGCG,+,0.00) 561_WT_peak_7236 chr9 26956186 26956239 + 63 NA promoter-TSS (NM_025103) promoter-TSS (NM_025103) 93 NR_121605 101929602 NR_121605 ENSG00000234676 IFT74-AS1 - IFT74 antisense RNA 1 ncRNA 0.056604 0.425926 561_WT_peak_3555 chr19 984236 984544 + 63 NA promoter-TSS (NM_024100) promoter-TSS (NM_024100) 62 NM_024100 57418 Hs.325321 NM_024100 HPRD:18296 WDR18 Ipi3|R32184_1 WD repeat domain 18 protein-coding 0.129870 0.721683 -11(CTCGGCGGCC,-,0.00),31(CTCGGGCGCC,-,0.00) -128(GGGCCGCCGCTC,-,0.00),80(GGCCTGGCGCTG,-,0.00) -98(CGTCCGCG,-,0.00) -134(GCCGCGGG,+,0.00),75(CCCGCGGC,-,0.00) -158(TGCGCGGG,-,0.00) -141(CGCTGGGGCCGC,-,0.00),-131(GCGGGGCCGCCG,+,0.00) -132(CGCGGGGCCGCC,+,0.00) -134(GCCGCGGGGC,+,0.00),113(GCGGCGCAGC,+,0.00),113(GCGGCGCAGC,-,0.00) 60(GCGGCCAGGCGG,+,0.00),78(GCGGCCTGGCGC,+,0.00) 561_WT_peak_3388 chr17 79678785 79679136 + 63 NA promoter-TSS (NM_012140) promoter-TSS (NM_012140) -306 NM_012140 1468 Hs.548187 NM_012140 HPRD:08424 SLC25A10 DIC solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10 protein-coding 0.091168 0.718750 -86(AGCCGGTT,-,0.00) -60(GGGCCGGGGCTG,-,0.00),110(GGGCGCCCGCCG,+,0.00) -43(TCGGTGGG,-,0.00) -100(CGCCCGGC,-,0.00),15(CCCCCGCC,-,0.00) -83(CGGTTTTC,-,0.00) -104(ACCGCGCC,+,0.00),45(TGCGCGGC,-,0.00) -63(GCTGGGCCGGGG,+,0.00) 561_WT_peak_5264 chr3 133524639 133525203 + 63 NA intron (NM_021203, intron 2 of 7) CpG 22044 NM_021203 58477 Hs.12152 NM_021203 HPRD:18105 SRPRB APMCF1 signal recognition particle receptor, B subunit protein-coding 0.079787 0.654867 228(GATGCCGGGCAA,-,0.00) -42(AGACACCT,-,0.00) 116(CCGGGGACGCGG,-,0.00) -68(GCCGGGGG,+,0.00) -95(TCGCGCCG,+,0.00),-32(CGGCAGGA,-,0.00) -32(CGGCAGGAGCTG,+,0.00) -148(CGTCGCTT,+,0.00) 127(GGGCTGAGAGGG,-,0.00) -145(CGCTTTTG,-,0.00),68(CGGGTTTG,-,0.00) -73(GCGGTGCCGGGG,+,0.00) -102(CGCGGACTCGCG,+,0.00) 60(GGTCATGGCGGG,-,0.00) 561_WT_peak_6318 chr6 41499651 41499855 + 62 NA Intergenic Intergenic -14411 NM_001012426 116113 Hs.131436 NM_138457 HPRD:10600 FOXP4 hFKHLA forkhead box P4 protein-coding 0.029412 0.482927 561_WT_peak_5958 chr5 139944185 139944424 + 62 NA promoter-TSS (NM_133172) promoter-TSS (NM_133172) -115 NM_133173 10307 Hs.529449 NM_006051 HPRD:04089 APBB3 FE65L2|SRA amyloid beta (A4) precursor protein-binding, family B, member 3 protein-coding 0.112971 0.650000 -153(CGCGCACG,+,0.00) 30(CGGCACGA,-,0.00) 561_WT_peak_4255 chr2 112196943 112197052 + 62 NA intron (NR_024373, intron 1 of 1) intron (NR_024373, intron 1 of 1) 55695 NR_015395 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-1HG AGD2|LINC00978 MIR4435-1 host gene (non-protein coding) ncRNA 0.009174 0.418182 561_WT_peak_6746 chr7 91510017 91510405 + 62 NA promoter-TSS (NM_001301135) promoter-TSS (NM_001301135) -177 NM_006980 7978 Hs.532216 NM_006980 HPRD:08373 MTERF1 MTERF mitochondrial transcription termination factor 1 protein-coding 0.074742 0.606684 -155(AGCGGCTA,-,0.00) 132(CCGGCCGA,+,0.00) -70(TCGTGGCG,+,0.00) -41(CGACGCTA,+,0.00) -52(CCTTCGCAGCCC,+,0.00) -44(GCCCGACG,-,0.00),134(GGCCGACG,-,0.00) 44(GTGGGGCCTGGG,+,0.00) -69(CGTGGCGG,+,0.00) -52(CCTTCGCAGC,-,0.00) -33(GGGGCCTGGCAG,+,0.00) 561_WT_peak_1643 chr12 31477241 31477631 + 62 NA non-coding (NR_026806, exon 1 of 1) non-coding (NR_026806, exon 1 of 1) 186 NR_026806 79857 Hs.534485 NM_024799 ENSG00000177340 FLJ13224 - uncharacterized LOC79857 ncRNA 0.115385 0.723785 -151(GCTCCCGGGCCA,-,0.00) -97(CTCGGCCGTC,-,0.00),-42(CTCGGTCGCC,-,0.00) -80(CCGACGCC,+,0.00) -132(CCGGCCGA,+,0.00),-41(TCGGTCGC,-,0.00) 152(GCCGGGGG,+,0.00),197(GCCGGGCG,+,0.00) -91(CGTCGCAA,+,0.00),34(TAGCGCCG,-,0.00) 130(CGCCCAGGCGGC,-,0.00) -16(GCGGGGAAGC,+,0.00) 561_WT_peak_6250 chr6 29617622 29617794 + 62 NA Intergenic Intergenic -7050 NM_001008228 4340 Hs.141308 NM_002433 HPRD:11831 MOG BTN6|BTNL11|MOGIG2|NRCLP7 myelin oligodendrocyte glycoprotein protein-coding 0.023256 0.549133 561_WT_peak_5947 chr5 138677673 138677875 + 62 NA promoter-TSS (NM_001033112) promoter-TSS (NM_001033112) 253 NR_109830 51247 Hs.396644 NM_016480 HPRD:05726 PAIP2 PAIP-2|PAIP2A poly(A) binding protein interacting protein 2 protein-coding 0.069307 0.630542 -1(GGGCCGACTT,+,0.00) -59(GTCCATTGCGGC,-,0.00) 561_WT_peak_2456 chr15 44719578 44719865 + 62 NA 5' UTR (NM_016396, exon 1 of 13) 5' UTR (NM_016396, exon 1 of 13) 142 NM_016396 51496 Hs.497967 NM_016396 HPRD:13697 CTDSPL2 HSPC129 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 protein-coding 0.069686 0.565972 60(CCATCCGGGTCC,-,0.00) 50(AGGCCGCT,+,0.00) 93(TCGGTAGG,-,0.00) 41(TGCGCGGA,-,0.00) 50(AGGCCGCTTT,+,0.00) 561_WT_peak_2716 chr16 19126083 19126217 + 62 NA non-coding (NR_028028, exon 2 of 2) non-coding (NR_028028, exon 2 of 2) 896 NR_028028 162073 Hs.530899 NM_001034841 HPRD:18743 ITPRIPL2 - inositol 1,4,5-trisphosphate receptor interacting protein-like 2 protein-coding 0.104478 0.696296 -63(GCCGCGCC,+,0.00) -68(GGCTGGCCGCGC,-,0.00) -71(GCGGGCTGGCCG,+,0.00) 561_WT_peak_3044 chr17 10600865 10601133 + 62 NA promoter-TSS (NM_004589) promoter-TSS (NM_004589) 72 NM_020233 56985 Hs.47668 NM_020233 ADPRM C17orf48|NBLA03831 ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent protein-coding 0.111940 0.721190 -75(AGAGGCCT,-,0.00) 32(CCGGGAAGGGGG,-,0.00) -57(GGGCCGGCGCAC,-,0.00) 13(GCCGCGGG,+,0.00) -151(CCGCTTCCTCCG,-,0.00) -71(GCCTTTCAGCCC,+,0.00) -3(TGGGCGGT,-,0.00),62(TGCGCGGC,-,0.00) 8(GCGGGGCCGCGG,+,0.00) 7(TGCGGGGCCGCG,+,0.00) 81(AAGGCGGCCC,-,0.00) 5(GCTGCGGGGC,+,0.00) 561_WT_peak_2941 chr16 87902051 87902177 + 62 NA intron (NM_003486, intron 1 of 9) intron (NM_003486, intron 1 of 9) 986 NM_003486 8140 Hs.513797 NM_003486 HPRD:02552 SLC7A5 4F2LC|CD98|D16S469E|E16|LAT1|MPE16|hLAT1 solute carrier family 7 (amino acid transporter light chain, L system), member 5 protein-coding 0.031746 0.440945 561_WT_peak_307 chr1 87170225 87171001 + 62 NA exon (NM_001206652, exon 1 of 11) exon (NM_001206652, exon 1 of 11) 360 NM_001206653 51100 Hs.136309 NM_016009 HPRD:15333 SH3GLB1 Bif-1|PPP1R70|dJ612B15.2 SH3-domain GRB2-like endophilin B1 protein-coding 0.115979 0.727156 421(GGGCCCGGCGGC,+,0.00) 226(GGCGGCCGAC,+,0.00) 383(AGAGGCCT,-,0.00) 302(CCGGGAAGGTTG,-,0.00),337(CGGCGCCCCCGG,+,0.00),411(TCCCCTCCCCGG,+,0.00),579(CCTCCACCCCGG,+,0.00) 150(TCGCCGCC,+,0.00),331(TCGACGCG,+,0.00) 66(GGGCTGGCGCCG,-,0.00),120(GCGCCCCAGCCC,+,0.00) -32(CCGACTGA,+,0.00),160(TAGGTCGG,-,0.00),164(TCGGCCGG,-,0.00) 493(GGGGCCGGGA,-,0.00) -146(CCCGCGGC,-,0.00),175(CGCCCGGC,-,0.00) 253(TCGCGCCG,+,0.00) 444(CCGCTCCTGCCC,-,0.00) 154(CGCCGCTA,+,0.00) 229(GGCCGACG,-,0.00) 399(GGCGCGGC,-,0.00) -145(CCGCGGCCCGCG,+,0.00),-13(CGCTGCCGCCGC,-,0.00),13(CCCTCGCCCCGC,-,0.00),63(GCGGGGCTGGCG,+,0.00),67(GGCTGGCGCCGC,-,0.00),166(GGCCGGCTCCGC,-,0.00),295(GCGGCGCCCGGG,+,0.00),418(CCCGGGCCCGGC,-,0.00),419(CCGGGCCCGGCG,+,0.00) -154(GGCTCCGCCC,-,0.00),170(GGCTCCGCCC,-,0.00) 145(CCGCCTCG,-,0.00),185(CCGCCTAG,-,0.00),332(CGACGCGG,+,0.00),476(CGAGGCGG,+,0.00) -148(GCCCCGCGGC,-,0.00),60(GCTGCGGGGC,+,0.00),147(GCCTCGCCGC,-,0.00) 126(CAGCCCGGCCGC,-,0.00) 561_WT_peak_6673 chr7 55433520 55433874 + 62 NA 5' UTR (NM_018697, exon 1 of 9) 5' UTR (NM_018697, exon 1 of 9) 556 NM_018697 55915 Hs.595384 NM_018697 HPRD:13956 LANCL2 GPR69B|TASP LanC lantibiotic synthetase component C-like 2 (bacterial) protein-coding 0.132768 0.726761 -105(CCGCTCCTCCCG,-,0.00),-44(CGGAGGAGGCGG,+,0.00) -56(TGCGCGGG,-,0.00) -30(GCGGGGCGAGCT,+,0.00) -135(CCGCGACG,-,0.00) -33(GCGGCGGGGC,+,0.00) -86(GCGGCCTCGCTC,+,0.00) 561_WT_peak_1054 chr10 75544998 75545246 + 62 NA promoter-TSS (NM_001242488) promoter-TSS (NM_001242488) -260 NM_001242487 23053 Hs.65135 NM_015037 HPRD:17199 ZSWIM8 KIAA0913 zinc finger, SWIM-type containing 8 protein-coding 0.024194 0.493976 -61(TGGCGGCT,+,0.00) -66(ATGCATGGCGGC,-,0.00) 561_WT_peak_2373 chr14 102414393 102414563 + 62 NA Intergenic CpG -16387 NM_001376 1778 Hs.614080 NM_001376 HPRD:02524 DYNC1H1 DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein, cytoplasmic 1, heavy chain 1 protein-coding 0.111765 0.666667 -11(CGGGGAAGGCCC,-,0.00) -67(GTCAGACG,-,0.00) 561_WT_peak_5257 chr3 130745319 130745591 + 62 NA promoter-TSS (NM_024800) promoter-TSS (NM_024800) -239 NM_024800 79858 Hs.657336 NM_024800 HPRD:14821 NEK11 - NIMA-related kinase 11 protein-coding 0.066176 0.619048 78(AGGGCTGGGA,-,0.00) 561_WT_peak_2584 chr15 85201669 85201839 + 62 NA promoter-TSS (NM_021077) promoter-TSS (NM_021077) 48 NM_205858 4828 Hs.386470 NM_021077 HPRD:01210 NMB - neuromedin B protein-coding 0.070588 0.678363 -127(GGCGGCGGAG,+,0.00) -119(AGCCGCTT,-,0.00) -56(CCCTCTGAGCCT,+,0.00) -4(CGGGTAAC,+,0.00) -110(CCCTGGCCCTGC,-,0.00) -124(GGCGGAGCCGCT,+,0.00) -133(GGCCCCGGCGGC,-,0.00) -126(GCGGCGGAGC,+,0.00) 561_WT_peak_6526 chr6 155635305 155635575 + 62 NA exon (NM_016020, exon 1 of 7) exon (NM_016020, exon 1 of 7) 177 NM_016020 51106 Hs.279908 NM_016020 TFB1M CGI75|mtTFB|mtTFB1 transcription factor B1, mitochondrial protein-coding 0.070370 0.605166 -102(CCCCCGGC,-,0.00) -149(CGTCGCAC,+,0.00) 0(GCTTCGCTGC,-,0.00) 561_WT_peak_7466 chr9 134273775 134273962 + 62 NA Intergenic Intergenic -31609 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline-rich coiled-coil 2B protein-coding 0.026738 0.500000 561_WT_peak_5734 chr5 49736486 49736921 + 62 NA intron (NM_198449, intron 1 of 8) CpG 531 NM_198449 133418 Hs.561411 NM_198449 HPRD:13271 EMB GP70 embigin protein-coding 0.091954 0.653670 181(GCGCCCTCCGCC,+,0.00) -162(ATGTGGCT,+,0.00),-124(AAGTCGCT,+,0.00) -46(CCTACGCG,-,0.00) -123(AGTCGCTA,+,0.00),57(CGTAGCTA,+,0.00) 237(GTCCGCCG,-,0.00) -37(CCGACTCG,-,0.00) 561_WT_peak_3425 chr18 9090983 9091329 + 62 NA Intergenic Intergenic -11472 NM_021074 4729 Hs.464572 NM_021074 HPRD:02757 NDUFV2 CI-24k NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa protein-coding 0.008671 0.463977 561_WT_peak_6032 chr5 176560171 176560517 + 62 NA promoter-TSS (NM_022455) promoter-TSS (NM_022455) 264 NM_172349 64324 Hs.106861 NM_022455 HPRD:09455 NSD1 ARA267|KMT3B|SOTOS|SOTOS1|STO nuclear receptor binding SET domain protein 1 protein-coding 0.104046 0.752161 170(GCAGCCGGGCCG,-,0.00) 166(CCGGGCAGCCGG,-,0.00) 96(ACGACGCC,+,0.00) 17(CGCGTAGG,+,0.00) -144(TCGGGCCG,+,0.00),-40(CGGGACGA,-,0.00),41(CGGCCCGA,-,0.00) -18(GCCGCGCC,+,0.00) 45(CCGAGGCCAGCG,+,0.00),104(CGCAGGCCCCGA,-,0.00),154(CTCAGGCCCCGC,-,0.00) 171(CAGCCGGGCCGG,-,0.00) 561_WT_peak_2477 chr15 50647400 50647629 + 62 NA promoter-TSS (NM_181427) promoter-TSS (NM_181427) 91 NM_181427 2553 Hs.654350 NM_002041 HPRD:15975 GABPB1 BABPB2|E4TF1|E4TF1-47|E4TF1-53|E4TF1B|GABPB|GABPB2|NRF2B1|NRF2B2 GA binding protein transcription factor, beta subunit 1 protein-coding 0.069869 0.578261 -149(CATCCCTCCCGG,+,0.00) -44(GGGGAGAGAGGG,-,0.00) -138(GACCCGGCCC,-,0.00) 561_WT_peak_3075 chr17 20937652 20937887 + 62 NA intron (NM_015276, intron 1 of 12) Tigger7|DNA|TcMar-Tigger 8583 NM_015276 23326 Hs.462492 NM_015276 ENSG00000124422 USP22 USP3L ubiquitin specific peptidase 22 protein-coding 0.017021 0.402542 -125(CAAAACCA,+,0.00) 561_WT_peak_1361 chr11 65269626 65270169 + 62 NA non-coding (NR_002819, exon 1 of 1) non-coding (NR_002819, exon 1 of 1) 4664 NR_002819 378938 Hs.621695 NR_002819 ENSG00000251562 MALAT1 HCN|LINC00047|MALAT-1|NCRNA00047|NEAT2|PRO2853|mascRNA metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) ncRNA 0.000000 0.341912 19(AAGTGGCT,+,0.00) 561_WT_peak_5883 chr5 118323980 118324197 + 62 NA exon (NM_173666, exon 1 of 6) exon (NM_173666, exon 1 of 6) 152 NM_173666 285605 Hs.655891 NM_173666 DTWD2 - DTW domain containing 2 protein-coding 0.124424 0.729358 -129(CTCGGCCGGC,-,0.00) -41(CCGCCCTCCCGC,+,0.00) -128(TCGGCCGG,-,0.00),-20(TCGTTCGG,-,0.00) 39(TCGTGCCT,+,0.00) 14(GCCGCGCA,+,0.00) 561_WT_peak_3178 chr17 40086433 40086619 + 62 NA promoter-TSS (NR_110662) promoter-TSS (NR_110662) -350 NR_110662 83538 Hs.201134 NM_031421 TTC25 - tetratricopeptide repeat domain 25 protein-coding 0.048387 0.534759 561_WT_peak_4333 chr2 157189370 157189643 + 62 NA promoter-TSS (NM_006186) promoter-TSS (NM_006186) -219 NM_006186 4929 Hs.563344 NM_006186 HPRD:03493 NR4A2 HZF-3|NOT|NURR1|RNR1|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding 0.084249 0.598540 23(CTCGGCCGCT,-,0.00) -24(CGTCGCGA,+,0.00) -8(TTTCCCCG,-,0.00) -38(TGCGCAGC,-,0.00),11(CCCGCGCA,+,0.00) -157(GGGCCGATTT,+,0.00) 76(GCCGGCGTGGCC,+,0.00) 19(GCGGCTCGGCCG,+,0.00) 561_WT_peak_6482 chr6 135449777 135450052 + 62 NA Intergenic Intergenic -52539 NM_001161660 4602 Hs.606320 NM_005375 HPRD:01810 MYB Cmyb|c-myb|c-myb_CDS|efg v-myb avian myeloblastosis viral oncogene homolog protein-coding 0.010909 0.423913 -135(CAGTTTTG,-,0.00) -10(GTGAGCCGCAGG,+,0.00) -4(CGCAGGCCCCGA,-,0.00) -33(CTGCCAGGCTGC,-,0.00) 561_WT_peak_4609 chr20 33460555 33460729 + 62 NA promoter-TSS (NM_178026) promoter-TSS (NM_178026) 19 NM_178026 2686 Hs.433738 NM_178026 HPRD:07488 GGT7 D20S101|GGT4|GGTL3|GGTL5|dJ18C9.2 gamma-glutamyltransferase 7 protein-coding 0.114943 0.760000 -37(GGCGGAGGGCGG,-,0.00) -112(CTCCGCCGCC,-,0.00) -63(AAGTGGCT,+,0.00) -6(CCGGGAGGGGGC,-,0.00) -76(CAGCGCCTGCCG,+,0.00) -32(AGGGCGGGGC,-,0.00) -53(GGCGGGGG,+,0.00) -90(GCCCCCCAGC,-,0.00) 561_WT_peak_3108 chr17 29058320 29058497 + 62 NA intron (NR_024187, intron 1 of 7) CpG 21782 NR_024187 440423 Hs.628886 NR_024187 SUZ12P1 SUZ12P suppressor of zeste 12 homolog pseudogene 1 pseudo 0.050847 0.516854 -28(AGGCCGCT,+,0.00) -81(CTAAACCG,+,0.00) -9(TTTTCCCG,-,0.00) -43(CCGGGGCCAGCA,+,0.00) -33(CAGGAAGGCCGC,-,0.00) 561_WT_peak_1809 chr12 95467344 95467543 + 62 NA promoter-TSS (NM_001127362) promoter-TSS (NM_001127362) -39 NM_001032287 7181 Hs.108301 NM_003297 HPRD:03318 NR2C1 TR2 nuclear receptor subfamily 2, group C, member 1 protein-coding 0.095477 0.665000 -91(TCGTGACG,+,0.00) -113(GGGGAGAAGCGG,+,0.00) -120(TAGCAACG,-,0.00) -160(CTCGGCTCGGCG,-,0.00) 561_WT_peak_2254 chr14 64337361 64337557 + 62 NA intron (NM_182914, intron 1 of 115) MIR|SINE|MIR 17776 NM_182914 23224 Hs.745014 NM_015180 HPRD:09763 SYNE2 EDMD5|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing, nuclear envelope 2 protein-coding 0.005102 0.375635 561_WT_peak_4847 chr22 21356494 21356671 + 62 NA promoter-TSS (NM_001008695) promoter-TSS (NM_001008695) -178 NM_030573 80764 Hs.512756 NM_030573 HPRD:15500 THAP7 - THAP domain containing 7 protein-coding 0.118644 0.640449 -143(CGGCGCGA,-,0.00),-21(CGGCACGA,-,0.00) -144(GCGGCGCGAGCG,+,0.00),-9(GCGGCCCCAGCG,+,0.00) -12(GGAGCGGCCC,-,0.00) -114(CCGCGTCG,-,0.00) 561_WT_peak_4758 chr21 30257506 30257849 + 62 NA promoter-TSS (NR_047510) promoter-TSS (NR_047510) 18 NR_047510 29104 Hs.163846 NM_013240 N6AMT1 C21orf127|HEMK2|MTQ2|N6AMT|m.HsaHemK2P N-6 adenine-specific DNA methyltransferase 1 (putative) protein-coding 0.096210 0.622093 84(GGGCTGGCGTCC,-,0.00) -72(CGTACACG,-,0.00),19(CGCGTGCG,+,0.00) -66(CGTCGCTG,+,0.00),-24(TAGCGAAG,-,0.00) 561_WT_peak_5089 chr3 46411426 46411587 + 62 NA promoter-TSS (NM_000579) promoter-TSS (NM_000579) -127 NM_000579 1234 Hs.450802 NM_000579 HPRD:03223 CCR5 CC-CKR-5|CCCKR5|CCR-5|CD195|CKR-5|CKR5|CMKBR5|IDDM22 chemokine (C-C motif) receptor 5 (gene/pseudogene) protein-coding 0.018634 0.456790 -50(CCGCCAAG,-,0.00) 561_WT_peak_5404 chr4 6641906 6642126 + 62 NA 5' UTR (NM_033296, exon 1 of 2) 5' UTR (NM_033296, exon 1 of 2) 198 NM_033296 93621 Hs.406590 NM_033296 HPRD:17589 MRFAP1 PAM14|PGR1 Morf4 family associated protein 1 protein-coding 0.077273 0.574661 -131(ACGACGCC,+,0.00) -127(CGCCCGGC,-,0.00) -101(TAGAGACG,-,0.00) 3(ACCGCGCC,+,0.00) -87(CGCCATGTCGGC,-,0.00) -80(TCGGCCAGGCTG,+,0.00) 561_WT_peak_2936 chr16 87421646 87421954 + 62 NA intron (NM_001282683, intron 2 of 9) intron (NM_001282683, intron 2 of 9) 3913 NM_001282683 79791 Hs.567582 NM_024735 FBXO31 FBX14|FBXO14|Fbx31|pp2386 F-box protein 31 protein-coding 0.019481 0.469256 561_WT_peak_4917 chr22 39486515 39487078 + 62 NA Intergenic Intergenic -6433 NM_001166004 164668 Hs.440515 NM_181773 HPRD:16508 APOBEC3H A3H|ARP-10|ARP10 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H protein-coding 0.026643 0.625887 242(GGAGGAGGCAGG,-,0.00) -13(TGGTTTTG,-,0.00) 561_WT_peak_3352 chr17 74268116 74268454 + 62 NA TTS (NM_182565) TTS (NM_182565) 6999 NM_182565 283991 Hs.744981 NM_182565 HPRD:14533 UBALD2 FAM100B UBA-like domain containing 2 protein-coding 0.050296 0.663717 95(TCCCCCTCCCCC,+,0.00) -71(GCCTCCGGGCCT,-,0.00) 103(CCCCCGCC,-,0.00) 149(CCCTCTCAGCAC,+,0.00) 59(CAGTTTTG,-,0.00) -4(GCCCCGCTGC,-,0.00) 561_WT_peak_5839 chr5 81267555 81267744 + 62 NA promoter-TSS (NM_001131028) promoter-TSS (NM_001131028) -195 NM_031482 83734 Hs.713698 NM_031482 HPRD:16497 ATG10 APG10|APG10L|pp12616 autophagy related 10 protein-coding 0.100529 0.731579 -125(AGCCGCCT,-,0.00) -69(GGCGGGGG,+,0.00),-29(GGCGGGGG,+,0.00) -32(CTTGGCGG,+,0.00) -35(GGCCTTGGCGGG,-,0.00) 561_WT_peak_4559 chr20 5591900 5592082 + 62 NA promoter-TSS (NM_019593) promoter-TSS (NM_019593) -319 NM_019593 56261 Hs.636359 NM_019593 HPRD:10025 GPCPD1 GDE5|GDPD6|PREI4 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) protein-coding 0.054945 0.557377 -76(GGAGGCCGAG,+,0.00) -142(AGCCGCCT,-,0.00) -116(GCCGGGCG,+,0.00) -145(CAAAGCCG,+,0.00) -112(GGCGCGGT,-,0.00) -70(CGAGGCGG,+,0.00) 561_WT_peak_7409 chr9 117692684 117692958 + 62 NA promoter-TSS (NM_001244) promoter-TSS (NM_001244) 54 NM_001244 944 Hs.494901 NM_001244 TNFSF8 CD153|CD30L|CD30LG tumor necrosis factor (ligand) superfamily, member 8 protein-coding 0.036496 0.516364 -12(AGGTGGCT,+,0.00) 8(CGCGTAGG,+,0.00) 561_WT_peak_5199 chr3 110533233 110533614 + 62 NA Intergenic Intergenic 255383 NR_045114 100506555 Hs.535689 NR_045114 PVRL3-AS1 - PVRL3 antisense RNA 1 ncRNA 0.005249 0.452880 -20(AGAGGCTT,-,0.00) 561_WT_peak_342 chr1 101361778 101362152 + 62 NA intron (NM_133496, intron 1 of 10) intron (NM_133496, intron 1 of 10) 331 NM_133496 148867 Hs.533903 NM_133496 HPRD:15369 SLC30A7 ZNT7|ZnT-7|ZnTL2 solute carrier family 30 (zinc transporter), member 7 protein-coding 0.045455 0.573333 -25(GCGGGGAGGGGG,-,0.00) 152(TCCCGGCTCT,+,0.00) -67(CGGCAAGA,-,0.00) 193(GTCCGACA,-,0.00) -150(GACCCGGCCC,-,0.00) 195(CCGACAAG,-,0.00) 561_WT_peak_6945 chr8 22875988 22876172 + 62 NA 3' UTR (NM_001160036, exon 12 of 12) 3' UTR (NM_001160036, exon 12 of 12) 18988 NM_015178 23221 Hs.372688 NM_015178 HPRD:06300 RHOBTB2 DBC2 Rho-related BTB domain containing 2 protein-coding 0.032609 0.610811 -4(CCGGGCTGGCGG,-,0.00) -127(TCGACTCC,+,0.00) -40(GGGGCCTGGCCT,+,0.00),-4(CCGGGCTGGCGG,+,0.00) 561_WT_peak_4418 chr2 197107036 197107390 + 62 NA intron (NM_020760, intron 19 of 28) intron (NM_020760, intron 19 of 28) -17535 NR_110225 101927482 Hs.191841 NR_110225 ENSG00000229056 LOC101927482 - uncharacterized LOC101927482 ncRNA 0.005650 0.366197 561_WT_peak_5516 chr4 82392851 82393032 + 62 NA 5' UTR (NM_001300736, exon 1 of 13) 5' UTR (NM_001300736, exon 1 of 13) 141 NM_001300735 153020 Hs.591696 NM_152545 HPRD:17955 RASGEF1B GPIG4 RasGEF domain family, member 1B protein-coding 0.082873 0.631868 -71(CTCGGCCTCC,-,0.00) -70(TCGGCCTCCCGG,+,0.00) -56(GCGTGCCG,+,0.00) 561_WT_peak_3893 chr19 54974178 54974494 + 62 NA exon (NM_198988, exon 1 of 1) exon (NM_198988, exon 1 of 1) 558 NM_198988 94059 Hs.590976 NM_198988 HPRD:13986 LENG9 - leukocyte receptor cluster (LRC) member 9 protein-coding 0.132911 0.728707 109(CCGAGAAGTCGG,-,0.00) 122(GGGGTCGA,-,0.00) -9(CGCACGCG,-,0.00) 105(CCCACCGA,+,0.00) 20(GCCCGGCCCG,+,0.00) 19(CGCCCGGC,-,0.00) 23(CGGCCCGA,-,0.00) -18(CGGAAGAAGCGC,+,0.00) -49(GGCGCGGT,-,0.00) 31(GCGCCGCCAGCG,+,0.00) 109(CCGAGAAG,-,0.00) 561_WT_peak_990 chr10 51623097 51623308 + 62 NA non-coding (NR_073029, exon 1 of 8) non-coding (NR_073029, exon 1 of 8) 184 NR_073030 100287932 Hs.524308 NM_006327 ENSG00000138297 TIMM23 TIM23 translocase of inner mitochondrial membrane 23 homolog (yeast) protein-coding 0.099526 0.636792 -64(TCCCCCGCCTCC,+,0.00) -157(CTTACGCG,-,0.00),-133(CGCGTGCG,+,0.00) -63(CCCCCGCC,-,0.00) -69(CCGCTTCCCCCG,-,0.00) -139(CAAATCCG,+,0.00),-80(TGGTTTTG,-,0.00) 33(CGGGTAAC,+,0.00) -68(CGCTTCCCCCGC,-,0.00) 561_WT_peak_6568 chr7 1014965 1015141 + 62 NA intron (NM_001031617, intron 1 of 2) CpG 182 NM_001031617 90639 Hs.121593 NM_001031617 COX19 - cytochrome c oxidase assembly homolog 19 (S. cerevisiae) protein-coding 0.107955 0.700565 -127(CGCTGGGCCGCG,+,0.00) 561_WT_peak_5583 chr4 119199967 119200196 + 62 NA promoter-TSS (NR_002963) promoter-TSS (NR_002963) 164 NR_034011 100093630 Hs.535762 NR_003584 ENSG00000269893 SNHG8 LINC00060|NCRNA00060 small nucleolar RNA host gene 8 (non-protein coding) ncRNA 0.078603 0.586957 -25(GGCGTCCA,-,0.00) -97(TAGGTCGG,-,0.00) -29(GCCGGGCG,+,0.00) -86(CGGCTTTG,-,0.00) 31(CGGGGAAA,+,0.00) -56(TGCGCGGA,-,0.00) -89(GGGCGGCTTT,+,0.00) 561_WT_peak_2461 chr15 45004550 45004812 + 62 NA intron (NM_004048, intron 1 of 3) MIR|SINE|MIR 996 NM_004048 567 Hs.534255 NM_004048 B2M - beta-2-microglobulin protein-coding 0.034351 0.425856 87(TGGGCGGC,-,0.00) 561_WT_peak_6721 chr7 75056980 75057190 + 62 NA intron (NM_001099415, intron 7 of 14) intron (NM_001099415, intron 7 of 14) 17480 NR_033322 155400 Hs.436034 NM_001039575 NSUN5P1 NSUN5B|WBSCR20B NOP2/Sun domain family, member 5 pseudogene 1 pseudo 0.009524 0.440758 32(GAAGCCGGGCCC,-,0.00) -96(CAAACAGGAAGC,+,0.00),-66(CAAACAGGAAGC,+,0.00),-28(AAAAGAGGAAGC,+,0.00) 561_WT_peak_3239 chr17 47647525 47647696 + 62 NA intron (NR_103773, intron 1 of 2) CpG 3816 NR_103773 100288866 Hs.720309 NR_103773 ENSG00000249906 LOC100288866 - uncharacterized LOC100288866 ncRNA 0.093567 0.726744 -36(GGTGGCCGAG,+,0.00) -58(AGCGACTT,-,0.00) -70(GGCGTGGA,-,0.00) -81(CCTGCGGAGC,+,0.00) 561_WT_peak_5739 chr5 52096308 52096490 + 62 NA exon (NM_015946, exon 2 of 3) exon (NM_015946, exon 2 of 3) 12263 NM_181501 3672 Hs.644352 NM_181501 ITGA1 CD49a|VLA1 integrin, alpha 1 protein-coding 0.071429 0.639344 -71(GCAACCGGGTCC,-,0.00) -149(TCGTGCAG,+,0.00) 0(CGGGTTAA,+,0.00) 561_WT_peak_1519 chr11 124823775 124823856 + 62 NA promoter-TSS (NM_025004) promoter-TSS (NM_025004) -202 NM_025004 80071 Hs.287555 NM_025004 HPRD:07820 CCDC15 - coiled-coil domain containing 15 protein-coding 0.086420 0.609756 561_WT_peak_7476 chr9 137028918 137029103 + 62 NA TTS (NR_023344) TTS (NR_023344) 676 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA 0.108108 0.634409 -27(GGCGACCGAG,+,0.00) 9(GGTGTCGA,-,0.00) -26(GCGACCGA,+,0.00) -72(TAGGGACG,-,0.00) -52(CGCCGAGCCGCC,+,0.00) -53(CCGCCGAGCCGC,-,0.00) 561_WT_peak_6967 chr8 29948412 29948667 + 62 NA intron (NR_039605, intron 1 of 1) intron (NR_039605, intron 1 of 1) -4383 NM_001128208 23484 Hs.146585 NM_015344 HPRD:09551 LEPROTL1 HSPC112|Vps55|my047 leptin receptor overlapping transcript-like 1 protein-coding 0.011765 0.398438 -58(TGGTTTTG,-,0.00) -105(CGTGTAAA,+,0.00) 561_WT_peak_1609 chr12 12849824 12849856 + 62 NA promoter-TSS (NM_006143) promoter-TSS (NM_006143) -719 NM_006143 2842 Hs.657862 NM_006143 HPRD:04236 GPR19 - G protein-coupled receptor 19 protein-coding 0.093750 0.575758 561_WT_peak_1696 chr12 51419527 51419968 + 62 NA 5' UTR (NM_001174129, exon 1 of 16) 5' UTR (NM_001174129, exon 1 of 16) 177 NM_001174129 4891 Hs.505545 NM_000617 HPRD:02750 SLC11A2 DCT1|DMT1|NRAMP2 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 protein-coding 0.081633 0.651584 -9(GGCGCCGA,-,0.00),47(GGCGTCGA,-,0.00) -122(CGCGTATG,+,0.00) 80(GCCGGGCG,+,0.00) 171(CCCTCCCTGCCC,+,0.00),263(CCCTCACAGCCC,+,0.00) 31(CGTCGGCC,+,0.00) -24(AGCCCGGCCC,-,0.00) -25(CAGCCCGGCCCC,-,0.00) 561_WT_peak_4602 chr20 32319606 32319856 + 62 NA non-coding (NR_104259, exon 1 of 14) non-coding (NR_104259, exon 1 of 14) 165 NM_001282935 84905 Hs.516989 NM_032819 HPRD:15781 ZNF341 - zinc finger protein 341 protein-coding 0.100000 0.717131 -146(TGGCCCGGTGAC,+,0.00) 34(GGCGGCGA,-,0.00) -123(GTGGAGCCAGGG,+,0.00),35(GCGGCGACGGCG,+,0.00) 9(CGCGTAGCCGGG,+,0.00) -13(CCGCCACG,-,0.00) -35(CCCCCTGGCGGC,-,0.00),37(GGCGACGGCGGC,-,0.00) 561_WT_peak_6818 chr7 108166316 108166499 + 62 NA intron (NM_001256011, intron 1 of 10) CpG 355 NM_001256008 50640 Hs.617340 NM_015723 HPRD:13741 PNPLA8 IPLA2(GAMMA)|IPLA2-2|IPLA2G|iPLA2gamma patatin-like phospholipase domain containing 8 protein-coding 0.081967 0.657609 -8(CCGGGATGCAGG,-,0.00) -164(CAGCGCCAGCTC,+,0.00) -122(TCGCTCGG,-,0.00) -37(TCCCGCCCCT,+,0.00) -40(TCGTCCCG,+,0.00) -158(CAGCTCCTCCCC,-,0.00) -78(CGCCGGAC,+,0.00) 561_WT_peak_3966 chr2 11605889 11606152 + 62 NA non-coding (NR_103490, exon 1 of 5) non-coding (NR_103490, exon 1 of 5) 283 NM_001278278 1876 Hs.603093 NM_198256 HPRD:04251 E2F6 E2F-6 E2F transcription factor 6 protein-coding 0.114068 0.715909 -103(TCCGTCGG,-,0.00) -39(GCCGGGCG,+,0.00),91(CGCCCGGC,-,0.00) 73(CGGCTTCCTCCG,-,0.00) -23(CCCTCGCACCCC,+,0.00) 36(GCGCCGATTT,+,0.00),86(GGCGCCGCCC,-,0.00) 561_WT_peak_5101 chr3 48956303 48956475 + 62 NA exon (NM_001123040, exon 1 of 1) exon (NM_001123040, exon 1 of 1) 108 NM_006321 10425 Hs.633601 NM_006321 HPRD:09286 ARIH2 ARI2|TRIAD1 ariadne RBR E3 ubiquitin protein ligase 2 protein-coding 0.139535 0.734104 -110(CAATCCGGTCCC,-,0.00) -145(GGCGTCGG,-,0.00) -143(CGTCGGCC,+,0.00) -30(TGCGCGGC,-,0.00) -99(CTCTGGCCCGGC,-,0.00) -119(GCTTCGCCCC,-,0.00),-56(GCCGCGAGGC,+,0.00) -55(CCGCGAGGCCGC,-,0.00) 561_WT_peak_3380 chr17 78806737 78807066 + 62 NA intron (NM_020761, intron 9 of 33) intron (NM_020761, intron 9 of 33) -27469 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA 0.051672 0.545455 7(GGGCGGGCGCGC,-,0.00) 65(CGGTTTTC,-,0.00) -111(GCTTTCTGTTTA,-,0.00) 4(CCGGGGCGGGCG,+,0.00) 561_WT_peak_1987 chr13 33160527 33160777 + 62 NA promoter-TSS (NM_015032) promoter-TSS (NM_015032) 88 NM_015032 23047 Hs.744901 NM_015032 HPRD:05624 PDS5B APRIN|AS3|CG008 PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) protein-coding 0.100000 0.649402 0(AGCCCCGGAGTG,+,0.00) -25(GCGGCGGCGGCG,+,0.00),-22(GCGGCGGCGGCG,+,0.00) 22(CGAGTCGG,+,0.00) 561_WT_peak_6703 chr7 72350298 72350574 + 62 NA 5' UTR (NM_001257190, exon 1 of 16) 5' UTR (NM_001257190, exon 1 of 16) 530 NM_001257190 9883 Hs.655217 NM_172020 HPRD:11448 POM121 P145|POM121A POM121 transmembrane nucleoporin protein-coding 0.083333 0.682310 6(GTTTTCGGGCCC,-,0.00) -148(GCCCGGCCCG,+,0.00) -42(GGGAGCCGTGGG,+,0.00) -24(GCTGCAGAGC,+,0.00) 561_WT_peak_824 chr1 244615459 244615639 + 62 NA promoter-TSS (NM_001126) promoter-TSS (NM_001126) -113 NM_001126 159 Hs.498313 NM_001126 HPRD:00050 ADSS ADEH|ADSS 2 adenylosuccinate synthase protein-coding 0.083333 0.629834 -153(GGCTTCGA,-,0.00) -65(CGTCGGAC,+,0.00) -135(CCTTCAGCACCC,-,0.00) -84(CGCGGAAGCGCG,+,0.00) -159(GGGCGGGGCT,+,0.00) 561_WT_peak_6790 chr7 102330225 102330415 + 62 NA Intergenic CpG -18144 NM_032959 246721 Hs.610255 NM_032958 HPRD:17878 POLR2J2 HRPB11B|RPB11b1 polymerase (RNA) II (DNA directed) polypeptide J2 protein-coding 0.047368 0.717277 19(TCGTGCTG,+,0.00) -67(GCTCCCTGGTTC,-,0.00) -20(AACCCGGCCC,-,0.00) 561_WT_peak_2626 chr15 95127980 95128226 + 62 NA Intergenic Intergenic 228939 NM_001159644 55784 Hs.33368 NM_018349 HPRD:07738 MCTP2 - multiple C2 domains, transmembrane 2 protein-coding 0.024390 0.477733 -152(GGAGCAGGGCGA,-,0.00) 32(AGCCGCCT,-,0.00) 561_WT_peak_2191 chr14 50234328 50234750 + 62 NA promoter-TSS (NM_014315) promoter-TSS (NM_014315) -248 NM_014315 23588 Hs.509264 NM_014315 HPRD:08824 KLHDC2 HCLP-1|HCLP1|LCP kelch domain containing 2 protein-coding 0.085308 0.628842 174(GTCGCCGGGCCC,-,0.00) -90(AAGCGACT,+,0.00) 208(CGTAGGCG,-,0.00) -158(CGCCCGGC,-,0.00) -145(CGGCAGGA,-,0.00) 85(CGGCTAAA,+,0.00) 231(GCGGCGGCGGCG,+,0.00),234(GCGGCGGCGGCG,+,0.00),237(GCGGCGGCGGCG,+,0.00),240(GCGGCGGCGGCG,+,0.00) 212(GGCGGAGGCGCG,+,0.00) 561_WT_peak_2418 chr15 31727599 31728005 + 62 NA Intergenic Intergenic 108719 NM_015995 51621 Hs.525752 NM_015995 HPRD:05620 KLF13 BTEB3|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding 0.027094 0.520885 -118(CGGTTTTC,-,0.00) -40(CGGGCAAA,+,0.00) 561_WT_peak_5190 chr3 105729764 105729887 + 62 NA Intergenic Intergenic -141938 NM_170662 868 Hs.430589 NM_170662 HPRD:05136 CBLB Cbl-b|RNF56 Cbl proto-oncogene B, E3 ubiquitin protein ligase protein-coding 0.008130 0.346774 -64(TCCTGCCG,+,0.00) 561_WT_peak_7233 chr9 22079836 22080043 + 62 NA intron (NR_003529, intron 12 of 18) intron (NR_003529, intron 12 of 18) -70627 NM_078487 1030 Hs.72901 NM_004936 HPRD:02696 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) protein-coding 0.014493 0.437500 -119(AAGTGTCT,+,0.00) 561_WT_peak_2171 chr14 35515055 35515242 + 62 NA promoter-TSS (NM_173607) promoter-TSS (NM_173607) -311 NM_001289022 283635 Hs.446357 NM_173607 HPRD:12644 FAM177A1 C14orf24 family with sequence similarity 177, member A1 protein-coding 0.032086 0.436170 -56(CAGCACGA,-,0.00) 561_WT_peak_7483 chr9 139304350 139304679 + 62 NA promoter-TSS (NM_015160) promoter-TSS (NM_015160) -511 NM_001282946 23203 Hs.495471 NM_015160 HPRD:07500 PMPCA Alpha-MPP|INPP5E|P-55 peptidase (mitochondrial processing) alpha protein-coding 0.072948 0.645455 5(GGGCCGGCGCCC,-,0.00) 79(CCGGCCGA,+,0.00) -47(TCGTGCTG,+,0.00) 90(CCGAAGAAGGGG,+,0.00) 150(CAAGACCG,+,0.00) -14(GGAACTGGAAGC,+,0.00) 2(CCGGGGCCGGCG,+,0.00) 115(TGCCATGGGGGC,-,0.00) 561_WT_peak_2181 chr14 39735935 39736527 + 62 NA promoter-TSS (NM_203355) promoter-TSS (NM_203355) 34 NR_038935 100288846 Hs.509200 NR_038935 ENSG00000258940 LOC100288846 - uncharacterized LOC100288846 ncRNA 0.096284 0.686341 173(CGACCCGGACAC,+,0.00) 2(CGCGGCCGCC,-,0.00) -34(AGACGCCT,-,0.00),108(AAGCCTCT,+,0.00) 228(GCGCCTCCCCGC,+,0.00),236(CCGCCTTCTCGC,+,0.00) -73(GGCGTCGG,-,0.00),-14(TCGCCGCC,+,0.00) -84(GGGCTGGGCCTG,-,0.00),148(GAGCGCCGGCCC,+,0.00) -61(TGGGTCGG,-,0.00),7(CCGCCCGA,+,0.00),254(CCGGCCGA,+,0.00) 361(AGGGTCGGGA,-,0.00) -71(CGTCGGCC,+,0.00) 264(CCAAACCG,+,0.00) -13(CGCCGCCGCCGC,-,0.00) 227(CGCGCCTCCCCG,-,0.00),245(CGCGGCTGCCCG,-,0.00) -37(CCGAGACG,-,0.00),12(CGAGGCGG,+,0.00) 186(TCTGCGAAGC,+,0.00) -118(CAGCGAGGCTGC,-,0.00) 561_WT_peak_4508 chr2 235334638 235334860 + 62 NA Intergenic Intergenic 70944 NM_005737 10123 Hs.111554 NM_005737 HPRD:11988 ARL4C ARL7|LAK ADP-ribosylation factor-like 4C protein-coding 0.018018 0.596413 -15(AGGGCGGGGC,-,0.00) -73(CAAAACCC,+,0.00) -14(GGGCGGGGCT,+,0.00) 561_WT_peak_6489 chr6 137476935 137477292 + 61 NA intron (NM_181309, intron 3 of 5) AmnSINE1|SINE|Deu 17672 NM_052962 116379 Hs.126891 NM_052962 HPRD:05973 IL22RA2 CRF2-10|CRF2-S1|CRF2X|IL-22BP|IL-22R-alpha-2|IL-22RA2|ZCYTOR16 interleukin 22 receptor, alpha 2 protein-coding 0.002801 0.413408 -4(ATGTGGCT,+,0.00) -58(TGGTTTTG,-,0.00) 561_WT_peak_3602 chr19 7694212 7694434 + 61 NA promoter-TSS (NM_001171155) promoter-TSS (NM_001171155) 116 NM_020196 56949 Hs.9822 NM_020196 HPRD:18306 XAB2 HCNP|HCRN|NTC90|SYF1 XPA binding protein 2 protein-coding 0.076577 0.636771 -70(GGCGTCCA,-,0.00) -93(CCGACCCA,+,0.00) -37(CCCCCGGC,-,0.00) 6(TCGGGCCG,+,0.00) 3(CGCTCGGGCCGC,-,0.00) 561_WT_peak_7469 chr9 135644976 135645146 + 61 NA intron (NM_152572, intron 11 of 12) intron (NM_152572, intron 11 of 12) -99273 NM_022779 64794 Hs.660767 NM_022779 HPRD:10860 DDX31 PPP1R25 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 protein-coding 0.035294 0.491228 -40(CAGCGAGGCCAC,-,0.00) 561_WT_peak_813 chr1 236162744 236162995 + 61 NA intron (NM_002508, intron 12 of 19) intron (NM_002508, intron 12 of 19) 65612 NM_002508 4811 Hs.356624 NM_002508 HPRD:00574 NID1 NID nidogen 1 protein-coding 0.011952 0.527778 -42(AGACGCAT,-,0.00),7(AAGCGTCT,+,0.00) 561_WT_peak_2276 chr14 72906566 72906806 + 61 NA intron (NM_001204420, intron 3 of 15) LTR33|LTR|ERVL -76842 NR_106994 102465832 NR_106994 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA 0.016667 0.510373 561_WT_peak_5223 chr3 119812740 119812916 + 61 NA 5' UTR (NM_002093, exon 1 of 12) 5' UTR (NM_002093, exon 1 of 12) 436 NM_001146156 2932 Hs.445733 NM_002093 HPRD:05418 GSK3B - glycogen synthase kinase 3 beta protein-coding 0.119318 0.740113 -47(GGCGGCGGAG,+,0.00) -93(GCCGCGGG,+,0.00) -44(GGCGGAGTCGCG,+,0.00) -100(CCGGCAAGCCGC,-,0.00) 561_WT_peak_2755 chr16 28503689 28503812 + 61 NA promoter-TSS (NM_001286105) promoter-TSS (NM_001286105) -127 NM_001042432 1201 Hs.534667 NM_000086 HPRD:08450 CLN3 BTS|JNCL ceroid-lipofuscinosis, neuronal 3 protein-coding 0.016260 0.387097 561_WT_peak_6372 chr6 74233100 74233708 + 61 NA Intergenic CpG -2649 NM_001402 1915 Hs.535192 NM_001402 HPRD:00559 EEF1A1 CCS-3|CCS3|EE1A1|EEF-1|EEF1A|EF-Tu|EF1A|GRAF-1EF|HNGC:16303|LENG7|PTI1|eEF1A-1 eukaryotic translation elongation factor 1 alpha 1 protein-coding 0.078947 0.617406 10(TGGGCCGGAAGC,+,0.00) -141(GGCGACCGAG,+,0.00) 102(GCGGCAAGGCGG,-,0.00) 132(CCGCGCCAGCTC,+,0.00) -140(GCGACCGA,+,0.00) 201(CCCGCGGC,-,0.00) 336(GGGAGGAAGCAG,+,0.00) 153(CGTCGCTG,+,0.00) 376(CGGTTTTT,-,0.00) -2(GTGGGGCCGGGG,+,0.00) 242(CCTCCGCAGC,-,0.00) 186(GCGGGCCGGCGG,+,0.00) 561_WT_peak_5381 chr3 197900150 197900327 + 61 NA intron (NM_001145248, intron 6 of 6) (TTAGGG)n|Simple_repeat|Simple_repeat 21001 NM_001145248 728262 Hs.744675 NM_001145248 FAM157A - family with sequence similarity 157, member A protein-coding 0.016949 0.500000 561_WT_peak_2616 chr15 93374972 93375203 + 61 NA Intergenic Intergenic 36373 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo 0.034632 0.599138 18(GGCGGCCCAG,+,0.00) -72(AGGCCGCT,+,0.00),-50(AGGCGTCT,+,0.00) -61(TTAACCCG,-,0.00) 561_WT_peak_312 chr1 89506934 89507110 + 61 NA Intergenic L1ME3A|LINE|L1 -18473 NM_018284 2635 Hs.720167 NM_018284 HPRD:02683 GBP3 - guanylate binding protein 3 protein-coding 0.011364 0.338983 561_WT_peak_4694 chr20 52509934 52510104 + 61 NA Intergenic Intergenic -17771 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo 0.017647 0.479532 -42(ATGCCGCT,+,0.00) -44(TCATGCCG,+,0.00) 561_WT_peak_5311 chr3 167452510 167452724 + 61 NA promoter-TSS (NM_005025) promoter-TSS (NM_005025) 13 NM_145860 11235 Hs.478150 NM_007217 HPRD:10141 PDCD10 CCM3|TFAR15 programmed cell death 10 protein-coding 0.056075 0.609302 -11(GCGACGCC,+,0.00) -163(TCAGCCATGGCC,+,0.00),-161(AGCCATGGCCCC,-,0.00) 561_WT_peak_2035 chr13 47242380 47242492 + 61 NA intron (NM_001164211, intron 2 of 19) intron (NM_001164211, intron 2 of 19) 115140 NM_015116 23143 Hs.507971 NM_015116 HPRD:14307 LRCH1 CHDC1|NP81 leucine-rich repeats and calponin homology (CH) domain containing 1 protein-coding 0.000000 0.407080 561_WT_peak_5345 chr3 184429451 184429869 + 61 NA 5' UTR (NM_022149, exon 1 of 1) 5' UTR (NM_022149, exon 1 of 1) 176 NM_022149 64110 Hs.306123 NM_022149 HPRD:14348 MAGEF1 - melanoma antigen family F, 1 protein-coding 0.102871 0.730310 -151(GCCCCCTCCTCC,+,0.00) -5(GTTTTCGGGCAG,-,0.00) -144(CCTCCCTCCCGG,+,0.00) 19(CGCGTACA,+,0.00),21(CGTACACG,-,0.00) -100(GCGGTCGG,-,0.00) 49(GCCGCGCA,+,0.00) -164(GGCGGGCTCCGC,-,0.00) -104(CGAGGCGG,+,0.00) -159(GCTCCGCAGC,-,0.00),-108(CCTGCGAGGC,+,0.00) 561_WT_peak_848-2 chr10 3826767 3827380 + 61 NA intron (NM_001300, intron 1 of 3) CpG 400 NM_001300 1316 Hs.4055 NM_001300 HPRD:03632 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel-like factor 6 protein-coding 0.106036 0.672638 47(CCGCTCCCCCGG,+,0.00) 311(GGCGGCGA,-,0.00) -37(TCGGCCGG,-,0.00),25(TCGATCGG,-,0.00) 31(GGCGGGGG,+,0.00),398(CGCCCGGC,-,0.00) -50(TCGTGCCA,+,0.00),277(TCGGGCCG,+,0.00) 169(TTTACCTG,-,0.00) 329(GGGAGCCGGAGC,+,0.00),335(CGGAGCCGAAAG,+,0.00) -69(GCGGGGACAGGC,+,0.00),39(CGCTGCGCCCGC,-,0.00),72(CCCAGGCCCAGC,-,0.00) 122(GACCCGGCCC,-,0.00),279(GGGCCGGGTT,+,0.00) 206(CCGAGAAG,-,0.00) 312(GCGGCGAGGC,+,0.00) -37(TCGGCCGGGCTG,+,0.00) 561_WT_peak_5251 chr3 129033969 129034214 + 61 NA 3' UTR (NM_006026, exon 1 of 1) 3' UTR (NM_006026, exon 1 of 1) -1023 NR_026991 339942 Hs.450096 NM_001025468 H1FX-AS1 C3orf47 H1FX antisense RNA 1 ncRNA 0.093878 0.658537 7(CTTGGCCGCC,-,0.00) -42(CCGGCCGA,+,0.00) 32(CCCCCGGC,-,0.00) -38(CCGACACG,-,0.00) -136(GCCTCGCGGC,-,0.00),6(GCTTGGCCGC,-,0.00) 561_WT_peak_1667 chr12 46662638 46662831 + 61 NA promoter-TSS (NM_001278390) promoter-TSS (NM_001278390) 474 NM_001278387 81539 Hs.533770 NM_030674 HPRD:12245 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38, member 1 protein-coding 0.098446 0.623711 -127(CGAATCGGAGTC,+,0.00) 561_WT_peak_4904 chr22 37518533 37518702 + 61 NA Intergenic MIRc|SINE|MIR -13014 NM_001289000 164656 Hs.370885 NM_153609 HPRD:10270 TMPRSS6 IRIDA transmembrane protease, serine 6 protein-coding 0.023669 0.558824 561_WT_peak_5945 chr5 137911463 137911680 + 61 NA promoter-TSS (NM_004134) promoter-TSS (NM_004134) -253 NM_004134 3313 Hs.184233 NM_004134 HPRD:02770 HSPA9 CSA|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74 heat shock 70kDa protein 9 (mortalin) protein-coding 0.087558 0.642202 -30(GGCGTGGA,-,0.00) 561_WT_peak_1000 chr10 60144965 60145364 + 61 NA non-coding (NR_073073, exon 1 of 8) non-coding (NR_073073, exon 1 of 8) 261 NM_001270782 7019 Hs.594250 NM_003201 HPRD:02702 TFAM MTTF1|MTTFA|TCF6|TCF6L1|TCF6L2|TCF6L3 transcription factor A, mitochondrial protein-coding 0.090226 0.650000 -160(GGCGGCCGGG,+,0.00) -145(AGGTGGCT,+,0.00) -163(CCGGGCGGCCGG,-,0.00) -124(TCGAAGCC,+,0.00) 86(CGCACGCG,-,0.00) 16(CCGACCGG,+,0.00) 47(CCTCGCTA,+,0.00) -47(GCCGCCCA,+,0.00) -11(AATTCCGCCC,-,0.00) -129(CCGCCTCG,-,0.00) -54(CCGCAAGGCCGC,-,0.00) 561_WT_peak_3228 chr17 46588550 46588728 + 61 NA Intergenic Intergenic 19633 NM_002144 3211 Hs.99992 NM_002144 HOXB1 HCFP3|HOX2|HOX2I|Hox-2.9 homeobox B1 protein-coding 0.011236 0.296089 561_WT_peak_5 chr1 948736 949108 + 61 NA promoter-TSS (NM_005101) promoter-TSS (NM_005101) 75 NM_005101 9636 Hs.458485 NM_005101 HPRD:00958 ISG15 G1P2|IFI15|IP17|UCRP|hUCRP ISG15 ubiquitin-like modifier protein-coding 0.043011 0.627346 -23(GGCGGCTGAG,+,0.00) -86(CGGCACGC,-,0.00),20(TTGTGCCG,+,0.00) -21(CGGCTGAGAGGC,-,0.00) -19(GCTGAGAGGC,+,0.00) 561_WT_peak_1988 chr13 33479220 33479495 + 61 NA intron (NR_047020, intron 3 of 4) MLT1L|LTR|ERVL-MaLR 6433 NR_047020 100874167 Hs.406290 NR_047020 LINC00423 - long intergenic non-protein coding RNA 423 ncRNA 0.003636 0.434783 561_WT_peak_5508 chr4 77997371 77997569 + 61 NA promoter-TSS (NM_006835) promoter-TSS (NM_006835) -345 NM_006835 10983 Hs.518827 NM_006835 HPRD:16690 CCNI CCNI1|CYC1|CYI cyclin I protein-coding 0.095960 0.643216 -6(AGCGGCCGAG,+,0.00) -13(AGAAAGAAGCGG,+,0.00) -164(CGTGGCTA,+,0.00) -120(AGGAGCGGAAGG,+,0.00) -33(GCTGCGCA,+,0.00) 561_WT_peak_2773 chr16 30064330 30064500 + 61 NA promoter-TSS (NM_000034) promoter-TSS (NM_000034) 4 NM_000034 226 Hs.513490 NM_000034 HPRD:00070 ALDOA ALDA|GSD12|HEL-S-87p aldolase A, fructose-bisphosphate protein-coding 0.100000 0.666667 -100(CTCGGCAGCC,-,0.00) -42(AACGGCTT,-,0.00) -46(CGCGAACG,+,0.00) -18(CCTCGGAC,+,0.00) -125(CGAGGCGG,+,0.00) 561_WT_peak_1291 chr11 57479460 57479654 + 61 NA promoter-TSS (NR_026593) promoter-TSS (NR_026593) 116 NM_153450 219541 Hs.43619 NM_153450 HPRD:17477 MED19 DT2P1G7|LCMR1 mediator complex subunit 19 protein-coding 0.092784 0.717949 -88(CCCCCGCC,-,0.00),-67(GGCGGGGG,+,0.00) -99(CCGTGCCG,+,0.00) -45(GTCCGAAG,-,0.00) 561_WT_peak_997 chr10 52432009 52432172 + 61 NA Intergenic MER101|LTR|ERV1 -48353 NM_147156 259230 Hs.654698 NM_147156 HPRD:18203 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding 0.000000 0.445122 -111(AAGTGGCT,+,0.00) -43(TTTACCCT,-,0.00) 561_WT_peak_3914 chr19 57874570 57874869 + 61 NA promoter-TSS (NR_002166) promoter-TSS (NR_002166) -160 NR_002166 10597 Hs.446620 NR_002166 ENSG00000256060 TRAPPC2P1 MIP-2A|SEDLP|SEDLP1 trafficking protein particle complex 2 pseudogene 1 pseudo 0.086957 0.570000 44(GTAGGAGGGCGG,-,0.00) -83(GGTGTCGA,-,0.00) 70(TCTTGCCG,+,0.00) 561_WT_peak_4012 chr2 29237702 29238028 + 61 NA intron (NM_199280, intron 8 of 19) intron (NM_199280, intron 8 of 19) 33701 NM_199280 165186 Hs.525977 NM_199280 HPRD:14110 FAM179A - family with sequence similarity 179, member A protein-coding 0.027607 0.544343 -158(GGAGGACGGGGA,-,0.00) 561_WT_peak_1332 chr11 64071898 64072105 + 61 NA promoter-TSS (NM_001282451) promoter-TSS (NM_001282451) -999 NM_001282451 2101 Hs.110849 NM_004451 HPRD:07210 ESRRA ERR1|ERRa|ERRalpha|ESRL1|NR3B1 estrogen-related receptor alpha protein-coding 0.062802 0.605769 -62(CTGCCCTCCTCC,+,0.00) 561_WT_peak_206 chr1 43397826 43398121 + 61 NA intron (NM_006516, intron 2 of 9) intron (NM_006516, intron 2 of 9) -26747 NR_033967 440584 Hs.260928 NR_033967 ENSG00000227533 SLC2A1-AS1 - SLC2A1 antisense RNA 1 ncRNA 0.023729 0.614865 96(AAACGGCT,+,0.00),97(AACGGCTT,-,0.00) 561_WT_peak_1508 chr11 120119457 120119627 + 61 NA TTS (NR_038829) TTS (NR_038829) 8639 NM_014352 25833 Hs.227115 NM_014352 HPRD:09582 POU2F3 Epoc-1|OCT-11|OCT11|OTF-11|PLA-1|PLA1|Skn-1a POU class 2 homeobox 3 protein-coding 0.005882 0.374269 -161(AGGTGGCT,+,0.00) 561_WT_peak_3575 chr19 3155119 3155398 + 61 NA promoter-TSS (NR_110670) promoter-TSS (NR_110670) -85 NR_110670 100996351 NR_110670 ENSG00000267551 LOC100996351 - uncharacterized LOC100996351 ncRNA 0.032258 0.575000 -85(AAGCCTCT,+,0.00) 561_WT_peak_848 chr10 3826320 3826456 + 61 NA intron (NM_001300, intron 1 of 3) intron (NM_001300, intron 1 of 3) 1085 NM_001300 1316 Hs.4055 NM_001300 HPRD:03632 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel-like factor 6 protein-coding 0.051471 0.518248 561_WT_peak_1560 chr12 6579459 6579611 + 61 NA intron (NM_001297438, intron 1 of 4) intron (NM_001297438, intron 1 of 4) 530 NM_014231 6843 Hs.20021 NM_014231 HPRD:01716 VAMP1 SPAX1|SYB1|VAMP-1 vesicle-associated membrane protein 1 (synaptobrevin 1) protein-coding 0.078947 0.712418 -67(CGGTCCGGAAGC,+,0.00) -143(CCCCTGCCCCGC,-,0.00),-94(TGCTGGCCCCCC,-,0.00) 561_WT_peak_1993 chr13 37573644 37573806 + 61 NA promoter-TSS (NM_013338) promoter-TSS (NM_013338) -221 NM_013338 29880 Hs.507769 NM_013338 HPRD:05193 ALG5 bA421P11.2 ALG5, dolichyl-phosphate beta-glucosyltransferase protein-coding 0.012346 0.294479 -89(AGCCACAT,-,0.00) 561_WT_peak_2328 chr14 90864939 90865082 + 61 NA intron (NM_006888, intron 1 of 5) intron (NM_006888, intron 1 of 5) 1683 NM_006888 801 Hs.282410 NM_006888 HPRD:00241 CALM1 CALML2|CAMI|CPVT4|DD132|PHKD|caM calmodulin 1 (phosphorylase kinase, delta) protein-coding 0.034965 0.541667 -69(TAGCGAGG,-,0.00) 561_WT_peak_1143 chr10 112155625 112155795 + 61 NA Intergenic Intergenic -91003 NM_005871 10285 Hs.632093 NM_005871 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding 0.011765 0.479532 561_WT_peak_3159 chr17 37910360 37910545 + 61 NA Intergenic CpG 14232 NM_001242443 2886 Hs.86859 NM_005310 HPRD:03311 GRB7 - growth factor receptor-bound protein 7 protein-coding 0.135135 0.741935 -42(CGCGGAGCCTCC,+,0.00) -106(CGAGGCGG,+,0.00),-45(CGTCGCGG,+,0.00) -127(GCCTCGCTGC,-,0.00) -130(CGGGCCTCGCTG,+,0.00) 561_WT_peak_5694 chr5 38453750 38453938 + 61 NA intron (NM_182798, intron 14 of 16) intron (NM_182798, intron 14 of 16) 8266 NM_182801 133584 Hs.20103 NM_152403 HPRD:13433 EGFLAM AGRINL|AGRNL|PIKA EGF-like, fibronectin type III and laminin G domains protein-coding 0.010638 0.492063 561_WT_peak_3393 chr17 80023714 80023922 + 61 NA promoter-TSS (NM_022156) promoter-TSS (NM_022156) -121 NM_022156 64118 Hs.514599 NM_022156 DUS1L DUS1|PP3111 dihydrouridine synthase 1-like (S. cerevisiae) protein-coding 0.139423 0.712919 -108(GGCGACGA,-,0.00) -56(CGTACCCG,-,0.00) -128(CGCCCGGC,-,0.00) -42(CGTGGCTA,+,0.00) -132(ACCGCGCC,+,0.00) -89(GCGGGGTCGGAG,+,0.00) -126(CCCGGCTCCGAG,-,0.00) 561_WT_peak_2343 chr14 93650898 93651129 + 61 NA promoter-TSS (NM_001098621) promoter-TSS (NM_001098621) 236 NM_022151 64112 Hs.24719 NM_022151 HPRD:17580 MOAP1 MAP-1|PNMA4 modulator of apoptosis 1 protein-coding 0.103896 0.698276 -124(GGCGGCCAAG,+,0.00) -138(CGCGTCCG,+,0.00) -41(GCGACCGA,+,0.00) -145(TCGTGCCC,+,0.00) 52(GCTGAGGAGC,+,0.00) 561_WT_peak_6146-2 chr6 26125775 26125847 + 61 NA TTS (NM_003512) TTS (NM_003512) 1438 NM_003512 8334 Hs.484950 NM_003512 HPRD:09104 HIST1H2AC H2A/l|H2AFL|dJ221C16.4 histone cluster 1, H2ac protein-coding 0.041667 0.575342 -155(TCGTGCCA,+,0.00) 561_WT_peak_4558 chr20 5591476 5591782 + 61 NA promoter-TSS (NM_019593) promoter-TSS (NM_019593) 43 NM_019593 56261 Hs.636359 NM_019593 HPRD:10025 GPCPD1 GDE5|GDPD6|PREI4 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) protein-coding 0.153595 0.781759 56(GCCGGAGGGCGG,-,0.00) -123(TCGCCGCC,+,0.00),-27(GGCGTCGA,-,0.00) -78(GGGCGCCCGCCG,+,0.00) 118(CGCGTGCG,+,0.00) -112(CCGCCCGA,+,0.00) 88(CGCCCGGC,-,0.00) -18(CGGCAGGA,-,0.00) 51(GCGGGGCCGGAG,+,0.00) -135(CGCAGGTCCGCG,-,0.00) -128(CCGCGTCG,-,0.00) -126(GCGTCGCCGC,-,0.00) -39(GCGGCCTGCCGC,+,0.00),31(CTGCCAGGCCAC,-,0.00) 561_WT_peak_4645 chr20 43594785 43595008 + 61 NA promoter-TSS (NM_006282) promoter-TSS (NM_006282) 203 NR_038341 100505826 Hs.196065 NR_038341 ENSG00000227477 STK4-AS1 - STK4 antisense RNA 1 (head to head) ncRNA 0.062780 0.571429 561_WT_peak_3433 chr18 10787518 10787717 + 61 NA intron (NM_022068, intron 15 of 51) intron (NM_022068, intron 15 of 51) 125687 NR_110777 101927410 Hs.436902 NR_110777 ENSG00000260779 LOC101927410 - uncharacterized LOC101927410 ncRNA 0.010050 0.350000 561_WT_peak_2339 chr14 92588269 92588498 + 61 NA promoter-TSS (NM_004545) promoter-TSS (NM_004545) 85 NM_017437 53981 Hs.657632 NM_017437 HPRD:05824 CPSF2 CPSF100 cleavage and polyadenylation specific factor 2, 100kDa protein-coding 0.074236 0.652174 -100(TGGCGGCT,+,0.00) -124(CGCCGCTA,+,0.00) -62(CCCTGGCGCTGC,-,0.00) 561_WT_peak_2012 chr13 42032474 42032669 + 61 NA exon (NM_014059, exon 2 of 5) exon (NM_014059, exon 2 of 5) 1029 NM_014059 28984 Hs.507866 NM_014059 HPRD:17970 RGCC C13orf15|RGC-32|RGC32|bA157L14.2 regulator of cell cycle protein-coding 0.117949 0.678571 -53(AGCGGCTT,-,0.00) -42(CGACTCGG,+,0.00) -84(GCGGCGCAGC,+,0.00),-84(GCGGCGCAGC,-,0.00) 561_WT_peak_5155 chr3 71632435 71632643 + 61 NA intron (NM_001012505, intron 1 of 6) CpG-18683 365 NM_001244808 27086 Hs.59368 NM_032682 HPRD:18518 FOXP1 12CC4|QRF1|hFKH1B forkhead box P1 protein-coding 0.057692 0.574163 -100(GGCCTCGA,-,0.00) -137(GCGCGCCGGCCC,+,0.00) 561_WT_peak_1481 chr11 110166447 110166698 + 61 NA intron (NM_001260492, intron 1 of 15) CpG 865 NM_001260495 5962 Hs.263671 NM_002906 HPRD:01534 RDX DFNB24 radixin protein-coding 0.063745 0.607143 -111(AGCGGCCT,-,0.00) -37(ACCGCGGCCC,-,0.00) -34(GCGGCCCTGGCC,+,0.00) 561_WT_peak_4896 chr22 36558339 36558461 + 61 NA intron (NM_145641, intron 1 of 4) LTR43B|LTR|ERV1 -1423 NR_027834 80833 Hs.474737 NM_014349 HPRD:06264 APOL3 APOLIII|CG121 apolipoprotein L, 3 protein-coding 0.000000 0.422764 561_WT_peak_6773 chr7 99815550 99815780 + 61 NA intron (NR_028038, intron 5 of 6) LTR13|LTR|ERVK -1206 NM_024070 79037 Hs.729356 NM_024070 ENSG00000213413 PVRIG C7orf15 poliovirus receptor related immunoglobulin domain containing protein-coding 0.021739 0.593074 561_WT_peak_2657 chr16 2317898 2318104 + 61 NA promoter-TSS (NM_006711) promoter-TSS (NM_006711) -114 NM_006711 10921 Hs.355643 NM_006711 HPRD:07341 RNPS1 E5.1 RNA binding protein S1, serine-rich domain protein-coding 0.106796 0.714976 -89(TGGACCGGCTTC,+,0.00) 27(CTCAGCCGCC,-,0.00) -69(TCCTGCCG,+,0.00) -145(CTTCTCGG,+,0.00) 31(GCCGCCGAGGCC,+,0.00) -125(GCTGCCAGGC,+,0.00) -124(CTGCCAGGCCAC,-,0.00) 561_WT_peak_6402 chr6 91296961 91297145 + 61 NA promoter-TSS (NM_003188) promoter-TSS (NM_003188) -33 NM_003188 6885 Hs.594838 NM_003188 HPRD:04011 MAP3K7 MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding 0.086957 0.508108 -85(CGCGAACG,+,0.00) 561_WT_peak_3328 chr17 66509171 66509325 + 61 NA intron (NM_212472, intron 1 of 10) intron (NM_212472, intron 1 of 10) 728 NM_212472 5573 Hs.280342 NM_002734 HPRD:01786 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase, cAMP-dependent, regulatory, type I, alpha protein-coding 0.045455 0.567742 561_WT_peak_3369 chr17 76813145 76813526 + 61 NA intron (NM_025090, intron 10 of 19) Tigger3a|DNA|TcMar-Tigger 23634 NM_025090 57602 Hs.464243 NM_025090 HPRD:07164 USP36 DUB1 ubiquitin specific peptidase 36 protein-coding 0.013123 0.458115 561_WT_peak_4706 chr20 57225979 57226351 + 61 NA promoter-TSS (NM_001204868) promoter-TSS (NM_001204868) -144 NR_037943 8675 Hs.307913 NM_003763 HPRD:04718 STX16 SYN16 syntaxin 16 protein-coding 0.080645 0.694370 -11(GGCGCCCGAG,+,0.00) -18(GAAACAGGGCGC,+,0.00) -148(GCCGCGCA,+,0.00) -114(GGCCCTGGCAGC,-,0.00) 561_WT_peak_2360 chr14 100532640 100532821 + 61 NA intron (NM_016337, intron 1 of 13) MIRc|SINE|MIR 979 NM_016337 51466 Hs.125867 NM_016337 HPRD:10942 EVL RNB6 Enah/Vasp-like protein-coding 0.038674 0.510989 561_WT_peak_6767 chr7 99516736 99517161 + 61 NA exon (NM_033017, exon 1 of 7) exon (NM_033017, exon 1 of 7) 275 NM_033017 89122 Hs.50749 NM_033017 HPRD:15556 TRIM4 RNF87 tripartite motif containing 4 protein-coding 0.110588 0.706573 54(GACACCGGGTCC,-,0.00) -48(GGCGCCGA,-,0.00) -5(CGCCCGGC,-,0.00),191(GCCGCGGG,+,0.00) 150(GTCCGACG,-,0.00) -49(GGGCGCCGATGG,+,0.00) -108(CGCCGGCGCTGC,-,0.00),-56(GCGCGGCGGGCG,+,0.00) -74(GGGCCCAGTT,+,0.00) 561_WT_peak_1820 chr12 98909036 98909224 + 61 NA promoter-TSS (NM_003276) promoter-TSS (NM_003276) -221 NM_001032284 7112 Hs.11355 NM_003276 HPRD:01777 TMPO CMD1T|LAP2|LEMD4|PRO0868|TP thymopoietin protein-coding 0.090426 0.603175 -149(GGCGTGGA,-,0.00),-120(TCGACCCC,+,0.00),-36(GGCGTCTA,-,0.00) -135(CGCGTTCG,+,0.00),-129(CGTAGGCG,-,0.00) 3(CGGGCCGGGA,-,0.00) 13(GCCTCGGCTCCC,-,0.00) 561_WT_peak_7458 chr9 132648491 132648765 + 61 NA TTS (NM_015033) TTS (NM_015033) 16744 NR_106914 102466750 NR_106914 MIR6855 hsa-mir-6855 microRNA 6855 ncRNA 0.029197 0.549091 -153(CCGTCTCCGCCC,+,0.00) 561_WT_peak_4214 chr2 96971092 96971299 + 61 NA 5' UTR (NM_014014, exon 1 of 45) 5' UTR (NM_014014, exon 1 of 45) 112 NM_014014 23020 Hs.246112 NM_014014 HPRD:03391 SNRNP200 ASCC3L1|BRR2|HELIC2|RP33|U5-200KD small nuclear ribonucleoprotein 200kDa (U5) protein-coding 0.096618 0.620192 4(CGGAACGA,-,0.00) -3(GCCGCGCC,+,0.00) -77(CGCGGCTGCTCG,-,0.00) -88(TCCGCCATGGCC,+,0.00),-86(CGCCATGGCCGC,-,0.00) 561_WT_peak_2472 chr15 48623689 48623931 + 61 NA promoter-TSS (NM_001948) promoter-TSS (NM_001948) 189 NM_001025248 1854 Hs.527980 NM_001948 HPRD:03165 DUT dUTPase deoxyuridine triphosphatase protein-coding 0.115702 0.699588 -29(CTCTCCGGGCCA,-,0.00) -8(CTCGGCCGCG,-,0.00) -16(GCCCGCCCCT,+,0.00) -4(GCCGCGCC,+,0.00),1(GCCGCGCA,+,0.00) -126(CCCTCGCCCCGC,-,0.00) 1(GCCGCGCAGC,-,0.00),59(GCCGCGGAGC,+,0.00) 561_WT_peak_6083 chr6 3259128 3259420 + 61 NA exon (NM_001135750, exon 1 of 2) exon (NM_001135750, exon 1 of 2) 112 NM_001128592 389362 Hs.207069 NM_001128591 ENSG00000180822 PSMG4 C6orf86|PAC4|bA506K6.2 proteasome (prosome, macropain) assembly chaperone 4 protein-coding 0.116438 0.723549 -156(CCTTCCGGGGCC,-,0.00),-150(GGGGCCGAAAGC,+,0.00) 55(ATGCGGCT,+,0.00) -19(TCGCCGCC,+,0.00) -70(GGTCTGGCGCTG,-,0.00) -58(TGGGCCGGGA,-,0.00) -163(CCCCCGCC,-,0.00) -52(GGGAGCCGTGGG,+,0.00) 112(CTCGCCGTGGCC,+,0.00) 561_WT_peak_2405 chr15 22509153 22509385 + 61 NA Intergenic Intergenic -37296 NR_033735 646396 Hs.451294 NR_033735 REREP3 - arginine-glutamic acid dipeptide (RE) repeats pseudogene 3 pseudo 0.012931 0.442060 -48(CAAAACCA,+,0.00) -63(AAAACAGGAAAC,+,0.00) 52(CAGGCAGGCCTC,-,0.00) 561_WT_peak_4436 chr2 201981196 201981573 + 61 NA intron (NM_001202517, intron 1 of 8) CpG 507 NM_001127184 8837 Hs.390736 NM_003879 HPRD:04671 CFLAR CASH|CASP8AP1|CLARP|Casper|FLAME|FLAME-1|FLAME1|FLIP|I-FLICE|MRIT|c-FLIP|c-FLIPL|c-FLIPR|c-FLIPS CASP8 and FADD-like apoptosis regulator protein-coding 0.111406 0.703704 167(CGCCCCGGATTC,+,0.00) -140(TCGACCCC,+,0.00),-94(CCGACGCC,+,0.00) -89(GCCCGGCCCT,+,0.00) -90(CGCCCGGC,-,0.00),33(GGCGGGGG,+,0.00),126(CGCCCGGC,-,0.00) -22(TCCTCACAGCCC,+,0.00) 59(CAGTTTTG,-,0.00) 153(TCTACCCG,-,0.00) -51(GCCGCGCC,+,0.00) -130(CGCTGGCGGCGC,-,0.00),-125(GCGGCGCCGGAG,+,0.00) 162(AACTCCGCCC,-,0.00) -56(GCGCCGCCGC,-,0.00) 561_WT_peak_6146 chr6 26125569 26125655 + 61 NA TTS (NM_003512) TTS (NM_003512) 1239 NM_003512 8334 Hs.484950 NM_003512 HPRD:09104 HIST1H2AC H2A/l|H2AFL|dJ221C16.4 histone cluster 1, H2ac protein-coding 0.034884 0.563218 -153(GGAGGCCGAG,+,0.00) 561_WT_peak_2886 chr16 70148189 70148496 + 60 NA 5' UTR (NM_017990, exon 1 of 19) 5' UTR (NM_017990, exon 1 of 19) 813 NM_017990 55066 Hs.744043 NM_017990 HPRD:17832 PDPR PDP3 pyruvate dehydrogenase phosphatase regulatory subunit protein-coding 0.104235 0.698052 -104(CTTTCCGGCCCG,-,0.00) 26(CGTCCGCG,-,0.00) -96(CCCGCGGC,-,0.00) -139(GCTTCGCCCC,-,0.00) 561_WT_peak_5012 chr3 14166226 14166464 + 60 NA promoter-TSS (NM_024334) promoter-TSS (NM_024334) 26 NM_001098502 131474 Hs.517815 NM_144636 HPRD:13045 CHCHD4 MIA40|TIMM40 coiled-coil-helix-coiled-coil-helix domain containing 4 protein-coding 0.105042 0.682008 -64(TCGGCGCC,+,0.00) -95(CCCTCCCAGGCC,+,0.00) 37(TTTCCCCG,-,0.00) -107(CGCGGACCCGCC,+,0.00) 561_WT_peak_6505 chr6 144904468 144904853 + 60 NA intron (NM_007124, intron 50 of 73) intron (NM_007124, intron 50 of 73) 291787 NM_007124 7402 Hs.133135 NM_007124 HPRD:00547 UTRN DMDL|DRP|DRP1 utrophin protein-coding 0.018182 0.417098 -27(AGGTGTCT,+,0.00) 40(TGGTTTTG,-,0.00) 561_WT_peak_1337 chr11 64781184 64781357 + 60 NA promoter-TSS (NM_001199745) promoter-TSS (NM_001199745) -315 NM_001667 402 Hs.502836 NM_001667 HPRD:11869 ARL2 ARFL2 ADP-ribosylation factor-like 2 protein-coding 0.034682 0.614943 -13(GTCAGACG,-,0.00) 561_WT_peak_3637 chr19 12902281 12902551 + 60 NA 5' UTR (NM_002229, exon 1 of 1) 5' UTR (NM_002229, exon 1 of 1) 106 NM_002229 3726 Hs.25292 NM_002229 HPRD:01303 JUNB AP-1 jun B proto-oncogene protein-coding 0.107407 0.730627 -85(ACGACGCC,+,0.00) 11(CCGCGCCAGCCC,+,0.00) 95(GGAGCGGCCC,-,0.00) 83(GCAGCGAGGC,+,0.00) -9(GCCGGCTGGCTG,+,0.00),84(CAGCGAGGCCCG,-,0.00) 561_WT_peak_6389 chr6 88451868 88452251 + 60 NA Intergenic MLT1F1|LTR|ERVL-MaLR -40074 NM_018064 55122 Hs.485915 NM_018064 HPRD:12864 AKIRIN2 C6orf166|FBI1|dJ486L4.2 akirin 2 protein-coding 0.007833 0.500000 -123(AGCCACTT,-,0.00) 24(TAAACAGGAAAC,+,0.00) 561_WT_peak_4998 chr3 9438512 9439026 + 60 NA promoter-TSS (NM_001080517) promoter-TSS (NM_001080517) 405 NR_027007 440944 Hs.598958 NM_001013713 ENSG00000206573 THUMPD3-AS1 SETD5-AS1 THUMPD3 antisense RNA 1 ncRNA 0.089494 0.642718 161(CTAGCCGGAAGC,+,0.00) -70(AGCCGATT,-,0.00),47(AAGCGGCT,+,0.00) 262(CCTCCCTCCCGC,+,0.00) -146(GGTGTCGA,-,0.00) 40(AGTCGCTA,+,0.00) 205(CGGTTTCG,-,0.00) -124(CGGGTAAA,+,0.00) -29(GCCGCGCC,+,0.00) -34(GGCCGGCCGCGC,-,0.00) -71(GAGCCGATTT,+,0.00) 561_WT_peak_2033 chr13 46756094 46756389 + 60 NA intron (NM_002298, intron 1 of 15) intron (NM_002298, intron 1 of 15) 218 NM_002298 3936 Hs.381099 NM_002298 HPRD:01082 LCP1 CP64|HEL-S-37|L-PLASTIN|LC64P|LPL|PLS2 lymphocyte cytosolic protein 1 (L-plastin) protein-coding 0.006780 0.476351 -93(CAAAACCC,+,0.00) 561_WT_peak_6350 chr6 52930246 52930588 + 60 NA 5' UTR (NM_033480, exon 1 of 13) 5' UTR (NM_033480, exon 1 of 13) 160 NM_033480 26268 Hs.216653 NM_012347 HPRD:16434 FBXO9 FBX9|NY-REN-57|VCIA1|dJ341E18.2 F-box protein 9 protein-coding 0.111111 0.734694 -72(CCGAGTCCCCGG,+,0.00) -136(GGGCTGACGCTC,-,0.00) -2(CGTACGCC,-,0.00) 42(CCGACCGA,+,0.00) -109(CCCCCGCC,-,0.00) -26(CCCCTGCCCCGC,-,0.00),2(CGCCGGGCCCGC,-,0.00) -106(CCGCCTCG,-,0.00),-18(CCGCGAAG,-,0.00) 62(GCTCCGCTGC,-,0.00) 561_WT_peak_4174 chr2 86114840 86115024 + 60 NA intron (NM_003896, intron 1 of 6) intron (NM_003896, intron 1 of 6) 1225 NM_003896 8869 Hs.415117 NM_003896 HPRD:05098 ST3GAL5 SATI|SIAT9|SIATGM3S|ST3GalV ST3 beta-galactoside alpha-2,3-sialyltransferase 5 protein-coding 0.027174 0.567568 561_WT_peak_6842 chr7 130598296 130598567 + 60 NA promoter-TSS (NR_034120) promoter-TSS (NR_034120) 208 NR_109780 100506860 Hs.635013 NR_109780 LOC100506860 - uncharacterized LOC100506860 ncRNA 0.025830 0.459559 561_WT_peak_7023 chr8 54934982 54935195 + 60 NA promoter-TSS (NM_201437) promoter-TSS (NM_201437) -72 NR_109901 6917 Hs.491745 NM_006756 HPRD:03252 TCEA1 GTF2S|SII|TCEA|TF2S|TFIIS transcription elongation factor A (SII), 1 protein-coding 0.089202 0.621495 -147(GCTTCCGGCTAG,-,0.00),-70(GTTTTCGGCCCC,-,0.00) -117(CGGTTTTG,-,0.00) -76(GGGCGGGTTT,+,0.00) 561_WT_peak_5902 chr5 131746807 131746997 + 60 NA intron (NR_045116, intron 1 of 3) intron (NR_045116, intron 1 of 3) 437 NR_045116 441108 Hs.658288 NM_001013717 HPRD:18460 C5orf56 - chromosome 5 open reading frame 56 ncRNA 0.057895 0.685864 -139(CCGTGGGGGCGG,-,0.00) -21(GGGGTCGA,-,0.00) -133(GGGCGGGGAGGG,-,0.00) 561_WT_peak_1955 chr13 24825705 24825968 + 60 NA intron (NM_001286792, intron 5 of 14) intron (NM_001286792, intron 5 of 14) 2741 NR_046531 100874231 Hs.577998 NR_046531 ENSG00000227213 SPATA13-AS1 - SPATA13 antisense RNA 1 ncRNA 0.045627 0.590909 48(GGTTCCGGCCCT,-,0.00) -104(GGCTTCGA,-,0.00) 50(TTCCGGCCCT,+,0.00) -2(GCCGCCCA,+,0.00) -9(CTTCCAGGCCGC,-,0.00) 561_WT_peak_6370 chr6 74171615 74171888 + 60 NA exon (NM_012123, exon 1 of 12) exon (NM_012123, exon 1 of 12) 297 NM_133645 25821 Hs.347614 NM_012123 HPRD:17611 MTO1 COXPD10 mitochondrial tRNA translation optimization 1 protein-coding 0.098901 0.645985 -110(CGCCCCGGACTC,+,0.00) 69(CCGCCTCCCCCG,+,0.00) 45(CGTAGGAC,+,0.00) -115(CGCGGCGCCCCG,+,0.00),-115(CGCGGCGCCCCG,-,0.00) 561_WT_peak_1329 chr11 63753338 63753509 + 60 NA promoter-TSS (NM_017670) promoter-TSS (NM_017670) 98 NM_017670 55611 Hs.473788 NM_017670 OTUB1 OTB1|OTU1 OTU deubiquitinase, ubiquitin aldehyde binding 1 protein-coding 0.070175 0.662791 -112(CAAAGCCG,+,0.00) -41(ACTTCCTGTCTC,-,0.00) -72(TGGGGCTCCGCG,-,0.00) 561_WT_peak_1689 chr12 49659284 49659469 + 60 NA intron (NM_032704, intron 1 of 3) intron (NM_032704, intron 1 of 3) 511 NM_032704 84790 Hs.652390 NM_032704 HPRD:06747 TUBA1C TUBA6|bcm948 tubulin, alpha 1c protein-coding 0.054054 0.618280 -95(GGCCCCGGAGGC,+,0.00) -128(AGCGACCT,-,0.00) 1(GCCCTGCCCT,+,0.00) -100(AACTGGGCCC,-,0.00) 561_WT_peak_4254 chr2 111878673 111879094 + 60 NA intron (NM_207002, intron 1 of 3) CpG-15379 392 NM_001204111 10018 Hs.469658 NM_006538 HPRD:04828 BCL2L11 BAM|BIM|BOD BCL2-like 11 (apoptosis facilitator) protein-coding 0.114014 0.663507 35(AGACGCTT,-,0.00) 212(CCGGGCAGGAGG,-,0.00) -139(TCGGCGCC,+,0.00),46(TCGGCGCC,+,0.00),242(TCGGCGCC,+,0.00) 243(CGGCGCCGGCCC,+,0.00) -6(CGGCACCA,-,0.00) 246(CGCCGGCCCGGG,-,0.00) -144(CCGCCTCG,-,0.00) 561_WT_peak_5236 chr3 124860584 124860902 + 60 NA intron (NM_024628, intron 5 of 13) CpG 9653 NR_049815 100847039 NR_049815 MIR5092 - microRNA 5092 ncRNA 0.100629 0.689655 81(GGCCCCGGAGAC,+,0.00) 21(AGGCCGCT,+,0.00) 49(ACGACGCC,+,0.00),62(GGCGTCGG,-,0.00) 128(CGCGCACG,+,0.00) -140(GCGACCGA,+,0.00) 42(CCGCACGA,-,0.00) -28(GGGCTCGGAGGG,-,0.00) -138(GACCGACG,-,0.00) 121(GGCGCGGC,-,0.00) -7(AGCGGCTCTGCG,-,0.00) 101(GCTCCTCAGC,-,0.00) -128(CAGCCAGACAGC,-,0.00) 561_WT_peak_118 chr1 26438391 26438572 + 60 NA intron (NM_152835, intron 1 of 2) CpG 213 NM_152835 149420 Hs.468801 NM_152835 HPRD:15110 PDIK1L CLIK1L|STK35L2 PDLIM1 interacting kinase 1 like protein-coding 0.060773 0.648352 -86(CCTCCCTCCCTG,+,0.00) -130(CGTGGCGG,+,0.00) -113(GCTGCAGAGC,+,0.00) 561_WT_peak_880 chr10 8446955 8446995 + 60 NA Intergenic Intergenic -136707 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA 0.000000 0.341463 561_WT_peak_7232 chr9 21995086 21995397 + 60 NA promoter-TSS (NM_058195) promoter-TSS (NM_058195) 451 NR_047536 100048912 Hs.493614 NR_003529 ENSG00000240498 CDKN2B-AS1 ANRIL|CDKN2B-AS|CDKN2BAS|NCRNA00089|PCAT12|p15AS CDKN2B antisense RNA 1 ncRNA 0.106109 0.682692 -135(GCGCTGGCGCTG,-,0.00),-107(GGCCTGGCGCCG,-,0.00) -100(CGCCGGAC,+,0.00) 40(CGGTTTTA,-,0.00) 81(TCTTCCTCTTTC,-,0.00) -141(GGCGCGGC,-,0.00) -134(CGCTGGCGCTGC,-,0.00) -27(CCGCGTCG,-,0.00) 60(GCCGCGGAGC,+,0.00) -109(CCGGCCTGGCGC,+,0.00),-14(GGCGCCTGGCTG,+,0.00) 561_WT_peak_5164 chr3 93781486 93781692 + 60 NA promoter-TSS (NM_022072) promoter-TSS (NM_022072) 242 NM_176815 200895 Hs.718516 NM_176815 HPRD:11246 DHFRL1 DHFRP4 dihydrofolate reductase-like 1 protein-coding 0.082524 0.584541 17(CCGACCAA,+,0.00) 1(GCCGCCCA,+,0.00) 561_WT_peak_530 chr1 152007486 152007717 + 60 NA intron (NM_005620, intron 1 of 2) intron (NM_005620, intron 1 of 2) 1910 NM_005620 6282 Hs.417004 NM_005620 HPRD:04385 S100A11 HEL-S-43|MLN70|S100C S100 calcium binding protein A11 protein-coding 0.004329 0.409483 561_WT_peak_1429 chr11 82611960 82612049 + 60 NA promoter-TSS (NM_145018) promoter-TSS (NM_145018) -447 NM_005040 5547 Hs.523936 NM_005040 HPRD:08352 PRCP HUMPCP|PCP prolylcarboxypeptidase (angiotensinase C) protein-coding 0.056180 0.466667 561_WT_peak_5820 chr5 75843332 75843533 + 60 NA intron (NM_001285460, intron 1 of 34) intron (NM_001285460, intron 1 of 34) 198 NM_001285460 10788 Hs.291030 NM_006633 HPRD:09253 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding 0.014925 0.405941 561_WT_peak_645 chr1 182585172 182585468 + 60 NA non-coding (NR_036490, exon 1 of 1) non-coding (NR_036490, exon 1 of 1) 1045 NR_036490 284648 Hs.253475 NR_036490 ENSG00000261504 LOC284648 - uncharacterized LOC284648 ncRNA 0.030405 0.521886 63(CTCTGCCGCC,-,0.00) -35(AACCACTT,-,0.00) 74(CTAAACCG,+,0.00) 57(CGCTGGCTCTGC,-,0.00) -62(GCTCCGCAGC,-,0.00) 561_WT_peak_7155 chr8 131080670 131080945 + 60 NA intron (NM_018482, intron 27 of 29) MER21-int|LTR|ERVL 16207 NR_045385 100507117 Hs.106015 NR_045385 ASAP1-IT2 - ASAP1 intronic transcript 2 (non-protein coding) ncRNA 0.010909 0.420290 561_WT_peak_1272 chr11 47236641 47236970 + 60 NA exon (NM_000107, exon 1 of 10) exon (NM_000107, exon 1 of 10) 312 NM_001300734 1643 Hs.700338 NM_000107 HPRD:02886 DDB2 DDBB|UV-DDB2 damage-specific DNA binding protein 2, 48kDa protein-coding 0.060790 0.615152 104(CCCGCGCA,+,0.00) 561_WT_peak_3101 chr17 27944897 27945223 + 60 NA intron (NM_032854, intron 4 of 9) CpG-10388 3381 NM_032854 84940 Hs.143046 NM_032854 HPRD:08607 CORO6 - coronin 6 protein-coding 0.104294 0.718654 -140(CTCCCCGGAGTC,+,0.00) -62(CCGGGAAGGCGC,-,0.00) -78(GGGCGCCAGCCA,+,0.00),-60(GGGAAGGCGCTC,-,0.00),93(GGGCGGGCGCCC,-,0.00) -17(CGCCCGGC,-,0.00) -118(TTTTCCCG,-,0.00) -12(GGCGCGGC,-,0.00) -20(GCGCGCCCGGCG,+,0.00) -128(GCAGCGAGGC,+,0.00) -9(GCGGCCTGGCCT,+,0.00) 561_WT_peak_5639 chr4 170581491 170581568 + 60 NA exon (NM_001243374, exon 1 of 12) exon (NM_001243374, exon 1 of 12) 316 NM_001243374 1182 Hs.481186 NM_001829 HPRD:02785 CLCN3 CLC3|ClC-3 chloride channel, voltage-sensitive 3 protein-coding 0.025974 0.384615 561_WT_peak_4578 chr20 21284043 21284332 + 60 NA intron (NM_012255, intron 1 of 29) CpG 245 NM_012255 22803 Hs.255932 NM_012255 HPRD:10309 XRN2 - 5'-3' exoribonuclease 2 protein-coding 0.110727 0.727586 -25(CTCCGCCGCC,-,0.00) 85(CCGGGGGCGAGG,-,0.00) -56(CCCCCGGC,-,0.00) -52(CGGCACGT,-,0.00) -149(CGCTGGCTCAGC,-,0.00),112(GCGGGGCAAGGG,+,0.00) -26(GCTCCGCCGC,-,0.00) 561_WT_peak_6707 chr7 72649134 72649377 + 60 NA non-coding (NR_003186, exon 7 of 8) non-coding (NR_003186, exon 7 of 8) 14581 NR_003186 654816 Hs.655201 NR_003186 ENSG00000182487 NCF1B NCF-1B|SH3PXD1B neutrophil cytosolic factor 1B pseudogene pseudo 0.119342 0.721311 -100(ACGACGCC,+,0.00),21(GCGACGCC,+,0.00) 19(CAGCGACG,-,0.00) -157(CCTCGGAC,+,0.00) 33(GGCGCGGC,-,0.00) 47(CGCAGAGCCCCG,+,0.00) 26(GCCGCCAGGCGC,+,0.00) 18(GCAGCGACGC,+,0.00) -24(CAGCCAGGACGC,-,0.00),19(CAGCGACGCCGC,-,0.00) 561_WT_peak_2374 chr14 102430954 102431244 + 60 NA exon (NM_001376, exon 1 of 78) exon (NM_001376, exon 1 of 78) 234 NM_001376 1778 Hs.614080 NM_001376 HPRD:02524 DYNC1H1 DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein, cytoplasmic 1, heavy chain 1 protein-coding 0.127586 0.701031 36(GGAGGACGGCGG,-,0.00) -135(CGCGGCCGCC,-,0.00) -68(GGCGGCGA,-,0.00),43(GGCGGCGA,-,0.00) -53(TCGGCCGG,-,0.00) 20(TGGTGCCG,+,0.00) -79(CCGGGGGCGGCG,+,0.00),-73(GCGGCGGCGGCG,+,0.00),53(CGCCGGCCGCGC,-,0.00) -143(CGCTGAGTCGCG,+,0.00) -12(CGTGTCGG,+,0.00) 44(GCGGCGAGGC,+,0.00) 561_WT_peak_7039 chr8 66868035 66868308 + 60 NA Intergenic Intergenic -65620 NM_033105 85479 Hs.491885 NM_033105 HPRD:07474 DNAJC5B CSP-beta DnaJ (Hsp40) homolog, subfamily C, member 5 beta protein-coding 0.014652 0.434307 7(GCAACCATGGCC,+,0.00) 561_WT_peak_3978 chr2 20550781 20551106 + 60 NA promoter-TSS (NM_001282752) promoter-TSS (NM_001282752) -332 NM_015317 23369 Hs.467824 NM_015317 HPRD:09527 PUM2 PUMH2|PUML2 pumilio RNA-binding family member 2 protein-coding 0.092308 0.650307 -132(GGGCTCGCGCTT,-,0.00),93(GTGCTGGCGCCC,-,0.00) -150(CCCCCGCC,-,0.00) -13(CCCTCGGCTTCC,-,0.00) 53(GCCGCCCA,+,0.00) 46(CGCCCGCGCCGC,-,0.00) -111(GCTCCGCCGC,-,0.00) 561_WT_peak_899 chr10 17270263 17270573 + 60 NA 5' UTR (NM_003380, exon 1 of 10) 5' UTR (NM_003380, exon 1 of 10) 160 NM_003380 7431 Hs.455493 NM_003380 HPRD:01899 VIM CTRCT30|HEL113 vimentin protein-coding 0.070968 0.575563 -56(CCGACCGC,+,0.00) 54(CTAAACCG,+,0.00) 91(GGCGCGGT,-,0.00) 561_WT_peak_1868 chr12 113417054 113417218 + 60 NA intron (NM_001032731, intron 1 of 1) intron (NM_001032731, intron 1 of 1) 862 NM_016817 4939 Hs.414332 NM_002535 HPRD:04518 OAS2 - 2'-5'-oligoadenylate synthetase 2, 69/71kDa protein-coding 0.012195 0.563636 -115(GGGAGGAAGGGG,+,0.00) 561_WT_peak_3171 chr17 38478734 38479051 + 60 NA intron (NM_001145301, intron 1 of 8) intron (NM_001145301, intron 1 of 8) 4419 NM_001145301 5914 Hs.654583 NM_000964 RARA NR1B1|RAR retinoic acid receptor, alpha protein-coding 0.031546 0.622642 -94(TCCCGGCCCT,+,0.00) 62(CGGCAGGA,-,0.00) 127(CCCTGTCAGTCC,+,0.00) 561_WT_peak_6901 chr7 150777692 150777869 + 60 NA TTS (NM_031434) TTS (NM_031434) 190 NM_001258461 10922 Hs.647094 NM_006712 HPRD:07368 FASTK FAST Fas-activated serine/threonine kinase protein-coding 0.107345 0.758427 -63(AGGTCGCT,+,0.00) -112(CAGCCCTCCCCG,+,0.00) -52(TCAGTCGG,-,0.00) -18(CCCGCGGC,-,0.00) -76(CCGGGCCCTGCG,+,0.00) -31(GGGCCGGGTT,+,0.00) 561_WT_peak_1850 chr12 110888134 110888475 + 60 NA promoter-TSS (NM_001287222) promoter-TSS (NM_001287222) -88 NM_001287222 10094 Hs.524741 NM_001278556 HPRD:09175 ARPC3 ARC21|p21-Arc actin related protein 2/3 complex, subunit 3, 21kDa protein-coding 0.061584 0.593567 86(TAGTGGCT,+,0.00) 75(AGGGCCGGGC,-,0.00) -136(CGGAAGGGGCGG,+,0.00) 124(CGAGGCGG,+,0.00) 561_WT_peak_995 chr10 52384714 52384979 + 60 NA Intergenic CpG-2841 -1109 NM_147156 259230 Hs.654698 NM_147156 HPRD:18203 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding 0.101887 0.699248 -161(CGCCCGGC,-,0.00),-147(GCCGCGGG,+,0.00),-102(CCCCCGCC,-,0.00) -151(TCGGGCCG,+,0.00) -71(CGCCGGAC,+,0.00) -99(CCGCCACG,-,0.00),-38(CCGCCTCG,-,0.00) -100(CCCGCCACGCCC,+,0.00) 561_WT_peak_6103 chr6 12119428 12119613 + 60 NA intron (NM_002114, intron 3 of 8) LTR45C|LTR|ERV1 106796 NM_002114 3096 Hs.567284 NM_002114 HPRD:01925 HIVEP1 CIRIP|CRYBP1|GAAP|MBP-1|PRDII-BF1|Schnurri-1|ZAS1|ZNF40|ZNF40A human immunodeficiency virus type I enhancer binding protein 1 protein-coding 0.010811 0.483871 561_WT_peak_5818 chr5 75700220 75700450 + 60 NA intron (NM_006633, intron 1 of 35) intron (NM_006633, intron 1 of 35) 1255 NM_006633 10788 Hs.291030 NM_006633 HPRD:09253 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding 0.008696 0.506494 34(TGGTTTTG,-,0.00) 561_WT_peak_5543 chr4 89204895 89205068 + 60 NA intron (NM_152542, intron 1 of 6) CpG 1002 NM_152542 152926 Hs.43744 NM_152542 HPRD:15167 PPM1K BDP|MSUDMV|PP2Ckappa|PP2Cm|PTMP|UG0882E07 protein phosphatase, Mg2+/Mn2+ dependent, 1K protein-coding 0.069364 0.655172 -101(CGCTGGCCCTGA,-,0.00) -39(CCTGCGAAGC,+,0.00) 561_WT_peak_6909 chr7 154720269 154720408 + 60 NA non-coding (NR_024477, exon 1 of 5) non-coding (NR_024477, exon 1 of 5) 111 NR_024476 100132707 Hs.586358 NR_024476 ENSG00000214106 PAXIP1OS PAXIP1-AS2 PAXIP1 opposite strand ncRNA 0.021583 0.450000 -109(CAAAACCT,+,0.00) 561_WT_peak_6697 chr7 66767769 66767943 + 60 NA promoter-TSS (NR_022007) promoter-TSS (NR_022007) 231 NR_040586 64940 Hs.632013 NM_022906 HPRD:07817 STAG3L4 STAG3L4P stromal antigen 3-like 4 (pseudogene) pseudo 0.126437 0.754286 -93(GGCGGCCCAG,+,0.00) -45(CCTCCTTCCCCC,+,0.00) -97(GAGCGGCGGCCC,+,0.00),-56(GAGCGCGGGCCC,+,0.00) -16(CGCACGCG,-,0.00) -83(CGCCCGGC,-,0.00) -47(CCCCTCCTTCCC,-,0.00) -164(GGCGCGGC,-,0.00) 561_WT_peak_2409 chr15 23207003 23207259 + 60 NA intron (NR_003521, intron 1 of 10) intron (NR_003521, intron 1 of 10) 1226 NR_003521 339005 Hs.212670 NR_003521 ENSG00000187667 WHAMMP3 WHAMML1|WHDC1L1 WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3 pseudo 0.007812 0.361868 561_WT_peak_7385 chr9 111696146 111696500 + 60 NA promoter-TSS (NM_017832) promoter-TSS (NM_017832) 285 NM_003640 8518 Hs.494738 NM_003640 HPRD:04763 IKBKAP DYS|ELP1|FD|IKAP|IKI3|TOT1 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein protein-coding 0.098870 0.681690 -58(CGCACGCG,-,0.00) -19(CGGCACTA,-,0.00) -25(CTCCGACG,-,0.00) 130(GGCCGGGCCCGC,-,0.00) 561_WT_peak_4792 chr21 38444874 38445361 + 60 NA promoter-TSS (NM_153681) promoter-TSS (NM_153681) -14 NM_153681 51227 Hs.656565 NM_153681 HPRD:05806 PIGP DCRC|DCRC-S|DSCR5|DSRC phosphatidylinositol glycan anchor biosynthesis, class P protein-coding 0.108830 0.711066 253(CTCGGCCACC,-,0.00) -96(CCGCCTCCCGCG,+,0.00),-70(CCGCGCCCCCGC,+,0.00) -37(AGGCTGGCGCGC,-,0.00) -121(CGGGTACG,+,0.00) 4(AGGGCAGGGA,-,0.00),78(AGGGCAGGGA,-,0.00) -125(GCCGCGGG,+,0.00),-112(CCCCCGCC,-,0.00),-65(CCCCCGCC,-,0.00) 5(GGGCAGGGAGGG,-,0.00) -101(CAGAACCG,+,0.00) 296(GGGAGCCGCAGT,+,0.00) -107(GCCGCGCA,+,0.00),277(TCCGCGCA,+,0.00) -30(CGCGCGCCCCGC,-,0.00),138(CCCAGGCCCCGG,-,0.00) -62(CCGCCTCG,-,0.00),185(CGAGGCGG,+,0.00) -130(GCTCCGCCGC,-,0.00) 136(CGCCCAGGCCCC,-,0.00),232(CACCCAGGCCCC,-,0.00) 561_WT_peak_4029 chr2 38830056 38830226 + 60 NA promoter-TSS (NM_001142650) promoter-TSS (NM_001142650) 37 NM_138394 92906 Hs.445497 NM_138394 HPRD:13667 HNRNPLL HNRPLL|SRRF heterogeneous nuclear ribonucleoprotein L-like protein-coding 0.123529 0.725146 -96(CGCGCAGGCCGA,-,0.00) -13(CGGCCCGGGTTC,+,0.00) -110(AAGCCGCT,+,0.00) -74(CCGCCTTCGCGG,+,0.00) -77(CCCCCGCC,-,0.00),-17(CCCCCGGC,-,0.00) -98(GCCGCGCA,+,0.00) -70(CTTCGCGG,+,0.00) 561_WT_peak_6248 chr6 28949430 28949639 + 60 NA Intergenic Intergenic 23503 NM_001010877 282890 Hs.148218 NM_001010877 HPRD:18325 ZNF311 zf31 zinc finger protein 311 protein-coding 0.047847 0.404762 -148(TCATGCCG,+,0.00) -163(AAAAACCG,+,0.00) -75(GGCTCCGCCC,-,0.00) 561_WT_peak_2994 chr17 4851270 4851785 + 60 NA intron (NM_005022, intron 1 of 2) CpG 854 NM_005022 5216 Hs.494691 NM_005022 HPRD:01452 PFN1 ALS18 profilin 1 protein-coding 0.120388 0.728682 163(GACGGAGGGCGA,-,0.00) 154(GGCGGCCCAG,+,0.00) -19(AGCCGCCA,-,0.00) 147(CGGGGACGGCGG,-,0.00),332(GGGGGGAGGCGG,-,0.00) 45(CCGCGCCCGCCC,+,0.00),320(CGGCTGGCGGGC,-,0.00) -136(TCCCCGCCCT,+,0.00) 329(GGCGGGGG,+,0.00) -10(TCGCGCCG,+,0.00) -139(CCCTCCCCGCCC,+,0.00) 81(CCAAACCG,+,0.00) 141(TTTTCCCG,-,0.00) -146(GCCGCGCC,+,0.00),44(ACCGCGCC,+,0.00),103(ACCGCGCA,+,0.00) 107(CGCAGGCCTCGC,-,0.00),146(CCGGGGACGGCG,+,0.00) -106(CGTCGCGG,+,0.00) 248(CCGGCCATGGCG,+,0.00),250(GGCCATGGCGCT,-,0.00) -74(GCGCCGCCGC,-,0.00) 561_WT_peak_1561 chr12 6644331 6644525 + 60 NA promoter-TSS (NM_001256799) promoter-TSS (NM_001256799) 43 NM_001256799 2597 Hs.544577 NM_002046 HPRD:00713 GAPDH G3PD|GAPD|HEL-S-162eP glyceraldehyde-3-phosphate dehydrogenase protein-coding 0.097938 0.676923 -85(TGCGCAGC,-,0.00) -105(CGCAGGCCCCGG,-,0.00) -37(GCCGCCATGTTG,+,0.00) 561_WT_peak_4886 chr22 31555936 31556118 + 60 NA promoter-TSS (NR_024210) promoter-TSS (NR_024210) 78 NR_037496 100500901 NR_037496 miRBase:MI0016438 MIR3928 - microRNA 3928 ncRNA 0.065934 0.573770 -114(CGCCCGGC,-,0.00) -118(ACCGCGCC,+,0.00) 561_WT_peak_984 chr10 46168399 46168590 + 60 NA promoter-TSS (NM_001128324) promoter-TSS (NM_001128324) -233 NM_001282906 93550 Hs.89029 NM_174890 HPRD:16494 ZFAND4 ANUBL1 zinc finger, AN1-type domain 4 protein-coding 0.078534 0.640625 -91(AGCCGCAT,-,0.00) -118(TCGTGCCC,+,0.00) 561_WT_peak_2540 chr15 70784748 70785061 + 60 NA Intergenic MIRc|SINE|MIR 209716 NM_001008224 55075 Hs.108049 NM_018003 HPRD:11657 UACA NUCLING uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding 0.012780 0.535032 561_WT_peak_6521 chr6 152630855 152631165 + 60 NA exon (NM_033071, exon 89 of 146) exon (NM_033071, exon 89 of 146) -70655 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA 0.019355 0.543408 57(GGGATCCGGAGG,+,0.00),97(CCTTCGGCTTCA,-,0.00) 561_WT_peak_2263 chr14 66313908 66314093 + 60 NA Intergenic Intergenic 434552 NR_038170 2530 Hs.597649 NM_004480 HPRD:03994 FUT8 - fucosyltransferase 8 (alpha (1,6) fucosyltransferase) protein-coding 0.016216 0.473118 561_WT_peak_4509 chr2 235355169 235355348 + 60 NA Intergenic Intergenic 50435 NM_005737 10123 Hs.111554 NM_005737 HPRD:11988 ARL4C ARL7|LAK ADP-ribosylation factor-like 4C protein-coding 0.011173 0.600000 -52(GCTTCCTGTCTC,-,0.00) 561_WT_peak_6845 chr7 130792598 130792800 + 60 NA promoter-TSS (NR_024153) promoter-TSS (NR_024153) -910 NR_024153 378805 Hs.150556 NM_001085379 ENSG00000226380 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA 0.094059 0.709360 -29(GGCGTCGC,-,0.00) -34(CCCCCGGC,-,0.00) -157(CGGGAGGAGCGG,+,0.00) -105(CGGCTAAA,+,0.00) -80(TGGGCGGT,-,0.00) -65(CCGGCCAGGGCC,+,0.00) 561_WT_peak_802 chr1 235062393 235062575 + 60 NA Intergenic Intergenic 202695 NR_038856 100506810 Hs.586634 NR_038856 ENSG00000227630 LINC01132 - long intergenic non-protein coding RNA 1132 ncRNA 0.032967 0.562842 561_WT_peak_6868 chr7 139044858 139045113 + 60 NA 5' UTR (NM_001270643, exon 1 of 11) 5' UTR (NM_001270643, exon 1 of 11) 393 NM_001270643 51631 Hs.731488 NM_016019 HPRD:17456 LUC7L2 CGI-74|LUC7B2 LUC7-like 2 (S. cerevisiae) protein-coding 0.101961 0.734375 49(AAGTCTCT,+,0.00) -45(CCCCCGCC,-,0.00) -160(CCTCCGGCTCCC,-,0.00) -135(CGAGGCGG,+,0.00) -20(GCCGCCATGTCG,+,0.00),-18(CGCCATGTCGGC,-,0.00) 561_WT_peak_3315 chr17 65417883 65418104 + 60 NA intron (NM_181671, intron 1 of 9) L2c|LINE|L2 44596 NM_012417 26207 Hs.591185 NM_012417 HPRD:05504 PITPNC1 M-RDGB-beta|MRDGBbeta|RDGB-BETA|RDGBB|RDGBB1 phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding 0.013575 0.427928 561_WT_peak_4515 chr2 238609431 238609691 + 60 NA intron (NM_001137552, intron 1 of 10) intron (NM_001137552, intron 1 of 10) 8754 NM_001137553 9208 Hs.471779 NM_004735 HPRD:04460 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP leucine rich repeat (in FLII) interacting protein 1 protein-coding 0.015385 0.551724 -135(AGCCGCCT,-,0.00) -93(CCTTCTCAGCCT,+,0.00) 561_WT_peak_1969 chr13 28000064 28000234 + 60 NA intron (NM_002097, intron 1 of 8) intron (NM_002097, intron 1 of 8) 1468 NM_002097 2971 Hs.445977 NM_002097 HPRD:02916 GTF3A AP2|TFIIIA general transcription factor IIIA protein-coding 0.029412 0.538012 -44(CGGCATGA,-,0.00) 561_WT_peak_6522 chr6 153323744 153324079 + 60 NA promoter-TSS (NM_019041) promoter-TSS (NM_019041) 14 NM_019041 54516 Hs.225836 NM_019041 HPRD:17613 MTRF1L HMRF1L|MRF1L|mtRF1a mitochondrial translational release factor 1-like protein-coding 0.089552 0.654762 150(AGGGGCGGGC,-,0.00) 126(GGGCTGAGCGGA,-,0.00) -152(GCTGGGCCAACG,+,0.00),-135(GCGGGGCCAGAG,+,0.00) 15(AGCCCCGCCC,-,0.00) 62(CTTGGCGG,+,0.00) 59(AGCCTTGGCGGG,-,0.00) 561_WT_peak_4479 chr2 220144161 220144516 + 60 NA intron (NM_006736, intron 1 of 8) CpG 298 NM_006736 3300 Hs.77768 NM_006736 HPRD:07249 DNAJB2 DSMA5|HSJ-1|HSJ1|HSPF3 DnaJ (Hsp40) homolog, subfamily B, member 2 protein-coding 0.078873 0.733146 115(CCGCCACCCGGG,+,0.00),122(CCGGGGAGGGGG,-,0.00) -1(GGCGTCGA,-,0.00) -137(GGCGGGGG,+,0.00),-79(GCCGGGGG,+,0.00) -120(GGGCGCCGCAGG,+,0.00) 561_WT_peak_559 chr1 156187821 156188051 + 60 NA intron (NM_001199664, intron 1 of 4) L1ME5|LINE|L1 5157 NM_001199663 100527963 Hs.530479 NM_001199661 ENSG00000260238 PMF1-BGLAP PMF1 PMF1-BGLAP readthrough protein-coding 0.004348 0.385281 561_WT_peak_6396 chr6 90943822 90944012 + 60 NA intron (NM_001170794, intron 1 of 6) intron (NM_001170794, intron 1 of 6) 62710 NM_021813 60468 Hs.269764 NM_021813 HPRD:12012 BACH2 BTBD25 BTB and CNC homology 1, basic leucine zipper transcription factor 2 protein-coding 0.026316 0.465969 -21(TCAGTCGG,-,0.00) -55(CAGGTAAA,+,0.00) -140(GGGAGCCGATGA,+,0.00) 561_WT_peak_157 chr1 32757783 32757960 + 60 NA intron (NM_004964, intron 1 of 13) CpG 163 NM_004964 3065 Hs.88556 NM_004964 HPRD:03143 HDAC1 GON-10|HD1|RPD3|RPD3L1 histone deacetylase 1 protein-coding 0.096045 0.724719 -110(GGCGGGGG,+,0.00) -3(AGGCTGCGAGGG,-,0.00) -109(GCGGGGGCGGGG,+,0.00),-103(GCGGGGCCAGGC,+,0.00) -1(GCTGCGAGGG,+,0.00) -101(GGGGCCAGGCCG,+,0.00),-100(GGGCCAGGCCGG,-,0.00) 561_WT_peak_303 chr1 85741950 85742213 + 60 NA promoter-TSS (NR_045484) promoter-TSS (NR_045484) 40 NR_045484 646626 Hs.193516 NR_045484 LOC646626 - uncharacterized LOC646626 ncRNA 0.095057 0.689394 -56(TCTTCCGGGTCC,-,0.00),-2(GCCTCCGGGTAA,-,0.00) -46(CCGGGAGCTCGG,-,0.00) -26(GCCCCGCCCT,+,0.00) -61(GCGCTTCTTCCG,-,0.00),12(GGGAAGAAGGAG,+,0.00) 3(CGGGTAAT,+,0.00) -164(CCCGCCCTGGGC,+,0.00),-24(CCCGCCCTGGCT,+,0.00) -34(GCTGCGCCGC,+,0.00),-34(GCTGCGCCGC,-,0.00) -23(CCGCCCTGGCTG,+,0.00) 561_WT_peak_1790 chr12 90103569 90103886 + 60 NA non-coding (NR_028138, exon 1 of 1) non-coding (NR_028138, exon 1 of 1) 995 NR_028138 338758 Hs.601766 NR_028138 ENSG00000271614 LINC00936 - long intergenic non-protein coding RNA 936 ncRNA 0.110410 0.707547 -7(GCGGGAGGGCGA,-,0.00) 104(TCGACGCC,+,0.00) 93(CCAAACCG,+,0.00) -145(GCGGGGCCGGGC,+,0.00) -146(CGCGGGGCCGGG,+,0.00),62(AGCGGCTCCTCG,-,0.00) -128(CCGCGACG,-,0.00) -142(GGGCCGGGCCGC,-,0.00) 561_WT_peak_936 chr10 30984786 30985038 + 60 NA non-coding (NR_036438, exon 2 of 10) non-coding (NR_036438, exon 2 of 10) 3709 NR_036438 645954 Hs.408581 NR_036438 ENSG00000234814 SVILP1 - supervillin pseudogene 1 pseudo 0.035714 0.498024 -26(CCTGCGGAGC,+,0.00) 561_WT_peak_233 chr1 52344235 52344417 + 60 NA promoter-TSS (NM_001242361) promoter-TSS (NM_001242361) 283 NM_002525 4898 Hs.584782 NM_002525 HPRD:04036 NRD1 hNRD1|hNRD2 nardilysin (N-arginine dibasic convertase) protein-coding 0.060440 0.666667 -70(CCCACCTCCTCC,+,0.00) -17(GCCGCGGG,+,0.00) 561_WT_peak_6006 chr5 159545780 159545968 + 60 NA exon (NM_001267035, exon 1 of 3) exon (NM_001267035, exon 1 of 3) 578 NM_001130864 114825 Hs.744960 NM_052927 ENSG00000170234 PWWP2A MST101 PWWP domain containing 2A protein-coding 0.117021 0.677249 -147(GGGCGGGCGCGG,-,0.00) -84(CGGAACGA,-,0.00),-79(CGACACGA,-,0.00),17(CGGCACGA,-,0.00) -142(GGCGCGGT,-,0.00) 561_WT_peak_4538 chr20 1098990 1099238 + 60 NA promoter-TSS (NM_006814) promoter-TSS (NM_006814) -126 NM_006814 9491 Hs.471917 NM_006814 HPRD:17919 PSMF1 PI31 proteasome (prosome, macropain) inhibitor subunit 1 (PI31) protein-coding 0.088710 0.662651 -36(AGACCCGGCTTC,+,0.00) -164(AGCCACAT,-,0.00) -24(CGGCTTTG,-,0.00) -75(CGCTGTGCCCGC,-,0.00) -42(CCGCCAAG,-,0.00) -43(GCCGCCAAGACC,+,0.00) -104(GCCTCTCAGC,-,0.00) 561_WT_peak_4339 chr2 158260972 158261202 + 60 NA Intergenic Intergenic 39517 NM_004288 9595 Hs.270 NM_004288 HPRD:09192 CYTIP B3-1|CASP|CYBR|CYTHIP|HE|PSCDBP cytohesin 1 interacting protein protein-coding 0.008696 0.411255 -130(GAAGCAGCAAGC,+,0.00) 561_WT_peak_3423 chr18 9082850 9083102 + 60 NA Intergenic Intergenic -19652 NM_021074 4729 Hs.464572 NM_021074 HPRD:02757 NDUFV2 CI-24k NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa protein-coding 0.007937 0.411067 75(AAGCCGCT,+,0.00),76(AGCCGCTT,-,0.00) -28(CAGGTAAA,+,0.00) 561_WT_peak_1078 chr10 88281293 88281463 + 60 NA 5' UTR (NM_015045, exon 1 of 19) 5' UTR (NM_015045, exon 1 of 19) 163 NM_015045 23063 Hs.203099 NM_015045 HPRD:11072 WAPAL FOE|KIAA0261|WAPL wings apart-like homolog (Drosophila) protein-coding 0.117647 0.760234 -49(CTGGGCCGCC,-,0.00) -164(GAGCGGCGGCCC,+,0.00) -26(CCGCCGCTTCCG,-,0.00),-23(CCGCTTCCGCCG,-,0.00) -161(CGGCGGCCCCGC,-,0.00) -138(CCGCCTCG,-,0.00) -29(GCGCCGCCGC,-,0.00) 561_WT_peak_7213 chr9 15299677 15299848 + 60 NA intron (NM_001168339, intron 1 of 19) intron (NM_001168339, intron 1 of 19) 7596 NM_001168341 158219 Hs.563630 NM_152574 HPRD:10801 TTC39B C9orf52 tetratricopeptide repeat domain 39B protein-coding 0.011696 0.500000 -128(TTGGTCGG,-,0.00) 561_WT_peak_85 chr1 19278325 19278865 + 60 NA intron (NM_001136265, intron 1 of 8) intron (NM_001136265, intron 1 of 8) 4231 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding 0.014815 0.545287 561_WT_peak_3737 chr19 36618816 36618997 + 60 NA Intergenic CpG -12012 NM_001003962 826 Hs.515371 NM_001749 HPRD:00240 CAPNS1 30K|CALPAIN4|CANP|CANPS|CAPN4|CDPS|CSS1 calpain, small subunit 1 protein-coding 0.060773 0.587912 561_WT_peak_632 chr1 174992332 174992524 + 60 NA non-coding (NR_037606, exon 1 of 3) non-coding (NR_037606, exon 1 of 3) 163 NM_022100 63931 Hs.654858 NM_022100 HPRD:14777 MRPS14 DJ262D12.2|HSMRPS14|MRP-S14|S14mt mitochondrial ribosomal protein S14 protein-coding 0.062500 0.626943 -127(GGAAGAGGGCGG,-,0.00) -7(AGAGGCCT,-,0.00) 561_WT_peak_4925 chr22 40296873 40297135 + 60 NA promoter-TSS (NM_004810) promoter-TSS (NM_004810) -82 NM_004810 9402 Hs.517499 NM_004810 HPRD:05156 GRAP2 GADS|GRAP-2|GRB2L|GRBLG|GRID|GRPL|GrbX|Grf40|Mona|P38 GRB2-related adaptor protein 2 protein-coding 0.007634 0.433460 -25(CAAAACCA,+,0.00) 561_WT_peak_3614 chr19 9946028 9946202 + 60 NA intron (NM_006221, intron 1 of 3) CpG 232 NR_038422 5300 Hs.465849 NM_006221 HPRD:03031 PIN1 DOD|UBL5 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 protein-coding 0.126437 0.754286 -98(GGGCTGGGGCGG,-,0.00) -73(CGCGTAAG,+,0.00) -149(CGCCCGGC,-,0.00),-111(GCCGCGGG,+,0.00) -83(TGCGCGGG,-,0.00),-43(GGCGCGGC,-,0.00) -40(GCGGCGGCAGCG,+,0.00) -81(CGCGGGCCCGCG,+,0.00),-81(CGCGGGCCCGCG,-,0.00) 2(CCGCGTCG,-,0.00) -151(GCCGCCCGGCTG,+,0.00),-12(GGGTCCTGGCTC,+,0.00) 561_WT_peak_1887 chr12 121124598 121124794 + 60 NA promoter-TSS (NM_014730) promoter-TSS (NM_014730) -253 NM_014730 9761 Hs.744910 NM_014730 HPRD:13781 MLEC KIAA0152 malectin protein-coding 0.091837 0.685279 -86(GATTCCGGGGCC,-,0.00) -59(CCGCCACTTCCG,-,0.00) 15(GCTGGGCCGGCG,+,0.00) -77(GCCGCCTGGGCG,+,0.00) 561_WT_peak_3805 chr19 46001954 46002480 + 60 NA exon (NM_001080401, exon 1 of 5) exon (NM_001080401, exon 1 of 5) 486 NM_001080401 147699 Hs.532872 NM_178494 PPM1N - protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative) protein-coding 0.127376 0.719165 -10(GGGCCCGGAGCC,+,0.00) 227(CCGGGAACGCGA,-,0.00),336(CCGGGGAGGCCC,-,0.00) -83(TCGACGGC,+,0.00),221(TCGACCCC,+,0.00),244(TCCACGCC,+,0.00),276(CGCGTCGA,-,0.00) 57(GAGCGCCTGCGC,+,0.00),178(GCGCTGGCGCCG,-,0.00) 17(CGTGCGCG,-,0.00) 257(CGGCACCA,-,0.00) 72(CTCTGGCCCCGC,-,0.00),179(CGCTGGCGCCGT,-,0.00),267(CGCCGCCGCCGC,-,0.00) 169(TGCTGAGCCGCG,+,0.00) 275(CCGCGTCG,-,0.00) 183(GGCGCCGTGGCC,+,0.00) 242(CATCCACGCCGC,-,0.00) 561_WT_peak_1011 chr10 64564804 64564974 + 60 NA exon (NM_032804, exon 1 of 1) exon (NM_032804, exon 1 of 1) 373 NM_032804 84890 Hs.99821 NM_032804 HPRD:12566 ADO C10orf22 2-aminoethanethiol (cysteamine) dioxygenase protein-coding 0.123529 0.713450 -90(CCTTCCGGGGCA,-,0.00),-38(TGGCCCGGAGGC,+,0.00) -73(GGCGGCCGCG,+,0.00) -29(GGCGCCGA,-,0.00) -53(TCGCGACG,-,0.00) -78(GCGGGGGCGGCC,+,0.00) -50(CGACGCGG,+,0.00) 561_WT_peak_2212 chr14 53173882 53174216 + 60 NA intron (NM_002806, intron 1 of 13) CpG 153 NM_002806 5706 Hs.156171 NM_002806 HPRD:04086 PSMC6 CADP44|HEL-S-73|P44|SUG2|p42 proteasome (prosome, macropain) 26S subunit, ATPase, 6 protein-coding 0.059880 0.576119 -44(TCGACGGC,+,0.00) -156(ACGGCCATGGCC,+,0.00) 561_WT_peak_4556 chr20 5093659 5094047 + 60 NA promoter-TSS (NM_014145) promoter-TSS (NM_014145) -120 NM_001009924 29058 Hs.472024 NM_014145 HPRD:12762 TMEM230 C20orf30|HSPC274|dJ1116H23.2.1 transmembrane protein 230 protein-coding 0.082474 0.652956 19(GACTCCGGGGCT,-,0.00),34(CGGCCCGAATGC,+,0.00) 107(GGCGGGCGAG,+,0.00) -49(AAGCGTTT,+,0.00) -31(CCAGCTTCCCGG,+,0.00) -88(GCGTGCCG,+,0.00),34(CGGCCCGA,-,0.00) -70(CGTCGGAA,+,0.00) 54(GGGTTTTG,-,0.00) -36(TTTACCCA,-,0.00) 561_WT_peak_300 chr1 85039736 85040043 + 60 NA intron (NM_004388, intron 1 of 6) CpG 274 NM_004388 1486 Hs.513557 NM_004388 CTBS CTB chitobiase, di-N-acetyl- protein-coding 0.078176 0.616883 48(GGCGGCAGAG,+,0.00) -75(TCGGCGCC,+,0.00) 100(CAGCGCCAGCAG,+,0.00),109(CAGCGCCAGCAG,+,0.00),118(CAGCGCCAGCAG,+,0.00) 45(TCGGGCGG,-,0.00) -24(TCGTGCCC,+,0.00) -113(TAAACAGGAAGG,+,0.00) 561_WT_peak_2259 chr14 65381176 65381378 + 60 NA intron (NM_001204064, intron 1 of 2) CpG 198 NM_001202558 100529261 Hs.325531 NM_001202558 CHURC1-FNTB - CHURC1-FNTB readthrough protein-coding 0.094059 0.665025 7(CTCGGCCGCA,-,0.00) -46(AGGTGTCT,+,0.00) -8(CGTACGTG,-,0.00) -133(CGTCGCGA,+,0.00) 561_WT_peak_2206 chr14 52118168 52118343 + 60 NA promoter-TSS (NM_152330) promoter-TSS (NM_152330) 207 NR_037676 145438 Hs.645410 NR_037676 FRMD6-AS1 C14orf82 FRMD6 antisense RNA 1 ncRNA 0.097143 0.727273 -97(GGGAGCCGCCGG,+,0.00) 561_WT_peak_301 chr1 85410800 85411005 + 60 NA intron (NM_153259, intron 7 of 13) intron (NM_153259, intron 7 of 13) 51894 NM_153259 255231 Hs.591446 NM_153259 HPRD:09584 MCOLN2 TRP-ML2|TRPML2 mucolipin 2 protein-coding 0.009756 0.417476 561_WT_peak_2084 chr13 98085786 98085956 + 59 NA promoter-TSS (NM_021033) promoter-TSS (NM_021033) -604 NM_021033 5911 Hs.508480 NM_021033 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding 0.029412 0.502924 -7(CCCTCGCGGCCC,+,0.00) -20(CATCGGAC,+,0.00) -9(GGCCCTCGCGGC,-,0.00) 561_WT_peak_4978 chr22 50969489 50970012 + 59 NA intron (NM_001014440, intron 3 of 6) CpG-18151 -1236 NM_001257989 1890 Hs.180903 NM_001953 HPRD:08833 TYMP ECGF|ECGF1|MEDPS1|MNGIE|MTDPS1|PDECGF|TP|hPD-ECGF thymidine phosphorylase protein-coding 0.068834 0.671756 -161(GGAGGAGGCAGG,-,0.00),-121(GGCGCAGGGTGG,-,0.00) -101(CCCGGAGGGCGG,-,0.00) 49(CGCTCGCTCCGG,-,0.00) 561_WT_peak_1794 chr12 92578974 92579203 + 59 NA Intergenic MLT1F2|LTR|ERVL-MaLR -39415 NM_001731 694 Hs.255935 NM_001731 BTG1 - B-cell translocation gene 1, anti-proliferative protein-coding 0.000000 0.439130 -31(AGCCACTA,-,0.00) -157(GCTTCTCAGC,-,0.00) 561_WT_peak_2889 chr16 70333080 70333271 + 59 NA 5' UTR (NM_001014451, exon 1 of 11) 5' UTR (NM_001014451, exon 1 of 11) 113 NM_007242 11269 Hs.221761 NM_007242 HPRD:05781 DDX19B DBP5|DDX19|RNAh DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B protein-coding 0.078534 0.671875 -96(TCGTGCCA,+,0.00),-74(CAGCACGA,-,0.00) -26(GGCCCTGGCGGT,-,0.00) 561_WT_peak_3464 chr18 21166520 21166836 + 59 NA promoter-TSS (NM_000271) promoter-TSS (NM_000271) -97 NM_000271 4864 Hs.464779 NM_000271 HPRD:09622 NPC1 NPC Niemann-Pick disease, type C1 protein-coding 0.085443 0.649842 32(GGCGGGCGAG,+,0.00) 138(AGCGACTT,-,0.00) -152(GGGCTGGGGCGC,-,0.00) 90(CGCCCGGC,-,0.00) 78(CGGGTAAG,+,0.00) -161(CCCTGGCCCGGG,-,0.00) -52(GGCTCGGCCC,-,0.00) -144(GCGCCGCCGC,-,0.00) 89(CCGCCCGGCCGC,-,0.00) 561_WT_peak_4110 chr2 65454999 65455176 + 59 NA exon (NM_001005386, exon 1 of 10) exon (NM_001005386, exon 1 of 10) 258 NM_001005386 10097 Hs.643727 NM_005722 HPRD:05023 ACTR2 ARP2 ARP2 actin-related protein 2 homolog (yeast) protein-coding 0.101695 0.730337 -2(CTCGGCCCCC,-,0.00) -109(AGGGCAGGAA,-,0.00) -4(CCCTCGGCCCCC,-,0.00) -50(CTTGGCGG,+,0.00) -53(GGCCTTGGCGGC,-,0.00) 561_WT_peak_3185 chr17 40950474 40950696 + 59 NA promoter-TSS (NM_173478) promoter-TSS (NM_173478) 158 NM_001040431 28958 Hs.16059 NM_001040431 ENSG00000183978 COA3 CCDC56|MITRAC12 cytochrome c oxidase assembly factor 3 protein-coding 0.094595 0.632287 -100(TCGCCGCC,+,0.00) -28(CAGCTTCTCCCG,-,0.00) -19(CCGAGTCG,-,0.00),-18(CGAGTCGG,+,0.00) 561_WT_peak_5410 chr4 7651472 7651876 + 59 NA intron (NM_020777, intron 4 of 26) intron (NM_020777, intron 4 of 26) -104143 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA 0.029703 0.508642 66(TGGCGGCT,+,0.00) 561_WT_peak_3504 chr18 47346285 47346577 + 59 NA intron (NR_117096, intron 1 of 3) intron (NR_117096, intron 1 of 3) 6038 NR_117096 103091864 Hs.646459 NR_117096 SNHG22 SCARNA17HG small nucleolar RNA host gene 22 (non-protein coding) ncRNA 0.000000 0.378840 561_WT_peak_5683 chr5 32586275 32586406 + 59 NA intron (NM_006713, intron 1 of 4) CpG 735 NM_006713 10923 Hs.229641 NM_006713 HPRD:02737 SUB1 P15|PC4|p14 SUB1 homolog (S. cerevisiae) protein-coding 0.083969 0.681818 -96(TAGCGGCT,+,0.00),-95(AGCGGCTT,-,0.00) -145(CCGACCAA,+,0.00) -110(TAGCCACG,-,0.00) 561_WT_peak_618 chr1 171750339 171750590 + 59 NA promoter-TSS (NM_015935) promoter-TSS (NM_015935) -297 NM_015935 51603 Hs.494705 NM_014955 HPRD:13821 METTL13 5630401D24Rik|KIAA0859|feat methyltransferase like 13 protein-coding 0.083665 0.626984 -27(GGAGGCCGAG,+,0.00) -2(CGCTCTCCGCCC,+,0.00) 561_WT_peak_3403 chr17 81148272 81148446 + 59 NA Intergenic Intergenic -26307 NR_029406 388574 Hs.546918 NR_029406 ENSG00000232938 FLJ43681 - ribosomal protein L23a pseudogene pseudo 0.045977 0.622857 2(AGAGGCTT,-,0.00) -117(CGTCGCTG,+,0.00) 561_WT_peak_1224 chr11 17297874 17298076 + 59 NA promoter-TSS (NM_005013) promoter-TSS (NM_005013) -311 NM_005013 4925 Hs.654599 NM_005013 HPRD:09726 NUCB2 HEL-S-109|NEFA nucleobindin 2 protein-coding 0.069307 0.674877 -43(CCGCCCGA,+,0.00) -14(CGGGTAAG,+,0.00) 8(GGCGCGGC,-,0.00) 561_WT_peak_627 chr1 173793760 173794284 + 59 NA promoter-TSS (NM_001171182) promoter-TSS (NM_001171182) 225 NM_018122 55157 Hs.647707 NM_018122 HPRD:07677 DARS2 ASPRS|LBSL|MT-ASPRS aspartyl-tRNA synthetase 2, mitochondrial protein-coding 0.064885 0.540952 28(TTTTCCGGTTCT,-,0.00) 41(GCCGCGGG,+,0.00) 127(CGCCGCTA,+,0.00) 33(CGGTTCTG,-,0.00) -43(CCTTCCTCTTTC,-,0.00) 121(GCCTGGCGCCGC,-,0.00) -123(GGGCGGAGTT,+,0.00),-21(AAATCGGCCA,-,0.00) 561_WT_peak_1171 chr10 135121472 135121661 + 59 NA promoter-TSS (NM_145806) promoter-TSS (NM_145806) -857 NM_145806 118472 Hs.422113 NM_145806 HPRD:15812 ZNF511 - zinc finger protein 511 protein-coding 0.037037 0.552632 -18(AAGCCTCT,+,0.00) 561_WT_peak_3754 chr19 38865267 38865786 + 59 NA exon (NM_002812, exon 1 of 7) exon (NM_002812, exon 1 of 7) 336 NM_002812 5714 Hs.78466 NM_002812 HPRD:10171 PSMD8 HEL-S-91n|HIP6|HYPF|Nin1p|Rpn12|S14|p31 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 protein-coding 0.104046 0.676923 2(GGCGGCCGCG,+,0.00) -58(AAGCGTTT,+,0.00),224(AGGTGTCT,+,0.00),259(AGCCACCT,-,0.00) 345(GGCGTCAA,-,0.00) 48(CCCGCGGC,-,0.00) -150(GAGCGACG,-,0.00) -84(ACCTCTCGGCCC,+,0.00),335(GGGCTCGGAGGG,-,0.00) -95(CCTTGGGCTCCA,-,0.00),295(GGGATCCGATGG,+,0.00) -65(GCCGGGCAAGCG,+,0.00),41(CTCCGGGCCCGC,-,0.00),266(TCGGTGCCAGCG,+,0.00) -109(AGCCCCGCCC,-,0.00) 561_WT_peak_267 chr1 65431582 65431759 + 59 NA intron (NM_002227, intron 1 of 24) CpG 517 NM_002227 3716 Hs.207538 NM_002227 HPRD:00992 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding 0.096045 0.651685 -140(GAGCTGGCGGTC,-,0.00) -14(CGTGCGCG,-,0.00) -108(TAGGGACG,-,0.00) -12(TGCGCGCT,-,0.00) 561_WT_peak_7292 chr9 73026796 73027028 + 59 NA intron (NM_001206, intron 1 of 1) intron (NM_001206, intron 1 of 1) 2661 NM_001206 687 Hs.150557 NM_001206 HPRD:04211 KLF9 BTEB|BTEB1 Kruppel-like factor 9 protein-coding 0.012931 0.472103 38(CAGAACCG,+,0.00) 42(ACCGCCCA,+,0.00) 561_WT_peak_6382 chr6 86303460 86303980 + 59 NA non-coding (NR_123729, exon 1 of 29) non-coding (NR_123729, exon 1 of 29) 130 NM_153816 57231 Hs.485871 NM_020468 HPRD:11590 SNX14 RGS-PX2 sorting nexin 14 protein-coding 0.105769 0.677543 203(GGAGGAGAGGGA,-,0.00) -82(AGACGCCT,-,0.00),65(AAGCCTCT,+,0.00),72(TAGCGTCT,+,0.00) -45(CGCGTCCG,+,0.00),-9(CGCGTGCG,+,0.00),-7(CGTGCGCG,-,0.00) -105(CCCACCGA,+,0.00) -18(CCCCCGCC,-,0.00),261(GCCGGGCG,+,0.00) -5(TGCGCGGC,-,0.00),106(AGCGCGCA,+,0.00) 80(CGCCGCTCCGCC,-,0.00) -97(CTTGGCGG,+,0.00) 561_WT_peak_7290 chr9 72873279 72874024 + 59 NA promoter-TSS (NM_015110) promoter-TSS (NM_015110) 139 NR_039990 100507299 Hs.556816 NR_039990 SMC5-AS1 MAMDC2-AS2 SMC5 antisense RNA 1 (head to head) ncRNA 0.085906 0.599196 99(GGCGGCCGTG,+,0.00) 172(AAGTGGCT,+,0.00),522(AAGTCGCT,+,0.00) 107(TGGACGCC,+,0.00) 407(CGGCGCGA,-,0.00) 354(CGGGAGGGGCGG,+,0.00) -73(CGTCGGGC,+,0.00),383(CGCCGGAC,+,0.00) -28(GAGACAGGAACC,+,0.00),306(GCCTGCTGTTTC,-,0.00) 395(ACTGCGCA,+,0.00),403(GGCGCGGC,-,0.00) 362(GCGGGGCGGGCC,+,0.00) 96(CTTGGCGG,+,0.00) 91(CCCGCCTTGGCG,+,0.00),93(CGCCTTGGCGGC,-,0.00) 343(GCGGCGGAGC,+,0.00) 561_WT_peak_6448 chr6 116782961 116783269 + 59 NA exon (NM_001010919, exon 2 of 3) exon (NM_001010919, exon 2 of 3) 582 NM_001010919 441168 Hs.381220 NM_001010919 HPRD:18644 FAM26F C6orf187|dJ93H18.5 family with sequence similarity 26, member F protein-coding 0.077922 0.634304 -56(GCGACGCC,+,0.00) -21(TCGGGCGG,-,0.00) 137(TGGTGCCG,+,0.00) -110(CAAAACCA,+,0.00) 561_WT_peak_4507 chr2 235331619 235331713 + 59 NA Intergenic Intergenic 74027 NM_005737 10123 Hs.111554 NM_005737 HPRD:11988 ARL4C ARL7|LAK ADP-ribosylation factor-like 4C protein-coding 0.021277 0.505263 -108(CGGCTGCTTCCG,-,0.00) 561_WT_peak_1188 chr11 3400156 3400350 + 59 NA intron (NR_040083, intron 1 of 5) CpG 199 NM_001242842 7748 Hs.386294 NM_007152 HPRD:03718 ZNF195 HRF1|ZNFP104 zinc finger protein 195 protein-coding 0.082474 0.697436 -158(CGCGGAGCCCGG,+,0.00) 561_WT_peak_697 chr1 205257503 205257698 + 59 NA Intergenic Intergenic 32271 NM_001297613 9911 Hs.6360 NM_014858 HPRD:11040 TMCC2 HUCEP11 transmembrane and coiled-coil domain family 2 protein-coding 0.005128 0.510204 -79(GGGTTTTG,-,0.00) -31(CTCTGGCCCAGC,-,0.00) 561_WT_peak_7487 chr9 140134874 140135124 + 59 NA promoter-TSS (NM_006088) promoter-TSS (NM_006088) -712 NM_006088 10383 Hs.433615 NM_006088 HPRD:04043 TUBB4B Beta2|TUBB2|TUBB2C tubulin, beta 4B class IVb protein-coding 0.112000 0.760956 -111(CCCCGGCCCT,+,0.00) -138(CCCTCCGCTCCC,-,0.00) -98(GGCGCGGC,-,0.00) -163(CGCGCAGCTGCG,+,0.00) -157(GCTGCGGGGG,+,0.00),56(GCATCGCAGC,-,0.00) 561_WT_peak_2174 chr14 35872870 35873334 + 59 NA intron (NM_020529, intron 1 of 5) CpG 858 NM_020529 4792 Hs.81328 NM_020529 HPRD:01235 NFKBIA IKBA|MAD-3|NFKBI nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha protein-coding 0.084052 0.686022 143(CCGCCCCCCTCC,+,0.00),146(CCCCCCTCCCCC,+,0.00) -164(GAACCCGGGCCA,-,0.00) 70(GGAGGCCGAG,+,0.00) 189(CCGCCCTCCCGC,+,0.00) 237(TCGGCGCC,+,0.00) 186(GCCCCGCCCT,+,0.00) 156(CCCGCGGC,-,0.00) -24(GGGAAGAGAGGG,-,0.00),36(GGGCTGCGGGGG,-,0.00) 159(GCGGCCCCGGCG,+,0.00),261(CTCCCGCCCCGC,-,0.00) 38(GCTGCGGGGG,+,0.00) 176(CGGCCAGACCGC,-,0.00) 561_WT_peak_6094 chr6 8102399 8102753 + 59 NA intron (NR_037618, intron 1 of 6) CpG 252 NM_001135650 9521 Hs.602353 NM_004280 HPRD:10931 EEF1E1 AIMP3|P18 eukaryotic translation elongation factor 1 epsilon 1 protein-coding 0.062147 0.645070 -48(AGGCGCCAGCCG,+,0.00) -34(TAGCGGCG,-,0.00),165(TAGCGACA,-,0.00) 51(GGCAGGCCCCGC,-,0.00) 561_WT_peak_3792 chr19 45458139 45458434 + 59 NA promoter-TSS (NM_001294) promoter-TSS (NM_001294) 36 NM_001282175 1209 Hs.444441 NM_001294 ENSG00000104853 CLPTM1 - cleft lip and palate associated transmembrane protein 1 protein-coding 0.064407 0.530405 -72(TCGAAGCC,+,0.00) -7(AGGGAGAAGCGG,+,0.00) -55(CCGGTAAA,+,0.00),41(CGGGTTAA,+,0.00) 561_WT_peak_6141 chr6 26044429 26044984 + 59 NA promoter-TSS (NM_003531) promoter-TSS (NM_003531) -821 NM_021062 3018 Hs.553494 NM_021062 HPRD:07536 HIST1H2BB H2B.1|H2B/f|H2BFF histone cluster 1, H2bb protein-coding 0.050450 0.512590 245(AGGCGTCT,+,0.00) -158(CCCCCGCC,-,0.00) 161(CGGCGCGA,-,0.00) -98(CGTCACTA,+,0.00) 256(ACCGCGCC,+,0.00) 561_WT_peak_4687 chr20 50147838 50147929 + 59 NA intron (NM_001258292, intron 1 of 9) intron (NM_001258292, intron 1 of 9) 11375 NM_001258297 4773 Hs.744148 NM_012340 HPRD:02730 NFATC2 NFAT1|NFATP nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 protein-coding 0.010989 0.478261 -101(AGACACCT,-,0.00) -139(CACTCTCAGCCC,+,0.00) 561_WT_peak_4505 chr2 235200720 235201167 + 59 NA Intergenic Intergenic 204750 NM_005737 10123 Hs.111554 NM_005737 HPRD:11988 ARL4C ARL7|LAK ADP-ribosylation factor-like 4C protein-coding 0.006711 0.500000 -139(ATGTGGCT,+,0.00) 201(GGGCTGCTTT,+,0.00) 561_WT_peak_604 chr1 167191350 167191432 + 59 NA intron (NM_001198786, intron 1 of 14) intron (NM_001198786, intron 1 of 14) 1268 NR_037163 5451 Hs.283402 NM_002697 HPRD:01250 POU2F1 OCT1|OTF1|oct-1B POU class 2 homeobox 1 protein-coding 0.036585 0.566265 -164(AGAGGCCT,-,0.00) 561_WT_peak_2586 chr15 85291082 85291273 + 59 NA promoter-TSS (NM_014630) promoter-TSS (NM_014630) -641 NM_014630 9640 Hs.79347 NM_014630 HPRD:10339 ZNF592 CAMOS|SCAR5 zinc finger protein 592 protein-coding 0.062827 0.619792 -58(GAGCGCCAGGCC,+,0.00) 561_WT_peak_1034 chr10 70988729 70988931 + 59 NA intron (NM_025130, intron 2 of 17) intron (NM_025130, intron 2 of 17) 3416 NR_120648 101928994 Hs.562925 NR_120648 ENSG00000229261 LOC101928994 - uncharacterized LOC101928994 ncRNA 0.014851 0.517241 -77(AGCCACAT,-,0.00) 16(CCAAACCG,+,0.00) 561_WT_peak_1099 chr10 94351235 94351541 + 59 NA Intergenic CpG -1437 NM_004523 3832 Hs.8878 NM_004523 HPRD:01023 KIF11 EG5|HKSP|KNSL1|MCLMR|TRIP5 kinesin family member 11 protein-coding 0.078431 0.557003 89(CCGGGGCGGCGG,-,0.00) 39(GACCGACG,-,0.00) 77(GGGATCCGTAGG,+,0.00) -68(GGCTCCTGTTTC,-,0.00) 106(TGCGCAGC,-,0.00) 87(GGCCGGGGCGGC,-,0.00) 561_WT_peak_684 chr1 203274742 203274965 + 59 NA promoter-TSS (NR_034150) promoter-TSS (NR_034150) 189 NM_006763 7832 Hs.519162 NM_006763 HPRD:03357 BTG2 PC3|TIS21 BTG family, member 2 protein-coding 0.085202 0.696429 -74(AGAGGCTT,-,0.00) -134(TCGCCGCC,+,0.00) -129(GCCGCCGTGGGC,+,0.00),-13(GGGCCTGGCGCC,-,0.00) -14(GGGGCCTGGCGC,+,0.00) 561_WT_peak_2180 chr14 39644389 39644960 + 59 NA intron (NM_002687, intron 1 of 8) CpG 287 NM_002687 5411 Hs.409965 NM_002687 HPRD:04401 PNN DRS|DRSP|SDK3|memA pinin, desmosome associated protein protein-coding 0.084063 0.652098 114(CGGGGAGGGCGG,-,0.00) 149(TCGAGGCC,+,0.00) 80(GAGAGGCAGCCC,+,0.00) 111(GGGCGGGGAGGG,-,0.00),317(CGCTCTCGGCCC,+,0.00) 368(CGGCGGAC,+,0.00) 171(CGGGTAAA,+,0.00) 25(GGGATCCGAATG,+,0.00) -127(GGCGCGGC,-,0.00) 113(GCGGGGAGGGCG,+,0.00),387(TGCTGGCCCCGA,-,0.00) -138(CGCGCCTCGGCG,-,0.00),161(CGCGGGGCGGCG,+,0.00) 257(GAGGCCTGGGTG,+,0.00) 561_WT_peak_3446 chr18 14178874 14179082 + 59 NA promoter-TSS (NR_040113) promoter-TSS (NR_040113) -118 NR_040113 440482 Hs.632352 NM_001029999 ANKRD20A5P ANKRD20A5 ankyrin repeat domain 20 family, member A5, pseudogene pseudo 0.072115 0.679426 30(AGCGACTT,-,0.00) 27(CCGAGCGA,+,0.00) 561_WT_peak_6792 chr7 102389301 102389522 + 59 NA promoter-TSS (NM_001145268) promoter-TSS (NM_001145268) 12 NM_001145268 222234 Hs.202543 NM_147194 FAM185A - family with sequence similarity 185, member A protein-coding 0.049774 0.563063 48(AACCGGCT,+,0.00) -73(CGTCGGCC,+,0.00) -156(CTTACCCG,-,0.00) 14(TGCGCGGC,-,0.00) 561_WT_peak_3898 chr19 55816972 55817122 + 59 NA intron (NM_032430, intron 16 of 18) intron (NM_032430, intron 16 of 18) 19661 NM_001085488 284417 Hs.382625 NM_001085488 ENSG00000180061 TMEM150B TMEM224 transmembrane protein 150B protein-coding 0.026667 0.556291 -37(TCGGTAGG,-,0.00) 561_WT_peak_5328 chr3 172468176 172468299 + 59 NA promoter-TSS (NM_001258316) promoter-TSS (NM_001258316) -238 NM_001258316 1894 Hs.518299 NM_018098 HPRD:11860 ECT2 ARHGEF31 epithelial cell transforming 2 protein-coding 0.024390 0.411290 561_WT_peak_3196 chr17 42143717 42143925 + 59 NA intron (NM_152344, intron 2 of 5) CpG 1166 NM_152344 124801 Hs.355570 NM_152344 HPRD:08701 LSM12 PNAS-135 LSM12 homolog (S. cerevisiae) protein-coding 0.091346 0.679426 -148(AGGCCCGGAGAG,+,0.00),-84(CGGCCCGGACTC,+,0.00) -137(GAGCCCCAGCCG,+,0.00) 22(CGGCACGA,-,0.00) 561_WT_peak_1233 chr11 22647060 22647392 + 59 NA exon (NM_022725, exon 1 of 1) exon (NM_022725, exon 1 of 1) 161 NM_022725 2188 Hs.632151 NM_022725 HPRD:04589 FANCF FAF Fanconi anemia, complementation group F protein-coding 0.084337 0.648649 -17(CCGACCAA,+,0.00) -124(AGGGCCTGGA,-,0.00) -84(CAAAGCCG,+,0.00) -93(GACCCCGCCC,-,0.00),-83(AAAGCCGCCC,-,0.00) -26(GGGGCCATGCCG,+,0.00),-24(GGCCATGCCGAC,-,0.00) 561_WT_peak_7269 chr9 45356837 45357086 + 59 NA Intergenic CpG -351671 NR_121606 102723709 Hs.743015 NR_121606 LOC102723709 - uncharacterized LOC102723709 ncRNA 0.084337 0.720000 -9(TCGAGGCC,+,0.00) 73(CGGGGCTCTGCG,-,0.00) 561_WT_peak_3215 chr17 44488982 44489083 + 59 NA intron (NR_033799, intron 3 of 6) intron (NR_033799, intron 3 of 6) 38853 NR_033799 728806 Hs.735097 NR_033799 NSFP1 NSFP N-ethylmaleimide-sensitive factor pseudogene 1 pseudo 0.000000 0.500000 -157(GGGAGGTGAAGG,+,0.00) -133(GAAACAGGATGT,+,0.00) 561_WT_peak_5931 chr5 134734959 134735207 + 59 NA promoter-TSS (NM_138610) promoter-TSS (NM_138610) -155 NM_001040158 9555 Hs.420272 NM_004893 HPRD:13624 H2AFY H2A.y|H2A/y|H2AF12M|H2AFJ|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family, member Y protein-coding 0.129032 0.763052 -128(CCGGCCTCCGCG,+,0.00) -90(GACCCCGGGCCC,-,0.00) -66(TTGACGCC,+,0.00) -25(CGGACGCG,-,0.00) -109(CGCCCGGC,-,0.00) -115(CCGTGCCG,+,0.00) -88(CCCCGGGCCCGC,-,0.00) -143(CGCGGCCCCGAG,-,0.00) -146(CTTCGCGG,+,0.00) 31(GGGCCAGGCCCC,-,0.00) 561_WT_peak_6880 chr7 143598991 143599161 + 59 NA promoter-TSS (NM_014719) promoter-TSS (NM_014719) 96 NM_014719 9747 Hs.735149 NM_014719 HPRD:13813 FAM115A - family with sequence similarity 115, member A protein-coding 0.100000 0.713450 -151(AGACGCTA,-,0.00) -141(CGTCGCAC,+,0.00) 561_WT_peak_4712 chr20 60757757 60757927 + 59 NA promoter-TSS (NM_015666) promoter-TSS (NM_015666) -239 NM_015666 26164 Hs.340636 NM_015666 HPRD:13617 MTG2 GTPBP5|ObgH1|dJ1005F21.2 mitochondrial ribosome-associated GTPase 2 protein-coding 0.117647 0.725146 -29(GGGCAGCGAGGG,-,0.00) -127(CGTCAGAC,+,0.00) -26(CAGCGAGGGCGC,-,0.00) 561_WT_peak_1500 chr11 118209526 118209737 + 59 NA TTS (NM_000732) TTS (NM_000732) 3828 NM_001040651 915 Hs.504048 NM_000732 HPRD:01730 CD3D CD3-DELTA|IMD19|T3D CD3d molecule, delta (CD3-TCR complex) protein-coding 0.018957 0.556604 22(GTAGGAGGGCGA,-,0.00) 11(GAAACAGGTAGG,+,0.00) 561_WT_peak_1319 chr11 62420588 62421049 + 59 NA promoter-TSS (NM_030628) promoter-TSS (NM_030628) -44 NM_030628 80789 Hs.458390 NM_030628 HPRD:13883 INTS5 INT5|KIAA1698 integrator complex subunit 5 protein-coding 0.097614 0.645022 163(AGCCGATT,-,0.00),183(AACCACTT,-,0.00) 266(CCGAGAGGGCGG,-,0.00) 221(GCCGGGCG,+,0.00) 144(CGGGACGA,-,0.00) 22(TGCGCGCT,-,0.00),225(GGCGCGGT,-,0.00) 9(CGCAGGCGGCGC,-,0.00) -155(CGCGGGGCCGCG,+,0.00),-155(CGCGGGGCCGCG,-,0.00) 0(GCGGCGGAGC,+,0.00),61(GCCTCGCAGG,-,0.00) 561_WT_peak_4249 chr2 110551850 110552060 + 59 NA promoter-TSS (NM_005054) promoter-TSS (NM_005054) -11 NM_005054 84220 Hs.469630 NM_005054 HPRD:04128 RGPD5 BS-63|BS63|HEL161|RGP5 RANBP2-like and GRIP domain containing 5 protein-coding 0.109524 0.687204 -4(CGCACGCG,-,0.00) 22(CGGCGCGA,-,0.00) -19(GGGCTGAGCGGT,-,0.00) -118(TGGGCGGC,-,0.00) -117(GGGCGGCGCC,+,0.00) 2(CGTCTCGG,+,0.00) -25(GCTGCGGGGC,+,0.00) 561_WT_peak_1304 chr11 60681389 60681583 + 59 NA 5' UTR (NM_024092, exon 1 of 4) 5' UTR (NM_024092, exon 1 of 4) 115 NM_024092 79073 Hs.13662 NM_024092 HPRD:14687 TMEM109 - transmembrane protein 109 protein-coding 0.041237 0.507692 -76(AGAGACTT,-,0.00) -32(TCGGTGGG,-,0.00) -126(TTTACCCA,-,0.00) 561_WT_peak_7307 chr9 77567331 77567512 + 59 NA promoter-TSS (NR_121183) promoter-TSS (NR_121183) 381 NM_017998 55071 Hs.532296 NM_017998 HPRD:12957 C9orf40 - chromosome 9 open reading frame 40 protein-coding 0.121547 0.697802 -133(GCTTTCGGTGCT,-,0.00) -23(AGCCGCTT,-,0.00) -83(CCGGGCGGCCGG,-,0.00) -147(TGCGTCGA,-,0.00) -142(CGATTTTG,-,0.00) 561_WT_peak_3756 chr19 38893272 38893463 + 59 NA promoter-TSS (NM_174905) promoter-TSS (NM_174905) -408 NM_174905 147965 Hs.355162 NM_174905 HPRD:14077 FAM98C - family with sequence similarity 98, member C protein-coding 0.036649 0.520833 -68(GCCGCGATGGCG,+,0.00),-66(CGCGATGGCGCC,-,0.00) -124(GCTGGGAGGC,+,0.00) 561_WT_peak_770 chr1 228745913 228746165 + 59 NA Intergenic CpG -34355 NR_037962 58480 Hs.647774 NM_021205 HPRD:06965 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding 0.063492 0.596838 66(GGCGCCTGGCTG,+,0.00) 561_WT_peak_785 chr1 229643829 229644027 + 59 NA promoter-TSS (NR_110630) promoter-TSS (NR_110630) 160 NM_018230 55746 Hs.12457 NM_018230 HPRD:06354 NUP133 hNUP133 nucleoporin 133kDa protein-coding 0.101010 0.723618 17(AGCGACTA,-,0.00) -82(GGCGTGGA,-,0.00) -158(CCGGCCGA,+,0.00),-154(CCGACCGG,+,0.00) -47(CCTTCGGGACCC,-,0.00) -80(CGTGGAGCCGGG,+,0.00) 561_WT_peak_1132 chr10 104154462 104154700 + 59 NA promoter-TSS (NM_001261403) promoter-TSS (NM_001261403) 246 NM_001077494 4791 Hs.73090 NM_002502 HPRD:01239 NFKB2 CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p105|p52 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) protein-coding 0.113445 0.623431 -147(GGCGACGA,-,0.00),-125(TCGACACC,+,0.00) -76(GTGCTGGCGCAC,-,0.00) -97(CCCGTACG,+,0.00) 561_WT_peak_7086 chr8 101733066 101733347 + 59 NA intron (NM_002568, intron 1 of 14) intron (NM_002568, intron 1 of 14) 1109 NM_002568 26986 Hs.387804 NM_002568 HPRD:05247 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein, cytoplasmic 1 protein-coding 0.067616 0.656028 48(TCAACGCC,+,0.00) -25(AGGCTGGGGCGC,-,0.00) -13(CGGCAGGA,-,0.00) 561_WT_peak_2960 chr16 89939604 89939814 + 59 NA promoter-TSS (NM_014972) promoter-TSS (NM_014972) -285 NM_014972 22980 Hs.415342 NM_014972 HPRD:13830 TCF25 Hulp1|NULP1|PRO2620|hKIAA1049 transcription factor 25 (basic helix-loop-helix) protein-coding 0.133333 0.729858 -80(GGTTCCGGGCCA,-,0.00) -8(TCGAAGCC,+,0.00) -157(TAGCAACG,-,0.00) -116(GCGGGGACAGGC,+,0.00),-35(CGCCGGCTGCGC,-,0.00) -90(CGCGGCTGCGGG,-,0.00) 561_WT_peak_6930 chr8 11141871 11142108 + 59 NA promoter-TSS (NM_015458) promoter-TSS (NM_015458) -11 NM_015458 66036 Hs.591395 NM_015458 HPRD:09377 MTMR9 C8orf9|LIP-STYX|MTMR8 myotubularin related protein 9 protein-coding 0.097046 0.651261 41(GGACCCGGAGCC,+,0.00) -48(AGCCACTT,-,0.00),-9(AAGCGGAT,+,0.00),3(AGGCGGCT,+,0.00) -16(GGCGTGGA,-,0.00) -114(CCGCGTCTTCCG,-,0.00),-91(CTGCTGCTTCCG,-,0.00) -143(TAGCGAGG,-,0.00) -24(GCGGCCAGGGCG,+,0.00),-22(GGCCAGGGCGTG,-,0.00) 561_WT_peak_5847 chr5 89705873 89706094 + 59 NA promoter-TSS (NM_004365) promoter-TSS (NM_004365) 166 NR_105024 731157 Hs.551062 NR_105024 LOC731157 - uncharacterized LOC731157 ncRNA 0.036199 0.527027 561_WT_peak_6003 chr5 158767689 158767862 + 59 NA intron (NR_037889, intron 2 of 4) MIRb|SINE|MIR 9249 NR_037889 285626 Hs.449275 NR_037889 ENSG00000249738 LOC285626 - uncharacterized LOC285626 ncRNA 0.005780 0.448276 561_WT_peak_3909 chr19 56915631 56915856 + 59 NA promoter-TSS (NM_152478) promoter-TSS (NM_152478) 25 NM_001159861 147949 Hs.146854 NM_152478 HPRD:15860 ZNF583 - zinc finger protein 583 protein-coding 0.111111 0.756637 -72(CGCGGCCGCC,-,0.00) -143(CCGCGCCGGCCC,+,0.00) -144(GCCGCGCC,+,0.00),-11(ACCGCGCC,+,0.00) -140(CGCCGGCCCCGG,-,0.00),-115(GCGGCCCCTGCG,+,0.00),-49(CCCTGGCCCGGG,-,0.00),-37(CCCTGGCCCAGC,-,0.00) -91(GCTGCGGCGC,+,0.00) -106(GCGGCCTGCCCT,+,0.00) 561_WT_peak_4902 chr22 37475600 37475863 + 59 NA intron (NM_001289001, intron 10 of 17) MIRb|SINE|MIR 23962 NM_153609 164656 Hs.370885 NM_153609 HPRD:10270 TMPRSS6 IRIDA transmembrane protease, serine 6 protein-coding 0.007605 0.526515 -111(GCTGCAGAGC,+,0.00) -94(GCAGCCTGGCTT,+,0.00) 561_WT_peak_4729 chr20 62670129 62670378 + 59 NA non-coding (NR_027687, exon 3 of 3) non-coding (NR_027687, exon 3 of 3) 4556 NR_027687 284739 Hs.97840 NM_207349 HPRD:17341 LINC00176 NCRNA00176|PRR17 long intergenic non-protein coding RNA 176 ncRNA 0.116466 0.724000 -65(CCGCGCTCCCCG,+,0.00) -75(TCGACGCA,+,0.00) 39(GAGCTGGCGCTG,-,0.00) 65(CCTTCGCCTGCC,-,0.00) -162(TGCGCGGG,-,0.00) -143(GCGGGGCCGCGG,+,0.00) -144(AGCGGGGCCGCG,+,0.00) -90(ACCTCGGCCC,-,0.00) -145(CAGCGGGGCCGC,-,0.00) 561_WT_peak_2273 chr14 71787220 71787471 + 59 NA Intergenic CpG -77709 NR_001276 319139 NR_001276 ENSG00000207444 SNORD56B RNU56B small nucleolar RNA, C/D box 56B snoRNA 0.075697 0.734127 -151(CCGAGTCCCCGG,+,0.00),-26(GGGCCTTCCCGC,+,0.00) 41(CCCCCGGC,-,0.00) 69(CCTTCGGAGCCC,-,0.00) -100(GGCCGCCCCCGC,-,0.00) -95(CCCCCGCAGC,-,0.00) 561_WT_peak_6601 chr7 17979749 17980065 + 59 NA exon (NM_015132, exon 1 of 26) exon (NM_015132, exon 1 of 26) 224 NM_015132 23161 Hs.487648 NM_015132 HPRD:09418 SNX13 RGS-PX1 sorting nexin 13 protein-coding 0.079114 0.627760 -66(GGGCTGGCGCCG,-,0.00) 80(TCGGGCCG,+,0.00) 131(CGGTTTTA,-,0.00) -37(CAGGTAAA,+,0.00),135(TTTACTCG,-,0.00) -65(GGCTGGCGCCGG,-,0.00) -138(CGCTGCTCCTCG,-,0.00) 561_WT_peak_5065 chr3 40351329 40351499 + 58 NA promoter-TSS (NR_033965) promoter-TSS (NR_033965) -225 NR_033965 440952 Hs.660388 NR_033965 EIF1B-AS1 - EIF1B antisense RNA 1 ncRNA 0.070588 0.561404 -18(TCGCCGCC,+,0.00) -111(GGCGGGCCCCGC,-,0.00) 561_WT_peak_2248 chr14 62045533 62045761 + 58 NA intron (NR_039985, intron 1 of 2) L1MEg|LINE|L1 -8276 NR_110416 101927780 Hs.254789 NR_110416 ENSG00000250548 LOC101927780 - uncharacterized LOC101927780 ncRNA 0.008772 0.349345 561_WT_peak_4135 chr2 70475453 70475706 + 58 NA 5' UTR (NM_022037, exon 1 of 12) 5' UTR (NM_022037, exon 1 of 12) 200 NM_022037 7072 Hs.413123 NM_022037 HPRD:04626 TIA1 TIA-1|WDM TIA1 cytotoxic granule-associated RNA binding protein protein-coding 0.071146 0.633858 64(TCCGCCTCCTCC,+,0.00) 13(AAGCGGTT,+,0.00) -18(TCCCTGCCCT,+,0.00) -126(CGGGACGA,-,0.00) 16(CGGTTATG,-,0.00) -60(CTCCATGGCTGC,-,0.00) -41(GCGGCGGCGC,+,0.00) 561_WT_peak_5171 chr3 98282578 98282755 + 58 NA Intergenic Intergenic 29789 NM_000097 1371 Hs.476982 NM_000097 HPRD:00417 CPOX CPO|CPX|HCP coproporphyrinogen oxidase protein-coding 0.005650 0.337079 -131(AAGTGGTT,+,0.00) 561_WT_peak_7623 chrX 150565236 150565524 + 58 NA promoter-TSS (NM_001017980) promoter-TSS (NM_001017980) -277 NM_001017980 203547 Hs.58633 NM_001017980 HPRD:18578 VMA21 MEAX|XMEA VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) protein-coding 0.100694 0.685121 -57(GCGACCGA,+,0.00) 24(TGCGCGGC,-,0.00) -101(CTTCGCGG,+,0.00),-53(CCGAGACG,-,0.00) 112(GCCGCGGAGC,+,0.00) 561_WT_peak_2132 chr14 23340589 23340830 + 58 NA promoter-TSS (NM_014045) promoter-TSS (NM_014045) -251 NM_014045 26020 Hs.525232 NM_014045 HPRD:14311 LRP10 LRP9|MST087 low density lipoprotein receptor-related protein 10 protein-coding 0.033195 0.429752 561_WT_peak_2411 chr15 25684333 25684767 + 58 NA promoter-TSS (NM_000462) promoter-TSS (NM_000462) -375 NM_130839 7337 Hs.598862 NM_000462 HPRD:03375 UBE3A ANCR|AS|E6-AP|EPVE6AP|HPVE6A ubiquitin protein ligase E3A protein-coding 0.046083 0.595402 -99(CTCGGTCGCC,-,0.00) 104(AAGCCGCT,+,0.00),263(AGGCCTCT,+,0.00) -164(TCGCCGCC,+,0.00),164(TCGACCCC,+,0.00) -98(TCGGTCGC,-,0.00) 130(CGAGGCGG,+,0.00) 118(GCCCCCCAGC,-,0.00) 561_WT_peak_1739 chr12 57998374 57998560 + 58 NA promoter-TSS (NM_178502) promoter-TSS (NM_178502) 62 NM_001286245 196403 Hs.32374 NM_178502 HPRD:16842 DTX3 RNF154|deltex3 deltex 3, E3 ubiquitin ligase protein-coding 0.021505 0.598930 561_WT_peak_1469 chr11 107328283 107328534 + 58 NA intron (NM_152434, intron 1 of 17) intron (NM_152434, intron 1 of 17) 164 NM_152434 143884 Hs.212140 NM_152434 HPRD:13102 CWF19L2 - CWF19-like 2, cell cycle control (S. pombe) protein-coding 0.039841 0.500000 14(CATTCCGGGTCT,-,0.00) 75(AGCCGCCA,-,0.00) -87(GGGGTGAGTGGG,-,0.00) -23(CAAAACAG,+,0.00) -156(TTTACCGG,-,0.00) 1(ACCTCGGCCC,-,0.00) 561_WT_peak_3880 chr19 52511398 52511994 + 58 NA promoter-TSS (NM_198480) promoter-TSS (NM_198480) -213 NM_001199324 284370 Hs.368355 NM_198480 HPRD:15875 ZNF615 - zinc finger protein 615 protein-coding 0.058725 0.546064 -135(TCGGCCTCCTCA,+,0.00) -136(CTCGGCCTCC,-,0.00) -53(TCGTCGCC,+,0.00),162(GGCGTGGA,-,0.00) 271(CCGGCCGA,+,0.00) 354(TAGCTACG,-,0.00) 272(CGGCCGAGAGGG,-,0.00) -62(GCCGCGCC,+,0.00) 210(CCGCGACG,-,0.00) 561_WT_peak_4260 chr2 112812958 112813229 + 58 NA 5' UTR (NM_032824, exon 1 of 19) 5' UTR (NM_032824, exon 1 of 19) 293 NM_032824 84910 Hs.656298 NM_032824 HPRD:07867 TMEM87B - transmembrane protein 87B protein-coding 0.107011 0.735294 9(AGGCGTCT,+,0.00) -147(CCTGCCTCCCGG,+,0.00) 51(TCGCCGCC,+,0.00) -87(AAGCGCGAGCCC,+,0.00) -105(GCCTCTCCGCCC,+,0.00) 86(CGCCGCCGCCGC,-,0.00) 12(CGTCTCGG,+,0.00) 80(CTGCCACGCCGC,-,0.00) 561_WT_peak_3861 chr19 50180451 50180724 + 58 NA intron (NM_001207042, intron 1 of 7) CpG 178 NM_198318 3276 Hs.20521 NM_001536 HPRD:04257 PRMT1 ANM1|HCP1|HRMT1L2|IR1B4 protein arginine methyltransferase 1 protein-coding 0.091575 0.671533 -72(GGCAGCCGAG,+,0.00) -11(AGGCGGCT,+,0.00) -2(TGGGTCGG,-,0.00) 64(CCCCCGCC,-,0.00) -8(CGGCTTTG,-,0.00) -86(CGGGTGAA,+,0.00) -112(CTTGGCGG,+,0.00) -115(GGTCTTGGCGGC,-,0.00),-26(GCCGCCGTGGGC,+,0.00) 561_WT_peak_4204 chr2 95787363 95787593 + 58 NA intron (NM_031902, intron 1 of 11) CpG 276 NM_031902 64969 Hs.655259 NM_031902 HPRD:10099 MRPS5 MRP-S5|S5mt mitochondrial ribosomal protein S5 protein-coding 0.108696 0.757576 30(TCGGCCTCCGCC,+,0.00) 29(CTCGGCCTCC,-,0.00) -93(TCCCGGCCCG,+,0.00) -159(GCCGGGGG,+,0.00) -11(AGCGCGCA,+,0.00),22(GCCGCGCC,+,0.00) -150(CGCGGCTTCTCG,-,0.00) -64(GCGTCCCAGC,-,0.00) 561_WT_peak_1888 chr12 121471880 121472091 + 58 NA intron (NM_001261825, intron 1 of 3) intron (NM_001261825, intron 1 of 3) 5060 NM_001261825 8638 Hs.118633 NM_003733 HPRD:04473 OASL OASLd|TRIP-14|TRIP14|p59 OASL|p59-OASL|p59OASL 2'-5'-oligoadenylate synthetase-like protein-coding 0.009479 0.509434 -62(CCCTCAGAGCCC,+,0.00) 561_WT_peak_1601 chr12 12510095 12510390 + 58 NA promoter-TSS (NR_024061) promoter-TSS (NR_024061) 229 NM_058169 118426 Hs.720779 NM_058169 HPRD:17439 LOH12CR1 LOH1CR12 loss of heterozygosity, 12, chromosomal region 1 protein-coding 0.105085 0.702703 62(TCGCCCGCCGCC,+,0.00) -110(CGCGTGCG,+,0.00),-104(CGTTCGCG,-,0.00) 86(GCCCGGCCCG,+,0.00) 85(CGCCCGGC,-,0.00) -101(TCGCGCCG,+,0.00),120(CGGCACCA,-,0.00) -58(CTCCTTCTCCCG,-,0.00) -97(GCCGCGCC,+,0.00),-47(GCCGCCCA,+,0.00) 85(CGCCCGGCCCGC,-,0.00) -47(GCCGCCCAGGCC,+,0.00) 0(GCCTCGCTGC,-,0.00),5(GCTGCGGCGC,+,0.00) -45(CGCCCAGGCCCC,-,0.00) 561_WT_peak_1490 chr11 116706631 116706835 + 58 NA exon (NM_000039, exon 4 of 4) exon (NM_000039, exon 4 of 4) 1605 NM_000039 335 Hs.93194 NM_000039 HPRD:02517 APOA1 - apolipoprotein A-I protein-coding 0.132353 0.707317 -44(CGTCGCTG,+,0.00) -20(TGCGCAGC,-,0.00) -104(GTCTGGCGCCGC,-,0.00),-57(CGCTGGCGCAGC,-,0.00) -66(GCGGCCAAGC,+,0.00) 561_WT_peak_6420 chr6 106967319 106967811 + 58 NA exon (NM_001624, exon 2 of 20) exon (NM_001624, exon 2 of 20) 7835 NM_001624 202 Hs.724262 NM_001624 HPRD:18576 AIM1 CRYBG1|ST4 absent in melanoma 1 protein-coding 0.010163 0.470588 -138(CGTCTCGG,+,0.00) 561_WT_peak_5650 chr4 186064017 186064297 + 58 NA promoter-TSS (NM_001151) promoter-TSS (NM_001151) -260 NM_001151 291 Hs.246506 NM_001151 HPRD:00058 SLC25A4 1|AAC1|ANT|ANT 1|ANT1|MTDPS12|PEO2|PEO3|T1 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 protein-coding 0.092857 0.672598 -86(CGGCCCGGTGTC,+,0.00) 77(CCTCGCTCCCGG,+,0.00) 65(CCCCCGGC,-,0.00) 66(CCCCGGCCCAGC,-,0.00) -135(AGCGCGGCCC,-,0.00),-32(TACGCGGCCC,-,0.00) -67(GCTTCGCCCC,-,0.00) 561_WT_peak_5134 chr3 57583429 57583879 + 58 NA promoter-TSS (NM_001660) promoter-TSS (NM_001660) -439 NM_001660 378 Hs.652183 NM_001660 HPRD:03107 ARF4 ARF2 ADP-ribosylation factor 4 protein-coding 0.053333 0.485588 -28(AGACGCTT,-,0.00),24(AAGTGGTT,+,0.00),83(AGACGCTT,-,0.00),268(AAGCCTCT,+,0.00) -86(GGTACGCG,-,0.00) 561_WT_peak_6109 chr6 15023741 15023933 + 58 NA Intergenic Intergenic -222369 NM_004973 3720 Hs.269059 NM_004973 HPRD:03355 JARID2 JMJ jumonji, AT rich interactive domain 2 protein-coding 0.015625 0.481865 561_WT_peak_7600 chrX 106959886 106960193 + 58 NA promoter-TSS (NM_001015881) promoter-TSS (NM_001015881) 252 NM_004089 1831 Hs.522074 NM_004089 HPRD:04266 TSC22D3 DIP|DSIPI|GILZ|TSC-22R|hDIP TSC22 domain family, member 3 protein-coding 0.061889 0.646104 113(GGAGCGGGGCGA,-,0.00) 94(GAGTCCGGCCCT,-,0.00) 24(TCGTGCGG,+,0.00) 35(TGGGCGGC,-,0.00),43(TGGGCGGC,-,0.00) -147(CTGGGGCCAGCG,+,0.00) 561_WT_peak_7553 chrX 53710559 53710876 + 58 NA intron (NM_031407, intron 2 of 83) CpG 2957 NM_031407 10075 Hs.136905 NM_031407 HPRD:06608 HUWE1 ARF-BP1|HECTH9|HSPC272|Ib772|LASU1|MULE|URE-B1|UREB1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase protein-coding 0.082019 0.628931 20(TCAGCCTCCGCC,+,0.00) 25(CTCCGCCGCC,-,0.00) -90(CCGGCACCCCGG,+,0.00) 49(CGGACCGA,+,0.00) -94(TTTACCGG,-,0.00) 0(GGGTCCTGGCCG,+,0.00) 561_WT_peak_1468 chr11 105948659 105948844 + 58 NA promoter-TSS (NM_152433) promoter-TSS (NM_152433) -286 NM_198439 143879 Hs.101949 NM_152433 HPRD:10005 KBTBD3 BKLHD3 kelch repeat and BTB (POZ) domain containing 3 protein-coding 0.113514 0.704301 -148(CGGGCCGGGC,-,0.00) -117(CGCTGGCCGCGA,-,0.00) -147(GGGCCGGGCT,+,0.00) 2(GCCGCGATGGCT,+,0.00) -98(GCTGTGGAGC,+,0.00) 561_WT_peak_2787 chr16 30670280 30670582 + 58 NA Intergenic CpG -5347 NM_001105079 64319 Hs.247186 NM_022452 HPRD:16354 FBRS FBS|FBS1 fibrosin protein-coding 0.056291 0.607261 -18(GCTTTCGGCCCC,-,0.00) 65(CTAGGCCGCC,-,0.00) -55(AGACACTT,-,0.00) 36(TCGACCCC,+,0.00) 98(GGGGCCGGGA,-,0.00) 71(CGCCGGAC,+,0.00) 561_WT_peak_7565 chrX 64254828 64255008 + 58 NA promoter-TSS (NM_001178032) promoter-TSS (NM_001178032) -294 NM_001243804 55906 Hs.28249 NM_018684 HPRD:06584 ZC4H2 HCA127|KIAA1166|WRWF|WWS zinc finger, C4H2 domain containing protein-coding 0.077778 0.690608 -92(GAGCGCCTTCCC,+,0.00) -79(CCATCGCCTCCC,-,0.00) -99(GCTGGGCGAGCG,+,0.00),-35(GCGGCGCCACGG,+,0.00) 561_WT_peak_517 chr1 150551705 150552214 + 58 NA exon (NM_182763, exon 1 of 2) exon (NM_182763, exon 1 of 2) 255 NM_182763 4170 Hs.632486 NM_021960 HPRD:08870 MCL1 BCL2L3|EAT|MCL1-ES|MCL1L|MCL1S|Mcl-1|TM|bcl2-L-3|mcl1/EAT myeloid cell leukemia 1 protein-coding 0.108055 0.660784 -101(GGCGGCCGCG,+,0.00) 36(TCGCCCTCCCGG,+,0.00) -116(TCGGCGCC,+,0.00),144(TCGCCGCC,+,0.00) 255(GTCCTACG,-,0.00) 238(CGGTTTTA,-,0.00) -106(TGGGCGGC,-,0.00),-29(ACCGCGCC,+,0.00) 145(CGCCGCCGCCGC,-,0.00),265(GTGGCGCCAGCG,+,0.00) 55(GCGCCGCCGC,-,0.00) 152(GCCGCCTGGCTG,+,0.00) 561_WT_peak_6665 chr7 45018579 45019015 + 58 NA promoter-TSS (NM_033054) promoter-TSS (NM_033054) -93 NM_033054 64005 Hs.37617 NM_033054 HPRD:17622 MYO1G HA2|HLA-HA2|MHAG myosin IG protein-coding 0.036697 0.620137 -73(CCAGCCTCCTCC,+,0.00) 101(GGGGCCGGATGC,+,0.00) -89(CCCCCGCC,-,0.00) 32(GCTTCCTGTCCC,-,0.00) -87(CCCGCCCTGCCC,+,0.00) 561_WT_peak_7633 chrX 154493595 154493889 + 58 NA 5' UTR (NM_171998, exon 1 of 2) 5' UTR (NM_171998, exon 1 of 2) 132 NM_171998 116442 Hs.632832 NM_171998 HPRD:06703 RAB39B MRX72 RAB39B, member RAS oncogene family protein-coding 0.105442 0.667797 90(CTGGGCCGCC,-,0.00) -152(CGGGGACGGCGG,-,0.00),-35(CCGGGAGAGCGG,-,0.00) -126(CCGACGCC,+,0.00),83(GCGACGCC,+,0.00) -103(CGGCAGGA,-,0.00) -153(CCGGGGACGGCG,+,0.00) -110(CGCGGCTCGGCA,-,0.00),74(CGCGTAGACGCG,+,0.00) 73(CCGCGTAG,-,0.00) -109(GCGGCTCGGCAG,+,0.00) 561_WT_peak_412 chr1 120612054 120612423 + 58 NA promoter-TSS (NM_001200001) promoter-TSS (NM_001200001) 79 NM_001200001 4853 Hs.487360 NM_024408 HPRD:02606 NOTCH2 AGS2|HJCYS|hN2 notch 2 protein-coding 0.108401 0.708108 -10(CTCGGCCGCC,-,0.00),2(CTCAGCCGCC,-,0.00),74(CTCAGCCGCC,-,0.00) 77(AGCCGCCT,-,0.00) -40(TCGACTCC,+,0.00) 166(AAGCGCCGGCCC,+,0.00) 10(CCGCCCGA,+,0.00) 172(CGGCCCGA,-,0.00) -21(GTCCGCCG,-,0.00) 135(CCTTGGGCACCC,-,0.00) 93(CGCAAGCCCCGC,-,0.00),121(CCTCGGCCCCGC,-,0.00) -18(CGCCGCTCCTCG,-,0.00) 97(AGCCCCGCCC,-,0.00) 131(GCCGCCTTGGGC,+,0.00) -65(GCTCCGAAGC,+,0.00),126(GCCCCGCCGC,-,0.00) 561_WT_peak_3789 chr19 45004716 45004956 + 58 NA promoter-TSS (NM_001278508) promoter-TSS (NM_001278508) -261 NM_001278509 7733 Hs.22305 NM_013256 ZNF180 HHZ168 zinc finger protein 180 protein-coding 0.079167 0.663900 -83(GGAGGCCGAG,+,0.00) -149(CCGGGGGGGCGC,-,0.00),-86(CCGGGAGGCCGA,-,0.00) -66(CAGCGACG,-,0.00) 16(GTCAGACG,-,0.00) -156(CCGGGGCCCGGG,+,0.00) -93(CGCGGCGCCGGG,+,0.00),-93(CGCGGCGCCGGG,-,0.00) -67(GCAGCGACGC,+,0.00) 561_WT_peak_70 chr1 15906029 15906219 + 58 NA intron (NM_024758, intron 3 of 6) intron (NM_024758, intron 3 of 6) 5481 NM_024758 79814 Hs.461532 NM_024758 AGMAT - agmatine ureohydrolase (agmatinase) protein-coding 0.010526 0.507853 -118(CCACCCTCCACC,+,0.00) 15(GCCTCTCAGC,-,0.00) 561_WT_peak_2094 chr13 108870534 108870767 + 58 NA promoter-TSS (NM_032859) promoter-TSS (NM_032859) 66 NM_001098268 3981 Hs.166091 NM_002312 HPRD:03500 LIG4 LIG4S ligase IV, DNA, ATP-dependent protein-coding 0.090129 0.688034 -87(GGAGGAGGGTGG,-,0.00) 19(AGCGGCTT,-,0.00) -119(CGGGTACG,+,0.00) -1(CGTCGCGG,+,0.00) 561_WT_peak_5486 chr4 52710837 52711123 + 58 NA intron (NM_001287755, intron 1 of 10) CpG 1235 NM_001287755 23142 Hs.605388 NM_015115 HPRD:13791 DCUN1D4 - DCN1, defective in cullin neddylation 1, domain containing 4 protein-coding 0.097902 0.662021 -37(CGCCCGGC,-,0.00) -143(GTGCTGGGAGGG,-,0.00) -41(GCCGCGCC,+,0.00),82(TGCGCGCT,-,0.00) 561_WT_peak_3495 chr18 44497272 44497452 + 58 NA 5' UTR (NM_004671, exon 1 of 14) 5' UTR (NM_004671, exon 1 of 14) 133 NM_173206 9063 Hs.657844 NM_004671 HPRD:06944 PIAS2 ARIP3|DIP|MIZ|MIZ1|PIASX|PIASX-ALPHA|PIASX-BETA|SIZ2|ZMIZ4 protein inhibitor of activated STAT, 2 protein-coding 0.155556 0.723757 -53(CACGGCCGCC,-,0.00),0(CGCGGCCGCC,-,0.00) 9(CGCCGCTA,+,0.00) -116(CGCGGGCGCCGC,-,0.00),-110(CGCCGCCGCCGC,-,0.00),-101(CGCTGCCGCCGC,-,0.00) -111(GCGCCGCCGC,-,0.00) 561_WT_peak_90 chr1 19923837 19924187 + 58 NA intron (NM_001204089, intron 1 of 3) intron (NM_001204089, intron 1 of 3) 541 NM_001204082 440574 Hs.466662 NM_001032363 ENSG00000173436 MINOS1 C1orf151|MIO10 mitochondrial inner membrane organizing system 1 protein-coding 0.057143 0.595442 -31(AACCGGCT,+,0.00) -80(GCCGCGGG,+,0.00) -90(TCGTGCCG,+,0.00),-46(CGGCACGC,-,0.00) -86(GCCGGAGCCGCG,+,0.00),-13(CGCTGCTCCCCG,-,0.00) 561_WT_peak_5552 chr4 95128892 95129213 + 58 NA promoter-TSS (NM_001128429) promoter-TSS (NM_001128429) 56 NM_020159 56916 Hs.410406 NM_020159 HPRD:11586 SMARCAD1 ADERM|ETL1|HEL1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein-coding 0.077882 0.614907 -47(TCGCGCCG,+,0.00) 561_WT_peak_6324 chr6 42532076 42532101 + 58 NA exon (NM_015255, exon 1 of 47) exon (NM_015255, exon 1 of 47) 328 NM_001184801 23304 Hs.529925 NM_015255 HPRD:09853 UBR2 C6orf133|bA49A4.1|dJ242G1.1|dJ392M17.3 ubiquitin protein ligase E3 component n-recognin 2 protein-coding 0.080000 0.692308 561_WT_peak_1067 chr10 76995595 76995882 + 58 NA promoter-TSS (NM_144589) promoter-TSS (NM_144589) 32 NM_144589 118881 Hs.355333 NM_144589 HPRD:08678 COMTD1 - catechol-O-methyltransferase domain containing 1 protein-coding 0.111498 0.739583 -69(GCGGGCAGGAGG,-,0.00) -31(GAGCTGGAGCTC,-,0.00) 93(CCGCCCGA,+,0.00) 105(GCCGGGCG,+,0.00) -121(CCAGGGCCAGCG,+,0.00) 38(CGCGGAGCCGCG,+,0.00),38(CGCGGAGCCGCG,-,0.00) 89(AGCCCCGCCC,-,0.00) 21(CTTGTCGG,+,0.00) -150(GGCGAAGGCGGC,-,0.00),-117(GGCCAGCGCGGC,-,0.00),-78(GGTCATGGCGCG,-,0.00) 561_WT_peak_390 chr1 113498453 113498655 + 58 NA promoter-TSS (NR_103744) promoter-TSS (NR_103744) 131 NM_001166496 6566 Hs.75231 NM_003051 HPRD:02816 SLC16A1 HHF7|MCT|MCT1 solute carrier family 16 (monocarboxylate transporter), member 1 protein-coding 0.089109 0.704433 -75(CCTCCCTCCGCC,+,0.00) -83(CTGGGCCGCC,-,0.00) 12(GCGTGCCG,+,0.00) -18(GGGCAGCGAGGG,-,0.00) -124(GTCCGAGG,-,0.00) 561_WT_peak_6336 chr6 43603420 43603617 + 58 NA promoter-TSS (NM_014628) promoter-TSS (NM_014628) -59 NM_014628 9587 Hs.122346 NM_014628 HPRD:10065 MAD2L1BP CMT2 MAD2L1 binding protein protein-coding 0.081218 0.601010 -86(GCGACGCC,+,0.00) -67(CCGACCCA,+,0.00) -81(GCCGCGCC,+,0.00) -89(GCGGCGACGC,+,0.00) 561_WT_peak_3933 chr19 58858709 58858888 + 58 NA exon (NM_130786, exon 7 of 8) exon (NM_130786, exon 7 of 8) -4538 NR_015380 503538 Hs.709582 NR_015380 ENSG00000268895 A1BG-AS1 A1BG-AS|A1BGAS|NCRNA00181 A1BG antisense RNA 1 ncRNA 0.106145 0.688889 -10(CCGTCTTCACGG,+,0.00) 2(CCTTCGTCTCGC,-,0.00) -30(CGCGGCCCCGGG,-,0.00) 561_WT_peak_6735 chr7 76751628 76751825 + 58 NA promoter-TSS (NM_020879) promoter-TSS (NM_020879) -208 NM_020879 57639 Hs.113940 NM_020879 HPRD:11150 CCDC146 - coiled-coil domain containing 146 protein-coding 0.060914 0.570707 -103(GGCCGACG,-,0.00) -9(CGGGTAAG,+,0.00) 561_WT_peak_925 chr10 27530507 27530818 + 58 NA promoter-TSS (NM_145698) promoter-TSS (NM_145698) 406 NR_073195 91452 Hs.530597 NM_145698 HPRD:12415 ACBD5 - acyl-CoA binding domain containing 5 protein-coding 0.048232 0.538462 6(GGCGTAGA,-,0.00) 13(AGGGCGGGGC,-,0.00) 5(GGGCGTAGAGGG,-,0.00) 561_WT_peak_3085 chr17 25871690 25871947 + 58 NA intron (NM_014238, intron 2 of 20) intron (NM_014238, intron 2 of 20) 72782 NM_014238 8844 Hs.133534 NM_014238 KSR1 KSR|RSU2 kinase suppressor of ras 1 protein-coding 0.019455 0.519380 -31(AGGGCTGGGC,-,0.00) -89(CGGTTTTG,-,0.00) 561_WT_peak_2266 chr14 69261002 69261638 + 58 NA promoter-TSS (NM_004926) promoter-TSS (NM_004926) -689 NM_001244698 677 Hs.85155 NM_004926 HPRD:03041 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein-like 1 protein-coding 0.067610 0.540031 92(CTCCGCCGCC,-,0.00),138(GGCCGCCGAG,+,0.00) 373(AACCGGCT,+,0.00) 134(TCGAGGCC,+,0.00) 101(CCCCCTCGGCCC,+,0.00) -141(CCGTTTTG,-,0.00),-102(CGAAACCG,+,0.00) -31(GCCGCCCA,+,0.00) 86(CGCGGGCTCCGC,-,0.00) 91(GCTCCGCCGC,-,0.00) 561_WT_peak_4770 chr21 34100505 34100701 + 58 NA promoter-TSS (NM_001160302) promoter-TSS (NM_001160302) 178 NR_038879 100506215 Hs.657123 NR_038879 ENSG00000238197 PAXBP1-AS1 GCFC1-AS1 PAXBP1 antisense RNA 1 ncRNA 0.071429 0.695431 11(CCGCCCCCACGG,+,0.00) -137(GCCGGGGG,+,0.00) 561_WT_peak_4245 chr2 106363041 106363233 + 58 NA intron (NM_001004722, intron 1 of 3) intron (NM_001004722, intron 1 of 3) 1617 NM_001004722 8440 Hs.529244 NM_003581 HPRD:05378 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding 0.031250 0.445596 -125(CATCGGAC,+,0.00) 561_WT_peak_105 chr1 24306243 24306876 + 58 NA intron (NM_001300936, intron 1 of 5) CpG 394 NM_001191009 10772 Hs.3530 NM_006625 HPRD:05562 SRSF10 FUSIP1|FUSIP2|NSSR|PPP1R149|SFRS13|SFRS13A|SRp38|SRrp40|TASR|TASR1|TASR2 serine/arginine-rich splicing factor 10 protein-coding 0.105845 0.667192 40(GGGGGAGGGGGA,-,0.00) 246(AGGCCCGGAGTA,+,0.00) 110(GGCGGCTGAG,+,0.00),397(GGCGGCCGAG,+,0.00) 232(CGGCCTCCCCGC,+,0.00) 139(TCGGCGCC,+,0.00) 384(CGTCCGCG,-,0.00) 353(TCGGCCGG,-,0.00) -17(GGCGGGGG,+,0.00),186(CCCCCGGC,-,0.00),356(GCCGGGCG,+,0.00) -4(TCGCGCCG,+,0.00),2(CGGCAGGA,-,0.00) 281(CGTCGGCC,+,0.00) 126(TGCGCGGC,-,0.00) 155(CGCGGGACCCGC,-,0.00) 68(CGCGGCCCGGCG,-,0.00) 66(CACGCGGCCC,-,0.00),88(GGCGCCGCCC,-,0.00) 62(CCGCCACG,-,0.00),240(CCGCCTAG,-,0.00) -94(GGCCAAGGGGGC,-,0.00),333(GGACATGGCGGC,-,0.00) 124(GCTGCGCGGC,+,0.00) 561_WT_peak_3949 chr2 3605636 3605947 + 58 NA promoter-TSS (NR_038431) promoter-TSS (NR_038431) 170 NM_001286834 246243 Hs.568006 NM_002936 HPRD:04989 RNASEH1 H1RNA|RNH1 ribonuclease H1 protein-coding 0.125402 0.724359 6(GGCGGCCAAG,+,0.00) -113(CCGGCAGGGAGG,-,0.00) -125(TCGACCCC,+,0.00),78(TCGACTCC,+,0.00) 83(TCCCGGCCCA,+,0.00) -61(CGGTCTTG,-,0.00),117(CAACACCG,+,0.00) -9(GCGGCGGCAGGG,+,0.00) 0(GGGCAAGGCGGC,-,0.00),7(GCGGCCAAGGCG,+,0.00),9(GGCCAAGGCGAC,-,0.00) 561_WT_peak_5371 chr3 196466638 196467018 + 58 NA promoter-TSS (NM_002577) promoter-TSS (NM_002577) 100 NM_002577 5062 Hs.518530 NM_002577 HPRD:05428 PAK2 PAK65|PAKgamma p21 protein (Cdc42/Rac)-activated kinase 2 protein-coding 0.126316 0.779528 46(CTCCGCCGCC,-,0.00) -163(GAGGTGGCGCTC,-,0.00),142(GCGCGCTAGCCC,+,0.00) 182(CTGACCGA,+,0.00) 14(TCCCTCCCCT,+,0.00),118(TCCCTCCCCT,+,0.00) -5(CGTCGCCA,+,0.00) -104(TTCTGGCCCCGC,-,0.00) -48(CGCGCAGCGGCG,+,0.00),156(GGCGGCTCCGCA,-,0.00) -4(GTCGCCATTGCC,+,0.00) 160(GCTCCGCAGC,-,0.00) 561_WT_peak_5747 chr5 53942152 53942339 + 58 NA Intergenic Intergenic 56907 NR_104659 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA 0.037433 0.542553 -12(AGCCGCAT,-,0.00),11(AGAGGCTT,-,0.00) -109(GAAACAGAAAGA,+,0.00) 561_WT_peak_5691 chr5 36241973 36242162 + 58 NA promoter-TSS (NM_001287340) promoter-TSS (NM_001287340) -167 NM_001085411 133686 Hs.81907 NM_153013 HPRD:08088 NADK2 C5orf33|MNADK|NADKD1 NAD kinase 2, mitochondrial protein-coding 0.121693 0.689474 -69(GGCGTTGA,-,0.00) -163(CGTCCGCG,-,0.00) -153(GCCCGGGCCT,+,0.00) -137(TCGCGCCG,+,0.00) -134(CGCCGGAC,+,0.00) -55(CGGGGAAA,+,0.00) -56(GCGGGGAAAGCG,+,0.00) -156(GCCGCCCGGGCC,+,0.00) 561_WT_peak_3704 chr19 24097798 24097972 + 58 NA intron (NM_001244038, intron 1 of 3) intron (NM_001244038, intron 1 of 3) 201 NM_001244038 730087 Hs.655305 NM_001190829 ZNF726 - zinc finger protein 726 protein-coding 0.068966 0.634286 -6(TGGCGGCT,+,0.00) -126(CGGGGCTGGCTG,+,0.00) 561_WT_peak_3842 chr19 49361960 49362134 + 58 NA intron (NM_020904, intron 8 of 19) intron (NM_020904, intron 8 of 19) 9837 NM_020904 57664 Hs.9469 NM_020904 HPRD:09683 PLEKHA4 PEPP1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 protein-coding 0.011494 0.537143 561_WT_peak_6939 chr8 21771117 21771367 + 58 NA promoter-TSS (NM_003974) promoter-TSS (NM_003974) -37 NM_003974 9046 Hs.71215 NM_003974 HPRD:05411 DOK2 p56DOK|p56dok-2 docking protein 2, 56kDa protein-coding 0.020000 0.454183 561_WT_peak_1914 chr12 124118267 124118476 + 58 NA promoter-TSS (NM_001516) promoter-TSS (NM_001516) -48 NM_001414 1967 Hs.741273 NM_001414 EIF2B1 EIF2B|EIF2BA eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa protein-coding 0.086124 0.657143 15(GACTCCGGGGCT,-,0.00) 13(TCGACTCC,+,0.00) 35(TCGGTCCG,-,0.00) -139(TGGCACGA,-,0.00) -102(CGCCGGAC,+,0.00) -89(GCTGCGCA,+,0.00) -110(CTTGGCGG,+,0.00) 21(GGGGCTCGGCTG,+,0.00) 561_WT_peak_3712 chr19 29703880 29704094 + 58 NA exon (NM_006003, exon 1 of 2) exon (NM_006003, exon 1 of 2) 149 NM_006003 7386 Hs.743307 NM_006003 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding 0.126168 0.725581 -133(CCGGGGTGGCGG,-,0.00),-88(CCGCCACCCCGC,+,0.00) -54(CGCGAACG,+,0.00) -46(GGCCTGAGCGGG,-,0.00) -162(GGGCCGCTTC,+,0.00) -1(CCGCCAAG,-,0.00) -1(CCGCCAAGCCGG,-,0.00) 561_WT_peak_6540 chr6 159271254 159271373 + 58 NA intron (NR_028496, intron 2 of 2) intron (NR_028496, intron 2 of 2) 7351 NR_028496 202459 Hs.487035 NM_145303 HPRD:14130 OSTCP1 DC2L|OSTCL oligosaccharyltransferase complex subunit pseudogene 1 pseudo 0.016807 0.466667 561_WT_peak_7441 chr9 131218779 131219103 + 58 NA promoter-TSS (NM_153437) promoter-TSS (NM_153437) -245 NM_153437 4957 Hs.129055 NM_002540 HPRD:03601 ODF2 CT134|ODF2/1|ODF2/2|ODF84 outer dense fiber of sperm tails 2 protein-coding 0.092593 0.707692 -156(CTCTGCCGCC,-,0.00) 127(GGCGTCTA,-,0.00) -63(CCGACAGA,+,0.00),-17(CCGACCGC,+,0.00) 87(CGCCCGGC,-,0.00),92(GGCGGGGG,+,0.00) 115(CCCTCCCAGCCC,+,0.00) 83(CCCTCGCCCGGC,-,0.00) -13(CCGCCTCG,-,0.00) 561_WT_peak_2869 chr16 67063324 67063674 + 58 NA intron (NM_022845, intron 1 of 5) CpG 449 NM_022845 865 Hs.460988 NM_001755 HPRD:00418 CBFB PEBP2B core-binding factor, beta subunit protein-coding 0.125714 0.700855 117(GATTTCGGGCCG,-,0.00) -90(GCGGGCGGGCGG,-,0.00),74(CTGGGAGGGCGG,-,0.00) 80(GGGCGGGCGCGC,-,0.00) -7(CCGGTCGG,-,0.00) -27(CGGCACGG,-,0.00),121(TCGGGCCG,+,0.00) 71(GCGCTGGGAGGG,-,0.00) 103(CGGATTTG,-,0.00) -31(TGGGCGGC,-,0.00) 89(CGCGGGCGGCGC,-,0.00) -119(AGCTGAGCCGCG,+,0.00),93(GGCGGCGCCGCG,+,0.00),93(GGCGGCGCCGCG,-,0.00) 92(GGGCGGCGCC,+,0.00) 30(GCGGCCATCGCC,+,0.00) 561_WT_peak_6775 chr7 99942259 99942331 + 58 NA intron (NR_036569, intron 3 of 17) intron (NR_036569, intron 3 of 17) -7646 NR_103728 101752334 Hs.521075 NR_103728 PVRIG2P - poliovirus receptor related immunoglobulin domain containing 2, pseudogene pseudo 0.000000 0.657534 561_WT_peak_7235 chr9 26947618 26947770 + 58 NA promoter-TSS (NM_001031689) promoter-TSS (NM_001031689) -226 NM_001031689 9373 Hs.27182 NM_004253 HPRD:04850 PLAA DOA1|PLA2P|PLAP phospholipase A2-activating protein protein-coding 0.019737 0.379085 561_WT_peak_1627 chr12 24992284 24992540 + 58 NA intron (NM_005504, intron 7 of 10) intron (NM_005504, intron 7 of 10) 62910 NM_001178094 586 Hs.438993 NM_005504 HPRD:00216 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino-acid transaminase 1, cytosolic protein-coding 0.007812 0.439689 -139(CAATACCG,+,0.00) 561_WT_peak_5243 chr3 127872075 127872245 + 58 NA promoter-TSS (NM_021937) promoter-TSS (NM_021937) -153 NM_021937 60678 Hs.477498 NM_021937 HPRD:07409 EEFSEC EFSEC|SELB eukaryotic elongation factor, selenocysteine-tRNA-specific protein-coding 0.070588 0.654971 -16(GCTTCCGGGCCG,-,0.00) -138(AGAGGCTT,-,0.00) 561_WT_peak_7058 chr8 77912431 77912601 + 58 NA promoter-TSS (NM_000318) promoter-TSS (NM_000318) 8 NM_001079867 5828 Hs.437966 NM_000318 HPRD:01367 PEX2 PAF1|PBD5A|PBD5B|PMP3|PMP35|PXMP3|RNF72|ZWS3 peroxisomal biogenesis factor 2 protein-coding 0.111765 0.643275 -146(CGCGAACG,+,0.00) -127(AAGAGCCGAAGG,+,0.00) -138(CCGACAAG,-,0.00) 561_WT_peak_6324-2 chr6 42532155 42532246 + 58 NA intron (NM_001184801, intron 1 of 11) CpG 440 NM_001184801 23304 Hs.529925 NM_015255 HPRD:09853 UBR2 C6orf133|bA49A4.1|dJ242G1.1|dJ392M17.3 ubiquitin protein ligase E3 component n-recognin 2 protein-coding 0.087912 0.706522 -96(CCGACCCA,+,0.00) -151(CCCTCGCAGGCC,+,0.00) -142(GCCGCGCC,+,0.00) -147(CGCAGGCCGCGC,-,0.00) 561_WT_peak_1791 chr12 90256734 90257000 + 58 NA Intergenic Intergenic 154135 NR_028138 338758 Hs.601766 NR_028138 ENSG00000271614 LINC00936 - long intergenic non-protein coding RNA 936 ncRNA 0.011278 0.460674 27(AGAGGCCT,-,0.00) -139(AGTTCCTGTTTC,-,0.00),-117(GAAGCAGGAAGA,+,0.00) 561_WT_peak_7133 chr8 124934690 124934891 + 58 NA intron (NM_001039112, intron 1 of 40) intron (NM_001039112, intron 1 of 40) 70563 NM_001039112 654463 Hs.632058 NM_001039112 ENSG00000214814 FER1L6 C8ORFK23 fer-1-like family member 6 protein-coding 0.034826 0.594059 7(CCGTGGGCTCCC,-,0.00) 561_WT_peak_7518 chrX 30731356 30731603 + 58 NA intron (NM_001128127, intron 12 of 19) intron (NM_001128127, intron 12 of 19) 60003 NM_001128127 2710 Hs.1466 NM_000167 HPRD:08363 GK GK1|GKD glycerol kinase protein-coding 0.008097 0.407258 561_WT_peak_4656 chr20 46086299 46086576 + 58 NA Intergenic Intergenic -44164 NM_001174087 8202 Hs.592142 NM_006534 HPRD:03570 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding 0.003610 0.377698 -48(GAATTAGGAAGC,+,0.00) 561_WT_peak_7596 chrX 101854479 101854734 + 58 NA 5' UTR (NM_022838, exon 1 of 3) 5' UTR (NM_022838, exon 1 of 3) 180 NM_001168478 64860 Hs.522729 NM_022838 HPRD:06521 ARMCX5 GASP5 armadillo repeat containing, X-linked 5 protein-coding 0.050980 0.507812 -30(AAGCGGTT,+,0.00) -97(GGAACAGGAAGG,+,0.00) 24(GCCGCCATTGCC,+,0.00) 561_WT_peak_3889 chr19 54605760 54605955 + 58 NA promoter-TSS (NM_004542) promoter-TSS (NM_004542) 137 NM_001282349 126014 Hs.347655 NM_130771 HPRD:06035 OSCAR PIGR3|PIgR-3 osteoclast associated, immunoglobulin-like receptor protein-coding 0.046154 0.515306 -47(AGCGACTT,-,0.00) 561_WT_peak_5611 chr4 146402704 146402877 + 58 NA promoter-TSS (NM_005900) promoter-TSS (NM_005900) -161 NM_005900 4086 Hs.604588 NM_005900 HPRD:03356 SMAD1 BSP-1|BSP1|JV4-1|JV41|MADH1|MADR1 SMAD family member 1 protein-coding 0.127168 0.712644 -27(CGGGCCGGGA,-,0.00) -125(AGGAAGAAACGG,+,0.00) -60(CTCCGGCCCCGG,-,0.00),-54(CCCCGGCCGCGC,-,0.00) -76(GCTCCCCCGC,-,0.00) -31(CGGCCGGGCCGG,-,0.00) 561_WT_peak_4046 chr2 43386127 43386511 + 58 NA Intergenic Intergenic 67426 NM_006887 678 Hs.503093 NM_006887 HPRD:18319 ZFP36L2 BRF2|ERF-2|ERF2|RNF162C|TIS11D ZFP36 ring finger protein-like 2 protein-coding 0.028646 0.566234 -105(TCCACGCC,+,0.00) -122(GGGTTGGCCCTC,-,0.00) 159(TAGCGAGG,-,0.00) 561_WT_peak_4153 chr2 74710242 74710540 + 58 NA promoter-TSS (NM_032779) promoter-TSS (NM_032779) -34 NM_032779 84865 Hs.430199 NM_032779 CCDC142 - coiled-coil domain containing 142 protein-coding 0.050336 0.595318 102(GAATTCGGTCCA,-,0.00) 73(AGGTCGCT,+,0.00) 17(CGAGGCTCCGCC,-,0.00) 561_WT_peak_1111 chr10 99094811 99094996 + 58 NA promoter-TSS (NM_012083) promoter-TSS (NM_012083) -445 NM_012083 23401 Hs.140720 NM_012083 HPRD:05419 FRAT2 - frequently rearranged in advanced T-cell lymphomas 2 protein-coding 0.118919 0.655914 -78(GGCTTCGA,-,0.00) -152(CCGCCCGA,+,0.00) -121(TCCCGGCCCT,+,0.00),-100(AGGGGCGGGC,-,0.00) -89(GCCGCGGG,+,0.00) -26(CGGCACGT,-,0.00) -60(CGGGGAAA,+,0.00) -137(CCCGCGCA,+,0.00) -144(CTCCCGCCCCGC,-,0.00) -70(CGAGGCGG,+,0.00) 561_WT_peak_6827 chr7 117928297 117928480 + 58 NA Intergenic L1M3b|LINE|L1 63676 NM_019644 56311 Hs.729340 NM_019644 ENSG00000106013 ANKRD7 TSA806 ankyrin repeat domain 7 protein-coding 0.000000 0.358696 -135(ACAACAGGAAGC,+,0.00) 561_WT_peak_3631 chr19 12724633 12724825 + 58 NA intron (NM_153358, intron 1 of 3) intron (NM_153358, intron 1 of 3) 2997 NM_153358 163049 Hs.720677 NM_153358 HPRD:08295 ZNF791 - zinc finger protein 791 protein-coding 0.010417 0.440415 561_WT_peak_4521 chr2 241075451 241075622 + 58 NA intron (NM_001163424, intron 1 of 2) CpG 211 NM_001163424 150678 Hs.293884 NM_138336 HPRD:17306 MYEOV2 - myeloma overexpressed 2 protein-coding 0.116959 0.755814 -69(TCCCCTCCCCGG,+,0.00),-26(CCCCCTTCCCCG,+,0.00) -163(TCGCCGCC,+,0.00) -78(CGCCCGGC,-,0.00) -35(CCTTCCGCTCCC,-,0.00) -97(GCCGCGCC,+,0.00),-55(CCCGCGCA,+,0.00) -103(CTGGGAGCCGCG,+,0.00) -43(GACGCCGCCC,-,0.00) 561_WT_peak_1653 chr12 39836597 39836865 + 58 NA exon (NM_001173465, exon 1 of 34) exon (NM_001173465, exon 1 of 34) 461 NM_001173463 55605 Hs.374201 NM_017641 HPRD:10506 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding 0.130597 0.762082 -133(AGGTCGCT,+,0.00) 75(GCCGCGGG,+,0.00) 30(TCGAGCCG,+,0.00) -84(GCCGCGCC,+,0.00) -112(CGGTGCTCCGCG,-,0.00) 561_WT_peak_4420 chr2 198063749 198063961 + 58 NA intron (NM_001195144, intron 1 of 27) intron (NM_001195144, intron 1 of 27) 103388 NR_046837 101927547 Hs.687027 NR_046837 ANKRD44-IT1 - ANKRD44 intronic transcript 1 (non-protein coding) ncRNA 0.018868 0.464789 -18(AGGTTTTG,-,0.00) 561_WT_peak_5283 chr3 142720366 142720610 + 58 NA promoter-TSS (NR_034032) promoter-TSS (NR_034032) 116 NM_001080415 23350 Hs.596572 NM_001080415 ENSG00000163714 U2SURP SR140|fSAPa U2 snRNP-associated SURP domain containing protein-coding 0.073770 0.579592 44(AGACGCTT,-,0.00) 561_WT_peak_5352 chr3 186759509 186759902 + 58 NA intron (NM_173217, intron 3 of 6) intron (NM_173217, intron 3 of 6) 20040 NM_003032 6480 Hs.207459 NM_003032 HPRD:00184 ST6GAL1 SIAT1|ST6GalI|ST6N ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 protein-coding 0.015267 0.449239 130(CAAAACTG,+,0.00) 90(GCTTCCTGTCTC,-,0.00) 177(GCATCGCAGC,-,0.00) 561_WT_peak_1666 chr12 46660773 46661007 + 58 NA promoter-TSS (NM_001278389) promoter-TSS (NM_001278389) -612 NM_001278389 81539 Hs.533770 NM_030674 HPRD:12245 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38, member 1 protein-coding 0.029915 0.438298 42(CAAAACCC,+,0.00) 561_WT_peak_470 chr1 147995097 147995481 + 58 NA TTS (NR_104086) TTS (NR_104086) 1143 NR_104086 101954277 NR_104086 RNVU1-19 RNU1-126|RNU1-147|RNVU1-13|vU1.13|vU1.19 RNA, variant U1 small nuclear 19 snRNA 0.031250 0.514286 -61(GGCATCGA,-,0.00),-57(TCGAGGCC,+,0.00) -42(CAGAACCG,+,0.00),71(CGGTTTTT,-,0.00) -19(CTTGGCGG,+,0.00) 561_WT_peak_5867 chr5 107717083 107717416 + 58 NA exon (NM_001163315, exon 1 of 9) exon (NM_001163315, exon 1 of 9) 550 NM_001163315 64839 Hs.657225 NM_022824 HPRD:10950 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine-rich repeat protein 17 protein-coding 0.120120 0.748503 157(CGAGGAGGGGGA,-,0.00) -5(GGCTCCGGGGCG,-,0.00) 92(AGGCCTCT,+,0.00) -108(GGCGGCGA,-,0.00) -71(GGGCGGGCGCGC,-,0.00) 106(TCGGGCGG,-,0.00) -116(CCCGCGGC,-,0.00),-76(GGCGGGGG,+,0.00) 72(CGGCACCA,-,0.00) -21(CGGAAGAAGCAG,+,0.00) -151(GTGCTGAGAGGA,-,0.00),11(CGGCTGAGGGGG,-,0.00) 36(GTCCGGCG,-,0.00) -161(GCCGCGCC,+,0.00) -113(GCGGCGGCGGCG,+,0.00),-31(GCAGGGCCCGCG,+,0.00) -8(CCCGGCTCCGGG,-,0.00) 87(CAGCGAGGCCTC,-,0.00) 561_WT_peak_3653 chr19 14359623 14359861 + 58 NA Intergenic CpG -42745 NM_014921 22859 Hs.94229 NM_014921 LPHN1 CIRL1|CL1|LEC2 latrophilin 1 protein-coding 0.063025 0.619247 -160(CCCTGGGGCCGC,-,0.00) 561_WT_peak_7519 chrX 30907481 30907844 + 58 NA promoter-TSS (NM_152787) promoter-TSS (NM_152787) -151 NM_152787 257397 Hs.188256 NM_152787 HPRD:06738 TAB3 MAP3K7IP3|NAP1 TGF-beta activated kinase 1/MAP3K7 binding protein 3 protein-coding 0.071625 0.601648 -5(AAACGCTT,-,0.00) 53(CGTGCGCG,-,0.00) -142(TCCGTCGG,-,0.00) -49(GGCGGGGG,+,0.00) -130(CGTCGCTC,+,0.00) -140(CGTCGGGC,+,0.00) 59(CGGGTAAT,+,0.00),114(TTTACCTG,-,0.00) 55(TGCGCGGG,-,0.00) 561_WT_peak_5391 chr4 1722137 1722227 + 58 NA intron (NM_138385, intron 1 of 2) CpG 902 NM_001127266 92305 Hs.518562 NM_138385 HPRD:14290 TMEM129 D4S2561E transmembrane protein 129, E3 ubiquitin protein ligase protein-coding 0.100000 0.670330 -105(CGCGCTCAGCCC,+,0.00) 561_WT_peak_4653 chr20 45985319 45985493 + 58 NA exon (NM_001281778, exon 1 of 22) exon (NM_001281778, exon 1 of 22) 227 NM_001281781 23613 Hs.446240 NM_012408 HPRD:10166 ZMYND8 PRKCBP1|PRO2893|RACK7 zinc finger, MYND-type containing 8 protein-coding 0.017241 0.440000 561_WT_peak_736 chr1 221951160 221951350 + 58 NA Intergenic Intergenic -35737 NM_007207 11221 Hs.497822 NM_007207 HPRD:12320 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding 0.005263 0.455497 1(TCCCTCCCCT,+,0.00) -140(CAAAACCA,+,0.00),-30(TGGTTTTG,-,0.00) -76(TTTACCTG,-,0.00) -69(GCTTCCTGTTTC,-,0.00) 561_WT_peak_3630 chr19 12721756 12721950 + 58 NA promoter-TSS (NM_020714) promoter-TSS (NM_020714) 121 NM_153358 163049 Hs.720677 NM_153358 HPRD:08295 ZNF791 - zinc finger protein 791 protein-coding 0.092784 0.651282 -55(CAACACCG,+,0.00) -79(CGCTGGCTCCGT,-,0.00) 561_WT_peak_3676 chr19 17445365 17445800 + 58 NA promoter-TSS (NM_001195422) promoter-TSS (NM_001195422) 56 NM_020959 57719 Hs.590990 NM_020959 HPRD:17223 ANO8 KIAA1623|TMEM16H anoctamin 8 protein-coding 0.128736 0.722477 -126(TCGCCCTCCGGC,+,0.00) -144(GACGCCGGGGCT,-,0.00) 238(CTCGCCCGCC,-,0.00) 134(TCTCCTTCCCGG,+,0.00) 57(CCGCGCCCGCCC,+,0.00) 113(CCGCCCGA,+,0.00) 140(TCCCGGCCCG,+,0.00) -117(GGCGGGGG,+,0.00),-78(CCCCCGGC,-,0.00),0(GCCGCGGG,+,0.00) 143(CGGCCCGA,-,0.00) -4(GGGAGCCGCGGG,+,0.00) 56(GCCGCGCC,+,0.00) 28(GCGGAGCGCGCG,+,0.00) -6(CGGGGAGCCGCG,+,0.00),203(CGCGTCTCCGCC,-,0.00) 185(CCGCCTAG,-,0.00) -57(TCGGCCATGGCG,+,0.00),-55(GGCCATGGCGAG,-,0.00) 25(GCCGCGGAGC,+,0.00) 561_WT_peak_981 chr10 44144191 44144418 + 58 NA promoter-TSS (NM_006973) promoter-TSS (NM_006973) 22 NM_006973 7580 Hs.522885 NM_006973 HPRD:01924 ZNF32 KOX30 zinc finger protein 32 protein-coding 0.132159 0.741228 20(CTCGGCGGCC,-,0.00) -120(AGCGGCCT,-,0.00) 0(CCGCCCGCCGGG,+,0.00) -75(GGCGCCGA,-,0.00) -59(CAGCGCCAGCGC,+,0.00) -60(GCAGCGCCAGCG,+,0.00),-50(CGCCGGCGCCGG,-,0.00),-48(CCGGCGCCGGCG,+,0.00),22(CGGCGGCCCCGG,-,0.00) -150(CCCGCCTTGCCC,+,0.00) 561_WT_peak_7074 chr8 96146141 96146324 + 58 NA 5' UTR (NM_024613, exon 1 of 2) 5' UTR (NM_024613, exon 1 of 2) 283 NM_024613 79666 Hs.29724 NM_024613 HPRD:15147 PLEKHF2 EAPF|PHAFIN2|ZFYVE18 pleckstrin homology domain containing, family F (with FYVE domain) member 2 protein-coding 0.147541 0.750000 -76(TCGCCGCC,+,0.00) -114(CGTCCGCG,-,0.00) -8(CGGGCCGGGA,-,0.00) -61(CCCGCGGC,-,0.00) -7(GGGCCGGGAGGG,-,0.00) -24(GTCCGCCG,-,0.00) -81(CGCTGTCGCCGC,-,0.00),-75(CGCCGCCGCCGC,-,0.00),-72(CGCCGCCGCCGC,-,0.00) 561_WT_peak_1646 chr12 31899729 31899899 + 58 NA Intergenic Intergenic -17706 NM_001278412 196394 Hs.585084 NM_001113402 HPRD:14115 AMN1 - antagonist of mitotic exit network 1 homolog (S. cerevisiae) protein-coding 0.011765 0.397661 -20(CAAGACCG,+,0.00) 561_WT_peak_3685 chr19 18700138 18700509 + 58 NA exon (NM_001100419, exon 3 of 5) exon (NM_001100419, exon 3 of 5) 828 NM_001100418 55049 Hs.655317 NM_017967 HPRD:07948 C19orf60 - chromosome 19 open reading frame 60 protein-coding 0.086253 0.717742 70(TCGCCGCC,+,0.00) -153(GAGTCAGGAAGC,+,0.00) -44(GGCGCGGC,-,0.00),4(TGCGCAGC,-,0.00),151(TGCGCAGC,-,0.00) 76(CCGCCTCG,-,0.00) 67(CCTTCGCCGC,-,0.00),119(GCCTCGCAGG,-,0.00) 561_WT_peak_1342 chr11 64889375 64889573 + 58 NA promoter-TSS (NM_004927) promoter-TSS (NM_004927) -181 NR_037567 740 Hs.744882 NM_004927 HPRD:06037 MRPL49 C11orf4|L49mt|MRP-L49|NOF|NOF1 mitochondrial ribosomal protein L49 protein-coding 0.090909 0.663317 -85(GGAGCAGGGCCA,-,0.00) -157(TCGCGACG,-,0.00) -58(TCTTCGGTTCCC,-,0.00),-8(CCTTCGGATCCA,-,0.00) 561_WT_peak_3533 chr18 74774602 74774772 + 58 NA intron (NM_001025101, intron 3 of 8) intron (NM_001025101, intron 3 of 8) -45632 NM_001025092 4155 Hs.551713 NM_002385 HPRD:01158 MBP - myelin basic protein protein-coding 0.023529 0.497076 -96(TGGTTTTG,-,0.00) 561_WT_peak_3816 chr19 47249299 47249470 + 58 NA promoter-TSS (NM_001039885) promoter-TSS (NM_001039885) 81 NM_024301 79147 Hs.515493 NM_024301 HPRD:05962 FKRP LGMD2I|MDC1C|MDDGA5|MDDGB5|MDDGC5 fukutin related protein protein-coding 0.146199 0.767442 -42(CTCGGCCTCC,-,0.00) -18(GGCTTCGA,-,0.00) -108(CGGGCCGGGC,-,0.00),-103(CGGGCCGGGC,-,0.00) -134(GCGGCGGCGGCG,+,0.00),-128(GCGGCGGCAGCG,+,0.00) -97(GGGCCGGGTT,+,0.00),-53(AACTCGGCGC,-,0.00) -38(GCCTCCCAGC,-,0.00) 561_WT_peak_2730 chr16 22201397 22201764 + 58 NA Intergenic CpG -16012 NM_013302 29904 Hs.498892 NM_013302 EEF2K HSU93850|eEF-2K eukaryotic elongation factor-2 kinase protein-coding 0.122616 0.720109 14(CGACCCGGCGGC,+,0.00) -16(CCGACGCC,+,0.00) 26(CCCGCGGC,-,0.00) 156(GTCCGCCG,-,0.00),163(GTCCGCCG,-,0.00) -100(TGCGCAGC,-,0.00) -115(GCCTGTCCCCGC,-,0.00),19(CGGCGGCCCCGC,-,0.00),95(CCCTGGCCCTGC,-,0.00) -47(CTCGGCTACGCG,-,0.00),20(GGCGGCCCCGCG,-,0.00),28(CGCGGCTCCACG,-,0.00) 91(CTCGCCCTGGCC,+,0.00),133(GCCGCCGTGGAG,+,0.00) 24(GCCCCGCGGC,-,0.00),184(GCCCCGCTGC,-,0.00) 561_WT_peak_7528 chrX 45711108 45711326 + 58 NA promoter-TSS (NR_125365) promoter-TSS (NR_125365) -297 NR_125365 401585 Hs.633348 NR_125365 LOC401585 - uncharacterized LOC401585 ncRNA 0.087156 0.721461 -55(CCCGCGGC,-,0.00),-42(CCCGCGGC,-,0.00) -13(CTCTGCCCCCGC,-,0.00) 561_WT_peak_4070 chr2 54801644 54801842 + 58 NA intron (NM_178313, intron 1 of 30) intron (NM_178313, intron 1 of 30) 16212 NM_178313 6711 Hs.503178 NM_003128 HPRD:01683 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin, beta, non-erythrocytic 1 protein-coding 0.010101 0.517588 561_WT_peak_6080 chr6 2989378 2989585 + 58 NA non-coding (NR_026855, exon 2 of 2) non-coding (NR_026855, exon 2 of 2) 1280 NR_026856 401232 Hs.720158 NM_207495 HPRD:16819 LINC01011 DKFZP686I15217 long intergenic non-protein coding RNA 1011 ncRNA 0.091787 0.721154 -156(TCGGCGCC,+,0.00) -35(AGGCTGGGGCCC,-,0.00) -160(ACGGTCGG,-,0.00) 561_WT_peak_2618 chr15 93425367 93425565 + 58 NA promoter-TSS (NR_037601) promoter-TSS (NR_037601) -607 NR_037600 100507217 Hs.622504 NR_037600 ENSG00000272888 LOC100507217 - uncharacterized LOC100507217 ncRNA 0.020202 0.472362 561_WT_peak_6871 chr7 140372981 140373301 + 58 NA exon (NM_052853, exon 1 of 8) exon (NM_052853, exon 1 of 8) 188 NM_052853 90956 Hs.744886 NM_052853 HPRD:10631 ADCK2 AARF aarF domain containing kinase 2 protein-coding 0.093750 0.719626 -116(CGTCCGCG,-,0.00) -103(AGGGCCGGGC,-,0.00) -32(GCCGCGGG,+,0.00) -111(GCGGGGTCAGGG,+,0.00) -102(GGGCCGGGCT,+,0.00) -41(GCCGCCTGGGCC,+,0.00),-9(GGCGCCCTGGCG,+,0.00),-7(CGCCCTGGCGCG,-,0.00) -45(GCGGGCCGCCTG,+,0.00) 561_WT_peak_4239 chr2 102699736 102699841 + 58 NA intron (NM_001288706, intron 1 of 11) intron (NM_001288706, intron 1 of 11) 12952 NM_001288706 3554 Hs.701982 NM_000877 HPRD:00994 IL1R1 CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80 interleukin 1 receptor, type I protein-coding 0.009524 0.424528 561_WT_peak_4814 chr21 44203928 44204325 + 58 NA Intergenic Intergenic 95259 NM_001260477 10785 Hs.248815 NM_018669 HPRD:09330 WDR4 TRM82|TRMT82 WD repeat domain 4 protein-coding 0.037783 0.635678 23(TCTTCCGGGTCT,-,0.00) 73(CCGACGGA,+,0.00) -24(CCCCCGCC,-,0.00) -69(GGGCTGAGAGAG,-,0.00) -82(CTTCGGAC,+,0.00) 222(GCCCATGGCCTC,-,0.00) 561_WT_peak_980 chr10 43915995 43916254 + 58 NA Intergenic AluSz6|SINE|Alu -11428 NM_001098204 3185 Hs.808 NM_004966 HPRD:03023 HNRNPF HNRPF|OK/SW-cl.23|mcs94-1 heterogeneous nuclear ribonucleoprotein F protein-coding 0.096525 0.696154 -125(GCCGGGCG,+,0.00) -110(TGCGCGGG,-,0.00) -139(GCGGCGGGGC,+,0.00) 561_WT_peak_934 chr10 30818679 30818928 + 58 NA Intergenic Intergenic 95853 NM_005204 1326 Hs.432453 NM_005204 HPRD:01863 MAP3K8 COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding 0.028112 0.432000 -106(TTTACCCT,-,0.00) 561_WT_peak_270 chr1 65886442 65886660 + 57 NA intron (NM_001003680, intron 1 of 19) CpG 152 NM_001198681 54741 Hs.23581 NM_017526 HPRD:13987 LEPROT LEPR|OB-RGRP|OBRGRP|VPS55 leptin receptor overlapping transcript protein-coding 0.096330 0.689498 -65(CTCTCCGGTTCG,-,0.00) 25(AGGCCGCT,+,0.00) -113(CTGCGCCTTCCG,-,0.00) 561_WT_peak_6612 chr7 23053949 23054120 + 57 NA promoter-TSS (NM_032581) promoter-TSS (NM_032581) -264 NM_032581 84668 Hs.85603 NM_032581 HPRD:16837 FAM126A DRCTNNB1A|HCC|HLD5|HYCC1 family with sequence similarity 126, member A protein-coding 0.035088 0.424419 561_WT_peak_1170 chr10 134261031 134261499 + 57 NA exon (NM_173541, exon 3 of 3) exon (NM_173541, exon 3 of 3) 2551 NM_173541 170393 Hs.375059 NM_173541 C10orf91 bA432J24.4 chromosome 10 open reading frame 91 protein-coding 0.036325 0.618337 282(AGGCGGCT,+,0.00) 214(CCCGCGGC,-,0.00) 87(GCTTCCTGTTCA,-,0.00) 561_WT_peak_5645 chr4 185395748 185395949 + 57 NA promoter-TSS (NM_002199) promoter-TSS (NM_002199) -122 NM_002199 3660 Hs.654566 NM_002199 HPRD:00962 IRF2 IRF-2 interferon regulatory factor 2 protein-coding 0.099502 0.688119 -127(CCGCCCTCCTCC,+,0.00),-120(CCTCCCTCCGCC,+,0.00),-62(GGCGGAGGGAGG,-,0.00) -34(CGGGAGGTGCGG,+,0.00) -133(CCCTCTCCGCCC,+,0.00) -143(CCCTCGCCTCCC,-,0.00) -160(CTCCGGCCGCGC,-,0.00) 8(GCGCCGCTTT,+,0.00) -44(GCGGCCCGGCCG,+,0.00) 561_WT_peak_4554 chr20 4794899 4795175 + 57 NA intron (NM_014737, intron 2 of 11) intron (NM_014737, intron 2 of 11) 732 NM_170774 9770 Hs.631504 NM_014737 HPRD:15218 RASSF2 CENP-34|RASFADIN Ras association (RalGDS/AF-6) domain family member 2 protein-coding 0.014493 0.519856 -120(GCCTCCGGGTCC,-,0.00) -119(CCTCCGGGTCCC,-,0.00) -71(ACTTCCTGTTTA,-,0.00) 561_WT_peak_2146 chr14 24664796 24665253 + 57 NA promoter-TSS (NM_006405) promoter-TSS (NM_006405) -82 NM_001014842 10548 Hs.91586 NM_006405 HPRD:09987 TM9SF1 HMP70|MP70 transmembrane 9 superfamily member 1 protein-coding 0.096280 0.707424 115(AGGCCGCT,+,0.00) 50(CCGGGGAGGGGG,-,0.00) -42(GGCGGCGA,-,0.00) 220(AGGGCCGGGG,-,0.00) -111(GGCGGGGG,+,0.00) 37(TCGCGACG,-,0.00),215(TAGCGAGG,-,0.00) -136(GGCTTGCCCCGC,-,0.00),193(AGCTGTCCCCGC,-,0.00) -86(AGCGCGGCCC,-,0.00) -114(CGAGGCGG,+,0.00) 67(GCCTGGCAGC,-,0.00) 64(GAGGCCTGGCAG,+,0.00),110(CTGCTAGGCCGC,-,0.00) 561_WT_peak_5083 chr3 44903403 44903594 + 57 NA promoter-TSS (NM_144638) promoter-TSS (NM_144638) 90 NM_144638 131616 Hs.646856 NM_144638 HPRD:15540 TMEM42 - transmembrane protein 42 protein-coding 0.141361 0.734375 -106(CGCGTACC,+,0.00),-10(CGCGTTCG,+,0.00) -45(CGCTTTTG,-,0.00) -127(GGGCGGCGCC,+,0.00),-49(GCGCCGCTTT,+,0.00) 16(CCGCCAAG,-,0.00) -3(GGGGCCCTGGCC,+,0.00),-1(GGCCCTGGCCGC,-,0.00) 561_WT_peak_4986 chr3 4847670 4847708 + 57 NA intron (NM_001168272, intron 53 of 60) intron (NM_001168272, intron 53 of 60) -54415 NR_004428 100126791 Hs.663059 NR_004428 ENSG00000235947 EGOT EGO|NCRNA00190 eosinophil granule ontogeny transcript (non-protein coding) ncRNA 0.052632 0.435897 -161(AAGCGTTT,+,0.00) 561_WT_peak_685 chr1 203296724 203297136 + 57 NA Intergenic Intergenic 22266 NM_006763 7832 Hs.519162 NM_006763 HPRD:03357 BTG2 PC3|TIS21 BTG family, member 2 protein-coding 0.067961 0.639225 -147(CCCCCGGC,-,0.00),33(CGCCCGGC,-,0.00) 165(TCGTGCCT,+,0.00) -91(CGAGGCGG,+,0.00) 561_WT_peak_702 chr1 206730381 206730551 + 57 NA promoter-TSS (NM_182665) promoter-TSS (NM_182665) -26 NM_182665 83593 Hs.497579 NM_031437 HPRD:06117 RASSF5 Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3 Ras association (RalGDS/AF-6) domain family member 5 protein-coding 0.082353 0.701754 -120(GGAGGCGGGGGA,-,0.00),-19(GGAGGCGGGGGA,-,0.00) -63(AAGTGGCT,+,0.00) -124(GCGGGGAGGCGG,-,0.00),-23(CGCGGGAGGCGG,-,0.00) -117(GGCGGGGG,+,0.00),-16(GGCGGGGG,+,0.00) -87(CGGCTTTG,-,0.00) -45(TTTACGCG,-,0.00) -134(CACCCAGGCGGC,-,0.00),-96(CAGCCGAGCCGG,-,0.00) 561_WT_peak_5785 chr5 67730077 67730379 + 57 NA Intergenic Intergenic 141832 NM_001242466 5295 Hs.132225 NM_181504 HPRD:01381 PIK3R1 AGM7|GRB1|p85|p85-ALPHA phosphoinositide-3-kinase, regulatory subunit 1 (alpha) protein-coding 0.039735 0.580858 70(GAAACAGGAAGC,+,0.00) 561_WT_peak_6567 chr7 915681 915974 + 57 NA promoter-TSS (NM_015949) promoter-TSS (NM_015949) -364 NM_015949 51608 Hs.107387 NM_015949 HPRD:12909 GET4 C7orf20|CEE|TRC35 golgi to ER traffic protein 4 homolog (S. cerevisiae) protein-coding 0.102389 0.656463 56(GCTCCCGGGCCC,-,0.00) 34(TCCCGGCCCC,+,0.00) 3(TCGTGCCA,+,0.00),49(ACGTGCCG,+,0.00) -25(TTTACGCG,-,0.00) 65(CCCGCCCTGGGC,+,0.00) 561_WT_peak_715 chr1 208056735 208056869 + 57 NA Intergenic Intergenic 27881 NM_001025109 947 Hs.374990 NM_001773 HPRD:00790 CD34 - CD34 molecule protein-coding 0.007463 0.340741 561_WT_peak_3245 chr17 48785231 48785480 + 57 NA promoter-TSS (NM_052855) promoter-TSS (NM_052855) -85 NM_052855 91369 Hs.463426 NM_052855 HPRD:17502 ANKRD40 - ankyrin repeat domain 40 protein-coding 0.056225 0.544000 -157(CCGCGCCTCCCG,-,0.00) -158(GCCGCGCC,+,0.00) -163(CCCGGGCCGCGC,-,0.00) -160(GGGCCGCGCC,+,0.00) -70(GCGCCCGGGCTG,+,0.00),-66(CCGGGCTGGCTG,+,0.00) 561_WT_peak_5577 chr4 109893988 109894146 + 57 NA intron (NM_001256074, intron 6 of 31) intron (NM_001256074, intron 6 of 31) -209832 NM_001146590 64850 Hs.106576 NM_031279 HPRD:10639 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding 0.006329 0.364780 561_WT_peak_2342 chr14 93581881 93582051 + 57 NA intron (NM_014216, intron 1 of 10) CpG-7316 297 NM_001142593 3705 Hs.308122 NM_014216 HPRD:03501 ITPK1 ITRPK1 inositol-tetrakisphosphate 1-kinase protein-coding 0.123529 0.777778 -50(CCTCCCTCCTCC,+,0.00),-47(CCCTCCTCCTCC,+,0.00) -157(GAAGCCGGGCCT,-,0.00) -121(CCGCCCTCCCGC,+,0.00),-40(CCTCCCGCCCGG,+,0.00) -133(CCCCCGCC,-,0.00) -131(CCCGCCCTGCCC,+,0.00) -7(CAGCCGGGCCGT,-,0.00) 561_WT_peak_583 chr1 161102313 161102485 + 57 NA promoter-TSS (NM_001039712) promoter-TSS (NM_001039712) 79 NM_032998 9191 Hs.744092 NM_004216 HPRD:06022 DEDD CASP8IP1|DEDD1|DEFT|FLDED1 death effector domain containing protein-coding 0.151163 0.809249 -94(CCGCTCTCCCGG,+,0.00) -123(TCGGCGCC,+,0.00) -88(TCCCGGGCCT,+,0.00) -2(GGCGGGGG,+,0.00) -46(CGCCGCCGCCGC,-,0.00),-43(CGCCGCCGCCGC,-,0.00),-40(CGCCGCCGCCGC,-,0.00),-37(CGCCGCCGCCGC,-,0.00) -118(GCCGCCATGTTG,+,0.00),-33(GCCGCCGCGGCC,+,0.00) 561_WT_peak_1128 chr10 103911907 103912118 + 57 NA promoter-TSS (NM_001284389) promoter-TSS (NM_001284389) 79 NM_001284389 9221 Hs.523238 NM_004741 ENSG00000166197 NOLC1 NOPP130|NOPP140|NS5ATP13|P130 nucleolar and coiled-body phosphoprotein 1 protein-coding 0.085308 0.627358 -95(GGGACCGGAAAG,+,0.00) -98(CGTGGGAC,+,0.00) -128(GGCTCCGCCC,-,0.00) 561_WT_peak_2904 chr16 74472375 74472629 + 57 NA Intergenic Intergenic -17134 NM_001011880 497190 Hs.454670 NM_001011880 HPRD:17419 CLEC18B MRCL2 C-type lectin domain family 18, member B protein-coding 0.000000 0.407843 -159(CCTCTCCTTCCC,-,0.00) -33(GTTTCCTGTTTC,-,0.00) 561_WT_peak_4491 chr2 232378781 232378997 + 57 NA non-coding (NR_024079, exon 1 of 3) non-coding (NR_024079, exon 1 of 3) 161 NR_024079 151477 Hs.375211 NM_173513 HPRD:14629 LINC00471 C2orf52 long intergenic non-protein coding RNA 471 ncRNA 0.064815 0.548387 36(CGGACGCG,-,0.00) 43(GGGCACGA,-,0.00) -49(CCCTCGCTGCCC,+,0.00) 561_WT_peak_3240 chr17 47755136 47755306 + 57 NA intron (NM_001007226, intron 1 of 11) CpG 304 NM_001007229 8405 Hs.463382 NM_003563 HPRD:16004 SPOP BTBD32|TEF2 speckle-type POZ protein protein-coding 0.041176 0.654971 -111(GGCGGGGG,+,0.00) 561_WT_peak_5367 chr3 195906547 195906941 + 57 NA Intergenic Tigger15a|DNA|TcMar-Tigger 31556 NM_001039617 131540 Hs.111591 NM_144637 HPRD:15714 ZDHHC19 DHHC19 zinc finger, DHHC-type containing 19 protein-coding 0.022843 0.549367 69(AAGCGGCT,+,0.00),70(AGCGGCTA,-,0.00) -95(GGGCTGGCCCCG,-,0.00) 72(CGGCTAAA,+,0.00) 40(GTAACAGGATGC,+,0.00) -94(GGCTGGCCCCGT,-,0.00),127(GGCAGGCTCCGC,-,0.00) 131(GGCTCCGCCC,-,0.00) 221(GCTGCAGAGC,+,0.00) 561_WT_peak_3954 chr2 8748699 8749030 + 57 NA Intergenic MIRb|SINE|MIR -24942 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LOC101929567 - uncharacterized LOC101929567 ncRNA 0.012085 0.412651 -78(ATGTGGCT,+,0.00) 561_WT_peak_752 chr1 226084912 226085160 + 57 NA Intergenic Intergenic -8190 NM_020997 10637 Hs.656214 NM_020997 HPRD:09116 LEFTY1 LEFTB|LEFTYB left-right determination factor 1 protein-coding 0.012097 0.497992 -66(AACCACTT,-,0.00) 561_WT_peak_3055 chr17 17082679 17082887 + 57 NA intron (NM_015134, intron 21 of 22) AluSg|SINE|Alu 26863 NM_178836 201164 Hs.729079 NM_178836 HPRD:14126 PLD6 ZUC phospholipase D family, member 6 protein-coding 0.004808 0.435407 561_WT_peak_5007 chr3 12648837 12648977 + 57 NA intron (NM_002880, intron 5 of 16) AluJb|SINE|Alu 50394 NM_014160 23609 Hs.591666 NM_014160 HPRD:09761 MKRN2 RNF62 makorin ring finger protein 2 protein-coding 0.042857 0.546099 -142(TTGTGCCG,+,0.00) -92(GGCCAAGGCGGA,-,0.00) 561_WT_peak_2125 chr14 21979415 21979878 + 57 NA promoter-TSS (NM_019852) promoter-TSS (NM_019852) -189 NM_019852 56339 Hs.168799 NM_019852 HPRD:14389 METTL3 IME4|M6A|MT-A70|Spo8 methyltransferase like 3 protein-coding 0.053996 0.523707 185(CAGTTTTG,-,0.00) 238(TCGCCCTGGCTG,+,0.00) 561_WT_peak_3619 chr19 10676521 10676842 + 57 NA promoter-TSS (NM_023008) promoter-TSS (NM_023008) 21 NM_023008 65095 Hs.709967 NM_023008 HPRD:10969 KRI1 - KRI1 homolog (S. cerevisiae) protein-coding 0.146417 0.714286 -89(TCGCGCTCCCGG,+,0.00),-16(CCGGCATGGCGG,-,0.00) -148(CGGCCGGCGCGC,-,0.00) 11(CGCACGCG,-,0.00) -7(CGGTTCTG,-,0.00) -47(TTCACCCG,-,0.00) 147(ACCGCCCA,+,0.00) 41(GCGGGGCCGCCC,+,0.00) 97(AACCCCGCCC,-,0.00) -15(CGGCATGGCGGT,-,0.00) 561_WT_peak_1584 chr12 9822437 9822491 + 57 NA intron (NM_001197319, intron 1 of 2) intron (NM_001197319, intron 1 of 2) 160 NR_036693 29121 Hs.268326 NM_013269 CLEC2D CLAX|LLT1|OCIL C-type lectin domain family 2, member D protein-coding 0.000000 0.436364 561_WT_peak_338 chr1 100503416 100503538 + 57 NA promoter-TSS (NM_033055) promoter-TSS (NM_033055) -312 NM_033055 64645 Hs.124156 NM_033055 HPRD:11022 HIAT1 - hippocampus abundant transcript 1 protein-coding 0.090164 0.601626 -164(CTGAAGAAGGGG,+,0.00) -150(CAAAAACG,+,0.00),-130(CAGAACCG,+,0.00) -148(AAAACGGCCC,-,0.00) 561_WT_peak_2023 chr13 45151064 45151342 + 57 NA promoter-TSS (NM_001243799) promoter-TSS (NM_001243799) -502 NM_183422 8848 Hs.436383 NM_006022 TSC22D1 Ptg-2|TGFB1I4|TSC22 TSC22 domain family, member 1 protein-coding 0.125899 0.724014 63(CCGACGCC,+,0.00) 92(TTGGTCGG,-,0.00) -145(GGGAGGAAGGGG,+,0.00),-65(CCTCTTCCTCCG,-,0.00),-34(CCGCTGCTCCCG,-,0.00) -59(CCTCCGCAGC,-,0.00) 561_WT_peak_275 chr1 67396058 67396441 + 57 NA intron (NM_001077704, intron 1 of 13) CpG 323 NM_001077704 57708 Hs.605432 NM_020948 HPRD:11362 MIER1 ER1|MI-ER1 mesoderm induction early response 1, transcriptional regulator protein-coding 0.078329 0.695312 130(GGGCGCCCGCCG,+,0.00) -96(CCCCGGCCCT,+,0.00),-49(GCCCGGCCCT,+,0.00) -105(GCCGGGCG,+,0.00),-97(CCCCCGGC,-,0.00) 50(AGGAGGAAGCGG,+,0.00) 204(GCTTCCTCTTGC,-,0.00) -40(TGCTGGCGCCGC,-,0.00) -111(CCCGGAGCCGGG,+,0.00) 561_WT_peak_6897 chr7 150253967 150254046 + 57 NA Intergenic LTR49-int|LTR|ERV1 -10452 NM_018326 55303 Hs.647101 NM_018326 HPRD:16281 GIMAP4 IAN-1|IAN1|IMAP4 GTPase, IMAP family member 4 protein-coding 0.012658 0.412500 -127(AAGCCTCT,+,0.00) -145(GCTTCCTGTTAT,-,0.00) 561_WT_peak_2207 chr14 52313351 52313519 + 57 NA Intergenic Intergenic -13587 NM_053064 54331 Hs.187772 NM_053064 HPRD:16234 GNG2 - guanine nucleotide binding protein (G protein), gamma 2 protein-coding 0.011905 0.562130 561_WT_peak_1537 chr12 77516 77686 + 57 NA Intergenic Intergenic 9994 NR_026823 677784 Hs.722487 NR_026823 ENSG00000206114 FAM138D F379 family with sequence similarity 138, member D ncRNA 0.005882 0.497076 561_WT_peak_1006 chr10 63842461 63842751 + 57 NA intron (NM_001244638, intron 5 of 6) intron (NM_001244638, intron 5 of 6) 33636 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT rich interactive domain 5B (MRF1-like) protein-coding 0.017241 0.381443 561_WT_peak_6660 chr7 44678817 44678938 + 57 NA intron (NM_001003941, intron 2 of 8) intron (NM_001003941, intron 2 of 8) 32756 NM_002541 4967 Hs.488181 NM_002541 HPRD:08938 OGDH AKGDH|E1k|OGDC oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) protein-coding 0.000000 0.532787 561_WT_peak_2866 chr16 66785274 66785470 + 57 NA intron (NM_001286157, intron 1 of 11) CpG-9372 153 NM_006141 1783 Hs.369068 NM_006141 HPRD:09923 DYNC1LI2 DNCLI2|LIC2 dynein, cytoplasmic 1, light intermediate chain 2 protein-coding 0.122449 0.771574 -70(CCGACCGC,+,0.00) -157(CGGGCCGGGC,-,0.00),-77(GCCCGGCCCG,+,0.00) -63(CCCGCGGC,-,0.00) -74(CGGCCCGA,-,0.00) -151(GGGCTGGGATGG,-,0.00) -130(CGTCGGCC,+,0.00),-113(GTCCGACG,-,0.00) -92(GCCGCGCC,+,0.00) -156(GGGCCGGGCT,+,0.00) 561_WT_peak_6774 chr7 99933181 99933466 + 57 NA promoter-TSS (NR_036570) promoter-TSS (NR_036570) -365 NR_036569 101752399 Hs.521075 NR_036569 STAG3L5P-PVRIG2P-PILRB LOC101735302-LOC101752334-PILRB STAG3L5P-PVRIG2P-PILRB readthrough ncRNA 0.091228 0.678322 -111(AGGGCCGAATTC,+,0.00) -15(ATGCCGCT,+,0.00) 58(TGGACGCC,+,0.00) 97(GACCGCGAGCCC,+,0.00) -99(TTTGCCCG,-,0.00) -110(GGGCCGAATT,+,0.00) 5(CGAGGCGG,+,0.00) 561_WT_peak_2124 chr14 21979187 21979327 + 57 NA intron (NM_019852, intron 1 of 10) CpG 200 NM_019852 56339 Hs.168799 NM_019852 HPRD:14389 METTL3 IME4|M6A|MT-A70|Spo8 methyltransferase like 3 protein-coding 0.057143 0.666667 -131(CCGTCCTCCCCG,+,0.00),-130(CGTCCTCCCCGG,+,0.00) -51(CAGCCTCTCCCG,-,0.00) 561_WT_peak_3711 chr19 29703571 29703819 + 57 NA intron (NM_006003, intron 1 of 1) CpG 441 NM_006003 7386 Hs.743307 NM_006003 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding 0.120968 0.751004 39(GACCCCCAGCCC,+,0.00) -113(CGGACGCG,-,0.00) -6(CCCGCGGC,-,0.00) -116(CGGCGGAC,+,0.00) 13(GGGGGCCGGAGG,+,0.00) -44(GCCGCCCA,+,0.00) 60(CCCTCGCCCCGG,-,0.00) -145(AACTCGGCCG,-,0.00) 561_WT_peak_3461 chr18 20811270 20811708 + 57 NA intron (NR_023359, intron 4 of 6) intron (NR_023359, intron 4 of 6) 75700 NM_138375 91768 Hs.11108 NM_138375 HPRD:16461 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding 0.029680 0.469248 186(AGACGCTT,-,0.00) 561_WT_peak_920 chr10 26986196 26986430 + 57 NA promoter-TSS (NM_014317) promoter-TSS (NM_014317) -282 NM_014317 23590 Hs.558468 NM_014317 HPRD:09591 PDSS1 COQ1|COQ10D2|DPS|SPS|TPRT|TPT|TPT 1|hDPS1 prenyl (decaprenyl) diphosphate synthase, subunit 1 protein-coding 0.064103 0.595745 -1(GGCTCGCCCCGG,-,0.00) 561_WT_peak_3640 chr19 12904058 12904291 + 57 NA TTS (NM_002229) TTS (NM_002229) 1864 NM_002229 3726 Hs.25292 NM_002229 HPRD:01303 JUNB AP-1 jun B proto-oncogene protein-coding 0.030043 0.470085 -69(CTGGGAGGGCGG,-,0.00) -62(GGCGGGGG,+,0.00) 561_WT_peak_2260 chr14 65453523 65453729 + 57 NA 5' UTR (NM_002028, exon 1 of 12) 5' UTR (NM_002028, exon 1 of 12) 119 NM_002028 2342 Hs.325531 NM_002028 HPRD:00608 FNTB FPTB farnesyltransferase, CAAX box, beta protein-coding 0.077670 0.536232 561_WT_peak_4258 chr2 112291051 112291453 + 57 NA Intergenic Intergenic -38560 NR_024373 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-1HG AGD2|LINC00978 MIR4435-1 host gene (non-protein coding) ncRNA 0.004975 0.409429 79(CGTGTAAA,+,0.00) 561_WT_peak_598 chr1 162805099 162805331 + 57 NA Intergenic Intergenic 33390 NM_178550 339512 Hs.407631 NM_178550 HPRD:14661 C1orf110 - chromosome 1 open reading frame 110 protein-coding 0.004310 0.381974 -147(AGAGACTT,-,0.00) 561_WT_peak_6407 chr6 97731113 97731287 + 57 NA promoter-TSS (NM_198468) promoter-TSS (NM_198468) -148 NM_198468 253714 Hs.444292 NM_198468 HPRD:12865 MMS22L C6orf167|dJ39B17.2 MMS22-like, DNA repair protein protein-coding 0.091954 0.520000 -163(CCCCCGGC,-,0.00) -84(CGGGACGA,-,0.00) -16(CTGGTAAA,+,0.00) -134(TGCGCGGA,-,0.00) -23(GCGGGGCCTGGT,+,0.00) 561_WT_peak_5801 chr5 70883118 70883429 + 57 NA exon (NM_022132, exon 1 of 17) exon (NM_022132, exon 1 of 17) 158 NM_022132 64087 Hs.604789 NM_022132 HPRD:01952 MCCC2 MCCB methylcrotonoyl-CoA carboxylase 2 (beta) protein-coding 0.086817 0.717949 -48(TCGCTCGG,-,0.00) 21(CGCCGGGCCGCG,+,0.00) -59(GGGCCGCTCT,+,0.00) -35(GCCGCCATGTGG,+,0.00) 20(CCGCCGGGCCGC,-,0.00),52(GTGGCCTCGCTG,+,0.00),117(GTGGCCTGGCCG,+,0.00) 561_WT_peak_2199 chr14 50359561 50360000 + 57 NA promoter-TSS (NM_001663) promoter-TSS (NM_001663) 44 NM_001663 382 Hs.525330 NM_001663 ARF6 - ADP-ribosylation factor 6 protein-coding 0.113895 0.700000 -162(AGACGCTA,-,0.00),-8(AGGTCGCT,+,0.00) 63(TCGGCGCC,+,0.00) 9(ACGGTCGG,-,0.00) -126(GTCCGAGG,-,0.00) -70(AGCCCCGCCC,-,0.00),-26(GGGCCGCTCT,+,0.00),161(GGGCCGAGCT,+,0.00) 561_WT_peak_5040 chr3 27763447 27763850 + 57 NA exon (NM_005442, exon 1 of 6) exon (NM_005442, exon 1 of 6) 558 NM_001278182 8320 Hs.591663 NM_005442 HPRD:07054 EOMES TBR2 eomesodermin protein-coding 0.086849 0.680693 -39(TGGCGGCT,+,0.00) -162(CCTCCTCCCCGC,+,0.00) -80(GGCGTCGG,-,0.00) -58(GCCGCGGG,+,0.00) 112(CGGGTAGA,+,0.00) 54(GGGCCGCGCT,+,0.00) -15(CCGCCTCG,-,0.00),92(CCGCCTCG,-,0.00) -13(GCCTCGCAGG,-,0.00) 561_WT_peak_7345 chr9 94181765 94181799 + 57 NA intron (NM_001290000, intron 1 of 1) intron (NM_001290000, intron 1 of 1) 4362 NM_005384 4783 Hs.79334 NM_005384 HPRD:05619 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding 0.000000 0.371429 561_WT_peak_3439 chr18 12947379 12947600 + 57 NA promoter-TSS (NM_031216) promoter-TSS (NM_031216) -494 NM_031216 81929 Hs.301048 NM_031216 HPRD:15319 SEH1L SEC13L|SEH1A|SEH1B|Seh1 SEH1-like (S. cerevisiae) protein-coding 0.076923 0.576577 -154(AGGCGTCT,+,0.00) -152(GCGTCTCCCCGG,+,0.00) -118(CCGACGGA,+,0.00) -146(CCCCGGCCCT,+,0.00) 561_WT_peak_5212 chr3 113775251 113775538 + 57 NA promoter-TSS (NM_024638) promoter-TSS (NM_024638) 66 NM_020817 57577 Hs.477159 NM_020817 HPRD:13856 KIAA1407 - KIAA1407 protein-coding 0.076655 0.611111 -41(GCCTCCGGGTCA,-,0.00) 53(AGGCCGCT,+,0.00) -56(CCTTCTGCCCGG,+,0.00) 103(TCTTGCCG,+,0.00) 80(TAGCAACG,-,0.00) 21(CGTCGAAC,+,0.00) 40(CGAGGCTCTGCG,-,0.00) 561_WT_peak_1220 chr11 14786775 14787027 + 57 NA intron (NM_000922, intron 1 of 15) intron (NM_000922, intron 1 of 15) 121632 NM_000922 5140 Hs.445711 NM_000922 HPRD:03626 PDE3B HcGIP1|cGIPDE1 phosphodiesterase 3B, cGMP-inhibited protein-coding 0.011905 0.335968 -6(TGGTTTTG,-,0.00),3(TGGTTTTG,-,0.00) 561_WT_peak_687 chr1 203734108 203734535 + 57 NA promoter-TSS (NM_017773) promoter-TSS (NM_017773) 37 NM_001136190 54900 Hs.272794 NM_017773 HPRD:08312 LAX1 LAX lymphocyte transmembrane adaptor 1 protein-coding 0.023419 0.516355 21(AAGTGGTT,+,0.00),169(AGCCACCT,-,0.00) 227(TAGCCACG,-,0.00) 108(CCCTCTGTGCCC,+,0.00) 561_WT_peak_3832 chr19 48922633 48922831 + 57 NA intron (NM_000836, intron 8 of 12) intron (NM_000836, intron 8 of 12) 24600 NM_000836 2906 Hs.445015 NM_000836 HPRD:04095 GRIN2D EB11|GluN2D|NMDAR2D|NR2D glutamate receptor, ionotropic, N-methyl D-aspartate 2D protein-coding 0.030303 0.557789 -160(CCCCCGCC,-,0.00) -157(CCGCCTCG,-,0.00) 561_WT_peak_3205 chr17 43226564 43226734 + 57 NA exon (NM_006460, exon 1 of 1) exon (NM_006460, exon 1 of 1) 1965 NM_006460 10614 Hs.586945 NM_006460 HPRD:09544 HEXIM1 CLP1|EDG1|HIS1|MAQ1 hexamethylene bis-acetamide inducible 1 protein-coding 0.052941 0.614035 -66(CGCGGAGGAGCG,+,0.00) 561_WT_peak_5725 chr5 43065008 43065250 + 57 NA TTS (NR_034127) TTS (NR_034127) 1944 NR_034127 100132356 Hs.726831 NM_175919 LOC100132356 - uncharacterized LOC100132356 ncRNA 0.086777 0.580247 38(TAGCGGCG,-,0.00) -8(CGAAACCG,+,0.00) -157(CGGGGAAA,+,0.00) -136(GACACAGGAAGC,+,0.00) -2(CGCTGGCTCGGC,-,0.00) 15(AGCAGAGCCGCG,+,0.00) 561_WT_peak_1903 chr12 122750776 122751082 + 57 NA exon (NM_022916, exon 1 of 13) exon (NM_022916, exon 1 of 13) 139 NM_022916 65082 Hs.592009 NM_022916 HPRD:15651 VPS33A - vacuolar protein sorting 33 homolog A (S. cerevisiae) protein-coding 0.114379 0.664495 131(CAACCCGGAAAC,+,0.00) 7(AGCCGCCA,-,0.00) 45(CCAACCGA,+,0.00) -99(TCCCGCCCCT,+,0.00) -49(TCGCGACG,-,0.00) -6(CGTAGGAC,+,0.00),53(GTCCGCCG,-,0.00) -124(GGGAGGCGAGGG,+,0.00) -39(CCGCCTCG,-,0.00) 561_WT_peak_7134 chr8 125208221 125208386 + 57 NA intron (NR_125420, intron 2 of 2) intron (NR_125420, intron 2 of 2) -24540 NR_103547 157376 Hs.662360 NM_182525 HPRD:08138 FER1L6-AS2 C8orf78 FER1L6 antisense RNA 2 ncRNA 0.006061 0.451807 -82(ACTTCCTGCTTC,-,0.00) 561_WT_peak_4536 chr20 389179 389273 + 57 NA 5' UTR (NM_006462, exon 1 of 11) 5' UTR (NM_006462, exon 1 of 11) 517 NM_031229 10616 Hs.247280 NM_006462 HPRD:16643 RBCK1 C20orf18|HOIL-1|HOIL1|PBMEI|RBCK2|RNF54|UBCE7IP3|XAP3|XAP4|ZRANB4 RanBP-type and C3HC4-type zinc finger containing 1 protein-coding 0.085106 0.705263 -100(GCCGCGGG,+,0.00) -162(CCCTCTCACCGC,+,0.00) -97(GCGGGGACAGCG,+,0.00) 561_WT_peak_901 chr10 17272094 17272338 + 57 NA promoter-TSS (NR_108061) promoter-TSS (NR_108061) -232 NR_108061 100507347 Hs.740502 NR_108060 VIM-AS1 - VIM antisense RNA 1 ncRNA 0.028689 0.579592 -111(AGCCCCGCCC,-,0.00) 561_WT_peak_2438 chr15 41047666 41047873 + 57 NA promoter-TSS (NM_018145) promoter-TSS (NM_018145) -311 NM_018145 55177 Hs.511067 NM_018145 HPRD:07687 RMDN3 FAM82A2|FAM82C|RMD-3|RMD3|ptpip51 regulator of microtubule dynamics 3 protein-coding 0.053140 0.543269 -141(CAGCCAGGCCTC,-,0.00) 561_WT_peak_2954 chr16 89574811 89575019 + 56 NA exon (NM_199367, exon 1 of 10) exon (NM_199367, exon 1 of 10) 119 NM_199367 6687 Hs.185597 NM_003119 HPRD:04149 SPG7 CAR|CMAR|PGN|SPG5C spastic paraplegia 7 (pure and complicated autosomal recessive) protein-coding 0.081731 0.751196 -94(CTCGGCCGCT,-,0.00),16(GGAGGCCGAG,+,0.00) -41(CCCGGGAGGGGG,-,0.00),-40(CCGGGAGGGGGC,-,0.00) -44(AGGCCCGGGA,-,0.00) 31(CAGGTAAA,+,0.00) -78(CCCAGGCCCGGC,-,0.00) -50(CCCGCCAGGCCC,+,0.00) -49(CCGCCAGGCCCG,-,0.00) 561_WT_peak_1596 chr12 10826703 10826921 + 56 NA promoter-TSS (NM_018423) promoter-TSS (NM_018423) 79 NM_018423 55359 Hs.24979 NM_018423 HPRD:15447 STYK1 NOK|SuRTK106 serine/threonine/tyrosine kinase 1 protein-coding 0.059633 0.557078 -143(TCGGGCGG,-,0.00) -131(CCGCGAAG,-,0.00) 561_WT_peak_7313 chr9 79793099 79793339 + 56 NA promoter-TSS (NR_026668) promoter-TSS (NR_026668) -386 NR_026668 100286938 Hs.662256 NR_026668 ENSG00000232998 VPS13A-AS1 - VPS13A antisense RNA 1 ncRNA 0.070833 0.643154 15(CCTTCCGGCCCT,-,0.00),28(GGACCCGGACGC,+,0.00) 17(TTCCGGCCCT,+,0.00) -12(TTCACCCG,-,0.00) 561_WT_peak_3382 chr17 79213018 79213280 + 56 NA promoter-TSS (NM_144679) promoter-TSS (NM_144679) 38 NM_001086521 284184 Hs.356545 NM_001086521 ENSG00000224877 C17orf89 - chromosome 17 open reading frame 89 protein-coding 0.103053 0.684411 -27(TAGCCGCT,+,0.00),18(AGCCGCCT,-,0.00) 28(GCGCCTTCCCCG,+,0.00) -155(TCGAGGCC,+,0.00) 9(CGCGTGCG,+,0.00) -96(CCGACCTA,+,0.00) 73(GCCGCGGG,+,0.00) 26(CCGCGCCTTCCC,-,0.00) 55(GCGGGGCCGAGG,+,0.00) 67(TGAGGAGCCGCG,+,0.00) 5(GGGCCGCGTG,+,0.00),58(GGGCCGAGGT,+,0.00) 561_WT_peak_2408 chr15 23086703 23086935 + 56 NA promoter-TSS (NM_001142275) promoter-TSS (NM_001142275) 24 NM_001142275 123606 Hs.511797 NM_144599 HPRD:10487 NIPA1 FSP3|SPG6 non imprinted in Prader-Willi/Angelman syndrome 1 protein-coding 0.103448 0.669528 -111(CGGCAGGA,-,0.00) -122(GCAGCGGAGC,+,0.00) 561_WT_peak_5579 chr4 111086262 111086516 + 56 NA intron (NM_001130721, intron 2 of 4) intron (NM_001130721, intron 2 of 4) 33382 NM_001130721 79071 Hs.412939 NM_024090 HPRD:13269 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding 0.003937 0.411765 -112(CAAAACAG,+,0.00) 561_WT_peak_6467 chr6 128841519 128841710 + 56 NA 5' UTR (NM_002844, exon 1 of 30) 5' UTR (NM_002844, exon 1 of 30) 205 NM_001291983 5796 Hs.155919 NM_002844 HPRD:03968 PTPRK R-PTP-kappa protein tyrosine phosphatase, receptor type, K protein-coding 0.141361 0.697917 -63(CCGCCCGCCCGC,+,0.00) -102(CGGGCCGGGC,-,0.00) -138(GCCGGGGG,+,0.00) -6(CGTCGCCA,+,0.00) -7(GCGTCGCCAGCG,+,0.00) -40(CTTCGCGG,+,0.00) 14(GGCCGCGGCGGC,-,0.00) 561_WT_peak_5664 chr5 1633924 1634162 + 56 NA promoter-TSS (NR_003713) promoter-TSS (NR_003713) 77 NR_003713 728613 Hs.720393 NR_003713 LOC728613 - programmed cell death 6 pseudogene pseudo 0.109244 0.732218 -95(GGGCTGGGGCGG,-,0.00) 18(AGGGCCGGGC,-,0.00) 21(GCCGGGCG,+,0.00) 32(CCGCCACTTCCG,-,0.00) -126(GCCGCGCC,+,0.00) -110(GCCCAGGGCCGC,-,0.00) 561_WT_peak_2015 chr13 42928715 42928892 + 56 NA Intergenic Intergenic 82514 NM_016248 11215 Hs.105105 NM_016248 HPRD:05261 AKAP11 AKAP-11|AKAP220|PPP1R44|PRKA11 A kinase (PRKA) anchor protein 11 protein-coding 0.011299 0.505618 -53(AGAGGCTT,-,0.00) -122(GGGCTGAGGCTC,-,0.00) 561_WT_peak_4037 chr2 42068045 42068280 + 56 NA Intergenic CpG -36533 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LOC388942 - uncharacterized LOC388942 ncRNA 0.059574 0.563559 -58(AAGTCTCT,+,0.00) -33(CCGGGGACGCAG,-,0.00) 33(TTTACCTG,-,0.00) -150(CTCCGGGCCCGC,-,0.00) 561_WT_peak_7141 chr8 125577206 125577338 + 56 NA intron (NM_001282974, intron 9 of 13) intron (NM_001282974, intron 9 of 13) 25929 NM_001278645 4715 Hs.15977 NM_005005 HPRD:03264 NDUFB9 B22|CI-B22|LYRM3|UQOR22 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa protein-coding 0.007576 0.398496 -41(CAGTTTTG,-,0.00) -89(CTACTCGG,+,0.00) 561_WT_peak_6595 chr7 12250433 12250799 + 56 NA promoter-TSS (NM_001134232) promoter-TSS (NM_001134232) -232 NM_001134232 54664 Hs.396358 NM_018374 TMEM106B - transmembrane protein 106B protein-coding 0.046448 0.506812 166(TCGACGCC,+,0.00) 90(CGTGGCTA,+,0.00) 120(GGGACGCGAAGG,+,0.00) -156(GCTTGCTGTCTC,-,0.00) 561_WT_peak_4991 chr3 5019445 5019788 + 56 NA Intergenic Intergenic -1481 NM_003670 8553 Hs.744856 NM_003670 HPRD:16050 BHLHE40 BHLHB2|DEC1|HLHB2|SHARP-2|STRA13|Stra14 basic helix-loop-helix family, member e40 protein-coding 0.029155 0.523256 33(GGCCTCGA,-,0.00) 122(CGTGTCGG,+,0.00) 561_WT_peak_1228 chr11 18415745 18416077 + 56 NA promoter-TSS (NM_001165415) promoter-TSS (NM_001165415) -25 NM_001165416 3939 Hs.2795 NM_005566 HPRD:01025 LDHA GSD11|HEL-S-133P|LDH1|LDHM lactate dehydrogenase A protein-coding 0.063253 0.627628 52(GCGCGCCACCCG,+,0.00),96(CACCCCCAGCCC,+,0.00) 32(CCGGTCGG,-,0.00) 131(GTCCGCCG,-,0.00) 134(CGCCGGCCCCCC,-,0.00) 561_WT_peak_4271 chr2 114514269 114514448 + 56 NA promoter-TSS (NR_104470) promoter-TSS (NR_104470) 42 NM_025181 80255 Hs.608286 NM_025181 HPRD:11579 SLC35F5 - solute carrier family 35, member F5 protein-coding 0.145251 0.688889 -156(CAGCCCGGAAGC,+,0.00) -23(GGCGGCGA,-,0.00) -94(CGCGTATG,+,0.00) -39(CCGAGCGA,+,0.00) -112(CGGCGGAC,+,0.00) -78(CTTGGCGG,+,0.00) -87(GCAGCGAGGC,+,0.00),-22(GCGGCGAGGC,+,0.00) 561_WT_peak_4027 chr2 37458424 37458719 + 56 NA promoter-TSS (NM_144736) promoter-TSS (NM_144736) 169 NM_005760 10153 Hs.135406 NM_005760 HPRD:09875 CEBPZ CBF|CBF2|HSP-CBF|NOC1 CCAAT/enhancer binding protein (C/EBP), zeta protein-coding 0.088136 0.638514 -27(GCCTCCGAGCCG,-,0.00) -90(AGCCACCT,-,0.00),78(AGGCCGCT,+,0.00) -138(TGGACGCC,+,0.00),-73(TCCACGCC,+,0.00) -47(CCCGCGGC,-,0.00) -114(CGGAAGCGGCGG,+,0.00) -53(CCGGAGCCCGCG,+,0.00) 71(GGCGCCAAGGCC,+,0.00),73(CGCCAAGGCCGC,-,0.00),115(GCGGCCATGGCG,+,0.00),117(GGCCATGGCGGG,-,0.00) -109(GCGGCGGGGC,+,0.00) 561_WT_peak_5048 chr3 31574198 31574454 + 56 NA 5' UTR (NM_178862, exon 1 of 16) 5' UTR (NM_178862, exon 1 of 16) 333 NM_178862 201595 Hs.475812 NM_178862 STT3B CDG1X|SIMP|STT3-B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) protein-coding 0.117188 0.735409 32(TCCTCCTCCTCC,+,0.00),35(TCCTCCTCCTCC,+,0.00),38(TCCTCCTCCTCC,+,0.00),41(TCCTCCTCCTCC,+,0.00) -162(TCGCCGCC,+,0.00) -100(GGGTTGAGAGAG,-,0.00) -30(GTCCGCCG,-,0.00) 48(CCTCCGGGTCCC,-,0.00) 0(AGCGCGCA,+,0.00) -161(CGCCGCCGCCGC,-,0.00),-158(CGCCGCCGCCGC,-,0.00),-27(CGCCGGCCTCGC,-,0.00) -22(GCCTCGCGGC,-,0.00) 561_WT_peak_1282 chr11 48030525 48030746 + 56 NA intron (NM_002843, intron 1 of 24) intron (NM_002843, intron 1 of 24) 28525 NM_002843 5795 Hs.318547 NM_002843 HPRD:02955 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase, receptor type, J protein-coding 0.013575 0.414414 -12(AAAACAAGAAGC,+,0.00) 561_WT_peak_1668 chr12 46766381 46766568 + 56 NA 5' UTR (NM_018976, exon 1 of 16) 5' UTR (NM_018976, exon 1 of 16) 171 NM_018976 54407 Hs.221847 NM_018976 HPRD:05535 SLC38A2 ATA2|PRO1068|SAT2|SNAT2 solute carrier family 38, member 2 protein-coding 0.101604 0.569149 -4(GGCGTCGC,-,0.00) -92(GTCCGCCG,-,0.00) 7(GCTGTGGAGC,+,0.00) 561_WT_peak_4783 chr21 35987516 35987951 + 56 NA promoter-TSS (NM_004414) promoter-TSS (NM_004414) -292 NM_004414 1827 Hs.282326 NM_004414 HPRD:04226 RCAN1 ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding 0.064368 0.621560 255(AAGTGGTT,+,0.00) -142(CCGCCCCCCCAG,+,0.00) 4(CCGCCCGA,+,0.00) -139(CCCCCCCAGCCC,+,0.00) 155(CGTTTTTG,-,0.00) -152(GGCGCGGC,-,0.00) 561_WT_peak_5038 chr3 23987673 23987853 + 56 NA intron (NM_001145425, intron 1 of 7) CpG 151 NM_001145425 9975 Hs.37288 NM_005126 HPRD:03809 NR1D2 BD73|EAR-1R|RVR nuclear receptor subfamily 1, group D, member 2 protein-coding 0.133333 0.701657 -164(CCCGCGGC,-,0.00) -73(CCCGCGCA,+,0.00) -137(CGCTGACACCGC,-,0.00),-80(CGCGGACCCCGC,-,0.00),-79(GCGGACCCCGCG,+,0.00) -161(GCGGCGGGGC,+,0.00) 561_WT_peak_5630 chr4 159968608 159968786 + 56 NA Intergenic Intergenic -12364 NM_152543 152940 Hs.415576 NM_152543 C4orf45 - chromosome 4 open reading frame 45 protein-coding 0.000000 0.346369 561_WT_peak_4356 chr2 170430381 170430555 + 56 NA promoter-TSS (NM_024622) promoter-TSS (NM_024622) -37 NM_024622 79675 Hs.529276 NM_024622 HPRD:07969 FASTKD1 - FAST kinase domains 1 protein-coding 0.068966 0.571429 -81(CGTCGCTC,+,0.00) 561_WT_peak_6645 chr7 38272832 38273030 + 56 NA Intergenic Intergenic 40317 NM_001003806 445347 Hs.534032 NM_001003799 TARP CD3G|TCRG|TCRGC1|TCRGC2 TCR gamma alternate reading frame protein protein-coding 0.020202 0.497487 561_WT_peak_5676 chr5 21459463 21459803 + 56 NA promoter-TSS (NR_027027) promoter-TSS (NR_027027) 44 NR_027027 728411 Hs.88181 NM_207331 ENSG00000183666 GUSBP1 - glucuronidase, beta pseudogene 1 pseudo 0.094118 0.662757 132(CTAGGCCGCC,-,0.00) -159(TGCGCGGC,-,0.00),-125(GCCGCGCA,+,0.00) -76(CGGCGGCGCCGC,-,0.00) 102(CGTGTCGG,+,0.00) 561_WT_peak_463 chr1 147753402 147753576 + 56 NA intron (NR_102404, intron 17 of 18).2 tRNA-His-CAY_|tRNA|tRNA -34147 NR_120331 101927468 Hs.515867 NR_120331 LOC101927468 - uncharacterized LOC101927468 ncRNA 0.086207 0.531429 -40(GAATCCGAGTCA,-,0.00) -122(CCGCCATCGCGG,+,0.00) -121(CGCCATCGCGGC,-,0.00) 561_WT_peak_3766 chr19 40476550 40476858 + 56 NA promoter-TSS (NM_153001) promoter-TSS (NM_153001) -208 NM_153001 5704 Hs.211594 NM_006503 HPRD:04085 PSMC4 MIP224|RPT3|S6|TBP-7|TBP7 proteasome (prosome, macropain) 26S subunit, ATPase, 4 protein-coding 0.074675 0.621359 -42(CCCGTACG,+,0.00) -147(GGGGTAAA,+,0.00),-50(CTTACCCG,-,0.00) 561_WT_peak_1181 chr11 695901 696245 + 56 NA promoter-TSS (NM_021008) promoter-TSS (NM_021008) -319 NM_001293634 10522 Hs.243994 NM_021008 HPRD:04027 DEAF1 MRD24|NUDR|SPN|ZMYND5 DEAF1 transcription factor protein-coding 0.110465 0.698551 -140(GCTTTCGGTGCG,-,0.00) -110(CGTCTCTA,+,0.00) -3(GCCTGGCCCCGG,-,0.00),142(CGCGGGCGCCGG,-,0.00) -21(GCTCCCCCGC,-,0.00),17(GGTGCGGAGC,+,0.00) -66(GCGGCCTGGCCT,+,0.00),162(CCGTCCTGCCTG,+,0.00) 561_WT_peak_1084 chr10 89577551 89577856 + 56 NA promoter-TSS (NR_028492) promoter-TSS (NR_028492) 214 NM_032810 84896 Hs.435948 NM_032810 HPRD:12499 ATAD1 AFDC1|THORASE ATPase family, AAA domain containing 1 protein-coding 0.072131 0.637255 -151(AGCCGCCT,-,0.00) 11(AGGCCCGGGA,-,0.00) -112(CGGGACGA,-,0.00),-55(TGGCACGA,-,0.00) 134(CCGAGACG,-,0.00) -1(GACGCCAAGGCG,+,0.00) 54(GCTGCGGGGC,+,0.00) 561_WT_peak_3043 chr17 8844841 8845155 + 56 NA intron (NM_001251851, intron 1 of 18) intron (NM_001251851, intron 1 of 18) 24031 NM_001251853 23533 Hs.278901 NM_014308 HPRD:11433 PIK3R5 F730038I15Rik|FOAP-2|P101-PI3K|p101 phosphoinositide-3-kinase, regulatory subunit 5 protein-coding 0.041401 0.590476 -11(CGGGGCAGGCGG,-,0.00) -154(GTTTCCTGTTTT,-,0.00) -12(GCGGGGCAGGCG,+,0.00) -36(CGCGGCACCGTG,-,0.00) -47(AGAGCGGCCC,-,0.00) 561_WT_peak_7404 chr9 117459511 117459726 + 56 NA Intergenic Intergenic -15249 NM_001199233 100505478 Hs.200101 NM_001199233 LOC100505478 - uncharacterized LOC100505478 protein-coding 0.013953 0.462963 28(CCCCCGGC,-,0.00) -95(GGGCTGAAAGAG,-,0.00) 561_WT_peak_4374 chr2 175617262 175617518 + 56 NA intron (NM_001039523, intron 7 of 9) L2a|LINE|L2 11810 NM_001039523 1134 Hs.434479 NM_000079 HPRD:00007 CHRNA1 ACHRA|ACHRD|CHRNA|CMS2A|FCCMS|SCCMS cholinergic receptor, nicotinic, alpha 1 (muscle) protein-coding 0.007812 0.365759 561_WT_peak_4159 chr2 75904498 75904707 + 56 NA intron (NM_001201334, intron 12 of 16) MER20|DNA|hAT-Charlie 30693 NM_014763 9801 Hs.44024 NM_014763 MRPL19 L19mt|MRP-L15|MRP-L19|MRPL15|RLX1|RPML15 mitochondrial ribosomal protein L19 protein-coding 0.004785 0.452381 -12(GCTGCTAAGC,+,0.00) 561_WT_peak_5669 chr5 6712823 6713030 + 56 NA Intergenic CpG -1792 NM_006999 11044 Hs.481542 NM_006999 HPRD:09239 PAPD7 LAK-1|LAK1|POLK|POLS|TRF4|TRF4-1|TRF41|TUTASE5 PAP associated domain containing 7 protein-coding 0.125604 0.740385 -146(TGTCCTTCCCGG,+,0.00) -109(CGGCACGG,-,0.00),-104(CGGCACGC,-,0.00) -61(GGCCGACG,-,0.00) -124(GCGGAGCCAGCC,+,0.00),-92(CGCTCACCCCGC,-,0.00),20(CCGGGGCCCGCC,+,0.00) -135(GCTCCGGAGC,+,0.00),-135(GCTCCGGAGC,-,0.00),-127(GCGGCGGAGC,+,0.00) 561_WT_peak_6946 chr8 22876705 22876820 + 56 NA TTS (NM_147187) TTS (NM_147187) 19670 NM_015178 23221 Hs.372688 NM_015178 HPRD:06300 RHOBTB2 DBC2 Rho-related BTB domain containing 2 protein-coding 0.017391 0.551724 -83(AGGCGGCT,+,0.00),-68(AAGCGGCT,+,0.00) 561_WT_peak_569 chr1 158979386 158979890 + 56 NA promoter-TSS (NM_005531) promoter-TSS (NM_005531) -44 NM_005531 3428 Hs.380250 NM_005531 HPRD:00969 IFI16 IFNGIP1|PYHIN2 interferon, gamma-inducible protein 16 protein-coding 0.013889 0.396040 561_WT_peak_1215 chr11 14436827 14436999 + 56 NA Intergenic Intergenic -50861 NM_001177314 22800 Hs.502004 NM_012250 HPRD:02518 RRAS2 TC21 related RAS viral (r-ras) oncogene homolog 2 protein-coding 0.017442 0.543353 -4(GGGAGGCGAAGG,+,0.00) 561_WT_peak_3261 chr17 56296652 56296953 + 56 NA promoter-TSS (NM_017777) promoter-TSS (NM_017777) -136 NM_017777 54903 Hs.408843 NM_017777 HPRD:07900 MKS1 BBS13|MES|MKS|POC12 Meckel syndrome, type 1 protein-coding 0.086379 0.605960 -34(CCTACCGA,+,0.00) -151(GGGAGGCGACGG,+,0.00) 561_WT_peak_5393 chr4 1724955 1725160 + 56 NA intron (NM_006342, intron 1 of 15) intron (NM_006342, intron 1 of 15) 1840 NM_006342 10460 Hs.104019 NM_006342 HPRD:05601 TACC3 ERIC-1|ERIC1 transforming, acidic coiled-coil containing protein 3 protein-coding 0.014634 0.529126 -61(TCGTGCCC,+,0.00) 561_WT_peak_1985 chr13 33001112 33001277 + 56 NA intron (NM_001286459, intron 1 of 5) L2c|LINE|L2 1121 NM_001286460 90634 Hs.732118 NM_052818 HPRD:12384 N4BP2L1 CG018 NEDD4 binding protein 2-like 1 protein-coding 0.054545 0.584337 -151(AAGCGGCT,+,0.00),-150(AGCGGCTT,-,0.00) -157(GGAGAGAAGCGG,+,0.00) 561_WT_peak_169 chr1 35544808 35545114 + 56 NA promoter-TSS (NM_024772) promoter-TSS (NM_024772) -3 NM_001289091 79830 Hs.471243 NM_024772 HPRD:15739 ZMYM1 MYM zinc finger, MYM-type 1 protein-coding 0.071895 0.599349 -89(AAGTCGCT,+,0.00),84(ATGCGGCT,+,0.00) -2(GCGGGGTCGGCG,+,0.00) -4(GGGCGGGGTC,+,0.00) 561_WT_peak_4927 chr22 40440336 40440507 + 56 NA promoter-TSS (NM_001024843) promoter-TSS (NM_001024843) -400 NM_001024843 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing 6B protein-coding 0.064327 0.523256 -5(CTCGGCCGCC,-,0.00) -11(AGCGACCT,-,0.00) -129(CGGCACGT,-,0.00) 561_WT_peak_2422 chr15 35261724 35262135 + 56 NA promoter-TSS (NM_014691) promoter-TSS (NM_014691) 66 NM_014691 9716 Hs.510958 NM_014691 HPRD:12468 AQR IBP160|fSAP164 aquarius intron-binding spliceosomal factor protein-coding 0.075426 0.618932 208(GGCGGCAGAG,+,0.00) 221(AGACACCT,-,0.00) -92(GCTGCGCA,+,0.00) -81(GCTGCCATGGCA,+,0.00),-79(TGCCATGGCAGC,-,0.00) 561_WT_peak_3487 chr18 34408808 34409065 + 56 NA promoter-TSS (NM_020776) promoter-TSS (NM_020776) -144 NM_020776 57536 Hs.4045 NM_020776 HPRD:17211 KIAA1328 - KIAA1328 protein-coding 0.124514 0.763566 22(CCGCGCAGGCGG,-,0.00) -142(TCGGCGCC,+,0.00) -63(CCCGCGGC,-,0.00),29(GGCGGGGG,+,0.00) -1(CCCTCTCGCCCC,+,0.00) 21(GCCGCGCA,+,0.00) -62(CCGCGGCCCCGC,-,0.00),1(CTCTCGCCCCGC,-,0.00),16(GGCCGGCCGCGC,-,0.00) -61(CGCGGCCCCGCC,-,0.00) 86(CGTGGCGG,+,0.00) 561_WT_peak_6748 chr7 92076609 92076798 + 56 NA promoter-TSS (NM_021167) promoter-TSS (NM_021167) -59 NM_021167 57798 Hs.21145 NM_021167 GATAD1 CMD2B|ODAG|RG083M05.2 GATA zinc finger domain containing 1 protein-coding 0.068783 0.652632 -59(CCGGTCAGGCGG,-,0.00),3(CCCCCACCCCGG,+,0.00) -51(GCGGTCGG,-,0.00) -43(GCTGCGGGGC,+,0.00) 561_WT_peak_3471 chr18 23670269 23670581 + 56 NA intron (NM_001007559, intron 1 of 10) CpG 186 NM_001007559 6760 Hs.129261 NM_005637 HPRD:02559 SS18 SSXT|SYT synovial sarcoma translocation, chromosome 18 protein-coding 0.096154 0.670927 -147(TCACCCTCTTCC,+,0.00),-75(CCCGCCTCCGCC,+,0.00) -52(GACTCCGGGCCC,-,0.00) -54(TCGACTCC,+,0.00) -44(GCCCGGCCCT,+,0.00) -146(CACCCTCTTCCG,-,0.00) -157(AAAAACCG,+,0.00) 140(CGGGTGAA,+,0.00) 75(CTCGGGGCCGCG,+,0.00) -68(CCGCCTCG,-,0.00) 65(GCCTCGCTGC,-,0.00) 561_WT_peak_957 chr10 38691376 38691568 + 56 NA intron (NR_027269, intron 1 of 3) CpG 308 NR_027269 285961 Hs.406568 NR_027269 SEPT7P9 CDC10L|SEPT7L|bA291L22.2 septin 7 pseudogene 9 pseudo 0.078125 0.709845 -21(GGCGGCCGGG,+,0.00) -162(TCATGCCG,+,0.00) -23(TGGGCGGC,-,0.00) -81(GGGCCCTGGCTG,+,0.00) 561_WT_peak_5638 chr4 170533394 170533638 + 56 NA 5' UTR (NM_012224, exon 1 of 34) 5' UTR (NM_012224, exon 1 of 34) 262 NM_012224 4750 Hs.481181 NM_012224 HPRD:06847 NEK1 NY-REN-55|SRPS2|SRPS2A|SRTD6 NIMA-related kinase 1 protein-coding 0.094262 0.628571 -134(GCGACGCC,+,0.00) -7(CGTTGCTA,+,0.00) -159(CGGGTTTG,-,0.00) 23(GGGCGGCGTT,+,0.00) 3(GGCCACGGCGGG,-,0.00) 561_WT_peak_1200 chr11 9082483 9082699 + 56 NA intron (NM_001170690, intron 7 of 17) intron (NM_001170690, intron 7 of 17) 29335 NR_049874 100847015 NR_049874 MIR5691 - microRNA 5691 ncRNA 0.013889 0.423963 -147(TCGCCGCC,+,0.00) -150(GCATCGCCGC,-,0.00) 561_WT_peak_2591 chr15 89090000 89090223 + 56 NA promoter-TSS (NM_017996) promoter-TSS (NM_017996) -199 NR_026645 55070 Hs.690871 NM_017996 HPRD:13140 DET1 - de-etiolated homolog 1 (Arabidopsis) protein-coding 0.017937 0.428571 -157(TCGAAGCC,+,0.00) 561_WT_peak_5406 chr4 6692120 6692369 + 56 NA Intergenic Intergenic -3322 NM_005980 6286 Hs.2962 NM_005980 S100P MIG9 S100 calcium binding protein P protein-coding 0.020080 0.604000 53(TGGCCTTCCCGG,+,0.00) -23(CCGACTGA,+,0.00) 25(GCGGCCTTGCCG,+,0.00) 561_WT_peak_4213 chr2 96823588 96823816 + 56 NA Intergenic Intergenic -12523 NM_004418 1844 Hs.1183 NM_004418 HPRD:04348 DUSP2 PAC-1|PAC1 dual specificity phosphatase 2 protein-coding 0.039474 0.650655 -140(AGGGCTGGGA,-,0.00) 8(TGGGCGGC,-,0.00) -88(CCGCCAAG,-,0.00) 561_WT_peak_5145 chr3 67706249 67706612 + 56 NA intron (NR_109993, intron 1 of 3) LTR12|LTR|ERV1 1309 NR_109992 101927111 Hs.518057 NR_109992 SUCLG2-AS1 - SUCLG2 antisense RNA 1 (head to head) ncRNA 0.046832 0.513736 561_WT_peak_5656 chr4 190862115 190862406 + 56 NA intron (NM_004477, intron 1 of 8) CpG 286 NM_004477 2483 Hs.203772 NM_004477 HPRD:03176 FRG1 FRG1A|FSG1 FSHD region gene 1 protein-coding 0.092784 0.671233 116(GTGCAGAGAGGG,-,0.00) -157(CAGAACCG,+,0.00),39(CGGCTTTG,-,0.00) -138(TCCGCGCA,+,0.00) 95(GGGCCGCGGT,+,0.00) -120(GGAGCCATGGCC,+,0.00) 90(AGGCCGGGCCGC,-,0.00) 561_WT_peak_4942 chr22 42000031 42000270 + 56 NA exon (NM_015704, exon 4 of 6) exon (NM_015704, exon 4 of 6) -14279 NM_002676 5372 Hs.75835 NM_002676 HPRD:03473 PMM1 Sec53 phosphomannomutase 1 protein-coding 0.004184 0.470833 19(ATGTGGCT,+,0.00) 561_WT_peak_4221 chr2 97202903 97203112 + 56 NA intron (NM_212481, intron 1 of 6) CpG 543 NM_212481 10865 Hs.920 NM_006673 HPRD:12481 ARID5A MRF-1|MRF1|RP11-363D14 AT rich interactive domain 5A (MRF1-like) protein-coding 0.105263 0.676190 -28(GACTCCGGGTCC,-,0.00) 27(GGGCTGCGCGGG,-,0.00) -53(CAGAACCG,+,0.00) 31(TGCGCGGG,-,0.00) -46(GCGGCGCCGCCG,+,0.00) -47(CGCGGCGCCGCC,+,0.00),-47(CGCGGCGCCGCC,-,0.00) 561_WT_peak_6961 chr8 29347976 29348341 + 56 NA Intergenic Intergenic -139891 NM_001394 1846 Hs.417962 NM_001394 HPRD:04123 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding 0.010959 0.500000 -40(CGGTTTGG,-,0.00) 561_WT_peak_4882 chr22 30988018 30988204 + 56 NA promoter-TSS (NM_014303) promoter-TSS (NM_014303) -184 NM_001243225 23481 Hs.517543 NM_014303 HPRD:05783 PES1 PES pescadillo ribosomal biogenesis factor 1 protein-coding 0.043011 0.475936 -22(GGACGGAGAGGG,-,0.00) 561_WT_peak_3456 chr18 19284531 19284761 + 56 NA 5' UTR (NM_138340, exon 1 of 9) 5' UTR (NM_138340, exon 1 of 9) 120 NM_138340 171586 Hs.397978 NM_138340 HPRD:12405 ABHD3 LABH3 abhydrolase domain containing 3 protein-coding 0.126087 0.735931 6(CGGACGCG,-,0.00) -50(GCGGGTCCTGCG,+,0.00) 10(CGCGGCGCCGCT,+,0.00),10(CGCGGCGCCGCT,-,0.00) 561_WT_peak_2863 chr16 58768137 58768332 + 56 NA promoter-TSS (NM_002080) promoter-TSS (NM_002080) 27 NM_002080 2806 Hs.599470 NM_002080 HPRD:00684 GOT2 KAT4|KATIV|mitAAT glutamic-oxaloacetic transaminase 2, mitochondrial protein-coding 0.102564 0.719388 -100(AACCGGCT,+,0.00) -146(GGCAGCCGCAGG,+,0.00) -2(GGCGGAGCGGCG,+,0.00) 561_WT_peak_1822 chr12 98987429 98987799 + 56 NA 5' UTR (NM_213611, exon 1 of 7) 5' UTR (NM_213611, exon 1 of 7) 211 NM_005888 5250 Hs.290404 NM_002635 HPRD:02654 SLC25A3 PHC|PTP solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 protein-coding 0.081081 0.654987 56(GGCGTGGA,-,0.00) 139(CGTCGCTC,+,0.00) 36(GCCGCCGTGACC,+,0.00) 561_WT_peak_2656 chr16 2255334 2255584 + 56 NA promoter-TSS (NM_001199174) promoter-TSS (NM_001199174) -273 NM_001199174 64223 Hs.29203 NM_022372 HPRD:17031 MLST8 GBL|GbetaL|LST8|POP3|WAT1 MTOR associated protein, LST8 homolog (S. cerevisiae) protein-coding 0.116000 0.721116 44(AACCGGCT,+,0.00) -53(GGCCTCGA,-,0.00) 35(GGGGCCGGGA,-,0.00) -140(CCCCCGCC,-,0.00),-106(CCCCCGCC,-,0.00) -38(GCTCCGGCTCCC,-,0.00) -2(TGCGGAGCCGCC,+,0.00) -98(CGCGCCATGGTC,+,0.00) 561_WT_peak_6834 chr7 127496916 127497120 + 56 NA intron (NM_014390, intron 12 of 23) intron (NM_014390, intron 12 of 23) -140544 NR_027330 27099 Hs.657377 NM_014411 SND1-IT1 C7orf54|NAG8|NSG-X SND1 intronic transcript 1 (non-protein coding) ncRNA 0.000000 0.385366 -21(TAGTGGCT,+,0.00) -99(GCTTCTTGTGTC,-,0.00) 561_WT_peak_5174 chr3 99979867 99980110 + 56 NA intron (NM_001199198, intron 1 of 18) CpG 327 NM_001199198 55773 Hs.477003 NM_018309 HPRD:07727 TBC1D23 NS4ATP1 TBC1 domain family, member 23 protein-coding 0.078189 0.659836 -35(GGCGTCGG,-,0.00) 10(GCCCTGCCCT,+,0.00) -61(TCTTGCCG,+,0.00) 561_WT_peak_1595 chr12 10766357 10766569 + 56 NA promoter-TSS (NM_018048) promoter-TSS (NM_018048) -255 NM_018048 55110 Hs.104650 NM_018048 MAGOHB MGN2|mago|magoh mago-nashi homolog B (Drosophila) protein-coding 0.018868 0.384977 561_WT_peak_3287 chr17 59299078 59299350 + 56 NA intron (NM_017679, intron 22 of 23) MIRb|SINE|MIR 177753 NR_125749 103689912 Hs.410998 NR_125749 TBX2-AS1 - TBX2 antisense RNA 1 ncRNA 0.011029 0.410256 -50(TTACCCGGAATG,+,0.00) -51(GTTACCCG,-,0.00) 561_WT_peak_2043 chr13 49106493 49106696 + 55 NA intron (NM_001286830, intron 1 of 13) CpG 798 NM_001268 1102 Hs.652712 NM_001268 HPRD:04631 RCBTB2 CHC1L|RLG regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 protein-coding 0.049261 0.558824 -55(GGGGTCGA,-,0.00),-51(TCGAGGCC,+,0.00) -64(GGGAGCCTAGGG,+,0.00) -109(GAGCCGGGCCGG,-,0.00),18(CAGGCAGGACGC,-,0.00) 561_WT_peak_3818 chr19 47458823 47459174 + 55 NA intron (NM_004491, intron 2 of 5) intron (NM_004491, intron 2 of 5) 37065 NM_004491 2909 Hs.509447 NM_004491 HPRD:05592 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding 0.005698 0.346591 176(AGGGTAAA,+,0.00) 561_WT_peak_6659 chr7 44677916 44678226 + 55 NA intron (NM_001003941, intron 2 of 8) intron (NM_001003941, intron 2 of 8) 31950 NM_002541 4967 Hs.488181 NM_002541 HPRD:08938 OGDH AKGDH|E1k|OGDC oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) protein-coding 0.003226 0.401929 561_WT_peak_7431 chr9 130186381 130186710 + 55 NA promoter-TSS (NM_001286697) promoter-TSS (NM_001286697) -108 NM_001286697 7633 Hs.522399 NM_007135 HPRD:01931 ZNF79 pT7 zinc finger protein 79 protein-coding 0.075988 0.569697 -46(AAGCCTCT,+,0.00) 42(CCCGCGGC,-,0.00),80(GCCGCGGG,+,0.00) -162(CGGCTAAA,+,0.00) 158(TGGGCGGT,-,0.00) 40(GCCCCGCGGC,-,0.00),80(GCCGCGGGGC,+,0.00) 561_WT_peak_5057 chr3 33840261 33840431 + 55 NA exon (NM_001162429, exon 1 of 18) exon (NM_001162429, exon 1 of 18) 283 NM_001162429 10015 Hs.475896 NM_013374 HPRD:06425 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding 0.111765 0.684211 -150(AAGCCGCT,+,0.00) -44(TCGGTCGT,-,0.00) -56(GCCGCGCC,+,0.00) -61(GCTGCGCCGC,+,0.00),-61(GCTGCGCCGC,-,0.00) 561_WT_peak_1149 chr10 115614499 115614936 + 55 NA promoter-TSS (NM_014881) promoter-TSS (NM_014881) 326 NM_198514 374354 Hs.369924 NM_198514 NHLRC2 - NHL repeat containing 2 protein-coding 0.100686 0.698630 3(CCGGCCTGCTCC,+,0.00) -66(GGGCCCGGCGGC,+,0.00) -22(CCCGGAGGCCGG,-,0.00),205(GCGCCCTCCCGC,+,0.00) -161(GGCGTGGA,-,0.00),45(TCGACGCC,+,0.00),157(GGCGTCGG,-,0.00) 243(CCGCTGGCGCCC,-,0.00) 238(TTGTGCCG,+,0.00) 24(CCTCGCTA,+,0.00) 233(CGGGTTTG,-,0.00) 14(CCCGCGCA,+,0.00) -69(CGCGGGCCCGGC,-,0.00),-68(GCGGGCCCGGCG,+,0.00),244(CGCTGGCGCCCC,-,0.00) 213(CCGCGAAG,-,0.00),228(CTAGGCGG,+,0.00) 561_WT_peak_6683 chr7 64466817 64467012 + 55 NA intron (NM_001007253, intron 1 of 1) intron (NM_001007253, intron 1 of 1) 210 NM_001007253 2086 Hs.250693 NM_001007253 HPRD:15919 ERV3-1 ERV-R|ERV3|ERVR|HERV-R|HERVR|envR endogenous retrovirus group 3, member 1 protein-coding 0.041026 0.632653 -129(AGCCACTT,-,0.00) -83(TGTCGGAC,+,0.00) -105(AGCCCCGCCC,-,0.00) 561_WT_peak_6583 chr7 6617073 6617246 + 55 NA promoter-TSS (NM_001134389) promoter-TSS (NM_001134389) 94 NM_001134389 55146 Hs.5268 NM_018106 HPRD:15719 ZDHHC4 ZNF374 zinc finger, DHHC-type containing 4 protein-coding 0.092486 0.718391 -138(CCCGGGAGGCGC,-,0.00),-101(CCGCCTCCGCGG,+,0.00) 561_WT_peak_5912 chr5 132083415 132083725 + 55 NA exon (NM_001287253, exon 1 of 6) exon (NM_001287253, exon 1 of 6) 433 NM_001039780 645121 Hs.522057 NM_001039780 ENSG00000205089 CCNI2 - cyclin I family, member 2 protein-coding 0.135484 0.755627 56(TGGCCCTCCTCG,+,0.00) -147(CGGCGCCAGCCG,+,0.00) 43(CGTCGCTG,+,0.00) -134(GAAAACCG,+,0.00) -137(CGGGAAAA,+,0.00) 122(GAAACTGGAGGC,+,0.00) -156(GGCGCGGT,-,0.00),-65(GCCGCGCA,+,0.00) -164(GCGGCCCCGGCG,+,0.00),-122(CGCGGTCCCCGC,-,0.00) -94(GCTCCGCGGC,-,0.00) 561_WT_peak_5844 chr5 86563871 86564072 + 55 NA promoter-TSS (NM_022650) promoter-TSS (NM_022650) -99 NM_002890 5921 Hs.664080 NM_002890 HPRD:00745 RASA1 CM-AVM|CMAVM|GAP|PKWS|RASA|RASGAP|p120GAP|p120RASGAP RAS p21 protein activator (GTPase activating protein) 1 protein-coding 0.049751 0.564356 -142(TGGCGGCT,+,0.00) -157(GTGAAGAAGCGG,+,0.00),-136(CTGAAGGAGCGG,+,0.00) 561_WT_peak_5633 chr4 164087273 164087396 + 55 NA intron (NM_138386, intron 1 of 7) intron (NM_138386, intron 1 of 7) 739 NM_138386 92345 Hs.129095 NM_138386 HPRD:10054 NAF1 - nuclear assembly factor 1 ribonucleoprotein protein-coding 0.048780 0.508065 561_WT_peak_2925 chr16 82204018 82204357 + 55 NA promoter-TSS (NM_005792) promoter-TSS (NM_005792) -358 NM_005792 10200 Hs.344400 NM_005792 HPRD:16111 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding 0.079646 0.676471 134(CAGCCCGGAGTC,+,0.00) -130(TCGCCTTCCCGG,+,0.00) -138(GCCGCGGG,+,0.00),158(GGCGGGGG,+,0.00) -116(CGTCGGCC,+,0.00) -144(CCCCGAGCCGCG,+,0.00) 6(GGGCCGTGTT,+,0.00),65(GGGTCGCTTT,+,0.00) -16(CCGCCACG,-,0.00) -113(CGGCCTGGCCCC,-,0.00) 561_WT_peak_510 chr1 150241422 150241622 + 55 NA promoter-TSS (NM_001243772) promoter-TSS (NM_001243772) 87 NM_001243771 51107 Hs.108408 NM_016022 ENSG00000117362 APH1A 6530402N02Rik|APH-1|APH-1A|CGI-78 APH1A gamma secretase subunit protein-coding 0.075000 0.646766 -18(AGCCGGTT,-,0.00) -2(TGGGCCGGGA,-,0.00) -21(TCGAGCCG,+,0.00) -91(GGGCGGAGCT,+,0.00) 561_WT_peak_4166 chr2 85554822 85555021 + 55 NA intron (NM_001206840, intron 1 of 3) CpG 498 NM_001206840 10618 Hs.593382 NM_006464 HPRD:04343 TGOLN2 TGN38|TGN46|TGN48|TGN51|TTGN2 trans-golgi network protein 2 protein-coding 0.055276 0.635000 -139(GCGGGAAGAAGG,-,0.00) -43(TGGGTCGG,-,0.00) -104(CGGGAGCAGCGG,+,0.00),-32(GGGAAGAAGCGA,+,0.00) -67(GGGAGACGATGG,+,0.00) 561_WT_peak_5751 chr5 54368637 54368913 + 55 NA Intergenic Intergenic -29699 NM_006144 3001 Hs.90708 NM_006144 HPRD:00771 GZMA CTLA3|HFSP granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3) protein-coding 0.003623 0.375451 561_WT_peak_5568 chr4 103748757 103749054 + 55 NA promoter-TSS (NM_181892) promoter-TSS (NM_181892) -195 NM_181887 7323 Hs.518773 NM_003340 HPRD:04269 UBE2D3 E2(17)KB3|UBC4/5|UBCH5C ubiquitin-conjugating enzyme E2D 3 protein-coding 0.080808 0.610738 35(GGGGGAGGGTGA,-,0.00) 84(AGAACCGGAAGG,+,0.00) 6(GGCGGGGG,+,0.00) -126(CAAGACCG,+,0.00) -79(GGGCCGAGTG,+,0.00) -45(CTTCTCGG,+,0.00) 561_WT_peak_1396 chr11 68227526 68227745 + 55 NA promoter-TSS (NM_001164164) promoter-TSS (NM_001164164) -551 NM_001164163 55291 Hs.503022 NM_018312 HPRD:10703 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6, regulatory subunit 3 protein-coding 0.054795 0.527273 -134(AGCCACCT,-,0.00) -63(GGCATCGA,-,0.00) -122(CAGGTAAA,+,0.00) 561_WT_peak_5776 chr5 65221581 65221875 + 55 NA promoter-TSS (NM_001253697) promoter-TSS (NM_001253697) -654 NM_001253701 55914 Hs.591774 NM_018695 HPRD:06090 ERBB2IP ERBIN|HEL-S-78|LAP2 erbb2 interacting protein protein-coding 0.125850 0.735593 -53(TCCCTCCCCT,+,0.00) -68(CCGCTCCCTCCG,-,0.00) -164(TTCACCCG,-,0.00) 51(CCTCCTGCTCCC,-,0.00) -18(GGCGCGGC,-,0.00) 16(CCGCGGCCCCGC,-,0.00) -16(CGCGGCGGCGCG,+,0.00),-16(CGCGGCGGCGCG,-,0.00),17(CGCGGCCCCGCA,-,0.00) -158(CGTCGCGG,+,0.00),73(CGTCTCGG,+,0.00) -131(GCCGCCGCGGCC,+,0.00) -15(GCGGCGGCGC,+,0.00) 561_WT_peak_2076 chr13 77903407 77903613 + 55 NA Intergenic CpG -2333 NM_015057 23077 Hs.591221 NM_015057 HPRD:10104 MYCBP2 PAM MYC binding protein 2, E3 ubiquitin protein ligase protein-coding 0.082524 0.599034 -13(TCCTCCTCCTCC,+,0.00) -160(GCTGCGCA,+,0.00) 561_WT_peak_5026 chr3 16553463 16553655 + 55 NA intron (NM_015150, intron 1 of 9) intron (NM_015150, intron 1 of 9) 1663 NM_015150 23180 Hs.98910 NM_015150 HPRD:17950 RFTN1 PIB10|PIG9|RAFTLIN raftlin, lipid raft linker 1 protein-coding 0.020833 0.528497 561_WT_peak_4449 chr2 204676359 204676542 + 55 NA Intergenic L2|LINE|L2 -56061 NM_001037631 1493 Hs.247824 NM_005214 HPRD:00474 CTLA4 CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte-associated protein 4 protein-coding 0.010929 0.586957 -164(AGAGGAGGGTGG,-,0.00) 561_WT_peak_131 chr1 27160086 27160292 + 55 NA intron (NM_032283, intron 2 of 7) intron (NM_032283, intron 2 of 7) 6988 NM_032283 84243 Hs.523710 NM_032283 ZDHHC18 DHHC-18|DHHC18 zinc finger, DHHC-type containing 18 protein-coding 0.029126 0.579710 -35(GTTTCCGGTCCG,-,0.00) -133(CCGGGGTGGCGG,-,0.00) -59(CGTGGCTA,+,0.00) 561_WT_peak_2971 chr17 1531907 1532144 + 55 NA promoter-TSS (NM_001284498) promoter-TSS (NM_001284498) 155 NM_152346 124935 Hs.160550 NM_152346 HPRD:15390 SLC43A2 LAT4 solute carrier family 43 (amino acid system L transporter), member 2 protein-coding 0.109705 0.697479 43(CGCCCGGC,-,0.00) -40(CCGCTTCTGCCC,-,0.00) -161(CCTCGGAC,+,0.00) -50(CCTTCGGCGGCC,-,0.00) -23(CCCTCGCCCCGG,-,0.00) 561_WT_peak_6859 chr7 138437267 138437458 + 55 NA intron (NM_130840, intron 10 of 20) intron (NM_130840, intron 10 of 20) 21420 NM_130841 50617 Hs.98967 NM_020632 HPRD:05576 ATP6V0A4 A4|ATP6N1B|ATP6N2|RDRTA2|RTA1C|RTADR|STV1|VPH1|VPP2 ATPase, H+ transporting, lysosomal V0 subunit a4 protein-coding 0.041885 0.609375 20(GACGTCGA,-,0.00) -95(CATCGGAC,+,0.00) 561_WT_peak_2714 chr16 18813105 18813357 + 55 NA promoter-TSS (NM_015161) promoter-TSS (NM_015161) -374 NM_015161 23204 Hs.634882 NM_015161 HPRD:09641 ARL6IP1 AIP1|ARL6IP|ARMER|SPG61 ADP-ribosylation factor-like 6 interacting protein 1 protein-coding 0.079365 0.648221 0(GGCGGAGGGCGG,-,0.00) 13(GACGCCGGGCCT,-,0.00) -155(AAGCGGTT,+,0.00),52(AGGTGGCT,+,0.00) 5(AGGGCGGGGA,-,0.00) -103(TCTTGCCG,+,0.00) 16(GCCGGGCCTGCG,+,0.00) 561_WT_peak_4626 chr20 35917963 35918275 + 55 NA promoter-TSS (NM_022077) promoter-TSS (NM_022077) 68 NM_022077 63905 Hs.6126 NM_022077 HPRD:14356 MANBAL - mannosidase, beta A, lysosomal-like protein-coding 0.112179 0.680511 -124(AGCCGGTT,-,0.00) -65(CCGGGGGAGCGG,-,0.00) 72(CGGCTGTCGCTC,-,0.00) -55(GGCGCGGC,-,0.00) -53(CGCGGCGGCGCG,+,0.00),-53(CGCGGCGGCGCG,-,0.00) -52(GCGGCGGCGC,+,0.00) 20(GTGGCCTGGCTT,+,0.00) 561_WT_peak_5020 chr3 15140383 15140739 + 55 NA promoter-TSS (NM_022340) promoter-TSS (NM_022340) 94 NM_022340 64145 Hs.475565 NM_022340 HPRD:15732 ZFYVE20 Rabenosyn-5 zinc finger, FYVE domain containing 20 protein-coding 0.095506 0.663866 78(AGCCGCCA,-,0.00),154(AGACGCCT,-,0.00) 124(GGCGGCGA,-,0.00),127(GGCGACGA,-,0.00),153(TAGACGCC,+,0.00) 92(TCGGTCGC,-,0.00),96(TCGCTCGG,-,0.00) 37(AGGCCCGGGC,-,0.00) 132(CGAAACCG,+,0.00) 133(GAAACCGGAAGA,+,0.00) 561_WT_peak_4210 chr2 96676117 96676399 + 55 NA promoter-TSS (NR_003698) promoter-TSS (NR_003698) -41 NR_003698 729234 Hs.720108 NR_003698 ENSG00000231584 FAHD2CP - fumarylacetoacetate hydrolase domain containing 2C, pseudogene pseudo 0.106383 0.706714 -51(CCGCCCGCCCCG,+,0.00) 20(CGGACGCG,-,0.00) -33(GCCCGCCCCT,+,0.00) -60(CCCCCGGC,-,0.00) -59(CCCCGGCGCCGC,-,0.00),-50(CGCCCGCCCCGC,-,0.00),-39(CACTGGGCCCGC,-,0.00) -99(AACGCGGCCG,-,0.00),-55(GGCGCCGCCC,-,0.00) 561_WT_peak_2875 chr16 68027358 68027509 + 55 NA intron (NM_022355, intron 1 of 10) intron (NM_022355, intron 1 of 10) 5988 NM_022355 64174 Hs.372633 NM_022355 HPRD:07011 DPEP2 MBD2 dipeptidase 2 protein-coding 0.039735 0.690789 -63(AGGTGGCT,+,0.00) -70(CCGACCCA,+,0.00) -157(GGGCGGATCC,+,0.00) -128(GCGGCCTGTCTT,+,0.00) 561_WT_peak_5208 chr3 112738217 112738825 + 55 NA promoter-TSS (NM_015412) promoter-TSS (NM_015412) 34 NM_015412 25871 Hs.591288 NM_015412 HPRD:08524 C3orf17 NET17 chromosome 3 open reading frame 17 protein-coding 0.090461 0.653530 88(AGGCCCGGCGGC,+,0.00),194(CGGGCCGGAAGG,+,0.00) -41(CGGCCTCCCCCG,+,0.00) -133(TCGACCCC,+,0.00) 212(GGGGTGGGGCTC,-,0.00) 222(TCGGGCGG,-,0.00) -94(CGGGCCGGGA,-,0.00) -71(CCCCCGCC,-,0.00),-11(CGCCCGGC,-,0.00),118(GGCGGGGG,+,0.00) 271(CGTGGGAC,+,0.00) 261(CGAGTAAA,+,0.00) 13(GCCGCGCC,+,0.00) 226(GCGGGGCCAGGA,+,0.00) 11(GGGCCGCGCC,+,0.00) 115(CGAGGCGG,+,0.00),322(CCGCGTAG,-,0.00) -49(GGGCCTGGCGGC,-,0.00) -110(CCTTCCCAGC,-,0.00),98(GCACCGCAGC,-,0.00) 561_WT_peak_710 chr1 207509907 207510209 + 55 NA exon (NM_000574, exon 7 of 10) exon (NM_000574, exon 7 of 10) 15241 NM_001300904 1604 Hs.126517 NM_000574 HPRD:00500 CD55 CR|CROM|DAF|TC CD55 molecule, decay accelerating factor for complement (Cromer blood group) protein-coding 0.000000 0.419142 561_WT_peak_5250 chr3 128902793 128903081 + 55 NA promoter-TSS (NM_001127196) promoter-TSS (NM_001127196) -127 NM_003418 7555 Hs.518249 NM_003418 HPRD:00311 CNBP CNBP1|DM2|PROMM|RNF163|ZCCHC22|ZNF9 CCHC-type zinc finger, nucleic acid binding protein protein-coding 0.107639 0.688581 -29(GGATCCGGGTCC,-,0.00) -126(CCCGCGGC,-,0.00) -66(TTTTCCCG,-,0.00) -115(GCCGCCCA,+,0.00) -133(AGAGCCGCCC,-,0.00) -12(CTTCTCGG,+,0.00) -62(CCCGCCGTGCCC,+,0.00) 561_WT_peak_6652 chr7 43908912 43909082 + 55 NA intron (NM_001204871, intron 4 of 6) CpG 148 NM_032014 64951 Hs.284286 NM_032014 HPRD:17593 MRPS24 MRP-S24|S24mt|bMRP-47|bMRP47 mitochondrial ribosomal protein S24 protein-coding 0.088235 0.713450 -56(CCGACTCG,-,0.00),-38(CCGAGTCG,-,0.00) 561_WT_peak_7434 chr9 130545311 130545544 + 55 NA Intergenic Intergenic -2685 NR_039767 100616250 NR_039767 miRBase:MI0016964 MIR3960 - microRNA 3960 ncRNA 0.030043 0.594017 -108(GGGTTTTG,-,0.00) 561_WT_peak_7417 chr9 125667535 125668017 + 55 NA promoter-TSS (NM_018835) promoter-TSS (NM_018835) -214 NM_001100588 54542 Hs.533499 NM_018835 HPRD:14726 RC3H2 MNAB|RNF164 ring finger and CCCH-type domains 2 protein-coding 0.066390 0.587992 -130(TCCTCCTCCTCC,+,0.00),-111(TCCGCCTCCTCC,+,0.00),-105(TCCTCCTCCTCC,+,0.00),-102(TCCTCCTCCTCC,+,0.00),-99(TCCTCCTCCTCC,+,0.00) -154(GGCGGCGA,-,0.00) 139(GCAAGCCGAAGG,+,0.00) -143(CCGCGACG,-,0.00) -153(GCGGCGAAGG,+,0.00) 561_WT_peak_6787 chr7 102134989 102135290 + 55 NA intron (NM_001277335, intron 13 of 19) CpG-24752 -15758 NM_006234 5439 Hs.654952 NM_006234 HPRD:16038 POLR2J POLR2J1|RPB11|RPB11A|RPB11m|hRPB14 polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa protein-coding 0.069767 0.692053 -133(CGTCCGCG,-,0.00) 34(CCTTAGGCTCCG,-,0.00) -67(GGCACAGGAAGC,+,0.00),90(GCTCCCTGGTTC,-,0.00) 561_WT_peak_6958 chr8 29087154 29087341 + 55 NA intron (NM_015254, intron 2 of 39) intron (NM_015254, intron 2 of 39) 33363 NM_015254 23303 Hs.444767 NM_015254 HPRD:09556 KIF13B GAKIN kinesin family member 13B protein-coding 0.005348 0.372340 561_WT_peak_5729 chr5 43121704 43121952 + 55 NA intron (NR_123720, intron 1 of 5) CpG 218 NM_001297548 7690 Hs.535804 NM_003432 ENSG00000172262 ZNF131 ZBTB35|pHZ-10 zinc finger protein 131 protein-coding 0.120968 0.734940 66(AGGCTCGGAGTC,+,0.00) -80(CCGGGCAGAAGG,-,0.00) -89(GAGCCCCGGCCG,+,0.00),-6(GCCCTGGCGCTC,-,0.00) -158(GGCGGGGG,+,0.00),77(CCCGCGGC,-,0.00) -67(CTTGGCGG,+,0.00),-47(CCGCCACG,-,0.00) -70(GGGCTTGGCGGG,-,0.00),-9(CGCGCCCTGGCG,+,0.00) 561_WT_peak_4657 chr20 46116075 46116311 + 55 NA Intergenic L1MEd|LINE|L1 -14408 NM_001174087 8202 Hs.592142 NM_006534 HPRD:03570 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding 0.008475 0.417722 51(CCACCCTACTCC,+,0.00) 561_WT_peak_2978 chr17 2239820 2240136 + 55 NA promoter-TSS (NM_001098509) promoter-TSS (NM_001098509) 700 NM_018128 55720 Hs.388170 NM_018128 HPRD:07681 TSR1 - TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) protein-coding 0.072785 0.561514 78(TCGTGCCG,+,0.00) -105(CGCCAAGCCGCG,+,0.00) 561_WT_peak_7379 chr9 106855881 106856138 + 55 NA promoter-TSS (NM_001265602) promoter-TSS (NM_001265602) -532 NM_001265602 10592 Hs.119023 NM_006444 HPRD:09277 SMC2 CAP-E|CAPE|SMC-2|SMC2L1 structural maintenance of chromosomes 2 protein-coding 0.066148 0.542636 -164(TAGGTCGG,-,0.00) -52(TTCCGACG,-,0.00),-14(GTCCGAGG,-,0.00) 4(GCGGAGCCAGGA,+,0.00) 2(GGGCGGAGCC,+,0.00) 7(GAGCCAGGACGC,-,0.00) 561_WT_peak_4173 chr2 86080881 86081058 + 55 NA intron (NM_001042437, intron 3 of 6) intron (NM_001042437, intron 3 of 6) 13824 NM_001042437 8869 Hs.415117 NM_003896 HPRD:05098 ST3GAL5 SATI|SIAT9|SIATGM3S|ST3GalV ST3 beta-galactoside alpha-2,3-sialyltransferase 5 protein-coding 0.011299 0.477528 -25(CCGTTTTG,-,0.00) 561_WT_peak_3592 chr19 5828417 5828651 + 55 NA TTS (NM_004558) TTS (NM_004558) 4716 NM_004558 4902 Hs.234775 NM_004558 HPRD:03604 NRTN NTN neurturin protein-coding 0.047009 0.612766 -23(CCTACGGGTCCC,-,0.00) -162(GGGGCCCAGCTG,+,0.00) 561_WT_peak_5074 chr3 42922569 42922739 + 55 NA Intergenic CpG -5021 NM_004391 1582 Hs.447793 NM_004391 HPRD:03705 CYP8B1 CP8B|CYP12 cytochrome P450, family 8, subfamily B, polypeptide 1 protein-coding 0.088235 0.678363 -21(GGCGGCTGAG,+,0.00) -123(CGGGAGGCGCGG,+,0.00) -118(GGCGCGGC,-,0.00) 561_WT_peak_1410 chr11 73881940 73882300 + 55 NA promoter-TSS (NM_001271593) promoter-TSS (NM_001271593) 12 NM_016147 51400 Hs.503251 NM_016147 HPRD:17864 PPME1 PME-1 protein phosphatase methylesterase 1 protein-coding 0.069444 0.598338 -134(AAGCGACT,+,0.00),-81(AGACGCCT,-,0.00) 70(CTCCTCCTTCCG,-,0.00) 1(GCTGCGCA,+,0.00) -16(GCTGGGGGGC,+,0.00) 561_WT_peak_5673 chr5 14809689 14809963 + 55 NA intron (NM_054027, intron 1 of 11) intron (NM_054027, intron 1 of 11) 16295 NR_039780 100616271 NR_039780 MIR4637 - microRNA 4637 ncRNA 0.007299 0.450909 0(AGGCCAGGGA,-,0.00) -135(GCTTTCTATTTC,-,0.00) 102(CGTCTCGG,+,0.00) 561_WT_peak_207 chr1 44412208 44412379 + 55 NA promoter-TSS (NM_014652) promoter-TSS (NM_014652) -185 NM_014652 9670 Hs.158497 NM_014652 HPRD:13742 IPO13 IMP13|KAP13|LGL2|RANBP13 importin 13 protein-coding 0.111111 0.720930 -77(CCGGCCTCCTCC,+,0.00) -150(TGACCCGGAATG,+,0.00) -57(CCGCCTTCCGGC,+,0.00) -9(GCGGCGGGGC,+,0.00) 561_WT_peak_4399 chr2 191879012 191879416 + 55 NA promoter-TSS (NM_007315) promoter-TSS (NM_007315) -238 NM_139266 6772 Hs.642990 NM_007315 HPRD:02777 STAT1 CANDF7|ISGF-3|STAT91 signal transducer and activator of transcription 1, 91kDa protein-coding 0.064356 0.548148 184(TTGACGCC,+,0.00) -89(GAGCTGCAGCCC,+,0.00) -110(GGCGGGGG,+,0.00) 67(TGGCGACG,-,0.00) -151(CGCTGCTCCGCC,-,0.00) 176(GGGCAGAGTT,+,0.00) 561_WT_peak_5071 chr3 42003024 42003256 + 55 NA intron (NM_017886, intron 1 of 36) CpG 520 NM_017886 54986 Hs.656192 NM_017886 HPRD:07928 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding 0.103448 0.660944 19(GGCGTCCA,-,0.00) -81(CCTCGCTA,+,0.00) -85(GCGGCCTCGCTA,+,0.00) 561_WT_peak_5531 chr4 84156970 84157244 + 55 NA Intergenic L1M2|LINE|L1 48960 NM_015697 27235 Hs.144304 NM_015697 HPRD:13062 COQ2 CL640|COQ10D1|MSA1 coenzyme Q2 4-hydroxybenzoate polyprenyltransferase protein-coding 0.003650 0.334545 -29(CCAAACCG,+,0.00) 561_WT_peak_5629 chr4 159644560 159644730 + 55 NA promoter-TSS (NM_005038) promoter-TSS (NM_005038) -93 NM_005038 5481 Hs.183958 NM_005038 HPRD:11875 PPID CYP-40|CYPD peptidylprolyl isomerase D protein-coding 0.094118 0.596491 -159(AGAACCGGAAGC,+,0.00) -152(GAAGCCATGGCC,+,0.00) -121(GCTCCCCCGC,-,0.00) 561_WT_peak_454 chr1 146373796 146374024 + 55 NA promoter-TSS (NM_001278141) promoter-TSS (NM_001278141) 53 NM_001278141 149013 Hs.666981 NM_001278141 ENSG00000186275 NBPF12 COAS1|KIAA1245 neuroblastoma breakpoint family, member 12 protein-coding 0.096491 0.659389 -144(GCAGCCGGGTCC,-,0.00),-56(GCAGCCGGGTCC,-,0.00),32(GCAGCCGGGTCC,-,0.00) -86(CCCGCGGC,-,0.00),2(CCCGCGGC,-,0.00) -82(CGGCCCGA,-,0.00),6(CGGCCCGA,-,0.00) 561_WT_peak_7521 chrX 39714535 39714851 + 55 NA Intergenic MIRb|SINE|MIR 242026 NM_017745 54880 Hs.659681 NM_017745 HPRD:06458 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding 0.009494 0.555205 -78(GAGAGCAGAAGG,+,0.00) 561_WT_peak_3838 chr19 49224208 49224444 + 55 NA intron (NM_017805, intron 11 of 11) intron (NM_017805, intron 11 of 11) -1350 NM_001130915 284358 Hs.191815 NM_182574 HPRD:08204 MAMSTR MASTR MEF2 activating motif and SAP domain containing transcriptional regulator protein-coding 0.059322 0.582278 -101(GGCGCGGT,-,0.00) 5(GGGCGGGGTC,+,0.00) 561_WT_peak_5743 chr5 52365516 52365753 + 55 NA intron (NR_073106, intron 16 of 29) intron (NR_073106, intron 16 of 29) 39968 NM_176806 4338 Hs.163645 NM_004531 HPRD:04750 MOCS2 MCBPE|MOCO1|MOCODB|MPTS molybdenum cofactor synthesis 2 protein-coding 0.021097 0.462185 24(AGCCACAT,-,0.00) 561_WT_peak_1032 chr10 70849874 70850112 + 55 NA intron (NR_036430, intron 1 of 1) intron (NR_036430, intron 1 of 1) 2165 NR_036430 5552 Hs.1908 NM_002727 HPRD:01513 SRGN PPG|PRG|PRG1 serglycin protein-coding 0.021008 0.451883 -106(CGGCACAA,-,0.00) 64(CAAAACCA,+,0.00) 561_WT_peak_5559 chr4 99916941 99917300 + 55 NA intron (NM_015143, intron 1 of 10) CpG 332 NM_015143 23173 Hs.480364 NM_015143 HPRD:10071 METAP1 MAP1A|MetAP1A methionyl aminopeptidase 1 protein-coding 0.111421 0.750000 130(GGGCGCCACCCG,+,0.00),154(GGGCTGGGGCGG,-,0.00) 24(CCCCCGGC,-,0.00),125(GGCGGGGG,+,0.00) 56(CGTCGCCA,+,0.00) 170(GGGCTGTGCGGG,-,0.00) 120(GCGGGGGCGGGG,+,0.00) -77(CGCTGCCCCGCG,-,0.00),184(CGCGTGGCCGCG,+,0.00) 28(CGGCCGCGTT,+,0.00) -2(CGAGTCGG,+,0.00),53(CCGCGTCG,-,0.00) 561_WT_peak_5441 chr4 36324571 36324867 + 55 NA intron (NM_001136536, intron 7 of 8) intron (NM_001136536, intron 7 of 8) 39075 NM_001170700 401124 Hs.363407 NM_001136536 DTHD1 - death domain containing 1 protein-coding 0.010135 0.404040 -82(AGGTTTTG,-,0.00) 561_WT_peak_3409 chr18 267885 268530 + 55 NA promoter-TSS (NM_005131) promoter-TSS (NM_005131) -148 NM_005131 9984 Hs.712543 NM_005131 HPRD:09498 THOC1 HPR1|P84|P84N5 THO complex 1 protein-coding 0.079070 0.622291 390(CTGGGCCGCC,-,0.00) 226(CTGCGTTCCCGG,+,0.00) -43(GGCGTCGG,-,0.00),237(GGCGTGGA,-,0.00) -76(CGCGTCCG,+,0.00),-74(CGTCCGCG,-,0.00) 81(CCGGTCGG,-,0.00) -124(TAGCGCCG,-,0.00),114(TAGCGACT,-,0.00) 48(CTCTCTGAGCCC,+,0.00) -41(CGTCGGAG,+,0.00) -63(CGGGCAAA,+,0.00),296(CGGGTAAA,+,0.00) 203(TGGGCGGC,-,0.00),253(GCCGCGCA,+,0.00) 2(GCGGCGCCTGCC,+,0.00) -26(CTCGGCTGCGCG,-,0.00) 326(GGGCCGCGCT,+,0.00) -29(CTTCTCGG,+,0.00),163(CTACTCGG,+,0.00) -1(GCTGCGGCGC,+,0.00) 395(CCGCCAGTCCGC,-,0.00) 561_WT_peak_435 chr1 144932082 144932315 + 55 NA 5' UTR (NM_001002811, exon 1 of 19) 5' UTR (NM_001002811, exon 1 of 19) 167 NM_001002811 9659 Hs.584841 NM_014644 HPRD:10482 PDE4DIP CMYA2|MMGL phosphodiesterase 4D interacting protein protein-coding 0.103004 0.662393 -52(GCTTCCGGCTCT,-,0.00) -112(AGCGGCTT,-,0.00),62(AGCCGCTT,-,0.00) -145(CGGGGATGGAGG,-,0.00) -7(CAAATCCG,+,0.00) -112(AGCGGCTTCGCG,-,0.00) 561_WT_peak_2091 chr13 103498158 103498636 + 55 NA 5' UTR (NM_000123, exon 1 of 15) 5' UTR (NM_000123, exon 1 of 15) 206 NM_000123 2073 Hs.258429 NM_000123 HPRD:00595 ERCC5 COFS3|ERCM2|UVDR|XPG|XPGC excision repair cross-complementation group 5 protein-coding 0.079498 0.615866 190(GGAGCAGGGAGG,-,0.00) 286(AGCCGCCT,-,0.00) 130(TAGTGCCG,+,0.00) -26(TAGCGGCG,-,0.00) 233(GTCCGTCG,-,0.00) 148(GAAAACCG,+,0.00) -137(GGGCCCATTT,+,0.00) 218(CTAGGCGG,+,0.00) 561_WT_peak_589 chr1 161432645 161432842 + 55 NA Intergenic CpG -42462 NM_021642 2212 Hs.352642 NM_021642 HPRD:00906 FCGR2A CD32|CD32A|CDw32|FCG2|FCGR2|FCGR2A1|FcGR|IGFR2 Fc fragment of IgG, low affinity IIa, receptor (CD32) protein-coding 0.086294 0.717172 -62(GCGGGAGGGCGG,-,0.00) -153(GCCGCGGG,+,0.00) -17(GTCCGAGG,-,0.00) -14(CGAGGCGG,+,0.00) -127(GGCCAAGGGGGC,-,0.00) 561_WT_peak_5770 chr5 64064263 64064453 + 55 NA promoter-TSS (NM_001297644) promoter-TSS (NM_001297644) 138 NM_173829 285672 Hs.69504 NM_173829 HPRD:08210 SREK1IP1 P18SRP|SFRS12IP1 SREK1-interacting protein 1 protein-coding 0.063158 0.602094 -147(CCTTGCGCTCCC,-,0.00) 561_WT_peak_6959 chr8 29207786 29208265 + 55 NA 5' UTR (NM_001394, exon 1 of 4) 5' UTR (NM_001394, exon 1 of 4) 242 NM_001394 1846 Hs.417962 NM_001394 HPRD:04123 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding 0.110647 0.683333 7(TCCCCTTCCTCC,+,0.00) -110(GAACCCGGGCCG,-,0.00) -81(GGCGGGCGAG,+,0.00),53(CTCGGGCGCC,-,0.00) -139(AGGCGGCT,+,0.00),47(AGCGGCCT,-,0.00) 289(CCGCGCTCCCGG,+,0.00),298(CGGGGGAGGGGG,-,0.00) -84(AGGGGCGGGC,-,0.00) 65(GCCGGGCG,+,0.00) -7(CCTCTTCTTCCC,-,0.00),8(CCCCTTCCTCCC,-,0.00) -141(CGAGGCGG,+,0.00),-101(CCGCCTAG,-,0.00) 63(CAGCCGGGCGGC,-,0.00) 561_WT_peak_2026 chr13 45563533 45563713 + 55 NA promoter-TSS (NM_012345) promoter-TSS (NM_012345) -10 NM_012345 26747 Hs.525006 NM_012345 HPRD:05073 NUFIP1 NUFIP|bA540M5.1 nuclear fragile X mental retardation protein interacting protein 1 protein-coding 0.077778 0.563536 -16(TCGGCGCC,+,0.00) -142(CTAGTCGG,+,0.00) 561_WT_peak_4523 chr2 241505127 241505439 + 55 NA Intergenic Intergenic -2721 NM_018226 57140 Hs.5345 NM_018226 RNPEPL1 - arginyl aminopeptidase (aminopeptidase B)-like 1 protein-coding 0.044872 0.635783 118(CCCGCGGC,-,0.00) -103(CGGCACCA,-,0.00) 120(CGCGGCTCAGCC,-,0.00) -82(ACCGCGGCCC,-,0.00) 561_WT_peak_3180 chr17 40440282 40440484 + 55 NA 5' UTR (NM_003152, exon 2 of 20) 5' UTR (NM_003152, exon 2 of 20) 309 NM_001288720 6776 Hs.437058 NM_003152 HPRD:03301 STAT5A MGF|STAT5 signal transducer and activator of transcription 5A protein-coding 0.118812 0.758621 -111(CCGCCCGCCGGG,+,0.00) -8(GGGCTCGCGCGC,-,0.00) -120(CGCCCGGC,-,0.00) -30(GGGCTGGGAGGG,-,0.00) -115(GGCGCCGCCC,-,0.00) 561_WT_peak_788 chr1 231376698 231376841 + 55 NA promoter-TSS (NM_014236) promoter-TSS (NM_014236) -150 NM_014236 8443 Hs.498028 NM_014236 HPRD:04120 GNPAT DAP-AT|DAPAT|DHAPAT glyceronephosphate O-acyltransferase protein-coding 0.062937 0.611111 -39(GGCGTGGA,-,0.00) 561_WT_peak_5799 chr5 70220759 70221151 + 55 NA exon (NM_000344, exon 1 of 9) exon (NM_000344, exon 1 of 9) 187 NM_000344 6606 Hs.535788 NM_000344 HPRD:02646 SMN1 BCD541|GEMIN1|SMA|SMA1|SMA2|SMA3|SMA4|SMA@|SMN|SMNT|T-BCD541|TDRD16A survival of motor neuron 1, telomeric protein-coding 0.094388 0.620865 -99(CGGTCCTCCCGG,+,0.00) 122(CGCTCTCAGCAC,+,0.00) -2(CGGGTTTG,-,0.00) -14(GCTGCGCA,+,0.00),72(GGCGCGGC,-,0.00) 204(GGTCCGCGTT,+,0.00) 561_WT_peak_6894 chr7 149321575 149321642 + 55 NA intron (NR_027788, intron 1 of 7) CpG 273 NR_027788 79970 Hs.520785 NM_024910 HPRD:07791 ZNF767P ZNF767 zinc finger family member 767, pseudogene pseudo 0.179104 0.764706 -130(CGTGCGCG,-,0.00) -147(AATCCAGGCCGC,-,0.00) 561_WT_peak_478 chr1 148645735 148646057 + 55 NA intron (NR_104217, intron 2 of 17) MLT1N2|LTR|ERVL-MaLR 85049 NM_173638 284565 Hs.523572 NM_173638 HPRD:14710 NBPF15 AB14|AG3|NBPF16 neuroblastoma breakpoint family, member 15 protein-coding 0.006211 0.455108 561_WT_peak_5959 chr5 140027256 140027531 + 55 NA promoter-TSS (NM_002488) promoter-TSS (NM_002488) 9 NM_006083 3550 Hs.421245 NM_006083 HPRD:02771 IK CSA2|RED IK cytokine, down-regulator of HLA II protein-coding 0.061818 0.528986 -74(TTGGTCGG,-,0.00) 20(CGGTGTTG,-,0.00) -145(GGGGTAAA,+,0.00) -61(AAAACAGGAAGC,+,0.00) 561_WT_peak_3698 chr19 19976935 19977368 + 55 NA intron (NM_021047, intron 1 of 3) intron (NM_021047, intron 1 of 3) 437 NM_021047 56242 Hs.301059 NM_021047 ZNF253 BMZF-1|BMZF1|ZNF411 zinc finger protein 253 protein-coding 0.046189 0.536866 -134(TGGCGGCT,+,0.00) 166(CGCGTCCG,+,0.00) 75(TGGTGCCG,+,0.00) 168(CGTCCGAC,+,0.00),169(GTCCGACC,-,0.00) -56(CGCAGCACCGCG,-,0.00) 561_WT_peak_5319 chr3 170587448 170587615 + 54 NA intron (NM_001099645, intron 1 of 3) intron (NM_001099645, intron 1 of 3) 514 NM_001099645 200916 Hs.380933 NM_001099645 ENSG00000163584 RPL22L1 - ribosomal protein L22-like 1 protein-coding 0.047904 0.541667 -46(CGGCCCGA,-,0.00) -54(CGTCAGAC,+,0.00) -50(AGACCGGCCC,-,0.00) -105(GGCCATCGCGGG,-,0.00) 561_WT_peak_83 chr1 17230743 17230923 + 54 NA Intergenic Intergenic -17612 NM_014675 9696 Hs.309403 NM_014675 HPRD:16758 CROCC ROLT ciliary rootlet coiled-coil, rootletin protein-coding 0.038889 0.497238 -110(CGCCCGGC,-,0.00) 5(GCTTCCTTTTTG,-,0.00) -114(ACCGCGCC,+,0.00) 561_WT_peak_278 chr1 67628724 67628910 + 54 NA Intergenic Intergenic -3352 NM_144701 149233 Hs.677426 NM_144701 HPRD:16249 IL23R - interleukin 23 receptor protein-coding 0.000000 0.443850 561_WT_peak_5507 chr4 77996818 77997012 + 54 NA 5' UTR (NM_006835, exon 1 of 7) 5' UTR (NM_006835, exon 1 of 7) 210 NM_006835 10983 Hs.518827 NM_006835 HPRD:16690 CCNI CCNI1|CYC1|CYI cyclin I protein-coding 0.118557 0.758974 -135(TGGGTCGG,-,0.00),-131(TCGGTCAG,-,0.00) -104(CCCCCGGC,-,0.00),-39(GGCGGGGG,+,0.00),-22(GGCGGGGG,+,0.00) -29(GGGGAGAGGCGG,+,0.00) -72(GGGTTGGGAGGG,-,0.00) 9(CGGGGAAA,+,0.00) 561_WT_peak_1281 chr11 47885062 47885167 + 54 NA Intergenic Intergenic -15057 NM_015231 23279 Hs.744107 NM_015231 HPRD:16254 NUP160 - nucleoporin 160kDa protein-coding 0.009524 0.349057 561_WT_peak_322 chr1 92951563 92951786 + 54 NA promoter-TSS (NM_001127216) promoter-TSS (NM_001127216) -46 NM_001127216 2672 Hs.73172 NM_005263 HPRD:07527 GFI1 GFI-1|GFI1A|SCN2|ZNF163 growth factor independent 1 transcription repressor protein-coding 0.085202 0.580357 45(GGCGGCCGGG,+,0.00) 42(TCGGGCGG,-,0.00) 49(GCCGGGCG,+,0.00) 15(CCCTCCCAGACC,+,0.00) 40(CGTCGGGC,+,0.00) -33(CAAAACCA,+,0.00) -142(CGCGGGCACCGC,-,0.00) 561_WT_peak_2603 chr15 91141008 91141232 + 54 NA intron (NM_001042574, intron 3 of 14) L1M6|LINE|L1 -62345 NR_120371 101929765 Hs.615348 NR_120371 ENSG00000245479 LOC101929765 - uncharacterized LOC101929765 ncRNA 0.000000 0.408889 -113(GAAACAGGATGT,+,0.00) 561_WT_peak_4897 chr22 36902979 36903301 + 54 NA promoter-TSS (NM_024955) promoter-TSS (NM_024955) 8 NM_001102371 80020 Hs.387601 NM_024955 HPRD:08666 FOXRED2 ERFAD FAD-dependent oxidoreductase domain containing 2 protein-coding 0.142857 0.761610 -157(AGCCGCCA,-,0.00) -130(CCGGCCTCCCCG,+,0.00),-129(CGGCCTCCCCGC,+,0.00) 137(GGGCTAGCGCGC,-,0.00) 23(CGTGCGCG,-,0.00) -115(CCGACCGA,+,0.00) 36(CGGCACGC,-,0.00) 25(TGCGCGGC,-,0.00),142(AGCGCGCA,+,0.00) -36(CGCTTGCTCCGC,-,0.00),-25(CGGCGGCTCCGC,-,0.00) -24(GGCGGCTCCGCC,-,0.00),107(CGCTGCTCCGGG,-,0.00),144(CGCGCACCCGCG,+,0.00) -21(GGCTCCGCCC,-,0.00),12(GGGCGGGGTC,+,0.00) -156(GCCGCCAGGTCC,+,0.00) -31(GCTCCGCGGC,-,0.00) 561_WT_peak_2302 chr14 76618621 76618825 + 54 NA intron (NM_017926, intron 1 of 9) intron (NM_017926, intron 1 of 9) 495 NM_017926 55668 Hs.410231 NM_017926 HPRD:16594 GPATCH2L C14orf118 G patch domain containing 2-like protein-coding 0.053922 0.600000 -86(CCCCGATCCCGG,+,0.00) 561_WT_peak_5678 chr5 32312816 32313089 + 54 NA 5' UTR (NM_001294344, exon 1 of 14) 5' UTR (NM_001294344, exon 1 of 14) 162 NM_001040446 54545 Hs.481836 NM_019061 HPRD:05933 MTMR12 3-PAP|PIP3AP myotubularin related protein 12 protein-coding 0.139194 0.770073 -162(CCCGGCCGCC,-,0.00) 50(TAGCGGCT,+,0.00) -139(CCGCCTGCGCGG,+,0.00) -147(CCGACGCC,+,0.00) 53(CGGCTGGGGCTC,-,0.00) -111(GGCGTACG,+,0.00),-10(CGCGGACG,+,0.00) -101(CGACACGA,-,0.00),-75(TGGTGCCG,+,0.00) -18(CAGCGACG,-,0.00) -149(GCCCGACG,-,0.00) -134(TGCGCGGC,-,0.00) 60(GGCTCCGCCC,-,0.00) -32(GCCGCCCTGGGA,+,0.00) -19(GCAGCGACGC,+,0.00) 561_WT_peak_5827 chr5 78525449 78525690 + 54 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -6356 NM_152405 133746 Hs.482605 NM_152405 HPRD:05045 JMY WHDC1L3 junction mediating and regulatory protein, p53 cofactor protein-coding 0.008299 0.433884 561_WT_peak_6333 chr6 43351560 43352065 + 54 NA Intergenic LTR67B|LTR|ERVL -14631 NM_014345 24149 Hs.509718 NM_014345 HPRD:11707 ZNF318 TZF|ZFP318 zinc finger protein 318 protein-coding 0.015842 0.442688 -87(TACCGACG,-,0.00) 301(CACCCAGGCCGG,-,0.00) 561_WT_peak_7370 chr9 100819102 100819281 + 54 NA exon (NM_018946, exon 1 of 6) exon (NM_018946, exon 1 of 6) 232 NM_018946 54187 Hs.522310 NM_018946 HPRD:07285 NANS HEL-S-100|SAS N-acetylneuraminic acid synthase protein-coding 0.106145 0.722222 -7(CCGGGAGGGGCG,-,0.00) -6(CGGGAGGGGCGG,+,0.00) 561_WT_peak_2500 chr15 58837692 58837874 + 54 NA intron (NM_000236, intron 4 of 8) intron (NM_000236, intron 4 of 8) -46849 NR_120338 101928694 Hs.655781 NR_120338 ENSG00000259293 LOC101928694 - uncharacterized LOC101928694 ncRNA 0.027473 0.453552 -141(TTTCCCCG,-,0.00) 561_WT_peak_6535 chr6 158589462 158589759 + 54 NA promoter-TSS (NR_073096) promoter-TSS (NR_073096) 231 NM_207118 404672 Hs.356224 NM_207118 HPRD:10581 GTF2H5 C6orf175|TFB5|TFIIH|TGF2H5|TTD|TTD-A|TTDA|bA120J8.2 general transcription factor IIH, polypeptide 5 protein-coding 0.050505 0.610738 17(TCGCCCTGCGCC,+,0.00) -60(CTCTCCGGGCCC,-,0.00) 56(GGCGTACG,+,0.00),58(CGTACGCT,-,0.00) 561_WT_peak_4790 chr21 37692861 37693077 + 54 NA intron (NM_015358, intron 1 of 16) CpG 482 NM_015358 23515 Hs.421150 NM_015358 HPRD:10316 MORC3 NXP2|ZCW5|ZCWCC3 MORC family CW-type zinc finger 3 protein-coding 0.125000 0.746544 -6(CCGGGGGCGGGG,-,0.00) -64(GGCGTCGT,-,0.00),-18(GGCCTCGA,-,0.00),-14(TCGACGTC,+,0.00) -141(CGTCCGCG,-,0.00) -113(TCGGTCTG,-,0.00) -97(GCCGCGGG,+,0.00),-1(GGCGGGGG,+,0.00) -53(GGGAGGGAGCGG,+,0.00) -103(CTCGGGGCCGCG,+,0.00) -97(GCCGCGGGGC,+,0.00) 17(CGGGCCTGCCTG,+,0.00) 561_WT_peak_5021 chr3 15247760 15247930 + 54 NA promoter-TSS (NR_027927) promoter-TSS (NR_027927) 112 NM_014296 23473 Hs.595234 NM_014296 HPRD:05908 CAPN7 CALPAIN7|PALBH calpain 7 protein-coding 0.129412 0.736842 -146(GGCGGCCGGG,+,0.00) -6(TCGCCGCC,+,0.00) -34(CCGCTCCTTCCG,-,0.00) -117(GGGCTGAGGGGC,-,0.00) -108(GGCGCGGC,-,0.00) -106(CGCGGCTTCGCG,-,0.00) -157(CCGCGAAG,-,0.00),-101(CTTCGCGG,+,0.00) 561_WT_peak_294 chr1 78148306 78148502 + 54 NA promoter-TSS (NM_015534) promoter-TSS (NM_015534) -61 NM_015534 26009 Hs.480506 NM_015534 HPRD:15907 ZZZ3 ATAC1 zinc finger, ZZ-type containing 3 protein-coding 0.066327 0.492386 561_WT_peak_6734 chr7 76751099 76751274 + 54 NA promoter-TSS (NM_020879) promoter-TSS (NM_020879) -748 NM_020879 57639 Hs.113940 NM_020879 HPRD:11150 CCDC146 - coiled-coil domain containing 146 protein-coding 0.131429 0.750000 -155(TCCACGCC,+,0.00) -57(CCGACCGA,+,0.00) -70(GCCGCGCC,+,0.00) -8(GCCGGGCCAGGC,+,0.00) 561_WT_peak_5342 chr3 183966532 183966713 + 54 NA promoter-TSS (NM_032331) promoter-TSS (NM_032331) 137 NM_005787 10195 Hs.478481 NM_005787 HPRD:03067 ALG3 CDG1D|CDGS4|D16Ertd36e|NOT56L|Not56 ALG3, alpha-1,3- mannosyltransferase protein-coding 0.093923 0.703297 -71(AGCAGGCGCCGC,-,0.00) 4(CGGCCGCGTT,+,0.00) 561_WT_peak_5956 chr5 139722064 139722235 + 54 NA intron (NM_001945, intron 3 of 5) intron (NM_001945, intron 3 of 5) 4039 NM_001945 1839 Hs.799 NM_001945 HPRD:00526 HBEGF DTR|DTS|DTSF|HEGFL heparin-binding EGF-like growth factor protein-coding 0.017544 0.500000 -149(TTCCCCTCCTCC,+,0.00) 561_WT_peak_7119 chr8 119068629 119068814 + 54 NA intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 55337 NM_000127 2131 Hs.492618 NM_000127 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding 0.016216 0.467742 561_WT_peak_911 chr10 22622367 22622583 + 54 NA Intergenic Intergenic -11899 NM_172242 9576 Hs.655170 NM_012443 HPRD:09305 SPAG6 CT141|Repro-SA-1|pf16 sperm associated antigen 6 protein-coding 0.023148 0.396313 27(AAGTCGCT,+,0.00),28(AGTCGCTT,-,0.00) -76(TCGACGAC,+,0.00) 561_WT_peak_1051 chr10 75490113 75490490 + 54 NA promoter-TSS (NR_048575) promoter-TSS (NR_048575) -29 NR_026592 729096 Hs.709171 NR_026592 BMS1P4 BMS1LP4 BMS1 pseudogene 4 pseudo 0.095491 0.640212 -160(TGACCCGGAGGA,+,0.00) -75(CCCGCGGC,-,0.00) 0(TCGCGCCG,+,0.00) 561_WT_peak_1338 chr11 64781662 64781838 + 54 NA intron (NR_037650, intron 1 of 10) CpG 165 NR_037650 100528018 Hs.80132 NR_037650 ARL2-SNX15 - ARL2-SNX15 readthrough (NMD candidate) ncRNA 0.107955 0.706215 -38(CCGGGCAGGCGG,-,0.00) -25(GCCGGGCG,+,0.00) -8(GGGAGCGGAACG,+,0.00) 561_WT_peak_35 chr1 6663256 6663444 + 54 NA promoter-TSS (NM_014851) promoter-TSS (NM_014851) -421 NM_014851 9903 Hs.7764 NM_014851 HPRD:17239 KLHL21 - kelch-like family member 21 protein-coding 0.053191 0.608466 -156(CGGCCCGGCTGC,+,0.00) -71(GGGCGCCGGCCC,+,0.00) -68(CGCCGGCCCAGG,-,0.00) -122(AGCTCGGCCC,-,0.00) -157(CCGGCCCGGCTG,+,0.00) 561_WT_peak_6009 chr5 159894834 159895079 + 54 NA Intergenic Intergenic -6453 NR_036095 100422938 NR_036095 MIR3142 - microRNA 3142 ncRNA 0.053061 0.666667 -111(CGGGGGAGGCTG,-,0.00) 40(CCCCCTCAGCTC,+,0.00) -154(CAGACAGGAAGC,+,0.00) -63(AGCGCGCA,+,0.00) 44(CTCAGCTCCGCG,-,0.00) 561_WT_peak_5350 chr3 186600726 186600920 + 54 NA Intergenic MER44B|DNA|TcMar-Tigger -26911 NR_046662 100874095 Hs.80485 NR_046662 ENSG00000226482 ADIPOQ-AS1 - ADIPOQ antisense RNA 1 ncRNA 0.005155 0.410256 561_WT_peak_5596 chr4 140098538 140098719 + 54 NA Intergenic CpG -37998 NM_201999 1998 Hs.634040 NM_006874 HPRD:16856 ELF2 EU32|NERF|NERF-1A|NERF-1B|NERF-1a,b|NERF-2 E74-like factor 2 (ets domain transcription factor) protein-coding 0.099448 0.664835 -11(CCGCCTTCCCAG,+,0.00) -16(CAAACCCG,+,0.00) -2(CAGGTAAA,+,0.00) -112(CGCGGGGCCCCG,+,0.00) -136(AACGCGGGCC,-,0.00) -106(GCCCCGCCGC,-,0.00) 561_WT_peak_2672 chr16 3332944 3333254 + 54 NA promoter-TSS (NM_005741) promoter-TSS (NM_005741) -388 NM_005741 10127 Hs.611475 NM_005741 HPRD:05008 ZNF263 FPM315|ZKSCAN12|ZSCAN44 zinc finger protein 263 protein-coding 0.067742 0.630225 17(ATTTCCGGGTCT,-,0.00) -140(TCCCTGGCCT,+,0.00) -34(GGGGCCTGGCTT,+,0.00) 561_WT_peak_2465 chr15 45021277 45021475 + 54 NA non-coding (NR_125376, exon 1 of 2) non-coding (NR_125376, exon 1 of 2) 190 NR_125376 100419583 Hs.489254 NR_125376 LOC100419583 - ring finger protein 4 pseudogene pseudo 0.060606 0.668342 -70(CCTCCTTCCCAG,+,0.00) -93(TCCCTGGCCT,+,0.00),7(AGGGCCGGGA,-,0.00) -67(CCTTCCCAGCCC,+,0.00) -67(CCTTCCCAGC,-,0.00) -51(CAGCCAGGCACC,-,0.00) 561_WT_peak_2362 chr14 100545424 100545635 + 54 NA intron (NM_016337, intron 1 of 13) intron (NM_016337, intron 1 of 13) 13778 NM_016337 51466 Hs.125867 NM_016337 HPRD:10942 EVL RNB6 Enah/Vasp-like protein-coding 0.018957 0.547170 561_WT_peak_4669 chr20 48151620 48152066 + 54 NA intron (NM_000961, intron 5 of 9) L1M5|LINE|L1 32864 NM_000961 5740 Hs.302085 NM_000961 HPRD:09046 PTGIS CYP8|CYP8A1|PGIS|PTGI prostaglandin I2 (prostacyclin) synthase protein-coding 0.002242 0.371365 89(AACCACTT,-,0.00) 23(TGGTTTTG,-,0.00),86(CAAAACCA,+,0.00) 561_WT_peak_5569-2 chr4 103789733 103789769 + 54 NA promoter-TSS (NM_001008388) promoter-TSS (NM_001008388) 299 NM_181893 7323 Hs.518773 NM_003340 HPRD:04269 UBE2D3 E2(17)KB3|UBC4/5|UBCH5C ubiquitin-conjugating enzyme E2D 3 protein-coding 0.000000 0.540541 561_WT_peak_384 chr1 112289966 112290198 + 54 NA non-coding (NR_038951, exon 3 of 3) non-coding (NR_038951, exon 3 of 3) 7619 NR_038951 100506343 Hs.485810 NR_038951 ENSG00000227811 FAM212B-AS1 - FAM212B antisense RNA 1 ncRNA 0.012931 0.519313 561_WT_peak_6577 chr7 4814966 4815136 + 54 NA promoter-TSS (NM_014855) promoter-TSS (NM_014855) -211 NM_014855 9907 Hs.558440 NM_014855 AP5Z1 KIAA0415|SPG48|zeta adaptor-related protein complex 5, zeta 1 subunit protein-coding 0.105882 0.701754 -83(GGGGTCGA,-,0.00),-17(GGCGCCGA,-,0.00) -3(CCCCCGGC,-,0.00) 561_WT_peak_5853 chr5 93913663 93913899 + 54 NA intron (NM_173665, intron 2 of 4) intron (NM_173665, intron 2 of 4) 40528 NM_173665 285600 Hs.425123 NM_173665 HPRD:11337 KIAA0825 C5orf36 KIAA0825 protein-coding 0.000000 0.350211 561_WT_peak_4300 chr2 131130037 131130344 + 54 NA intron (NM_014369, intron 13 of 14) CpG-15539 16610 NM_001142370 26469 Hs.516390 NM_014369 HPRD:05961 PTPN18 BDP1|PTP-HSCF protein tyrosine phosphatase, non-receptor type 18 (brain-derived) protein-coding 0.097720 0.724026 10(CGCCCCGGAAGC,+,0.00) -59(GGCGGCCGCG,+,0.00) -41(AGCCGCTA,-,0.00) -55(GCCGCGGG,+,0.00),127(CGCCCGGC,-,0.00) 80(GCCGCGCC,+,0.00) 1(CCCTGGCCACGC,-,0.00) -65(GGCCCTGGCGGC,-,0.00) -158(GCTGCCTGGCCG,+,0.00),-157(CTGCCTGGCCGC,-,0.00) 561_WT_peak_4541 chr20 1640995 1641220 + 54 NA Intergenic Intergenic -2682 NM_001039508 55423 Hs.590883 NM_018556 ENSG00000089012 SIRPG CD172g|SIRP-B2|SIRPB2|SIRPgamma|bA77C3.1 signal-regulatory protein gamma protein-coding 0.004444 0.349558 561_WT_peak_6860 chr7 138720499 138720774 + 54 NA exon (NM_080660, exon 1 of 5) exon (NM_080660, exon 1 of 5) 139 NM_080660 92092 Hs.512833 NM_080660 HPRD:14440 ZC3HAV1L C7orf39 zinc finger CCCH-type, antiviral 1-like protein-coding 0.116364 0.742754 -96(TCGGCCTCCGCG,+,0.00) -97(CTCGGCCTCC,-,0.00) -121(ACCGCCCA,+,0.00),-114(ACCGCGCC,+,0.00),17(GCCGCGCA,+,0.00) -101(CCGCCTCG,-,0.00) -102(GCCGCCTCGGCC,+,0.00),44(GCCGCCGTGGGC,+,0.00),93(TCCGCCATGGTC,+,0.00) 561_WT_peak_1457 chr11 94801786 94801799 + 54 NA 3' UTR (NM_032102, exon 1 of 1) 3' UTR (NM_032102, exon 1 of 1) 1751 NR_103726 10929 Hs.476680 NM_032102 SRSF8 DSM-1|SFRS2B|SRP46 serine/arginine-rich splicing factor 8 protein-coding 0.000000 0.357143 561_WT_peak_1968 chr13 27825493 27825858 + 54 NA promoter-TSS (NM_000982) promoter-TSS (NM_000982) -17 NM_000982 6144 Hs.381123 NM_000982 HPRD:04700 RPL21 HYPT12|L21 ribosomal protein L21 protein-coding 0.076712 0.587432 -50(AAGTCGCT,+,0.00),-49(AGTCGCTT,-,0.00) -46(CGCTTACG,+,0.00),72(CCTACGCG,-,0.00) 42(TCGGCCGG,-,0.00) 20(CCGCGGCCCCGC,-,0.00) 21(CGCGGCCCCGCC,-,0.00) 561_WT_peak_3932 chr19 58838252 58838544 + 54 NA promoter-TSS (NM_181846) promoter-TSS (NM_181846) 13 NM_181846 342945 Hs.388162 NM_181846 HPRD:01315 ZSCAN22 HKR2|ZNF50 zinc finger and SCAN domain containing 22 protein-coding 0.071918 0.662116 -3(CGGCGGGCGCGC,-,0.00) 43(GTCCGCCG,-,0.00) -100(ACCGCGCC,+,0.00) 561_WT_peak_875 chr10 8175147 8175446 + 54 NA Intergenic Intergenic 78629 NM_001002295 2625 Hs.524134 NM_002051 HPRD:00572 GATA3 HDR|HDRS GATA binding protein 3 protein-coding 0.020067 0.456667 -51(TCATCTCAGCCC,+,0.00) -83(CAAACCCG,+,0.00) 561_WT_peak_6675 chr7 56118877 56119174 + 54 NA promoter-TSS (NM_001762) promoter-TSS (NM_001762) 243 NM_004577 5723 Hs.512656 NM_004577 HPRD:01406 PSPH PSP|PSPHD phosphoserine phosphatase protein-coding 0.060606 0.570470 -16(CTTCGCTA,+,0.00) 561_WT_peak_2839 chr16 50186501 50186790 + 54 NA promoter-TSS (NM_001040285) promoter-TSS (NM_001040285) -184 NM_001040284 64282 Hs.514342 NM_022447 HPRD:16119 PAPD5 TRF4-2 PAP associated domain containing 5 protein-coding 0.069204 0.610345 98(GGGCCCGGGATC,+,0.00) -119(CCCCCACCCCGG,+,0.00) -95(AGGGCGGGGC,-,0.00) 89(GGGTTGCGAGGG,-,0.00) -109(GGCCAGGGCGCA,-,0.00) -110(CGGCCAGGGCGC,-,0.00) 561_WT_peak_3526 chr18 67612498 67612577 + 54 NA intron (NM_006566, intron 3 of 6) MIRc|SINE|MIR 11695 NM_006566 10666 Hs.660130 NM_006566 HPRD:09252 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding 0.012658 0.487500 561_WT_peak_7252 chr9 36258068 36258436 + 54 NA intron (NM_001128227, intron 1 of 11) CpG 244 NM_001190383 10020 Hs.5920 NM_005476 HPRD:04825 GNE DMRV|GLCNE|IBM2|NM|Uae1 glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase protein-coding 0.100543 0.737127 -11(CCGGGGAGGGGA,-,0.00),18(CGGGGGAGGCGG,-,0.00) 166(GAGCGCGAGCCT,+,0.00) 16(GCCGGGGG,+,0.00) 150(CGCCACGA,-,0.00) 60(GTCCCACG,-,0.00) -33(GGCGCGGT,-,0.00) -18(AAAGCGGCCG,-,0.00) 561_WT_peak_6004 chr5 158836892 158837062 + 54 NA Intergenic L1MB2|LINE|L1 56307 NR_027110 285627 Hs.552766 NR_027110 ENSG00000253298 LOC285627 - uncharacterized LOC285627 ncRNA 0.005882 0.374269 561_WT_peak_7171 chr8 141522301 141522494 + 54 NA intron (NR_040712, intron 1 of 2) CpG 316 NR_040712 54108 Hs.279704 NM_017444 HPRD:06275 CHRAC1 CHARC1|CHARC15|CHRAC-1|CHRAC-15|CHRAC15|YCL1 chromatin accessibility complex 1 protein-coding 0.088083 0.670103 -55(CGCGTGCG,+,0.00) -93(GCCGGGCG,+,0.00) -32(GTCCGAGG,-,0.00) -84(TTCACCCG,-,0.00),-63(TTTTCCCG,-,0.00) -50(GCGGTGCCAGCT,+,0.00) 561_WT_peak_6693 chr7 66385958 66386175 + 54 NA promoter-TSS (NM_017994) promoter-TSS (NM_017994) -137 NM_017994 55069 Hs.488478 NM_017994 HPRD:08541 TMEM248 C7orf42 transmembrane protein 248 protein-coding 0.124424 0.646789 -19(CTCCGCCGCC,-,0.00) -143(AGCCACAT,-,0.00) 24(CGTCGGAC,+,0.00),25(GTCGGACG,-,0.00) 14(GCCGCGCC,+,0.00) 561_WT_peak_7407 chr9 117665159 117665210 + 54 NA 3' UTR (NM_001244, exon 4 of 4) 3' UTR (NM_001244, exon 4 of 4) 27691 NM_001244 944 Hs.494901 NM_001244 TNFSF8 CD153|CD30L|CD30LG tumor necrosis factor (ligand) superfamily, member 8 protein-coding 0.019608 0.403846 561_WT_peak_5569 chr4 103789431 103789671 + 54 NA promoter-TSS (NM_001008388) promoter-TSS (NM_001008388) 499 NM_181893 7323 Hs.518773 NM_003340 HPRD:04269 UBE2D3 E2(17)KB3|UBC4/5|UBCH5C ubiquitin-conjugating enzyme E2D 3 protein-coding 0.041667 0.522822 -121(CTCGGCCTCC,-,0.00) -154(GGCCTCGA,-,0.00) -79(CGCCCGGC,-,0.00) -83(ACCGCGCC,+,0.00) -125(CCGCCTCG,-,0.00) 561_WT_peak_5123 chr3 52719330 52719520 + 54 NA promoter-TSS (NM_014366) promoter-TSS (NM_014366) 441 NM_018313 55193 Hs.189920 NM_018165 ENSG00000163939 PBRM1 BAF180|PB1 polybromo 1 protein-coding 0.057895 0.471204 -85(AAAGAGGCCC,-,0.00) 9(CCGCGACG,-,0.00) 561_WT_peak_6674 chr7 55601138 55601417 + 54 NA intron (NM_030796, intron 1 of 4) intron (NM_030796, intron 1 of 4) 4132 NM_001284284 81552 Hs.488307 NM_030796 HPRD:08526 VOPP1 ECOP|GASP vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding 0.010753 0.510714 9(CAGCTTCTTCAG,-,0.00) -75(GAAAGAGGAAGC,+,0.00) 561_WT_peak_5514 chr4 81046809 81047071 + 54 NA Intergenic Intergenic -52314 NM_001286780 118429 Hs.162963 NM_058172 HPRD:07452 ANTXR2 CMG-2|CMG2|HFS|ISH|JHF anthrax toxin receptor 2 protein-coding 0.011450 0.441065 -20(AAGCCTCT,+,0.00) 561_WT_peak_825 chr1 244624486 244624733 + 54 NA promoter-TSS (NM_173807) promoter-TSS (NM_173807) -64 NM_173807 257044 Hs.459534 NM_173807 HPRD:14561 C1orf101 - chromosome 1 open reading frame 101 protein-coding 0.121457 0.717742 61(GGCGGAGGCGGA,-,0.00) -118(AGGCCTCT,+,0.00) -4(CCGCCCGCCGGG,+,0.00) -92(CGCGCACG,+,0.00),-90(CGCACGCG,-,0.00),-86(CGCGCACG,+,0.00),-84(CGCACGCG,-,0.00) -50(GCCCGGCCCG,+,0.00) -98(TAGCGGCG,-,0.00) 6(GGCCGACG,-,0.00),13(GTCCCACG,-,0.00) 50(CGAGGCGG,+,0.00) 561_WT_peak_6815 chr7 107383714 107383897 + 54 NA promoter-TSS (NR_024199) promoter-TSS (NR_024199) -337 NM_001284291 79872 Hs.592271 NM_024814 HPRD:07590 CBLL1 HAKAI|RNF188 Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase protein-coding 0.065574 0.570652 -87(GGCCCTGGCGCC,-,0.00) -119(GCTGCGCCGC,+,0.00),-119(GCTGCGCCGC,-,0.00) 561_WT_peak_5953 chr5 138941475 138941637 + 54 NA intron (NM_003339, intron 1 of 6) CpG 805 NM_181838 7322 Hs.108332 NM_003339 HPRD:04268 UBE2D2 E2(17)KB2|PUBC1|UBC4|UBC4/5|UBCH4|UBCH5B ubiquitin-conjugating enzyme E2D 2 protein-coding 0.111111 0.748466 561_WT_peak_6817 chr7 107531730 107531969 + 54 NA intron (NM_001289752, intron 1 of 12) CpG 297 NM_000108 1738 Hs.131711 NM_000108 HPRD:02006 DLD DLDD|DLDH|E3|GCSL|LAD|PHE3 dihydrolipoamide dehydrogenase protein-coding 0.083682 0.716667 -69(GGCGGAGGCGGG,-,0.00) -95(GGTACGCG,-,0.00) -13(GCCCGGCCCT,+,0.00) -40(CCCTGGCCCCGC,-,0.00) -155(GGGCCGAGTA,+,0.00),-14(AGCCCGGCCC,-,0.00) -152(CCGAGTAG,-,0.00) 561_WT_peak_6709 chr7 72992678 72992902 + 54 NA exon (NM_012453, exon 1 of 7) exon (NM_012453, exon 1 of 7) 223 NM_012453 26608 Hs.647044 NM_012453 HPRD:09319 TBL2 WBSCR13|WS-betaTRP transducin (beta)-like 2 protein-coding 0.107143 0.737778 -151(CGAGGAGGCCGG,-,0.00) -34(CGTCGCCA,+,0.00) -161(GGTCGGAC,+,0.00) -7(CAACACCG,+,0.00) -109(GACCCGGCCC,-,0.00) -39(GCCGCCGTCGCC,+,0.00) -93(CAGGCGGGCCGG,-,0.00),-90(GCGGGCCGGCCG,+,0.00) 561_WT_peak_3139 chr17 35306004 35306182 + 53 NA promoter-TSS (NM_012138) promoter-TSS (NM_012138) -82 NM_012138 26574 Hs.195740 NM_012138 HPRD:12236 AATF BFR2|CHE-1|CHE1|DED apoptosis antagonizing transcription factor protein-coding 0.140449 0.631285 -28(CGCACGCG,-,0.00),-24(CGCGCACG,+,0.00),-22(CGCACGCG,-,0.00) -84(CGACAGAAGCGG,+,0.00),-47(CCGCCCCTTCCC,-,0.00) -38(CCCGCGCA,+,0.00) -116(CACTGGCCGCGC,-,0.00) 561_WT_peak_52 chr1 10003221 10003411 + 53 NA promoter-TSS (NM_032368) promoter-TSS (NM_032368) -170 NM_001297779 64802 Hs.633762 NM_022787 HPRD:16369 NMNAT1 LCA9|NMNAT|PNAT1 nicotinamide nucleotide adenylyltransferase 1 protein-coding 0.063158 0.670157 -92(CCTTCCGGGCCT,-,0.00) -159(GGCGGCCGGG,+,0.00) -164(CCCGCGGC,-,0.00) -56(CCTTAGGCCCCC,-,0.00) -158(GCGGCCGGGCTC,+,0.00) 561_WT_peak_511 chr1 150254360 150254786 + 53 NA promoter-TSS (NM_001300838) promoter-TSS (NM_001300838) -370 NM_144697 148523 Hs.54680 NM_144697 HPRD:14081 CIART C1orf51|CHRONO|GM129 circadian associated repressor of transcription protein-coding 0.058685 0.573770 150(CCATCCTCCTCC,+,0.00) -142(CTGGGCCGCC,-,0.00),-139(GGCCGCCGAG,+,0.00) 189(AGCCGCAT,-,0.00) -146(AGGGCTGGGC,-,0.00) 16(GTCCCACG,-,0.00),23(GTCCGCCG,-,0.00) 65(ACCGCGCA,+,0.00) 107(GGCTCCGCCC,-,0.00) -1(CCGAGACG,-,0.00) 561_WT_peak_1812 chr12 96252809 96253161 + 53 NA intron (NM_003095, intron 1 of 3) CpG 276 NM_003095 6636 Hs.105465 NM_003095 SNRPF SMF|Sm-F|snRNP-F small nuclear ribonucleoprotein polypeptide F protein-coding 0.068182 0.566572 103(GAATCCGGGCCT,-,0.00) -99(CGGGAGAAGCGG,+,0.00) 144(GGGGTAAA,+,0.00) -9(GCCGCGCA,+,0.00) -58(GCGGGGCCTGCT,+,0.00) 561_WT_peak_2846 chr16 53552664 53552888 + 53 NA Intergenic Intergenic -15606 NM_022476 64400 Hs.380897 NM_022476 HPRD:07467 AKTIP FT1|FTS AKT interacting protein protein-coding 0.022321 0.480000 -17(GGGAACGGAAGG,+,0.00) 561_WT_peak_5614 chr4 148864286 148864424 + 53 NA intron (NM_024605, intron 14 of 22) intron (NM_024605, intron 14 of 22) 160609 NR_039962 100616246 NR_039962 MIR4799 - microRNA 4799 ncRNA 0.000000 0.381295 561_WT_peak_279 chr1 67637748 67637942 + 53 NA intron (NM_144701, intron 3 of 10) intron (NM_144701, intron 3 of 10) 5676 NM_144701 149233 Hs.677426 NM_144701 HPRD:16249 IL23R - interleukin 23 receptor protein-coding 0.000000 0.374359 -33(GGGTTTTG,-,0.00) 561_WT_peak_2303 chr14 77423009 77423210 + 53 NA Intergenic Intergenic 71933 NM_024496 64207 Hs.179260 NM_024496 HPRD:10713 IRF2BPL C14orf4|EAP1 interferon regulatory factor 2 binding protein-like protein-coding 0.089552 0.673267 -8(AGGCCCGGAAAT,+,0.00) -158(CTCGCCCGCC,-,0.00) -146(GGGCCGGGGCTG,-,0.00),-140(GGGCTGGCGCTG,-,0.00) -125(CGAACGCG,-,0.00) -151(GCCGCGGG,+,0.00) -130(TGGCACGA,-,0.00) 561_WT_peak_1527 chr11 128346761 128346944 + 53 NA intron (NM_001143820, intron 8 of 9) intron (NM_001143820, intron 8 of 9) 45353 NM_005238 2113 Hs.369438 NM_005238 HPRD:01260 ETS1 ETS-1|EWSR2|p54 v-ets avian erythroblastosis virus E26 oncogene homolog 1 protein-coding 0.016393 0.434783 561_WT_peak_3485 chr18 33647234 33647589 + 53 NA promoter-TSS (NM_018170) promoter-TSS (NM_018170) -38 NM_018170 55197 Hs.464912 NM_018170 HPRD:10134 RPRD1A HsT3101|P15RS regulation of nuclear pre-mRNA domain containing 1A protein-coding 0.095775 0.668539 81(CACGGCCGCC,-,0.00) 26(TCGCCGCC,+,0.00) 163(CCGCCCCTCCCG,-,0.00) 49(CCCCCTCACCCC,+,0.00) -7(GTCCCACG,-,0.00) 99(CAAGACCG,+,0.00) 155(CCCACGCCCCGC,-,0.00) 561_WT_peak_2401 chr15 22448278 22448575 + 53 NA Intergenic Intergenic 34964 NR_028067 390539 Hs.666555 NR_028067 ENSG00000259435 OR4N3P OR15-2 olfactory receptor, family 4, subfamily N, member 3 pseudogene pseudo 0.023569 0.530201 561_WT_peak_1047 chr10 74927634 74927897 + 53 NA promoter-TSS (NM_007265) promoter-TSS (NM_007265) 88 NM_001135752 11319 Hs.631822 NM_007265 HPRD:11032 ECD GCR2|HSGT1 ecdysoneless homolog (Drosophila) protein-coding 0.091255 0.628788 -128(AGCCGCCT,-,0.00) 83(CCGCCCCCGCGG,+,0.00) -57(CCGACGCC,+,0.00) 88(CCCGCGGC,-,0.00) -3(CCCACTCAGTCC,+,0.00) 561_WT_peak_3199 chr17 42403673 42404025 + 53 NA Intergenic AluSp|SINE|Alu -1632 NM_001143780 51629 Hs.744880 NM_016016 HPRD:13040 SLC25A39 CGI69 solute carrier family 25, member 39 protein-coding 0.062500 0.558074 -16(CCCGGAAGGCGG,-,0.00),164(CTGCCTCCCCGG,+,0.00) -84(GCCGGGCG,+,0.00) -111(CGTCTCTA,+,0.00) 176(GAGACAGGAAGG,+,0.00) 561_WT_peak_7249 chr9 35646735 35647017 + 53 NA Intergenic CpG 4071 NM_014450 27240 Hs.88012 NM_014450 HPRD:05394 SIT1 SIT|SIT-R signaling threshold regulating transmembrane adaptor 1 protein-coding 0.117021 0.720848 -56(AGCGTCGA,-,0.00),66(GGCGGCGA,-,0.00) -30(GCCGCGGG,+,0.00) -112(TAGCGGCG,-,0.00) 12(AACTCCGCCC,-,0.00) 60(GGCGAAGGCGGC,-,0.00) -110(GCGGCGGGGC,+,0.00),30(GCGGCGGCGC,+,0.00) -26(CGGGCCAGGCTG,+,0.00) 561_WT_peak_7351 chr9 95640165 95640452 + 53 NA promoter-TSS (NM_031486) promoter-TSS (NM_031486) 12 NM_001261460 83744 Hs.668378 NM_031486 HPRD:18346 ZNF484 BA526D8.4 zinc finger protein 484 protein-coding 0.045296 0.576389 63(AGCGGCTT,-,0.00) -75(ACTTCCTTTTTC,-,0.00) 561_WT_peak_4791 chr21 38362022 38362207 + 53 NA intron (NM_000411, intron 1 of 11) CpG 431 NM_000411 3141 Hs.371350 NM_000411 HPRD:08360 HLCS HCS holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) protein-coding 0.124324 0.725806 -102(CGGGGCACGCGG,-,0.00) -8(CCGAGCCAGCCC,+,0.00) -30(CGCGTGCG,+,0.00) -144(TAGCGGCG,-,0.00) -103(GCGGGGCACGCG,+,0.00) -40(CGCGTCGCCGCG,+,0.00),-40(CGCGTCGCCGCG,-,0.00) -11(GGGCCGAGCC,+,0.00) -41(CCGCGTCG,-,0.00) -94(GCGGCCAGGGGC,+,0.00) -39(GCGTCGCCGC,-,0.00) -16(CAGCCGGGCCGA,-,0.00),-6(GAGCCAGCCCGG,-,0.00) 561_WT_peak_4968 chr22 49779873 49780087 + 53 NA Intergenic Intergenic 271210 NR_110522 348645 Hs.133159 NM_198851 HPRD:14180 C22orf34 - chromosome 22 open reading frame 34 protein-coding 0.009346 0.376744 561_WT_peak_7162 chr8 134315665 134315902 + 53 NA Intergenic MLT1A0|LTR|ERVL-MaLR -6236 NM_006096 10397 Hs.372914 NM_006096 HPRD:05586 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding 0.004219 0.512605 561_WT_peak_6650 chr7 43623070 43623324 + 53 NA intron (NM_004760, intron 1 of 6) CpG 505 NM_004760 9263 Hs.709489 NM_004760 HPRD:05288 STK17A DRAK1 serine/threonine kinase 17a protein-coding 0.145669 0.694118 -23(GGCAGCCGAG,+,0.00) -129(GGCGCCGA,-,0.00),-105(GGCGGCGA,-,0.00) -151(CGGACGCG,-,0.00) -42(GGGTGCCGACGG,+,0.00) 10(GCCGCGCC,+,0.00) -117(TGCCGGCGCCGC,-,0.00) 50(CCCGGAGGCGCG,+,0.00) -18(CCGAGTCG,-,0.00) -104(GCGGCGAGGC,+,0.00) -104(GCGGCGAGGCTG,+,0.00) 561_WT_peak_2474 chr15 49338666 49339009 + 53 NA promoter-TSS (NM_014701) promoter-TSS (NM_014701) -77 NM_001193489 9728 Hs.9997 NM_014701 HPRD:17181 SECISBP2L SBP2L|SLAN SECIS binding protein 2-like protein-coding 0.049563 0.630814 -42(GGAGGAGGCAGA,-,0.00) -37(AGGCAGAGAGGG,-,0.00) 23(CCGGCCTGGCCT,+,0.00) 561_WT_peak_6771 chr7 99724390 99724613 + 53 NA 5' UTR (NM_203397, exon 1 of 2) 5' UTR (NM_203397, exon 1 of 2) 181 NM_203397 255374 Hs.632319 NM_203397 HPRD:18584 MBLAC1 - metallo-beta-lactamase domain containing 1 protein-coding 0.071749 0.629464 26(TTCGGCCGCC,-,0.00) 15(CGCGGCGCCGCT,+,0.00),15(CGCGGCGCCGCT,-,0.00) -40(CAGCCAGGCAGC,-,0.00) 561_WT_peak_4716 chr20 61371584 61371929 + 53 NA intron (NM_002531, intron 1 of 3) intron (NM_002531, intron 1 of 3) 31567 NM_002531 4923 Hs.590869 NM_002531 HPRD:01218 NTSR1 NTR neurotensin receptor 1 (high affinity) protein-coding 0.052174 0.572254 134(CCGTGCAGGCGG,-,0.00) 158(TTGTGCCG,+,0.00) 561_WT_peak_6954 chr8 28258727 28259012 + 53 NA Intergenic Intergenic -14892 NM_018660 55893 Hs.435535 NM_018660 HPRD:11711 ZNF395 HDBP-2|HDBP2|HDRF-2|PBF|PRF-1|PRF1|Si-1-8-14 zinc finger protein 395 protein-coding 0.094737 0.597902 -31(AACCACTT,-,0.00) -80(CGGACGCG,-,0.00) 561_WT_peak_144 chr1 28832525 28832695 + 53 NA intron (NM_001048199, intron 1 of 11) intron (NM_001048199, intron 1 of 11) 155 NR_036473 8420 Hs.469723 NR_002909 ENSG00000242125 SNHG3 NCRNA00014|RNU17C|RNU17D|U17HG|U17HG-A|U17HG-AB small nucleolar RNA host gene 3 (non-protein coding) ncRNA 0.035294 0.456140 561_WT_peak_5215 chr3 115511177 115511338 + 53 NA Intergenic Intergenic 169106 NM_001130064 2596 Hs.134974 NM_002045 HPRD:01198 GAP43 B-50|PP46 growth associated protein 43 protein-coding 0.006211 0.450617 561_WT_peak_2363 chr14 100680655 100680862 + 53 NA Intergenic CpG -24344 NM_003403 7528 Hs.388927 NM_003403 YY1 DELTA|INO80S|NF-E1|UCRBP|YIN-YANG-1 YY1 transcription factor protein-coding 0.120773 0.730769 -158(AAGCCGCT,+,0.00),-157(AGCCGCTT,-,0.00) 2(TCGGGCGG,-,0.00) -113(CGGGCCGGGC,-,0.00) -74(CCCCCGGC,-,0.00) -114(TCGGGCCG,+,0.00) -160(CAAAGCCG,+,0.00) -72(CCCGGCTCCGTG,-,0.00) 561_WT_peak_357 chr1 109633083 109633346 + 53 NA promoter-TSS (NM_020141) promoter-TSS (NM_020141) -189 NM_020141 56900 Hs.82933 NM_020141 TMEM167B C1orf119 transmembrane protein 167B protein-coding 0.076046 0.537879 -119(AGCCGCCA,-,0.00),70(AATCGGCT,+,0.00) -57(GCGGGCCAGCCC,+,0.00),-51(CAGCCCCAGCCC,+,0.00) -117(CCGCCACG,-,0.00) -118(GCCGCCACGGCG,+,0.00) 561_WT_peak_6763 chr7 99069798 99070162 + 53 NA promoter-TSS (NM_213603) promoter-TSS (NM_213603) -535 NM_001013258 285989 Hs.440384 NM_213603 HPRD:14161 ZNF789 - zinc finger protein 789 protein-coding 0.057692 0.572603 47(CTCGGCCTCC,-,0.00) -121(CCGCCTCCCGGG,+,0.00) 89(CGCCCGGC,-,0.00) -20(TAGAGACG,-,0.00) -124(CCTCCGCCTCCC,-,0.00) 85(ACCGCGCC,+,0.00) -82(CCGAGTAG,-,0.00),43(CCGCCTCG,-,0.00) -65(CAGGCAGGCACC,-,0.00) 561_WT_peak_3633 chr19 12750893 12751082 + 53 NA Intergenic CpG 26604 NM_001173498 4125 Hs.356769 NM_000528 HPRD:02007 MAN2B1 LAMAN|MANB mannosidase, alpha, class 2B, member 1 protein-coding 0.095238 0.626316 -39(CCGAGAAG,-,0.00) 561_WT_peak_4334 chr2 157198441 157198825 + 53 NA Intergenic CpG -9346 NM_006186 4929 Hs.563344 NM_006186 HPRD:03493 NR4A2 HZF-3|NOT|NURR1|RNR1|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding 0.072917 0.651948 202(AGAGGCCT,-,0.00) -48(CGGCGCTCCCGG,+,0.00),8(CCCGCTCCCCGG,+,0.00) -42(TCCCGGCCCC,+,0.00) 190(GCCGGGGG,+,0.00) -107(CCGCTCCTCCCG,-,0.00) -133(GTCCGGCG,-,0.00) 85(CGGTTTTT,-,0.00) 45(TGGGCGGC,-,0.00) -15(CGCTGGGCGCGC,-,0.00) 82(GGGCGGTTTT,+,0.00) 561_WT_peak_4047 chr2 43447029 43447483 + 53 NA Intergenic Intergenic 6489 NM_006887 678 Hs.503093 NM_006887 HPRD:18319 ZFP36L2 BRF2|ERF-2|ERF2|RNF162C|TIS11D ZFP36 ring finger protein-like 2 protein-coding 0.046256 0.586813 193(GGCGGCCAAG,+,0.00) 176(TAGTGCCG,+,0.00) 227(CGTCGGGC,+,0.00) 40(CAAAACTG,+,0.00) 180(GCCGGGCCAGGC,+,0.00) 182(CGGGCCAGGCTG,+,0.00) 561_WT_peak_3813 chr19 46390075 46390244 + 53 NA promoter-TSS (NM_015649) promoter-TSS (NM_015649) -783 NM_015649 26145 Hs.515477 NM_015649 HPRD:17159 IRF2BP1 - interferon regulatory factor 2 binding protein 1 protein-coding 0.071006 0.629412 -29(CCCCCGCC,-,0.00) -98(TAGTGACG,-,0.00) -107(GGTCGGAC,+,0.00) 561_WT_peak_2664 chr16 2918158 2918369 + 53 NA Intergenic CpG -10092 NM_022119 64063 Hs.459709 NM_022119 HPRD:08336 PRSS22 BSSP-4|hBSSP-4 protease, serine, 22 protein-coding 0.075829 0.636792 -87(CCGGCCGA,+,0.00) 561_WT_peak_953 chr10 35484876 35485106 + 53 NA exon (NM_182724, exon 1 of 3) exon (NM_182724, exon 1 of 3) 161 NR_051972 1390 Hs.200250 NM_001881 HPRD:00444 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding 0.021739 0.463203 -97(AAGTGGTT,+,0.00) 561_WT_peak_7380 chr9 107510285 107510578 + 53 NA intron (NM_015469, intron 1 of 5) CpG 462 NM_015469 25934 Hs.530275 NM_015469 HPRD:16399 NIPSNAP3A NIPSNAP4|TASSC nipsnap homolog 3A (C. elegans) protein-coding 0.078498 0.642857 -130(GGAGGAGGCCGC,-,0.00) -125(AGGCCGCT,+,0.00) -146(CCCGGAACGCGC,-,0.00) 64(GCCGCGGG,+,0.00) -8(CGTTTTTG,-,0.00) 58(TGTGGAGCCGCG,+,0.00) -28(TCCCATGGCGCC,-,0.00) 56(GCTGTGGAGC,+,0.00) 561_WT_peak_6362 chr6 64283023 64283457 + 53 NA intron (NM_003463, intron 1 of 5) CpG 1323 NM_003463 7803 Hs.227777 NM_003463 HPRD:03349 PTP4A1 HH72|PRL-1|PRL1|PTP(CAAX1)|PTPCAAX1 protein tyrosine phosphatase type IVA, member 1 protein-coding 0.135945 0.740230 -39(GGAGCCGGATAC,+,0.00) -28(CGGGGAGGGCGC,-,0.00) 129(TCGACGGC,+,0.00),165(TCGGCGCC,+,0.00) 255(CGCGTGCG,+,0.00),257(CGTGCGCG,-,0.00) -115(TCGGCCGG,-,0.00) 191(CGGCGCGA,-,0.00) 212(GCGCGGAGAGGG,-,0.00) -21(GGCGCGGC,-,0.00),187(GGCGCGGC,-,0.00),259(TGCGCGGG,-,0.00) -148(GGCAGGCTCCGC,-,0.00) -127(GGGCCTCTTT,+,0.00) 70(CTTCTCGG,+,0.00) -154(GGGCATGGCAGG,-,0.00) -143(GCTCCGCGGC,-,0.00),-44(ACTGCGGAGC,+,0.00) 34(CAGCCAGGCACG,-,0.00) 561_WT_peak_2085 chr13 99739653 99739843 + 53 NA non-coding (NR_047482, exon 1 of 1) non-coding (NR_047482, exon 1 of 1) 771 NR_047482 100861541 Hs.344872 NR_047482 DOCK9-AS2 - DOCK9 antisense RNA 2 (head to head) ncRNA 0.105263 0.696335 16(AACCGCTT,-,0.00) -26(TAGCGACA,-,0.00) -107(CGCCGGAC,+,0.00) -131(TTTAGCCG,-,0.00) -117(CGCCCCTCCGCG,-,0.00) -138(GGGCCGATTT,+,0.00) 561_WT_peak_4275 chr2 118572127 118572503 + 53 NA promoter-TSS (NM_006773) promoter-TSS (NM_006773) 60 NM_006773 8886 Hs.744922 NM_006773 HPRD:05894 DDX18 MrDb DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 protein-coding 0.095745 0.586207 199(CGCGTTCG,+,0.00) 204(TCGGGCGG,-,0.00) -80(TCGTTCCG,+,0.00) -31(GCTGCGCA,+,0.00) 561_WT_peak_4288 chr2 128284262 128284537 + 53 NA promoter-TSS (NM_017969) promoter-TSS (NM_017969) -312 NM_017969 55677 Hs.469879 NM_017969 HPRD:07639 IWS1 - IWS1 homolog (S. cerevisiae) protein-coding 0.065455 0.528986 561_WT_peak_4807 chr21 43429961 43430413 + 53 NA intron (NR_119384, intron 1 of 1) CpG 309 NM_001098402 49854 Hs.434947 NM_020727 HPRD:10328 ZBTB21 ZNF295 zinc finger and BTB domain containing 21 protein-coding 0.099558 0.657837 256(GACGCCGGGCCC,-,0.00) 22(AATCGGCT,+,0.00) 167(GCGGGGAGGCTG,-,0.00) 70(CGCGCACG,+,0.00),72(CGCACGCG,-,0.00) 4(TGCGCAGT,-,0.00),68(CCCGCGCA,+,0.00) 155(AGGCCGCGTT,+,0.00),262(GGGCCCCTTT,+,0.00) 561_WT_peak_4841 chr22 20861776 20861946 + 53 NA promoter-TSS (NM_001003891) promoter-TSS (NM_001003891) 32 NM_001293236 51586 Hs.517421 NM_015889 HPRD:12117 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding 0.105882 0.678363 -61(GCTTCCGGGTTT,-,0.00) -17(GGCGGCCAAG,+,0.00) -56(CGGGTTTG,-,0.00) -16(GCGGCCAAGC,+,0.00) 561_WT_peak_3902 chr19 56165016 56165187 + 53 NA promoter-TSS (NM_007279) promoter-TSS (NM_007279) -315 NM_007279 11338 Hs.528007 NM_007279 HPRD:01872 U2AF2 U2AF65 U2 small nuclear RNA auxiliary factor 2 protein-coding 0.081871 0.587209 -87(CGGCGCGA,-,0.00) -58(TAGCGAGG,-,0.00) -88(GCGGCGCGAGAG,+,0.00) -4(GCCGCCAGGGGG,+,0.00) 561_WT_peak_820 chr1 243419165 243419486 + 53 NA promoter-TSS (NM_014812) promoter-TSS (NM_014812) 18 NM_006642 10806 Hs.591530 NM_006642 HPRD:10215 SDCCAG8 BBS16|CCCAP|CCCAP SLSN7|NPHP10|NY-CO-8|SLSN7|hCCCAP serologically defined colon cancer antigen 8 protein-coding 0.056075 0.608696 50(AGGCGGGCGCTC,-,0.00) 39(CGGCAGGA,-,0.00) -156(CCAAACCG,+,0.00) 561_WT_peak_5031 chr3 18720859 18721047 + 53 NA Intergenic Intergenic 234224 NR_125803 101927777 Hs.543235 NR_125803 SATB1-AS1 - SATB1 antisense RNA 1 ncRNA 0.010638 0.428571 561_WT_peak_1448 chr11 88148139 88148411 + 53 NA Intergenic Intergenic -77334 NM_001814 1075 Hs.128065 NM_001814 HPRD:03841 CTSC CPPI|DPP-I|DPP1|DPPI|HMS|JP|JPD|PALS|PDON1|PLS cathepsin C protein-coding 0.000000 0.450549 561_WT_peak_5821 chr5 76028944 76029114 + 53 NA exon (NM_001992, exon 2 of 2) exon (NM_001992, exon 2 of 2) 17161 NM_001992 2149 Hs.482562 NM_001992 HPRD:01763 F2R CF2R|HTR|PAR-1|PAR1|TR coagulation factor II (thrombin) receptor protein-coding 0.035294 0.520468 -83(CTTCGGAC,+,0.00) 561_WT_peak_497 chr1 149824160 149824643 + 53 NA exon (NM_021059, exon 1 of 1).2 exon (NM_021059, exon 1 of 1).2 220 NM_001005464 333932 Hs.647745 NM_001005464 HIST2H3A H3/n|H3/o histone cluster 2, H3a protein-coding 0.105590 0.663223 14(GCTACCGGCCCG,-,0.00),19(CGGCCCGGCACC,+,0.00) 230(TCCACGCC,+,0.00) 105(GGTACGCG,-,0.00) 49(CGGCGCTA,+,0.00) -38(AAGGCGGCCC,-,0.00) -42(CACCAAGGCGGC,-,0.00) 561_WT_peak_5533 chr4 84376679 84377008 + 53 NA promoter-TSS (NM_016067) promoter-TSS (NM_016067) 193 NM_001297756 113510 Hs.480101 NM_133636 HPRD:08422 HELQ HEL308 helicase, POLQ-like protein-coding 0.072948 0.600000 142(CGGACCGGAAGC,+,0.00) -95(CTCGGCCGCG,-,0.00) 48(AGACGCTA,-,0.00) -104(GGGCACGA,-,0.00) -162(CGGTTTTC,-,0.00) 561_WT_peak_1916 chr12 125259035 125259510 + 53 NA Intergenic L1ME1|LINE|L1 89247 NM_005505 949 Hs.731377 NM_005505 HPRD:03024 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B, member 1 protein-coding 0.025263 0.464286 170(CGTACGCC,-,0.00) 561_WT_peak_3047 chr17 15466433 15466793 + 53 NA intron (NR_037924, intron 1 of 5) CpG 332 NR_037924 100533496 Hs.164595 NM_001204478 ENSG00000259024 TVP23C-CDRT4 FAM18B2-CDRT4 TVP23C-CDRT4 readthrough protein-coding 0.075000 0.686981 29(CCCGGCCGCC,-,0.00) -162(AGGCCGCT,+,0.00),-27(AGCGGCCT,-,0.00),118(AGCCGCCA,-,0.00) 69(CGGGGGACGCGG,-,0.00) 126(CCCTCCCAGCGC,+,0.00),137(CGCCCTCAGCCC,+,0.00) 87(GTCCCACG,-,0.00) 160(CAACATGGCGGC,-,0.00) 561_WT_peak_5949 chr5 138775029 138775361 + 53 NA promoter-TSS (NM_152686) promoter-TSS (NM_152686) 19 NM_152686 202052 Hs.483537 NM_152686 HPRD:07130 DNAJC18 - DnaJ (Hsp40) homolog, subfamily C, member 18 protein-coding 0.075301 0.651652 -68(TCGCCGCC,+,0.00) -39(GTCCGCCG,-,0.00) 561_WT_peak_4713 chr20 60876941 60877179 + 53 NA promoter-TSS (NM_001281438) promoter-TSS (NM_001281438) -892 NM_175573 11047 Hs.90107 NM_007002 HPRD:06440 ADRM1 ARM-1|ARM1|GP110 adhesion regulating molecule 1 protein-coding 0.067227 0.581590 -153(CTCGGCCTCC,-,0.00) -83(GGCGTCGC,-,0.00) -38(CGGCTGGGGCGC,-,0.00) -92(CCCCCGCC,-,0.00) -81(CGTCGCTG,+,0.00) 57(TTTACCCT,-,0.00) -115(ACCGCGCC,+,0.00) -157(CCGCCTCG,-,0.00) 561_WT_peak_6538 chr6 159239870 159240056 + 53 NA promoter-TSS (NM_003379) promoter-TSS (NM_003379) 493 NM_001111077 7430 Hs.487027 NM_003379 HPRD:00475 EZR CVIL|CVL|HEL-S-105|VIL2 ezrin protein-coding 0.091398 0.679144 -154(GGCGGGGG,+,0.00),-14(CCCGCGGC,-,0.00) -100(GTCCGCCG,-,0.00) 0(CACAACCG,+,0.00) -16(GCCCCGCGGC,-,0.00) 561_WT_peak_7332 chr9 91933400 91934029 + 53 NA promoter-TSS (NM_001282690) promoter-TSS (NM_001282690) -52 NM_001282690 79048 Hs.59804 NM_024077 HPRD:07408 SECISBP2 SBP2 SECIS binding protein 2 protein-coding 0.112878 0.649206 -96(GCGGCCTCCTCC,+,0.00) -15(CTCGGCAGCC,-,0.00) -147(AAACGCTT,-,0.00),151(AGCGGCTA,-,0.00) 89(GCGCCCTACCGG,+,0.00) -70(GGCGTCGG,-,0.00) 139(GGGGTGGCGGTC,-,0.00) 26(TCGGCCGG,-,0.00),61(TGGGTCGG,-,0.00) -58(GCCGCGGG,+,0.00),29(GCCGGGCG,+,0.00),248(GGCGGGGG,+,0.00) 79(CGGCACGG,-,0.00) 176(TAGCGCCG,-,0.00),434(CGTCACTA,+,0.00) -68(CGTCGGAG,+,0.00),-31(GGCCGACG,-,0.00) 161(GACCCCGCCC,-,0.00) 121(CCGCCTCG,-,0.00) -76(CGGCATGGCGTC,-,0.00) -82(GCCTCGCGGC,-,0.00) 561_WT_peak_42 chr1 8242483 8242755 + 53 NA Intergenic Intergenic -135526 NM_001080397 50651 Hs.463036 NM_001080397 ENSG00000162426 SLC45A1 DNB5 solute carrier family 45, member 1 protein-coding 0.014706 0.373626 561_WT_peak_2350 chr14 96968498 96968689 + 53 NA promoter-TSS (NM_032632) promoter-TSS (NM_032632) 70 NR_122121 730202 Hs.647565 NR_122121 LOC730202 - uncharacterized LOC730202 ncRNA 0.104712 0.703125 -147(CCGCCCGA,+,0.00) -3(CGGCGGAC,+,0.00) -8(CTTCGCGG,+,0.00) -9(GCTTCGCGGC,-,0.00) -122(GGGGCCTCCCTG,+,0.00) 561_WT_peak_6810 chr7 106301344 106301547 + 53 NA 5' UTR (NM_175884, exon 1 of 1) 5' UTR (NM_175884, exon 1 of 1) 189 NM_175884 168455 Hs.29692 NM_175884 HPRD:08202 CCDC71L C7orf74 coiled-coil domain containing 71-like protein-coding 0.142857 0.745098 -49(CTCCGCCGCC,-,0.00) -162(AGGCCGCT,+,0.00) 0(CCTGCTGCCCGG,+,0.00) 22(CGGCCGGCGCCC,-,0.00) -20(CGGAGGACGCGG,+,0.00) -101(CGTTGGCTCCGC,-,0.00) -96(GCTCCGCGGC,-,0.00) 561_WT_peak_5518 chr4 83295352 83295827 + 53 NA promoter-TSS (NM_031370) promoter-TSS (NM_031370) -440 NM_002138 3184 Hs.480073 NM_002138 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) protein-coding 0.088421 0.657563 -129(TAGCGGCT,+,0.00),-128(AGCGGCTA,-,0.00) 218(TCGCCGCC,+,0.00) 157(GAGCGCCAGGCG,+,0.00) -101(CCCCCGCC,-,0.00) 9(TCGTGCCC,+,0.00) -47(TAGCGGCG,-,0.00) 265(GGGCCGATAGGG,-,0.00) 166(GCGCCGCAGC,-,0.00) 561_WT_peak_7147 chr8 126954337 126954587 + 53 NA non-coding (NR_038446, exon 2 of 2) non-coding (NR_038446, exon 2 of 2) 8979 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA 0.008000 0.434263 -24(CAAAACCT,+,0.00) -137(CCTTCCTGTTTC,-,0.00) 561_WT_peak_1035 chr10 71078196 71078381 + 53 NA promoter-TSS (NM_000188) promoter-TSS (NM_000188) -315 NM_000188 3098 Hs.370365 NM_000188 HPRD:00809 HK1 HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1 hexokinase 1 protein-coding 0.129730 0.747312 -128(GCCGGGCG,+,0.00) -141(TCGTCCCG,+,0.00) -43(GCATCGGCTCCC,-,0.00) -7(GCGGGGTCGGGG,+,0.00) -134(GGCGGAGCCGGG,+,0.00) -62(CCGCCACG,-,0.00) -72(GGGCACGGCGCC,-,0.00) -105(GCCTCGCACC,-,0.00) 561_WT_peak_4382 chr2 179896631 179896815 + 53 NA intron (NM_173648, intron 2 of 23) intron (NM_173648, intron 2 of 23) 18063 NM_173648 285025 Hs.324341 NM_173648 HPRD:08257 CCDC141 CAMDI coiled-coil domain containing 141 protein-coding 0.000000 0.372973 561_WT_peak_6269 chr6 30737139 30737309 + 53 NA Intergenic Intergenic -24897 NM_003897 8870 Hs.76095 NM_003897 HPRD:04295 IER3 DIF-2|DIF2|GLY96|IEX-1|IEX-1L|IEX1|PRG1 immediate early response 3 protein-coding 0.017647 0.497076 -34(TCGTGCCT,+,0.00) 561_WT_peak_4238 chr2 102323304 102323515 + 53 NA intron (NM_145686, intron 2 of 30) HAL1|LINE|L1 8871 NM_145687 9448 Hs.701013 NM_004834 HPRD:05235 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding 0.004739 0.424528 561_WT_peak_3576 chr19 3178749 3178951 + 53 NA exon (NM_003775, exon 1 of 1) exon (NM_003775, exon 1 of 1) 114 NM_003775 8698 Hs.662006 NM_003775 HPRD:04779 S1PR4 EDG6|LPC1|S1P4|SLP4 sphingosine-1-phosphate receptor 4 protein-coding 0.099010 0.763547 0(GGAGGATGGCGG,-,0.00) -17(GCCGGGCG,+,0.00) -29(TCGGGCCG,+,0.00) -154(CGTCGGGC,+,0.00) -7(GGGGGCCGGAGG,+,0.00) 8(GCGGCCTGGGGG,+,0.00) 561_WT_peak_1875 chr12 120449728 120449953 + 53 NA intron (NM_207311, intron 2 of 8) intron (NM_207311, intron 2 of 8) 22192 NM_207311 92558 Hs.369763 NM_207311 HPRD:14292 CCDC64 BICDR-1|H_267D11.1 coiled-coil domain containing 64 protein-coding 0.035556 0.429204 -93(CGTATGCG,-,0.00) 37(GGGCGGCTTC,+,0.00) 561_WT_peak_512 chr1 150266007 150266168 + 53 NA promoter-TSS (NM_031901) promoter-TSS (NM_031901) -175 NM_031901 54460 Hs.405880 NM_018997 HPRD:14784 MRPS21 MRP-S21|RPMS21 mitochondrial ribosomal protein S21 protein-coding 0.037267 0.481481 -98(TCGACTCC,+,0.00) 561_WT_peak_1165 chr10 126406754 126406973 + 53 NA intron (NM_014661, intron 1 of 4) intron (NM_014661, intron 1 of 4) 14266 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA 0.009132 0.504545 -131(AGGCACGA,-,0.00) 561_WT_peak_2289 chr14 75229653 75229977 + 53 NA promoter-TSS (NM_019589) promoter-TSS (NM_019589) -254 NM_019589 56252 Hs.531111 NM_019589 ENSG00000119596 YLPM1 C14orf170|PPP1R169|ZAP113|ZAP3 YLP motif containing 1 protein-coding 0.027778 0.403077 561_WT_peak_3333 chr17 73008600 73008966 + 53 NA promoter-TSS (NM_001545) promoter-TSS (NM_001545) 3 NM_001545 3396 Hs.407955 NM_001545 HPRD:04299 ICT1 DS-1|DS1|MRP-L58 immature colon carcinoma transcript 1 protein-coding 0.095628 0.692098 54(CGAGCCGGAGTC,+,0.00) -146(CAGGCCTCCCGG,+,0.00) 97(GCCGGGCG,+,0.00) -44(CGGCTCGA,-,0.00) -67(TGCGCGGA,-,0.00) 14(GAGCATGGCGGC,-,0.00) -150(CAACCAGGCCTC,-,0.00) 561_WT_peak_7258 chr9 37592317 37592753 + 53 NA 5' UTR (NM_001134485, exon 1 of 2) 5' UTR (NM_001134485, exon 1 of 2) 101 NM_001001790 401505 Hs.130774 NM_001001790 HPRD:16672 TOMM5 C9orf105|Tom5|bA613M10.3 translocase of outer mitochondrial membrane 5 homolog (yeast) protein-coding 0.089450 0.627002 22(CGGCGCGA,-,0.00) 132(ACTTCCTGTTCC,-,0.00) 116(AACTCGGCCT,-,0.00) 101(CCGCCTCG,-,0.00) 561_WT_peak_2345 chr14 94429705 94429885 + 53 NA intron (NM_001202429, intron 2 of 9) intron (NM_001202429, intron 2 of 9) -6028 NM_016150 51676 Hs.510327 NM_016150 HPRD:05768 ASB2 ASB-2 ankyrin repeat and SOCS box containing 2 protein-coding 0.022222 0.486188 561_WT_peak_1439 chr11 85358987 85359262 + 53 NA 5' UTR (NM_032273, exon 1 of 5) 5' UTR (NM_032273, exon 1 of 5) 161 NM_001244735 84233 Hs.533725 NM_032273 HPRD:13216 TMEM126A OPA7 transmembrane protein 126A protein-coding 0.076364 0.612319 -5(CGGGGGAGGGGG,-,0.00) -152(CGGCGCCCGCCC,+,0.00) -134(CGTCACGA,-,0.00) 72(CGCGTAAA,+,0.00) 38(CGACGCGG,+,0.00) -73(CCGGCGTGGCTG,+,0.00) 561_WT_peak_345 chr1 101702098 101702383 + 53 NA promoter-TSS (NM_001400) promoter-TSS (NM_001400) -65 NM_001400 1901 Hs.154210 NM_001400 HPRD:03578 S1PR1 CD363|CHEDG1|D1S3362|ECGF1|EDG-1|EDG1|S1P1 sphingosine-1-phosphate receptor 1 protein-coding 0.024561 0.479021 -154(AAGTCTCT,+,0.00) -38(GGCTCCGCCC,-,0.00) 561_WT_peak_3424 chr18 9083871 9084211 + 53 NA Intergenic Intergenic -18587 NM_021074 4729 Hs.464572 NM_021074 HPRD:02757 NDUFV2 CI-24k NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa protein-coding 0.008824 0.325513 561_WT_peak_7116 chr8 117886474 117886647 + 53 NA promoter-TSS (NR_033886) promoter-TSS (NR_033886) -103 NR_033886 644660 Hs.706174 NR_033886 ENSG00000253327 RAD21-AS1 C8orf81|NCRNA00255 RAD21 antisense RNA 1 ncRNA 0.057803 0.603448 -144(CCCCTCCCTCCG,-,0.00) -122(TTTCCCCG,-,0.00) -138(CCTCCGCAGC,-,0.00) 561_WT_peak_2782 chr16 30546317 30546542 + 53 NA promoter-TSS (NM_023931) promoter-TSS (NM_023931) -235 NM_023931 65988 Hs.592032 NM_023931 ZNF747 - zinc finger protein 747 protein-coding 0.075556 0.579646 37(CAGCCTCTTCCC,-,0.00) -99(CGGGTTTG,-,0.00) -153(GCCGCGCA,+,0.00) -143(CTCCGGCCCCGC,-,0.00) -123(GCGGCGCAGC,+,0.00),-123(GCGGCGCAGC,-,0.00) 561_WT_peak_1693 chr12 50898892 50899066 + 53 NA exon (NM_173602, exon 1 of 38) exon (NM_173602, exon 1 of 38) 211 NM_173602 57609 Hs.505516 NM_020849 HPRD:08751 DIP2B - DIP2 disco-interacting protein 2 homolog B (Drosophila) protein-coding 0.120690 0.754286 -137(CTGGGATGGCGG,-,0.00),-20(CCGGGGAGAGGG,-,0.00) -51(GAGCTGGAGCTC,-,0.00) -128(CGGAACGA,-,0.00) -107(CGCCGGCCGCGG,-,0.00),-26(GCCGGGCCGGGG,+,0.00) -28(GAGCCGGGCCGG,-,0.00) 561_WT_peak_2983 chr17 2718055 2718297 + 53 NA intron (NM_015085, intron 2 of 24) intron (NM_015085, intron 2 of 24) 18444 NM_001100398 23108 Hs.499659 NM_015085 HPRD:17028 RAP1GAP2 GARNL4|RAP1GA3 RAP1 GTPase activating protein 2 protein-coding 0.037190 0.604938 -117(AGCCACAT,-,0.00) -95(GCCCTGCCCT,+,0.00) 54(CCTGCCATGCCC,+,0.00) 561_WT_peak_4389 chr2 187454531 187454816 + 53 NA promoter-TSS (NM_002210) promoter-TSS (NM_002210) -117 NM_002210 3685 Hs.436873 NM_002210 HPRD:01903 ITGAV CD51|MSK8|VNRA|VTNR integrin, alpha V protein-coding 0.077193 0.713287 0(CAGCCTCCCGGG,+,0.00) -87(GGCGGCGA,-,0.00) 109(CGTGGAGCGGCG,+,0.00) -9(GCTCCACAGC,-,0.00) 561_WT_peak_6493 chr6 139612986 139613272 + 53 NA promoter-TSS (NM_153235) promoter-TSS (NM_153235) 79 NM_153235 167838 Hs.535820 NM_153235 HPRD:10793 TXLNB C6orf198|LST001|MDP77|dJ522B19.2 taxilin beta protein-coding 0.034965 0.543554 62(CGCACGCG,-,0.00) -6(GCGGGCTGGCTG,+,0.00) 561_WT_peak_7221 chr9 19161601 19161729 + 53 NA Intergenic Intergenic -34061 NM_001122 123 Hs.3416 NM_001122 HPRD:00057 PLIN2 ADFP|ADRP perilipin 2 protein-coding 0.000000 0.348837 561_WT_peak_4402 chr2 191980186 191980322 + 53 NA intron (NM_003151, intron 3 of 23) intron (NM_003151, intron 3 of 23) 35732 NM_003151 6775 Hs.80642 NM_003151 HPRD:02779 STAT4 SLEB11 signal transducer and activator of transcription 4 protein-coding 0.007353 0.423358 -84(CTGTTTTG,-,0.00) 561_WT_peak_1384 chr11 66610939 66611109 + 53 NA TTS (NR_048553) TTS (NR_048553) 141 NM_005133 9986 Hs.654972 NM_005133 HPRD:07289 RCE1 FACE2|RCE1A|RCE1B Ras converting CAAX endopeptidase 1 protein-coding 0.105882 0.730994 -125(GAGCGGCCGCCC,+,0.00) -119(CCGCCCGA,+,0.00) -100(TGGGCGGC,-,0.00) -115(CCGAGTCG,-,0.00),-114(CGAGTCGG,+,0.00) 561_WT_peak_4451 chr2 204871038 204871428 + 53 NA Intergenic MIRb|SINE|MIR 69762 NM_012092 29851 Hs.56247 NM_012092 HPRD:09196 ICOS AILIM|CD278|CVID1 inducible T-cell co-stimulator protein-coding 0.005128 0.388747 15(GAATCATGAAGC,+,0.00),55(GCTTTCTGTTTG,-,0.00) 561_WT_peak_5004 chr3 12235039 12235219 + 53 NA Intergenic Intergenic -34278 NM_003256 7079 Hs.591665 NM_003256 HPRD:03557 TIMP4 - TIMP metallopeptidase inhibitor 4 protein-coding 0.000000 0.375691 -69(AAGTGGCT,+,0.00) 561_WT_peak_4577 chr20 18774720 18774931 + 53 NA promoter-TSS (NR_026884) promoter-TSS (NR_026884) 132 NR_026885 100270804 Hs.598768 NR_026885 LOC100270804 - uncharacterized LOC100270804 ncRNA 0.056872 0.589623 -66(GGCGTGGA,-,0.00) 561_WT_peak_6517 chr6 151711700 151711886 + 53 NA intron (NM_020861, intron 1 of 2) CpG 884 NM_020861 57621 Hs.520073 NM_020861 HPRD:10314 ZBTB2 ZNF437 zinc finger and BTB domain containing 2 protein-coding 0.145161 0.748663 -116(CGAGGAGGCCGG,-,0.00) -139(AGAGCCGGAGAC,+,0.00) -99(CGCGTGCG,+,0.00),-97(CGTGCGCG,-,0.00) 8(CCGGTCGG,-,0.00) -89(CCCCCGCC,-,0.00) 10(GGTCGGAC,+,0.00) -135(CCGGAGACAGCG,+,0.00) -70(GGCGGAGCCGCA,+,0.00) 561_WT_peak_5874 chr5 110427996 110428196 + 53 NA exon (NM_139281, exon 1 of 23) exon (NM_139281, exon 1 of 23) 226 NM_139281 134430 Hs.533237 NM_139281 HPRD:10305 WDR36 GLC1G|TA-WDRP|TAWDRP|UTP21 WD repeat domain 36 protein-coding 0.090000 0.616915 -129(GGCGCCGGAAGC,+,0.00) -35(GAGCTGAGAGGA,-,0.00) -118(CGGTGTTG,-,0.00) 17(GCACGGCCAGCG,+,0.00) -140(GATTCGCAGC,-,0.00) 561_WT_peak_2058 chr13 52026559 52026750 + 53 NA promoter-TSS (NR_103812) promoter-TSS (NR_103812) 621 NM_012141 26512 Hs.439440 NM_012141 HPRD:05063 INTS6 DBI-1|DDX26|DDX26A|DICE1|HDB|INT6|Notchl2 integrator complex subunit 6 protein-coding 0.078534 0.640625 -48(GACACCGGGGCC,-,0.00) 9(GGCGGCGA,-,0.00) 18(CGCCGCTA,+,0.00) -156(ACCGCGCC,+,0.00) -44(CCGGGGCCCGAG,+,0.00) 561_WT_peak_6106 chr6 13615004 13615256 + 53 NA promoter-TSS (NM_016167) promoter-TSS (NM_016167) -429 NM_016167 51406 Hs.306242 NM_016167 NOL7 C6orf90|PQBP3|RARG-1|dJ223E5.2 nucleolar protein 7, 27kDa protein-coding 0.095238 0.604743 44(GGCGGCGA,-,0.00) 76(CGGTTTTC,-,0.00) -92(GGCCACGGCGGC,-,0.00) 561_WT_peak_3463 chr18 21033219 21033455 + 53 NA 5' UTR (NM_003831, exon 1 of 13) 5' UTR (NM_003831, exon 1 of 13) 550 NM_003831 8780 Hs.445511 NM_003831 HPRD:04659 RIOK3 SUDD RIO kinase 3 protein-coding 0.093220 0.670886 -123(CGCGGCCGCC,-,0.00) 62(AGCGGCCT,-,0.00) -109(TCGCCGCC,+,0.00) -127(CGGACGCG,-,0.00) -161(TAGCGAAG,-,0.00) -114(CGCCGTCGCCGC,-,0.00) -116(GCCGCCGTCGCC,+,0.00) 561_WT_peak_2075 chr13 77901128 77901343 + 53 NA promoter-TSS (NM_015057) promoter-TSS (NM_015057) -58 NM_015057 23077 Hs.591221 NM_015057 HPRD:10104 MYCBP2 PAM MYC binding protein 2, E3 ubiquitin protein ligase protein-coding 0.083721 0.708333 -162(CCGCCACCCCGG,+,0.00) 7(CCCTCTCCGCCA,+,0.00) 28(CCGCCTCG,-,0.00) 561_WT_peak_827 chr1 244816477 244816672 + 53 NA non-coding (NR_123736, exon 1 of 4) non-coding (NR_123736, exon 1 of 4) 224 NR_123736 51029 Hs.498317 NM_016076 HPRD:15153 DESI2 C1orf121|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1 desumoylating isopeptidase 2 protein-coding 0.123077 0.739796 -33(GGAGGAGGATGG,-,0.00) -85(GCCTCCGGCCCC,-,0.00) -44(GGCGGCCGCG,+,0.00) -89(AGCGGCCT,-,0.00),-63(AGCGGCTT,-,0.00) -37(GCGGGGAGGAGG,-,0.00) 4(CGTGTACG,+,0.00) -149(CGGGCCGGGC,-,0.00) -153(GCCGCGGG,+,0.00),-40(GCCGCGGG,+,0.00) -97(GGGGTGAGAGCG,-,0.00) -83(CTCCGGCCCCGC,-,0.00) -148(GGGCCGGGCT,+,0.00) -50(CGAGGCGG,+,0.00) 561_WT_peak_4981 chr3 3168668 3168983 + 53 NA intron (NM_182916, intron 1 of 7) CpG 225 NM_182916 51095 Hs.732725 NM_016000 HPRD:18227 TRNT1 CCA1|MtCCA tRNA nucleotidyl transferase, CCA-adding, 1 protein-coding 0.120635 0.708861 -31(AGAGGCCT,-,0.00),97(AGACGCTT,-,0.00) 83(CGCGGACG,+,0.00) -73(ACCGCGCC,+,0.00) -132(GGGCAGAGTT,+,0.00) 1(CGACGCGG,+,0.00),20(CCGCCACG,-,0.00),94(CCGAGACG,-,0.00) 561_WT_peak_1296 chr11 59324862 59325106 + 53 NA Intergenic tRNA-Phe-TTY|tRNA|tRNA 37647 NR_036120 100422880 NR_036120 MIR3162 - microRNA 3162 ncRNA 0.053279 0.522449 65(AAAAACCG,+,0.00) 561_WT_peak_2848 chr16 56485065 56485225 + 52 NA promoter-TSS (NM_018233) promoter-TSS (NM_018233) 116 NM_007006 11051 Hs.528834 NM_007006 HPRD:05400 NUDT21 CFIM25|CPSF5 nudix (nucleoside diphosphate linked moiety X)-type motif 21 protein-coding 0.093750 0.658385 -48(AAGCGGTT,+,0.00),-25(AGCGGCTA,-,0.00) -62(TTTCCCCG,-,0.00) -133(TGGGCGGT,-,0.00) -159(CCGGGGCCAGCC,+,0.00) 561_WT_peak_245 chr1 53662591 53662828 + 52 NA exon (NM_000098, exon 1 of 5) exon (NM_000098, exon 1 of 5) 608 NM_000098 1376 Hs.713535 NM_000098 HPRD:02802 CPT2 CPT1|CPTASE|IIAE4 carnitine palmitoyltransferase 2 protein-coding 0.109705 0.777311 -58(GGCTCCGGGCCC,-,0.00),22(GCCTCCGGGTCC,-,0.00) -163(TCGCCGCC,+,0.00) -146(CGGGACGA,-,0.00),-24(TCGTGCCC,+,0.00) 23(CCTCCGGGTCCC,-,0.00) -115(GCCTGGCCCCGG,-,0.00),-62(CGCCGGCTCCGG,-,0.00) -106(CGGGGCCCCGCG,-,0.00) 55(GGATCGGCCC,-,0.00) 561_WT_peak_2138 chr14 23771202 23771427 + 52 NA intron (NM_001276318, intron 1 of 4) CpG 743 NM_001276318 90673 Hs.601513 NM_001276318 ENSG00000235194 PPP1R3E - protein phosphatase 1, regulatory subunit 3E protein-coding 0.066667 0.707965 41(GGCGGAGGGCGT,-,0.00) -11(CCCCCGCC,-,0.00),9(GCCGCGGG,+,0.00) 21(GGGCTGGCAGGG,-,0.00) 561_WT_peak_2698 chr16 11348651 11348989 + 52 NA exon (NM_003745, exon 2 of 2) exon (NM_003745, exon 2 of 2) 1219 NM_003745 8651 Hs.50640 NM_003745 HPRD:04669 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP3 suppressor of cytokine signaling 1 protein-coding 0.118343 0.690265 -131(CGGCGGGCGCTG,-,0.00) 6(CGCACGCG,-,0.00) -72(GGGTTGAGGGGG,-,0.00) 43(GGCGCGGC,-,0.00) 15(CGCTGGCGCAGC,-,0.00) 45(CGCGGCGCCGCC,+,0.00),45(CGCGGCGCCGCC,-,0.00) 116(AAAGCGGCCG,-,0.00) 52(CCGCCACG,-,0.00) 22(GCAGCGGGGC,+,0.00) 23(CAGCGGGGCCCC,-,0.00),119(GCGGCCGGCCTG,+,0.00) 561_WT_peak_3731 chr19 36239174 36239389 + 52 NA promoter-TSS (NM_019104) promoter-TSS (NM_019104) 19 NM_019104 55957 Hs.529100 NM_019104 HPRD:16872 LIN37 F25965|ZK418.4|lin-37 lin-37 DREAM MuvB core complex component protein-coding 0.051163 0.597222 561_WT_peak_4026 chr2 37384265 37384439 + 52 NA promoter-TSS (NM_002759) promoter-TSS (NM_002759) -162 NM_001135651 5610 Hs.131431 NM_002759 HPRD:01468 EIF2AK2 EIF2AK1|PKR|PPP1R83|PRKR eukaryotic translation initiation factor 2-alpha kinase 2 protein-coding 0.063218 0.662857 -89(CCCCGCCCCCGG,+,0.00) -90(CCCCCGCC,-,0.00) -48(CGCTGGCCGCAC,-,0.00) -113(CGGCCAGGACCC,-,0.00) 561_WT_peak_4913 chr22 39077779 39078203 + 52 NA promoter-TSS (NM_020243) promoter-TSS (NM_020243) 37 NM_020243 56993 Hs.595072 NM_020243 HPRD:06130 TOMM22 1C9-2|MST065|MSTP065|TOM22 translocase of outer mitochondrial membrane 22 homolog (yeast) protein-coding 0.113208 0.703529 136(GGAGGAGGACGA,-,0.00) -162(AGGCCTCT,+,0.00),238(AAGCGGCT,+,0.00) -127(CCGACGCC,+,0.00) -51(CGCCCGGC,-,0.00) 52(CGTCGCTG,+,0.00) -13(GTCCGCCG,-,0.00) -39(GCCTCGGCTCCC,-,0.00) 19(GCTTCCGGTGTC,-,0.00) 109(CGACGCGG,+,0.00) -112(GGCCAGGGCTGC,-,0.00) -160(GCCTCTCAGC,-,0.00) 561_WT_peak_5373 chr3 196669604 196669789 + 52 NA promoter-TSS (NM_007362) promoter-TSS (NM_007362) 202 NR_024388 152217 Hs.118820 NR_024388 NCBP2-AS2 - NCBP2 antisense RNA 2 (head to head) ncRNA 0.118919 0.752688 -105(ATCCGACG,-,0.00) -8(CCGTGGGCTCCC,-,0.00) -55(GCGGGGCCAGGA,+,0.00) -45(GACGCGGCCC,-,0.00) -96(GCGGCGCAGC,+,0.00),-96(GCGGCGCAGC,-,0.00),-58(GCTGCGGGGC,+,0.00) 561_WT_peak_1255 chr11 36375992 36376174 + 52 NA intron (NM_001160167, intron 1 of 8) intron (NM_001160167, intron 1 of 8) -21452 NM_024841 79899 Hs.19987 NM_024841 HPRD:07854 PRR5L PROTOR2 proline rich 5 like protein-coding 0.005495 0.333333 -145(GGGTTTTG,-,0.00) 561_WT_peak_6506 chr6 146056038 146056331 + 52 NA intron (NR_038246, intron 1 of 2) CpG 179 NR_038246 100507557 Hs.124537 NR_038244 ENSG00000235652 LOC100507557 - uncharacterized LOC100507557 ncRNA 0.116041 0.744898 -113(GGCGGCCGGG,+,0.00) 113(AGGCGTCT,+,0.00) -120(GCGGGAAGGCGG,-,0.00) -56(GGCGGCGA,-,0.00) 83(GGGCCGGAGCTC,-,0.00) 104(GCCGGGGG,+,0.00) 8(CGGGCAAA,+,0.00) -75(GGAAGCCGGAGG,+,0.00) -65(GGCGCGGC,-,0.00) -55(GCGGCGACAGCG,+,0.00),35(CCGGGGCCTGCG,+,0.00),44(GCGGGGCCTGCC,+,0.00) 31(GCCGCCGGGGCC,+,0.00) 46(GGGGCCTGCCCG,+,0.00) 561_WT_peak_1336 chr11 64739294 64739669 + 52 NA promoter-TSS (NM_001037225) promoter-TSS (NM_001037225) 82 NM_001300803 283129 Hs.567793 NM_001037225 HPRD:18761 C11orf85 - chromosome 11 open reading frame 85 protein-coding 0.093333 0.630319 190(TCGACACC,+,0.00) 108(CGCACGCG,-,0.00),172(CGCGTGCG,+,0.00) 80(TCGTGCCG,+,0.00) 84(GCCGCGCA,+,0.00) -36(AAAGTGGCCC,-,0.00) 561_WT_peak_1533 chr11 134094094 134094420 + 52 NA promoter-TSS (NM_052875) promoter-TSS (NM_052875) 169 NM_015261 23310 Hs.438550 NM_015261 HPRD:11062 NCAPD3 CAP-D3|CAPD3|hCAP-D3|hHCP-6|hcp-6 non-SMC condensin II complex, subunit D3 protein-coding 0.073620 0.538226 -53(CGCGTGCG,+,0.00) 155(CCGACCGC,+,0.00) 106(CGGCACGC,-,0.00) -156(TTTTCCCG,-,0.00) 102(TGCGCGGC,-,0.00) -151(CCGCCTCG,-,0.00),67(CCGAGAAG,-,0.00) 146(GCTGCCATGCCG,+,0.00) 561_WT_peak_3600 chr19 6801616 6801800 + 52 NA intron (NM_001258207, intron 1 of 25) intron (NM_001258207, intron 1 of 25) 29029 NM_005428 7409 Hs.116237 NM_005428 HPRD:01284 VAV1 VAV vav 1 guanine nucleotide exchange factor protein-coding 0.032609 0.632432 -5(AGAGGCCT,-,0.00),-3(AGGCCTCT,+,0.00) 561_WT_peak_3652 chr19 14317671 14317907 + 52 NA promoter-TSS (NM_014921) promoter-TSS (NM_014921) -792 NM_014921 22859 Hs.94229 NM_014921 LPHN1 CIRL1|CL1|LEC2 latrophilin 1 protein-coding 0.110169 0.696203 -143(CGGCCCGGAGTC,+,0.00),-85(CGGCCCGAAAAC,+,0.00) -133(TCGCCGCC,+,0.00) -85(CGGCCCGA,-,0.00) -9(AAGCGACG,-,0.00) -150(CAAAACCC,+,0.00) -147(AACCCGGCCC,-,0.00) 561_WT_peak_4547 chr20 3364920 3365114 + 52 NA intron (NM_001009984, intron 1 of 36) U3|snRNA|snRNA 23292 NM_001009984 25943 Hs.516853 NM_001009984 ENSG00000088854 C20orf194 - chromosome 20 open reading frame 194 protein-coding 0.005155 0.446154 561_WT_peak_4808 chr21 43608585 43608755 + 52 NA Intergenic Intergenic -11129 NM_207627 9619 Hs.124649 NM_004915 HPRD:04355 ABCG1 ABC8|WHITE1 ATP-binding cassette, sub-family G (WHITE), member 1 protein-coding 0.011765 0.444444 -112(AGGGAGAAGGGG,+,0.00) -153(GGGCTAAGATGG,-,0.00) 561_WT_peak_6180 chr6 26550487 26550692 + 52 NA Intergenic MER41C|LTR|ERV1 12017 NM_006353 10473 Hs.236774 NM_006353 HMGN4 HMG17L3|NHC high mobility group nucleosomal binding domain 4 protein-coding 0.048780 0.543689 -2(TCGTGCCA,+,0.00) 561_WT_peak_3336 chr17 73127582 73127795 + 52 NA exon (NM_001252377, exon 1 of 4) exon (NM_001252377, exon 1 of 4) 202 NM_001252377 30833 Hs.67201 NM_014595 HPRD:11833 NT5C DNT|DNT1|HEL74|P5N2|PN-I|PN-II|UMPH2|cdN|dNT-1 5', 3'-nucleotidase, cytosolic protein-coding 0.140845 0.766355 -3(GGCCTCGA,-,0.00) 38(CGCGCACG,+,0.00) -110(TCGGGCCG,+,0.00),-54(CGGCACGT,-,0.00) -99(GGCGCGGT,-,0.00) -154(GCGGGCCCTGCC,+,0.00) 8(CGGCCAGGACGC,-,0.00) 561_WT_peak_2390 chr14 105953671 105953991 + 52 NA intron (NM_001311, intron 2 of 5) CpG-7559 574 NM_001311 1396 Hs.70327 NM_001311 HPRD:00469 CRIP1 CRHP|CRIP|CRP-1|CRP1 cysteine-rich protein 1 (intestinal) protein-coding 0.093750 0.738318 -124(CCGGGGGCGCTG,-,0.00),-65(CCGCCTGCCCCG,+,0.00) -154(GGCGACGA,-,0.00) -99(GCGCCCCAGCCT,+,0.00),126(GGGCTGGGGCCG,-,0.00) -31(GTCCGAGG,-,0.00),55(GTCCTACG,-,0.00) 99(GGGACCCGCAGG,+,0.00) 134(GCCGCGCC,+,0.00) 127(GGCTGGGGCCGC,-,0.00) -104(GGGCGGCGCC,+,0.00),132(GGGCCGCGCC,+,0.00) 139(GCCCCCCAGC,-,0.00) -77(CAGCCTGGCCCG,-,0.00) 561_WT_peak_1884 chr12 120933573 120933824 + 52 NA promoter-TSS (NM_003746) promoter-TSS (NM_003746) 51 NR_038854 100506668 Hs.660080 NR_038854 ENSG00000248008 DYNLL1-AS1 - DYNLL1 antisense RNA 1 ncRNA 0.059761 0.607143 -18(CCGACGCC,+,0.00) -80(CGGCCGGGGCTC,-,0.00) 561_WT_peak_6641-2 chr7 36911458 36911592 + 52 NA intron (NR_038120, intron 3 of 5) intron (NR_038120, intron 3 of 5) 47512 NR_031604 100302113 NR_031604 MIR1200 MIRN1200|hsa-mir-1200 microRNA 1200 ncRNA 0.000000 0.451852 -111(AGGCCTCT,+,0.00) 561_WT_peak_1506 chr11 118972717 118972719 + 52 NA promoter-TSS (NM_001382) promoter-TSS (NM_001382) 67 NM_001382 1798 Hs.524081 NM_001382 HPRD:01879 DPAGT1 ALG7|CDG-Ij|CDG1J|CMSTA2|D11S366|DGPT|DPAGT|DPAGT2|G1PT|GPT|UAGT|UGAT dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) protein-coding 0.000000 0.333333 561_WT_peak_3969 chr2 12647543 12647751 + 52 NA intron (NR_110196, intron 4 of 5) intron (NR_110196, intron 4 of 5) -209351 NR_027303 28951 Hs.467751 NM_021643 HPRD:18224 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding 0.024038 0.492823 -104(AGCCGCCT,-,0.00) 561_WT_peak_3778 chr19 42391860 42392068 + 52 NA intron (NM_199002, intron 1 of 28) intron (NM_199002, intron 1 of 28) 3518 NM_199002 9138 Hs.631550 NM_004706 HPRD:03511 ARHGEF1 GEF1|LBCL2|LSC|P115-RHOGEF|SUB1.5 Rho guanine nucleotide exchange factor (GEF) 1 protein-coding 0.028846 0.655502 -85(TCCCGTCCCT,+,0.00) -79(CCCTGGGCTCCC,-,0.00) -66(CCCCCTGGCGGG,-,0.00) -13(GCTGCGGAGG,+,0.00) 561_WT_peak_466 chr1 147860686 147860978 + 52 NA promoter-TSS (NR_121646).2 promoter-TSS (NR_121646).2 -29 NR_121646 26860 NR_121646 RNU1-13P RNU1-71|RNU1P6|RNVU1-2|U1.1|U1P1|vU1.2 RNA, U1 small nuclear 13, pseudogene snRNA 0.065068 0.617747 -28(CCCGTACG,+,0.00),-26(CGTACGCC,-,0.00) 25(CCCTCCTAGCCC,+,0.00) -12(TTTACACG,-,0.00) 9(CCCGCGCA,+,0.00) 2(CGCTTGCCCCGC,-,0.00) 561_WT_peak_7537 chrX 47695961 47696170 + 52 NA promoter-TSS (NM_007137) promoter-TSS (NM_007137) -236 NM_007137 347344 Hs.114246 NM_007137 ENSG00000197779 ZNF81 HFZ20|MRX45|dJ54B20.6 zinc finger protein 81 protein-coding 0.062201 0.600000 -23(GGCGCGGC,-,0.00) 561_WT_peak_5696 chr5 39074698 39075104 + 52 NA promoter-TSS (NM_152756) promoter-TSS (NM_152756) -391 NM_001285439 253260 Hs.407926 NM_152756 HPRD:10682 RICTOR AVO3|PIA|hAVO3 RPTOR independent companion of MTOR, complex 2 protein-coding 0.068966 0.587224 -39(GGAGGAGGCCGG,-,0.00) 225(AAGTGGTT,+,0.00) -46(GCGGGGAGGAGG,-,0.00) -156(GTCCGCCG,-,0.00) 91(GCTGCGCA,+,0.00) 1(CCGGCCTGCCAG,+,0.00) 561_WT_peak_1760 chr12 69724746 69724856 + 52 NA Intergenic Intergenic -17333 NM_000239 4069 Hs.524579 NM_000239 HPRD:01085 LYZ LZM lysozyme protein-coding 0.009091 0.360360 -91(ATGTCGCT,+,0.00) 561_WT_peak_3105 chr17 28690946 28691123 + 52 NA Intergenic Intergenic -14908 NM_001304 1362 Hs.446079 NM_001304 HPRD:04375 CPD GP180 carboxypeptidase D protein-coding 0.005650 0.471910 -33(CTGGTAAA,+,0.00) 561_WT_peak_4823 chr22 17652388 17652645 + 52 NA Intergenic CpG -6339 NM_017829 27440 Hs.26890 NM_017829 HPRD:16703 CECR5 - cat eye syndrome chromosome region, candidate 5 protein-coding 0.136187 0.782946 46(TCGCCGCC,+,0.00) 66(TTTCCCCG,-,0.00) 12(CCATCGCCTCCC,-,0.00) -56(GGCGCGGC,-,0.00),-31(GCCGCGCC,+,0.00),-22(CCCGCGCA,+,0.00) -28(GCGCCGCCCGCG,+,0.00) -90(CACCCGGGCCGG,-,0.00) 561_WT_peak_49 chr1 9599708 9599891 + 52 NA exon (NM_032315, exon 1 of 7) exon (NM_032315, exon 1 of 7) 271 NM_032315 84275 Hs.568613 NM_032315 SLC25A33 BMSC-MCP|PNC1 solute carrier family 25 (pyrimidine nucleotide carrier), member 33 protein-coding 0.169399 0.804348 -61(GTTCCCGGGCCC,-,0.00) -152(GGCGGCGA,-,0.00) -120(TGGCGACG,-,0.00) -130(GGCGCGGC,-,0.00),-3(GGCGCGGC,-,0.00) -138(GCGGAGCCGGCG,+,0.00),-57(CCGGGCCCAGCC,+,0.00),0(GCGGCCCCAGCC,+,0.00) -139(CGCGGAGCCGGC,+,0.00) -3(GGCGCGGCCC,-,0.00) -127(GCGGCCATGGCG,+,0.00),-125(GGCCATGGCGAC,-,0.00) -141(GCCGCGGAGC,+,0.00) 561_WT_peak_5231 chr3 122399946 122400127 + 52 NA intron (NM_017554, intron 1 of 16) CpG 364 NM_017554 54625 Hs.518203 NM_017554 HPRD:11421 PARP14 ARTD8|BAL2|PARP-14|pART8 poly (ADP-ribose) polymerase family, member 14 protein-coding 0.116022 0.774725 -105(CCGCCCGA,+,0.00) -66(GGCGGGGG,+,0.00),-60(GGCGGGGG,+,0.00),-54(GGCGGGGG,+,0.00) -65(GCGGGGGCGGGG,+,0.00),-59(GCGGGGGCGGGG,+,0.00) 561_WT_peak_6696 chr7 66461876 66462068 + 52 NA intron (NM_018264, intron 1 of 15) CpG 180 NM_018264 55253 Hs.520917 NM_018264 HPRD:07711 TYW1 RSAFD1|TYW1A|YPL207W tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) protein-coding 0.088542 0.637306 561_WT_peak_5860 chr5 98264389 98264736 + 52 NA promoter-TSS (NR_036530) promoter-TSS (NR_036530) -276 NR_036530 100289230 Hs.552095 NR_036530 LOC100289230 - uncharacterized LOC100289230 ncRNA 0.158501 0.709770 20(AGCCGCCA,-,0.00) 100(CCGCCTCCCGCG,+,0.00) -46(TCGTCGCC,+,0.00),-43(TCGCCGCC,+,0.00) 159(GGGCGGGCGCGC,-,0.00) 115(CGTAAGCG,-,0.00),168(CGCGCACG,+,0.00) 142(CCGACAGA,+,0.00) 12(CCCCCGGC,-,0.00) -8(CCGCTCCCTCCG,-,0.00) 97(CCTCCGCCTCCC,-,0.00) -42(CGCCGCCGCCGC,-,0.00),-39(CGCCGCCGCCGC,-,0.00),-36(CGCCGCCGCCGC,-,0.00) 153(CGAGGCGG,+,0.00) 21(GCCGCCATGACG,+,0.00),23(CGCCATGACGCC,-,0.00) -143(GGTCCGCAGC,-,0.00) 561_WT_peak_1418 chr11 76299371 76299543 + 52 NA Intergenic Intergenic 81587 NM_005512 2615 Hs.151641 NM_005512 HPRD:00667 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding 0.017442 0.566474 -107(GGCGGGGG,+,0.00) -139(GGGCTGGGAAGG,-,0.00) -137(GCTGGGAAGG,+,0.00) 561_WT_peak_6121 chr6 20402789 20403148 + 52 NA promoter-TSS (NM_001243076) promoter-TSS (NM_001243076) 831 NM_001949 1871 Hs.269408 NM_001949 HPRD:02693 E2F3 E2F-3 E2F transcription factor 3 protein-coding 0.114206 0.727778 25(GGGCTGCCCCTC,-,0.00) -128(GCGGCGGCAGCG,+,0.00),-119(GCGGCGGCGGCG,+,0.00),-116(GCGGCGGCGGCG,+,0.00) 107(CGCGGGGCGGCG,+,0.00) -136(GCTGGGACGC,+,0.00) 561_WT_peak_4635 chr20 39632081 39632236 + 52 NA Intergenic MIR3|SINE|MIR -25304 NM_003286 7150 Hs.472737 NM_003286 HPRD:00535 TOP1 TOPI topoisomerase (DNA) I protein-coding 0.006452 0.512821 561_WT_peak_3839 chr19 49250408 49250582 + 52 NA promoter-TSS (NM_182575) promoter-TSS (NM_182575) -329 NM_182575 284359 Hs.400688 NM_182575 HPRD:14589 IZUMO1 IZUMO izumo sperm-egg fusion 1 protein-coding 0.057471 0.582857 -154(AGGCCGCT,+,0.00),-123(AAACGGCT,+,0.00) -59(GGGCCTCTTT,+,0.00) -159(CCCCCAGGCCGC,-,0.00) 561_WT_peak_624 chr1 173445717 173445854 + 52 NA promoter-TSS (NM_004905) promoter-TSS (NM_004905) 509 NR_037845 100506023 Hs.731284 NR_037845 LOC100506023 - uncharacterized LOC100506023 ncRNA 0.007299 0.398551 -67(AGCCACTT,-,0.00) 561_WT_peak_6255 chr6 29910840 29911015 + 52 NA intron (NM_002116, intron 2 of 7) CpG-21899 680 NM_002116 3105 Hs.181244 NM_002116 HPRD:00826 HLA-A HLAA major histocompatibility complex, class I, A protein-coding 0.091429 0.693182 -131(GTCTCCGGGTCC,-,0.00) -15(TTGGTCGG,-,0.00) -104(GCCGCGGG,+,0.00) -8(GGGCTGGGCGGG,-,0.00) -59(TTTACCCG,-,0.00) -110(CCCGAAGCCGCG,+,0.00) -3(GGGCGGGGCT,+,0.00) 561_WT_peak_461 chr1 147533017 147533233 + 52 NA Intergenic AluJb|SINE|Alu -45937 NR_111936 100034743 Hs.696575 NR_003377 ENSG00000215860 PDZK1P2 OTTHUMT00000038524|PDZK1P1 PDZ domain containing 1 pseudogene 2 pseudo 0.046296 0.548387 -66(CCGAGCGA,+,0.00) 18(TAGAGACG,-,0.00) 561_WT_peak_2359 chr14 100069918 100070207 + 52 NA exon (NM_001144995, exon 1 of 6) exon (NM_001144995, exon 1 of 6) 665 NM_001144995 317762 Hs.709288 NM_001144995 ENSG00000205476 CCDC85C - coiled-coil domain containing 85C protein-coding 0.141869 0.731034 -64(GTCGTCGA,-,0.00) -141(TCGTGCCA,+,0.00) -79(CCCCTTCTGCCG,-,0.00) 115(GCCGCGCC,+,0.00) 104(GCGCCGCAGC,-,0.00) 561_WT_peak_1635 chr12 27933288 27933566 + 52 NA exon (NM_020782, exon 1 of 3) exon (NM_020782, exon 1 of 3) 240 NM_020782 57542 Hs.505104 NM_020782 HPRD:17237 KLHL42 Ctb9|KLHDC5 kelch-like family member 42 protein-coding 0.115108 0.720430 -110(AGCGACTA,-,0.00) 33(CCGCGAAGGCTG,-,0.00) 17(TCAACGCC,+,0.00) -2(CGGCTGGTGCTG,-,0.00) 60(CGGGGAAA,+,0.00) -133(GCAAGAGGAAGC,+,0.00) -28(TGCGCGGC,-,0.00) -12(GCCGGGCCTGCG,+,0.00),25(GGCGGGGCCCGC,-,0.00),26(GCGGGGCCCGCG,+,0.00) 33(CCGCGAAG,-,0.00) -30(GCTGCGCGGC,+,0.00) 561_WT_peak_5029 chr3 17783754 17784024 + 52 NA Intergenic CpG -1490 NM_014744 9779 Hs.475629 NM_014744 HPRD:10262 TBC1D5 - TBC1 domain family, member 5 protein-coding 0.077778 0.645756 -11(GGAGGAAGGCGG,-,0.00),94(TCCTCCTCCTCC,+,0.00) -89(CGGCGCGA,-,0.00) -60(AGGCTGAGTGGG,-,0.00) -156(GTCCGCCG,-,0.00) 50(TTTACCTG,-,0.00) -150(CGTGGCGG,+,0.00) -155(TCCGCCGTGGCG,+,0.00),-153(CGCCGTGGCGGC,-,0.00) 70(GCTCCCCAGC,-,0.00) 561_WT_peak_266 chr1 64059154 64059394 + 52 NA promoter-TSS (NM_001172819) promoter-TSS (NM_001172819) -206 NM_001172819 5236 Hs.1869 NM_002633 HPRD:01389 PGM1 CDG1T|GSD14 phosphoglucomutase 1 protein-coding 0.087500 0.639004 -108(GGGCACGA,-,0.00),-5(CGGCAGGA,-,0.00) -86(CGGGTGAA,+,0.00) -20(GTGGAGCCGGCG,+,0.00),20(GCGGGGACGGCC,+,0.00) -57(CTACGCGG,+,0.00) 561_WT_peak_6340 chr6 44672183 44672427 + 52 NA Intergenic Intergenic 268927 NR_039785 100616352 NR_039785 MIR4642 - microRNA 4642 ncRNA 0.024590 0.497959 -19(TTTACCCT,-,0.00) 561_WT_peak_7296 chr9 73034500 73034821 + 52 NA Intergenic CpG -5087 NM_001206 687 Hs.150557 NM_001206 HPRD:04211 KLF9 BTEB|BTEB1 Kruppel-like factor 9 protein-coding 0.059190 0.652174 -77(GGTGTCGA,-,0.00) -22(GGGCTGCGGGGG,-,0.00) 35(CGTGGCGG,+,0.00) 32(GGGCGTGGCGGG,-,0.00),117(CCCGCGATGGCC,+,0.00) -20(GCTGCGGGGG,+,0.00) 40(CGGGCAGGCCGG,-,0.00),48(CCGGCCAGGCTG,+,0.00) 561_WT_peak_7395 chr9 115095384 115095574 + 52 NA promoter-TSS (NM_001244898) promoter-TSS (NM_001244898) -173 NM_001244898 9991 Hs.269988 NM_005156 HPRD:09603 PTBP3 ROD1 polypyrimidine tract binding protein 3 protein-coding 0.126316 0.712042 -112(CGCGGAGGGCGG,-,0.00) -143(GGAGGCCGAG,+,0.00) -112(CGCGGAGGGCGG,-,0.00) -41(AGGAAGCAGCGG,+,0.00) 8(CGGCGGAC,+,0.00) -98(CTCGGCACCGCG,-,0.00),-22(CGGGGCGCCGCG,+,0.00),-22(CGGGGCGCCGCG,-,0.00) 561_WT_peak_2530 chr15 67831918 67832121 + 52 NA Intergenic L1MB2|LINE|L1 -3002 NM_002757 5607 Hs.114198 NM_002757 HPRD:03951 MAP2K5 HsT17454|MAPKK5|MEK5|PRKMK5 mitogen-activated protein kinase kinase 5 protein-coding 0.000000 0.387255 3(CAGTTTTG,-,0.00) 561_WT_peak_1999 chr13 39612660 39612905 + 52 NA promoter-TSS (NM_025138) promoter-TSS (NM_025138) 334 NM_001017370 387921 Hs.507783 NM_001012754 HPRD:18377 NHLRC3 - NHL repeat containing 3 protein-coding 0.053061 0.601626 -161(GTCTTCGGGCCC,-,0.00) -89(AGACACCT,-,0.00) 5(TGGTTTTG,-,0.00),19(CGTTTTTG,-,0.00) 561_WT_peak_4671 chr20 48212010 48212395 + 52 NA Intergenic MLT1D|LTR|ERVL-MaLR -27495 NM_000961 5740 Hs.302085 NM_000961 HPRD:09046 PTGIS CYP8|CYP8A1|PGIS|PTGI prostaglandin I2 (prostacyclin) synthase protein-coding 0.028571 0.575130 146(GCTCAGCAGC,-,0.00) 561_WT_peak_6641 chr7 36911372 36911375 + 52 NA intron (NR_038120, intron 3 of 5) intron (NR_038120, intron 3 of 5) 47664 NR_031604 100302113 NR_031604 MIR1200 MIRN1200|hsa-mir-1200 microRNA 1200 ncRNA 0.000000 0.250000 561_WT_peak_7459 chr9 132650016 132650157 + 52 NA 3' UTR (NM_015033, exon 17 of 17) 3' UTR (NM_015033, exon 17 of 17) 18202 NR_106914 102466750 NR_106914 MIR6855 hsa-mir-6855 microRNA 6855 ncRNA 0.049645 0.464789 561_WT_peak_3137 chr17 34901287 34901530 + 52 NA intron (NM_024835, intron 1 of 13) CpG 671 NM_024835 79893 Hs.514116 NM_024835 HPRD:18337 GGNBP2 DIF-3|DIF3|LCRG1|LZK1|ZFP403|ZNF403 gametogenetin binding protein 2 protein-coding 0.135802 0.745902 -162(CGGCGCGA,-,0.00) -30(GCTGCGCA,+,0.00),-28(TGCGCAGC,-,0.00) -163(GCGGCGCGAGGG,+,0.00),61(GCGGCGGCGGCG,+,0.00),64(GCGGCGGCGGCG,+,0.00) -89(AACGCAGCCC,-,0.00) -30(GCTGCGCAGC,+,0.00),-30(GCTGCGCAGC,-,0.00) 561_WT_peak_264 chr1 63249702 63249872 + 52 NA promoter-TSS (NM_032852) promoter-TSS (NM_032852) 10 NM_032852 84938 Hs.7353 NM_032852 HPRD:07473 ATG4C APG4-C|APG4C|AUTL1|AUTL3 autophagy related 4C, cysteine peptidase protein-coding 0.094118 0.596491 -127(AAGTGGCT,+,0.00),-3(TGGCGGCT,+,0.00) -11(TGGTTTTG,-,0.00) -51(GCTGCGGCGC,+,0.00) 561_WT_peak_2678 chr16 3767627 3767816 + 52 NA promoter-TSS (NM_001272049) promoter-TSS (NM_001272049) -123 NM_001272049 10131 Hs.30345 NM_016292 HPRD:05868 TRAP1 HSP 75|HSP75|HSP90L|TRAP-1 TNF receptor-associated protein 1 protein-coding 0.132275 0.768421 -33(GGAGGTGGGGGA,-,0.00) -103(ACGGTCGG,-,0.00) -8(CCCCCGGC,-,0.00) -22(AGGTGGCCCCGC,-,0.00),-13(CGCCGCCCCCGG,-,0.00) -130(CGTGGCGG,+,0.00) -17(GCCCCGCCGC,-,0.00) 561_WT_peak_2294 chr14 75623752 75623919 + 52 NA intron (NM_006827, intron 1 of 4) intron (NM_006827, intron 1 of 4) 19514 NM_006827 10972 Hs.74137 NM_006827 HPRD:12013 TMED10 P24(DELTA)|S31I125|S31III125|TMP21|Tmp-21-I|p23 transmembrane emp24-like trafficking protein 10 (yeast) protein-coding 0.011976 0.452381 -77(CAGCCAGGATGC,-,0.00) 561_WT_peak_4522 chr2 241075793 241076030 + 52 NA promoter-TSS (NM_001163424) promoter-TSS (NM_001163424) -147 NM_138336 150678 Hs.293884 NM_138336 HPRD:17306 MYEOV2 - myeloma overexpressed 2 protein-coding 0.109705 0.701681 -136(CCCGGCCGCC,-,0.00),-58(GGCGGCCGGG,+,0.00) -124(CGCGTCCG,+,0.00),-122(CGTCCGCG,-,0.00) -54(GCCGGGCG,+,0.00) -60(TGGGCGGC,-,0.00) -57(GCGGCCGGGCGG,+,0.00) 561_WT_peak_3807 chr19 46145467 46145665 + 52 NA exon (NM_001193269, exon 2 of 22) exon (NM_001193269, exon 2 of 22) 661 NM_001242348 100287177 Hs.668611 NM_001242348 ENSG00000267757 C19orf83 - chromosome 19 open reading frame 83 protein-coding 0.101010 0.663317 -115(GACCGCCAGCTC,+,0.00) -41(TCGTGCCC,+,0.00) -71(CCGACACG,-,0.00) 561_WT_peak_3308 chr17 63052570 63052863 + 52 NA promoter-TSS (NM_001282425) promoter-TSS (NM_001282425) 204 NM_006572 10672 Hs.515018 NM_006572 HPRD:05100 GNA13 G13 guanine nucleotide binding protein (G protein), alpha 13 protein-coding 0.129693 0.724490 21(TCCACCTCCTCC,+,0.00) 70(CGGGGAGCGCGG,-,0.00),100(CAGGGAGGGAGG,-,0.00) 66(AGGGCGGGGA,-,0.00) -40(CGGCAGGA,-,0.00),-23(TCTTGCCG,+,0.00),85(CGGCCCGA,-,0.00) -147(TTTTCCCG,-,0.00) 9(CCTCCGGCTCCC,-,0.00) -17(CGCCGCCGCCGC,-,0.00),-14(CGCCGCCGCCGC,-,0.00),84(GCGGCCCGAGCG,+,0.00),93(GCGCGCCCAGGG,+,0.00) -46(CCGCGACG,-,0.00),-6(CCGCCTCG,-,0.00) 561_WT_peak_5156 chr3 72496527 72496812 + 52 NA promoter-TSS (NM_012234) promoter-TSS (NM_012234) -895 NM_012234 23429 Hs.7910 NM_012234 RYBP AAP1|DEDAF|YEAF1 RING1 and YY1 binding protein protein-coding 0.112281 0.706294 38(CCGCGTTCCCCC,+,0.00) 111(CCGGCCGA,+,0.00) -45(GCCGCGGG,+,0.00) -161(GCCGCGCC,+,0.00) -95(CCCCGGCCCCGA,-,0.00) -85(GAAGCCGCCC,-,0.00),35(GGACCGCGTT,+,0.00) 17(CCGACAAG,-,0.00) 561_WT_peak_5214 chr3 113942098 113942270 + 52 NA Intergenic Intergenic 14241 NM_007136 7634 Hs.271079 NM_007136 HPRD:01932 ZNF80 pT17 zinc finger protein 80 protein-coding 0.011628 0.375723 561_WT_peak_4427 chr2 198570206 198570386 + 52 NA exon (NM_138395, exon 1 of 1) exon (NM_138395, exon 1 of 1) 268 NM_138395 92935 Hs.744330 NM_138395 HPRD:14363 MARS2 MetRS|mtMetRS methionyl-tRNA synthetase 2, mitochondrial protein-coding 0.116667 0.646409 5(CACGGCCGCC,-,0.00) -47(CGGCACTA,-,0.00) -76(CGCGGCGCCGCA,+,0.00),-76(CGCGGCGCCGCA,-,0.00) -78(AACGCGGCGC,-,0.00) 2(CAGCACGGCCGC,-,0.00) 561_WT_peak_7652 chrY 16456885 16457102 + 52 NA Intergenic Intergenic -177495 NM_001206850 22829 Hs.439199 NM_014893 HPRD:11849 NLGN4Y - neuroligin 4, Y-linked protein-coding 0.004608 0.426606 561_WT_peak_7194 chr8 146126951 146127333 + 52 NA promoter-TSS (NM_001109689) promoter-TSS (NM_001109689) -296 NM_021061 58500 Hs.532277 NM_021061 HPRD:15758 ZNF250 ZFP647|ZNF647 zinc finger protein 250 protein-coding 0.102094 0.707572 194(CTCAGCCGCC,-,0.00) 197(AGCCGCCT,-,0.00) -156(CCGCCTGCCCGC,+,0.00),-38(CCGGCTCCCCGG,+,0.00) -148(CCGCCCGA,+,0.00) 44(TCCTGCCG,+,0.00) 14(CTTACCCG,-,0.00) 76(TGCCGGCCCCGC,-,0.00) 48(GCCGCCGTCGCC,+,0.00) 198(GCCGCCTGGCTG,+,0.00) 561_WT_peak_7522 chrX 39719632 39719869 + 52 NA Intergenic Intergenic 236969 NM_017745 54880 Hs.659681 NM_017745 HPRD:06458 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding 0.021097 0.529412 -48(CAGACACGCCGC,-,0.00) 561_WT_peak_5790 chr5 68513791 68513962 + 52 NA intron (NM_033281, intron 1 of 3) CpG 303 NM_033281 92259 Hs.631971 NM_033281 HPRD:17600 MRPS36 MRP-S36 mitochondrial ribosomal protein S36 protein-coding 0.093567 0.680233 -63(GGCGCCGA,-,0.00) -67(GTCCGGCG,-,0.00) -155(ACCGCGCC,+,0.00) -153(CGCGCCTCTGCG,-,0.00) 561_WT_peak_6478 chr6 134568442 134568806 + 52 NA intron (NM_001143676, intron 2 of 13) intron (NM_001143676, intron 2 of 13) -69614 NM_001143677 6446 Hs.510078 NM_005627 HPRD:04264 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding 0.013736 0.432877 178(TCGACCGA,+,0.00) 561_WT_peak_7399 chr9 117135267 117135521 + 51 NA intron (NM_030767, intron 4 of 21) intron (NM_030767, intron 4 of 21) 21291 NM_030767 80709 Hs.494895 NM_030767 HPRD:16148 AKNA - AT-hook transcription factor protein-coding 0.019685 0.631373 43(AAAGCAGGAAGC,+,0.00) 561_WT_peak_2962 chr16 90039362 90039532 + 51 NA promoter-TSS (NM_145039) promoter-TSS (NM_145039) -207 NM_145039 92806 Hs.513832 NM_145039 HPRD:08321 CENPBD1 - CENPB DNA-binding domains containing 1 protein-coding 0.088235 0.608187 -38(GGCGTTGA,-,0.00) -42(GCCGGGCG,+,0.00) -155(CCTCGCTA,+,0.00) -94(CCTCGGAC,+,0.00) -56(CGGCTTTG,-,0.00) 561_WT_peak_5419 chr4 13629305 13629751 + 51 NA promoter-TSS (NR_049814) promoter-TSS (NR_049814) 39 NR_049814 100847023 NR_049814 miRBase:MI0017980 MIR5091 - microRNA 5091 ncRNA 0.094170 0.619687 14(GGCGGCGA,-,0.00),109(GGCTTCGA,-,0.00) -29(GCCGGGCG,+,0.00) 7(CGGAAGTGGCGG,+,0.00),170(CCGCTTCATCCG,-,0.00) 25(TGGCGACG,-,0.00) 140(GGTCTGAGCGGG,-,0.00) -69(GTCCGGCG,-,0.00) 147(GCGGGGGCAGTG,+,0.00),162(TTCTGGCCCCGC,-,0.00) -54(CCGCGAAG,-,0.00),179(CCGCGACG,-,0.00) 561_WT_peak_7140 chr8 125551296 125551625 + 51 NA promoter-TSS (NR_027427) promoter-TSS (NR_027427) 117 NM_001278645 4715 Hs.15977 NM_005005 HPRD:03264 NDUFB9 B22|CI-B22|LYRM3|UQOR22 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa protein-coding 0.088146 0.669697 -21(GGCGTCGG,-,0.00) -71(TCCCGGCTCT,+,0.00) -110(GGCTGGCCCCGC,-,0.00),-59(GCGCGGCCGGGG,+,0.00) -124(AACTCCGCCC,-,0.00) 561_WT_peak_4480 chr2 222382688 222382857 + 51 NA intron (NM_004438, intron 3 of 17) intron (NM_004438, intron 3 of 17) 54238 NM_004438 2043 Hs.371218 NM_004438 HPRD:03719 EPHA4 HEK8|SEK|TYRO1 EPH receptor A4 protein-coding 0.005917 0.435294 -58(CTTTCCTGTTTC,-,0.00) 561_WT_peak_648 chr1 183440998 183441354 + 51 NA promoter-TSS (NM_201568) promoter-TSS (NM_201568) -59 NR_040063 284649 Hs.127384 NR_040063 ENSG00000232860 SMG7-AS1 DKFZP564C196 SMG7 antisense RNA 1 ncRNA 0.056180 0.616246 137(GGAGAAGGGTGG,-,0.00) 159(AGCCGCCA,-,0.00) -56(GGCGTTGA,-,0.00) 36(CGGCAGGA,-,0.00) 133(GGGAGGAGAAGG,+,0.00) 128(TGCGCGGG,-,0.00) -18(GGGCGGCGTT,+,0.00) 161(CCGCCAAG,-,0.00) 561_WT_peak_2257 chr14 64971120 64971376 + 51 NA promoter-TSS (NM_014950) promoter-TSS (NM_014950) -44 NM_014950 22890 Hs.605143 NM_014950 HPRD:15688 ZBTB1 ZNF909 zinc finger and BTB domain containing 1 protein-coding 0.082031 0.696498 -105(GGAGGAGGAGGA,-,0.00),-12(CCAGCCTCCTCG,+,0.00) 74(GGCGGGCGAG,+,0.00) 4(TCGACGCA,+,0.00) -49(CGCCGCCGCCGC,-,0.00) -41(CCGCGACG,-,0.00) 561_WT_peak_2099 chr13 111366958 111367283 + 51 NA promoter-TSS (NM_005537) promoter-TSS (NM_005537) -239 NM_005537 3621 Hs.46700 NM_005537 HPRD:03337 ING1 p24ING1c|p33|p33ING1|p33ING1b|p47|p47ING1a inhibitor of growth family, member 1 protein-coding 0.110769 0.699387 -92(GGAGGAGGGCGG,-,0.00) -158(GATTACGGCGCG,-,0.00) 57(GTCGGCCGCC,-,0.00) -112(GGCGCCGA,-,0.00),-13(TCGTCGCC,+,0.00),130(GCGACGCC,+,0.00) 54(TAGGTCGG,-,0.00) 65(CCCCCGCC,-,0.00) -153(CGGCGCGA,-,0.00) -4(CCCACTCAGTCC,+,0.00),67(CCCGCCCAGCCC,+,0.00) 60(GGCCGCCCCCGC,-,0.00) -108(CCGAGACG,-,0.00),106(CCGAGTAG,-,0.00) 561_WT_peak_5248 chr3 128839299 128839499 + 51 NA intron (NM_001204890, intron 11 of 12) intron (NM_001204890, intron 11 of 12) 1248 NM_198490 339122 Hs.381132 NM_198490 HPRD:17947 RAB43 RAB11B|RAB41 RAB43, member RAS oncogene family protein-coding 0.010000 0.447761 561_WT_peak_2713 chr16 18812625 18812833 + 51 NA intron (NM_015161, intron 1 of 5) CpG 128 NM_015161 23204 Hs.634882 NM_015161 HPRD:09641 ARL6IP1 AIP1|ARL6IP|ARMER|SPG61 ADP-ribosylation factor-like 6 interacting protein 1 protein-coding 0.091346 0.688995 -14(TCTCCCTCCGCC,+,0.00) -163(TCGTCGCC,+,0.00) -73(TCGCTCGG,-,0.00) -141(AGGGCCGGGC,-,0.00) -132(CCCGCGGC,-,0.00) -72(CGCTCGGCTCCC,-,0.00) -139(GGCCGGGCCCGC,-,0.00),-138(GCCGGGCCCGCG,+,0.00) 0(CGTCTCGG,+,0.00) -50(CAGCCAGGACTC,-,0.00) 561_WT_peak_853 chr10 4014928 4015103 + 51 NA Intergenic Intergenic -18337 NR_106726 102464829 NR_106726 MIR6078 hsa-mir-6078 microRNA 6078 ncRNA 0.011429 0.494318 561_WT_peak_6100 chr6 11258397 11258761 + 51 NA intron (NM_001142393, intron 2 of 7) intron (NM_001142393, intron 2 of 7) -25664 NM_001271033 4739 Hs.37982 NM_006403 HPRD:11888 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding 0.000000 0.413699 115(AAGTGGTT,+,0.00) -6(GAGCCCCAGCAC,+,0.00) 118(TGGTTTTG,-,0.00) 2(GCACCCTGGCTG,+,0.00) 561_WT_peak_3948 chr2 3523474 3523663 + 51 NA promoter-TSS (NM_018269) promoter-TSS (NM_018269) -218 NM_018269 55256 Hs.502773 NM_018269 HPRD:17607 ADI1 APL1|ARD|Fe-ARD|MTCBP1|Ni-ARD|SIPL|mtnD acireductone dioxygenase 1 protein-coding 0.084656 0.552632 -158(CCCGCGGC,-,0.00) -150(CCGGGGCCAGCC,+,0.00) 561_WT_peak_2681 chr16 4464489 4464676 + 51 NA intron (NM_024535, intron 1 of 27) intron (NM_024535, intron 1 of 27) 2380 NM_024535 79585 Hs.437957 NM_024535 HPRD:07975 CORO7 0610011B16Rik|CRN7|POD1 coronin 7 protein-coding 0.010695 0.446809 561_WT_peak_2334 chr14 91712640 91712810 + 51 NA intron (NM_003485, intron 1 of 1) intron (NM_003485, intron 1 of 1) -1873 NM_001177676 8111 Hs.8882 NM_003485 HPRD:03241 GPR68 GPR12A|OGR1 G protein-coupled receptor 68 protein-coding 0.029412 0.625731 561_WT_peak_1834 chr12 104697701 104697911 + 51 NA exon (NM_001008394, exon 1 of 1) exon (NM_001008394, exon 1 of 1) 296 NM_001008394 493861 Hs.659857 NM_001008394 HPRD:17415 EID3 NS4EB|NSE4B|NSMCE4B EP300 interacting inhibitor of differentiation 3 protein-coding 0.085714 0.630332 -128(GCCGCGGG,+,0.00) -117(CTCCGACG,-,0.00),-93(GGCCGACG,-,0.00) 4(CAGAACCG,+,0.00) 561_WT_peak_4113 chr2 68289904 68290112 + 51 NA intron (NM_001190263, intron 1 of 5) intron (NM_001190263, intron 1 of 5) 151 NM_173177 10438 Hs.602900 NM_006333 C1D LRP1|SUN-CoR|SUNCOR|hC1D C1D nuclear receptor corepressor protein-coding 0.028846 0.516746 32(TCGACTCC,+,0.00) 29(CCTTCGACTCCA,-,0.00) -100(GCTACGCAGC,-,0.00) 561_WT_peak_6618 chr7 25019077 25019252 + 51 NA intron (NM_015550, intron 1 of 22) CpG 667 NM_015550 26031 Hs.520259 NM_015550 HPRD:09474 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding 0.131429 0.727273 -82(GCGCCTCCCCGC,+,0.00) -117(TTTACCAG,-,0.00) -26(GCGGCCCCTGCG,+,0.00) 561_WT_peak_7082 chr8 101443038 101443359 + 51 NA Intergenic Intergenic 48207 NR_039681 100616451 NR_039681 miRBase:MI0016822 MIR4471 - microRNA 4471 ncRNA 0.012461 0.434783 -11(TCTACCCG,-,0.00) 561_WT_peak_3329 chr17 67323502 67323758 + 51 NA promoter-TSS (NM_172232) promoter-TSS (NM_172232) -307 NM_172232 23461 Hs.731824 NM_018672 HPRD:09789 ABCA5 ABC13|EST90625 ATP-binding cassette, sub-family A (ABC1), member 5 protein-coding 0.062500 0.649805 -144(AGCCACTA,-,0.00) -56(CGGGCAAA,+,0.00) 561_WT_peak_5427 chr4 18023195 18023507 + 51 NA exon (NM_153686, exon 1 of 7) exon (NM_153686, exon 1 of 7) 132 NM_001166139 254251 Hs.446201 NM_153686 HPRD:10088 LCORL MLR1 ligand dependent nuclear receptor corepressor-like protein-coding 0.134615 0.712460 111(CCCGGAGGGGGG,-,0.00) -163(GGGCCCCGGCCC,+,0.00),72(GGGCGCGAGCCC,+,0.00),85(CGGCGCGAGCCC,+,0.00),99(GAGCGCGCGCCC,+,0.00) 59(AGGCACGA,-,0.00),85(CGGCGCGA,-,0.00) -33(CGGCAGCAGCGG,+,0.00) -76(GCCGCGCA,+,0.00) -49(GCGGCGGCGGCG,+,0.00),-46(GCGGCGGCGGCG,+,0.00),-43(GCGGCGGCGGCG,+,0.00),-22(GCGGCGGCAGCG,+,0.00) 561_WT_peak_1145 chr10 112327430 112327707 + 51 NA 5' UTR (NM_005445, exon 1 of 29) 5' UTR (NM_005445, exon 1 of 29) 119 NM_005445 9126 Hs.24485 NM_005445 HPRD:05829 SMC3 BAM|BMH|CDLS3|CSPG6|HCAP|SMC3L1 structural maintenance of chromosomes 3 protein-coding 0.083032 0.690647 -31(GGGCCCGGAATC,+,0.00) -101(CGCGTAGG,+,0.00),-99(CGTAGGCG,-,0.00) 2(CCTTCGCGTCCC,-,0.00) 37(GGGCCGCTCC,+,0.00) 561_WT_peak_531 chr1 152020939 152020969 + 51 NA Intergenic Intergenic -11443 NM_005620 6282 Hs.417004 NM_005620 HPRD:04385 S100A11 HEL-S-43|MLN70|S100C S100 calcium binding protein A11 protein-coding 0.000000 0.419355 561_WT_peak_1991 chr13 34253203 34253407 + 51 NA Intergenic Intergenic -2333 NM_001243476 90627 Hs.156551 NM_052851 HPRD:11607 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR-related lipid transfer (START) domain containing 13 protein-coding 0.009804 0.390244 19(GGGAACCGAGGG,+,0.00) 561_WT_peak_1148 chr10 114206649 114206868 + 51 NA promoter-TSS (NM_145206) promoter-TSS (NM_145206) 2 NM_145206 143187 Hs.194554 NM_145206 HPRD:18290 VTI1A MMDS3|MVti1|VTI1RP2|Vti1-rp2 vesicle transport through interaction with t-SNAREs 1A protein-coding 0.063927 0.586364 -32(AGCCGATT,-,0.00),-2(AAACGCTT,-,0.00) -92(TCGCCGCC,+,0.00) -140(CCCGCTCAGGCC,+,0.00) -125(TGCGCAGT,-,0.00) 561_WT_peak_5010 chr3 13053088 13053258 + 51 NA intron (NM_001134382, intron 1 of 14) intron (NM_001134382, intron 1 of 14) -43975 NM_014869 9922 Hs.475506 NM_014869 HPRD:11052 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding 0.023529 0.543860 -84(AGGTGGCT,+,0.00) -120(CGGCACCA,-,0.00) -124(AACTCGGCAC,-,0.00) 561_WT_peak_1501 chr11 118215154 118215387 + 51 NA intron (NM_000073, intron 1 of 6) intron (NM_000073, intron 1 of 6) 211 NM_000073 917 Hs.2259 NM_000073 CD3G CD3-GAMMA|IMD17|T3G CD3g molecule, gamma (CD3-TCR complex) protein-coding 0.000000 0.508547 561_WT_peak_4960 chr22 44351351 44351585 + 51 NA exon (NM_015380, exon 1 of 15) exon (NM_015380, exon 1 of 15) 207 NM_015380 25813 Hs.505824 NM_015380 HPRD:10826 SAMM50 OMP85|SAM50|TOB55|TRG-3|YNL026W SAMM50 sorting and assembly machinery component protein-coding 0.098291 0.727660 -7(AGGCCTCT,+,0.00) 22(GCCGCGGG,+,0.00) -15(GGGCTGCGAGGC,-,0.00) -39(CGGGTAAG,+,0.00) -139(CGCGGACCCGCC,+,0.00) -13(GCTGCGAGGC,+,0.00) 561_WT_peak_1512 chr11 122932625 122932957 + 51 NA 5' UTR (NM_006597, exon 1 of 9) 5' UTR (NM_006597, exon 1 of 9) 252 NM_006597 3312 Hs.180414 NM_006597 HPRD:07205 HSPA8 HEL-33|HEL-S-72p|HSC54|HSC70|HSC71|HSP71|HSP73|HSPA10|LAP-1|LAP1|NIP71 heat shock 70kDa protein 8 protein-coding 0.048193 0.594595 154(TAGACGCC,+,0.00) 114(GCCCGCCCCT,+,0.00) 158(CGCCCGGC,-,0.00) -22(TTTACCTG,-,0.00) 561_WT_peak_448 chr1 145589431 145589617 + 51 NA promoter-TSS (NM_001012758) promoter-TSS (NM_001012758) -89 NM_001012758 200035 Hs.585066 NM_001012758 NUDT17 - nudix (nucleoside diphosphate linked moiety X)-type motif 17 protein-coding 0.069892 0.561497 -141(CGCCTGGCGCCC,-,0.00) -61(CGGGGAAA,+,0.00) -147(GCGGCCCGCCTG,+,0.00) 561_WT_peak_6259 chr6 30294235 30294417 + 51 NA promoter-TSS (NM_021253) promoter-TSS (NM_021253) -295 NM_021253 56658 Hs.413493 NM_021253 HPRD:09298 TRIM39 RNF23|TFP|TRIM39B tripartite motif containing 39 protein-coding 0.093407 0.721311 -8(GGGCGCCAGTCC,+,0.00) -105(GCCCCGCCCT,+,0.00) -110(CCCCCGCC,-,0.00) -110(CCCCCGCCCCGC,-,0.00) -67(GCGGCGGCGC,+,0.00) 561_WT_peak_5452 chr4 39978800 39979076 + 51 NA intron (NM_001100400, intron 1 of 15) CpG 638 NM_001100400 23244 Hs.331431 NM_015200 HPRD:11537 PDS5A SCC-112|SCC112 PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) protein-coding 0.094203 0.729242 -148(CCGCCCTCCACC,+,0.00) -119(AAGCGGCT,+,0.00) 5(TCGGGCGG,-,0.00) -44(CCCCCGGC,-,0.00),30(CCCGCGGC,-,0.00) -140(CACCCTCAGCCC,+,0.00) 23(CCTCGGAC,+,0.00) -109(CGCGCCTCCGCA,-,0.00),24(CTCGGACCCGCG,+,0.00) 89(GAGCCGAGCCGC,-,0.00) 561_WT_peak_4138 chr2 71295453 71295695 + 51 NA 5' UTR (NM_017567, exon 1 of 10) 5' UTR (NM_017567, exon 1 of 10) 166 NM_017567 55577 Hs.7036 NM_017567 HPRD:08441 NAGK GNK|HSA242910 N-acetylglucosamine kinase protein-coding 0.070248 0.641975 62(CGCACGCG,-,0.00) -128(CCGACCGA,+,0.00),-124(CCGACCTA,+,0.00) -130(GTCCGACC,-,0.00) 52(CCCGCGCA,+,0.00) -40(GCTGCGGACC,+,0.00) 561_WT_peak_193 chr1 40505315 40505496 + 51 NA promoter-TSS (NM_006367) promoter-TSS (NM_006367) -850 NM_001105530 10487 Hs.370581 NM_006367 HPRD:09869 CAP1 CAP|CAP1-PEN CAP, adenylate cyclase-associated protein 1 (yeast) protein-coding 0.066298 0.554945 -61(TCCCGGCCCA,+,0.00) 10(CCGAGTAG,-,0.00) 561_WT_peak_6035 chr5 176874150 176874357 + 51 NA intron (NM_001174101, intron 1 of 2) CpG 457 NM_001174101 80758 Hs.534492 NM_030567 HPRD:15186 PRR7 - proline rich 7 (synaptic) protein-coding 0.115942 0.774038 -48(CCCCCCTCCCCC,+,0.00) -145(AGCCGCCA,-,0.00) -47(CCCCCTCCCCCG,+,0.00) -74(GGCGGCGA,-,0.00),-70(GCGACGCC,+,0.00) 8(GGCGGGGG,+,0.00) 3(TGCGCGGC,-,0.00) 26(CTCTGGCCCGGC,-,0.00) -37(CGACGCGG,+,0.00) -73(GCGGCGACGC,+,0.00) 561_WT_peak_1241 chr11 33060639 33060811 + 51 NA promoter-TSS (NM_018393) promoter-TSS (NM_018393) -238 NM_018393 55346 Hs.655341 NM_018393 HPRD:07750 TCP11L1 dJ85M6.3 t-complex 11, testis-specific-like 1 protein-coding 0.098837 0.618497 -8(AGGGGCGGGC,-,0.00) 561_WT_peak_2531 chr15 67834600 67834770 + 51 NA promoter-TSS (NM_002757) promoter-TSS (NM_002757) -336 NM_002757 5607 Hs.114198 NM_002757 HPRD:03951 MAP2K5 HsT17454|MAPKK5|MEK5|PRKMK5 mitogen-activated protein kinase kinase 5 protein-coding 0.035294 0.473684 -130(GAGCTGCAGCCC,+,0.00) -43(TTTACCCT,-,0.00) 561_WT_peak_4967 chr22 48494166 48494355 + 51 NA Intergenic Intergenic -175916 NR_036172 100422916 NR_036172 miRBase:MI0014250 MIR3201 - microRNA 3201 ncRNA 0.010582 0.394737 561_WT_peak_7314 chr9 82185342 82185589 + 51 NA Intergenic Intergenic -1223 NM_001282753 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|ESG|ESG4|GRG4 transducin-like enhancer of split 4 protein-coding 0.044534 0.620968 48(CGGGAAAA,+,0.00) -88(AGCCATGGCTGC,-,0.00) 561_WT_peak_4141 chr2 71559246 71559442 + 51 NA intron (NM_001252613, intron 1 of 27) CpG 459 NM_001014972 27332 Hs.434401 NM_014497 HPRD:11736 ZNF638 NP220|ZFML|Zfp638 zinc finger protein 638 protein-coding 0.096939 0.695431 -47(CGCCCGGC,-,0.00) -70(CGAGGCGG,+,0.00) -73(GGCCGAGGCGGC,-,0.00) 561_WT_peak_3735 chr19 36485927 36486108 + 51 NA promoter-TSS (NM_001042631) promoter-TSS (NM_001042631) -73 NM_001042631 644096 Hs.356460 NM_001042631 ENSG00000205138 SDHAF1 LYRM8 succinate dehydrogenase complex assembly factor 1 protein-coding 0.093923 0.664835 -9(AAGTGGCT,+,0.00) -73(GTCAGACG,-,0.00) -124(GACTCCGCCC,-,0.00) 561_WT_peak_6970 chr8 30515066 30515282 + 51 NA intron (NM_002095, intron 1 of 7) CpG 564 NM_002095 2961 Hs.77100 NM_002095 HPRD:01800 GTF2E2 FE|TF2E2|TFIIE-B general transcription factor IIE, polypeptide 2, beta 34kDa protein-coding 0.055556 0.525346 -106(CGCGTATG,+,0.00) -61(CCCGCGGC,-,0.00) -22(ACCGCGCC,+,0.00) 13(CAGTCAGGCGGC,-,0.00) 561_WT_peak_1855 chr12 111020537 111020820 + 51 NA exon (NM_139283, exon 1 of 6) exon (NM_139283, exon 1 of 6) 386 NM_139283 160760 Hs.13854 NM_139283 PPTC7 TA-PP2C|TAPP2C PTC7 protein phosphatase homolog (S. cerevisiae) protein-coding 0.155477 0.753521 81(GGCCGCCGAG,+,0.00) -138(CCCGGGAGGCGG,-,0.00) 38(TCGCCGCC,+,0.00) -81(CGTCCGCG,-,0.00),112(CCCGTACG,+,0.00) 68(TCGGTCTG,-,0.00) 39(CGCCGCCGCCGC,-,0.00),42(CGCCGCCGCCGC,-,0.00),45(CGCCGCCGCCGC,-,0.00),54(CGCCGGCCCTGG,-,0.00) 561_WT_peak_4065 chr2 48571313 48571503 + 51 NA intron (NM_002158, intron 2 of 6) intron (NM_002158, intron 2 of 6) 29613 NM_002158 3344 Hs.468478 NM_002158 HPRD:00882 FOXN2 HTLF forkhead box N2 protein-coding 0.010526 0.335079 -81(CAAATCCG,+,0.00) -92(GAAACAGAAACC,+,0.00) 561_WT_peak_4314 chr2 136500001 136500110 + 51 NA intron (NM_014607, intron 1 of 12) CpG 866 NM_014607 23190 Hs.591242 NM_014607 HPRD:18254 UBXN4 UBXD2|UBXDC1|erasin UBX domain protein 4 protein-coding 0.100917 0.754545 -128(TCGTCGCC,+,0.00) -143(GCCGCCCA,+,0.00),-106(TGCGCAGC,-,0.00) -102(CAGCCAGACCCC,-,0.00) 561_WT_peak_1762 chr12 69754221 69754244 + 51 NA intron (NM_001300950, intron 1 of 4) intron (NM_001300950, intron 1 of 4) 742 NM_006530 8089 Hs.4029 NM_006530 HPRD:03666 YEATS4 4930573H17Rik|B230215M10Rik|GAS41|NUBI-1|YAF9 YEATS domain containing 4 protein-coding 0.043478 0.500000 561_WT_peak_4480-2 chr2 222382906 222383203 + 51 NA intron (NM_004438, intron 3 of 17) intron (NM_004438, intron 3 of 17) 53956 NM_004438 2043 Hs.371218 NM_004438 HPRD:03719 EPHA4 HEK8|SEK|TYRO1 EPH receptor A4 protein-coding 0.010101 0.476510 -5(TTTACCCG,-,0.00) -72(GAAACAAGAATC,+,0.00) 561_WT_peak_5003 chr3 11684055 11684230 + 51 NA intron (NM_014667, intron 2 of 5) intron (NM_014667, intron 2 of 5) 1309 NM_001128219 9686 Hs.740389 NM_014667 HPRD:11672 VGLL4 VGL-4 vestigial-like family member 4 protein-coding 0.057143 0.517045 -106(GTCCGAGG,-,0.00) 561_WT_peak_6471 chr6 131018913 131019204 + 51 NA Intergenic Intergenic -129487 NM_001195597 100507203 Hs.388715 NM_001195597 ENSG00000256162 SMLR1 - small leucine-rich protein 1 protein-coding 0.003436 0.380137 561_WT_peak_6019 chr5 172192132 172192279 + 51 NA Intergenic Intergenic 5998 NM_004417 1843 Hs.171695 NM_004417 HPRD:02835 DUSP1 CL100|HVH1|MKP-1|MKP1|PTPN10 dual specificity phosphatase 1 protein-coding 0.027211 0.621622 -125(AGACACCT,-,0.00) -115(TCGGTGGG,-,0.00) 561_WT_peak_3913 chr19 57832170 57832365 + 51 NA intron (NM_213598, intron 1 of 3) intron (NM_213598, intron 1 of 3) 402 NM_213598 125919 Hs.202544 NM_213598 HPRD:15829 ZNF543 - zinc finger protein 543 protein-coding 0.066667 0.617347 -83(AGGTTTTG,-,0.00) -144(CCCGGGCCCCGC,-,0.00) -161(GGCTGAGCCGCG,+,0.00) 561_WT_peak_6968 chr8 29952202 29952342 + 51 NA promoter-TSS (NM_001128208) promoter-TSS (NM_001128208) -650 NM_001128208 23484 Hs.146585 NM_015344 HPRD:09551 LEPROTL1 HSPC112|Vps55|my047 leptin receptor overlapping transcript-like 1 protein-coding 0.028571 0.496454 561_WT_peak_4652 chr20 45317893 45318144 + 51 NA exon (NM_033550, exon 1 of 2) exon (NM_033550, exon 1 of 2) 258 NM_033550 112858 Hs.440263 NM_033550 HPRD:12276 TP53RK BUD32|C20orf64|Nori-2|Nori-2p|PRPK|dJ101A2 TP53 regulating kinase protein-coding 0.111554 0.678571 -59(GCCTCCGGGGCG,-,0.00) -110(AGGCCGCT,+,0.00),-98(AAGCGGCT,+,0.00) -35(TCGGCCGG,-,0.00),17(CCAACCGA,+,0.00) 52(GCTTCGGCTCGC,-,0.00) -11(GCCGCCATGACT,+,0.00) 561_WT_peak_1231 chr11 20408805 20408975 + 51 NA promoter-TSS (NM_001145167) promoter-TSS (NM_001145167) -186 NM_001145166 10196 Hs.152337 NM_005788 HPRD:11934 PRMT3 HRMT1L3 protein arginine methyltransferase 3 protein-coding 0.076471 0.631579 -91(CAGCGACG,-,0.00) -99(CAAAACCG,+,0.00) 561_WT_peak_305 chr1 86862030 86862221 + 51 NA promoter-TSS (NM_020729) promoter-TSS (NM_020729) -100 NM_001184765 57489 Hs.149360 NM_020729 HPRD:11134 ODF2L dJ977L11.1 outer dense fiber of sperm tails 2-like protein-coding 0.068063 0.526042 -25(AAGCGTTT,+,0.00) -128(TAGGGACG,-,0.00) -81(GGGCAGGGAGGG,-,0.00) -44(CGGGTAAA,+,0.00) 561_WT_peak_821 chr1 244211344 244211545 + 50 NA promoter-TSS (NM_001278196) promoter-TSS (NM_001278196) -797 NM_001278196 10472 Hs.69997 NM_006352 HPRD:12231 ZBTB18 C2H2-171|MRD22|RP58|TAZ-1|ZNF238 zinc finger and BTB domain containing 18 protein-coding 0.094527 0.663366 -53(TCGCCGCC,+,0.00) -70(CCCTCCCAGCGC,+,0.00) -100(TGCGCGGG,-,0.00) -117(GCTCCGCACC,-,0.00) 561_WT_peak_2098 chr13 111365643 111365950 + 50 NA 5' UTR (NM_198219, exon 1 of 2) 5' UTR (NM_198219, exon 1 of 2) 186 NM_198219 3621 Hs.46700 NM_005537 HPRD:03337 ING1 p24ING1c|p33|p33ING1|p33ING1b|p47|p47ING1a inhibitor of growth family, member 1 protein-coding 0.087948 0.678571 -6(CTCGCCCGCC,-,0.00) -96(AGGCCGCT,+,0.00) -136(CCCGCGGC,-,0.00) -60(GCCGCCCA,+,0.00) 108(GCCCCCAGGGCC,+,0.00) 561_WT_peak_3662 chr19 15529394 15529564 + 50 NA intron (NR_111971, intron 1 of 15) CpG 453 NR_111971 26993 Hs.399800 NM_014371 HPRD:10641 AKAP8L HA95|HAP95|NAKAP|NAKAP95 A kinase (PRKA) anchor protein 8-like protein-coding 0.100000 0.701754 -54(GGCGGCCGGG,+,0.00) -42(CCGGGACGCCGG,-,0.00) -161(GGCGTCGA,-,0.00) -140(AGGCCAGGGA,-,0.00) 561_WT_peak_2585 chr15 85258943 85259224 + 50 NA intron (NM_001271918, intron 1 of 6) CpG 608 NM_001271918 23478 Hs.9534 NM_014300 HPRD:07503 SEC11A 1810012E07Rik|SEC11L1|SPC18|SPCS4A|sid2895 SEC11 homolog A (S. cerevisiae) protein-coding 0.060498 0.588652 -63(CCCCGCCCCCGG,+,0.00) -130(CGCGTACG,+,0.00) 75(GTCCGCCG,-,0.00) 79(GCCGGGCCCCGC,-,0.00) -13(GGACAAGGCGGC,-,0.00) 84(GCCCCGCAGC,-,0.00) 77(CCGCCGGGCCCC,-,0.00) 561_WT_peak_4261 chr2 112945778 112946012 + 50 NA TTS (NM_001128165) TTS (NM_001128165) 49933 NM_153214 129804 Hs.437696 NM_153214 HPRD:08783 FBLN7 TM14 fibulin 7 protein-coding 0.008547 0.476596 561_WT_peak_6621 chr7 25068372 25068547 + 50 NA Intergenic Intergenic -48628 NM_015550 26031 Hs.520259 NM_015550 HPRD:09474 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding 0.005714 0.403409 -19(GGGCTGAGATGT,-,0.00) 561_WT_peak_2973 chr17 1626415 1626597 + 50 NA intron (NM_001163673, intron 1 of 9) intron (NM_001163673, intron 1 of 9) -1328 NM_001163811 124997 Hs.234572 NM_152348 HPRD:08748 WDR81 CAMRQ2|PPP1R166 WD repeat domain 81 protein-coding 0.016484 0.546448 -108(TGGTGCCG,+,0.00) 561_WT_peak_3655 chr19 14493082 14493305 + 50 NA intron (NM_001025160, intron 1 of 18) MIR|SINE|MIR 1237 NM_001784 976 Hs.466039 NM_001784 HPRD:03130 CD97 TM7LN1 CD97 molecule protein-coding 0.022422 0.584821 -37(TCCACGCC,+,0.00) -134(CCCGCCTTGGCT,+,0.00) 561_WT_peak_5802 chr5 70897416 70897772 + 50 NA intron (NM_022132, intron 4 of 16) intron (NM_022132, intron 4 of 16) 14479 NM_022132 64087 Hs.604789 NM_022132 HPRD:01952 MCCC2 MCCB methylcrotonoyl-CoA carboxylase 2 (beta) protein-coding 0.005618 0.420168 123(TGGTTTTG,-,0.00) 561_WT_peak_2655 chr16 2205094 2205273 + 50 NA promoter-TSS (NR_002736) promoter-TSS (NR_002736) -77 NR_002736 26788 NR_002736 ENSG00000206630 SNORD60 RNU60|U60 small nucleolar RNA, C/D box 60 snoRNA 0.050279 0.600000 -37(TGGACGCC,+,0.00) -4(TCGGACGG,-,0.00) -132(AGCCCGGCCC,-,0.00) 561_WT_peak_3644 chr19 13278417 13278622 + 50 NA Intergenic Intergenic 17237 NM_004907 9592 Hs.501629 NM_004907 HPRD:09997 IER2 ETR101 immediate early response 2 protein-coding 0.034146 0.694175 -81(GGGCCGGGGCCC,-,0.00) -137(GGGCAGGGAGGG,-,0.00) -113(CCGCCTAG,-,0.00) 561_WT_peak_2395 chr14 106626956 106627153 + 50 NA Intergenic Intergenic -117215 NR_033375 338004 Hs.569411 NR_033375 ENSG00000229084 LINC00226 C14orf97|NCRNA00226 long intergenic non-protein coding RNA 226 ncRNA 0.040609 0.671717 561_WT_peak_1407 chr11 73077442 73077621 + 50 NA intron (NM_014786, intron 20 of 20) AluJb|SINE|Alu -9874 NM_152222 84957 Hs.533720 NM_032871 HPRD:15544 RELT TNFRSF19L|TRLT RELT tumor necrosis factor receptor protein-coding 0.022346 0.527778 -109(GGCGCGGT,-,0.00) 561_WT_peak_5366 chr3 195681219 195681543 + 50 NA Intergenic CpG 35769 NR_003264 255812 Hs.566872 NR_003264 ENSG00000185485 SDHAP1 SDHAL1|SDHALP1 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1 pseudo 0.120370 0.747692 -35(GGCGGCCAAG,+,0.00) 140(CCGGGAAGGCGC,-,0.00) 1(CGCGTGCG,+,0.00) 136(GGGGCCGGGA,-,0.00) 39(CCGCCTCTGCCG,-,0.00),69(CCGCCGCTTCCG,-,0.00) -86(GCCGCGCC,+,0.00),-63(GCCGCCCA,+,0.00) 134(GCGGGGCCGGGA,+,0.00) 133(CGCGGGGCCGGG,+,0.00) -70(GCCCAGGGCCGC,-,0.00),-25(GGCCAAGGCGCG,-,0.00) -14(GCGGCTGGGCTG,+,0.00) 561_WT_peak_3088 chr17 26662510 26662693 + 50 NA promoter-TSS (NM_021137) promoter-TSS (NM_021137) 53 NM_021137 7126 Hs.76090 NM_021137 HPRD:01856 TNFAIP1 B12|B61|BTBD34|EDP1|hBACURD2 tumor necrosis factor, alpha-induced protein 1 (endothelial) protein-coding 0.060109 0.641304 -62(CCGGCAAGGCGG,-,0.00) -67(TAGCGCCG,-,0.00) -29(CCGCGAAG,-,0.00) -61(CGGCAAGGCGGC,-,0.00) 561_WT_peak_7063 chr8 87520500 87521004 + 50 NA exon (NM_016033, exon 1 of 10) exon (NM_016033, exon 1 of 10) 257 NM_001286719 51115 Hs.145386 NM_016033 HPRD:13042 RMDN1 FAM82B|RMD-1|RMD1 regulator of microtubule dynamics 1 protein-coding 0.075397 0.647525 231(GGAGGCGGGCGG,-,0.00),281(CCGCCCGCCTCC,+,0.00) 0(GGAGCCGGAACC,+,0.00),97(CTGCCCGAAGTC,+,0.00) 58(TCGAAGCC,+,0.00) 275(CCGCGCCCGCCC,+,0.00) 90(CCCGCGGC,-,0.00) 142(CGTCGGAA,+,0.00) 274(ACCGCGCC,+,0.00) -29(CGCGGGGCCGCC,+,0.00),57(CTCGAAGCCGCG,+,0.00),92(CGCGGCTGCCCG,-,0.00),132(GGCGGCTCCACG,-,0.00) 237(GGGCGGGGCT,+,0.00) 81(GCCGCAATGCCC,+,0.00) 561_WT_peak_4233 chr2 99797460 99797677 + 50 NA promoter-TSS (NR_028356) promoter-TSS (NR_028356) 26 NR_028356 51263 Hs.346736 NM_016503 HPRD:14751 MRPL30 L28MT|L30MT|MRP-L28|MRP-L30|MRPL28|MRPL28M|RPML28 mitochondrial ribosomal protein L30 protein-coding 0.059908 0.577982 561_WT_peak_628 chr1 173836896 173837124 + 50 NA promoter-TSS (NR_003941) promoter-TSS (NR_003941) 115 NR_002578 60674 Hs.531856 NR_002578 ENSG00000234741 GAS5 NCRNA00030|SNHG2 growth arrest-specific 5 (non-protein coding) ncRNA 0.048246 0.528384 44(GGAGTCGA,-,0.00),48(TCGACTCC,+,0.00) 4(CAAAACCC,+,0.00) 561_WT_peak_3138 chr17 35078372 35078382 + 50 NA Intergenic Intergenic 120352 NM_024864 79922 Hs.194864 NM_024864 HPRD:08656 MRM1 - mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) protein-coding 0.000000 0.545455 561_WT_peak_365 chr1 110448763 110448852 + 50 NA Intergenic Intergenic -4426 NM_000757 1435 Hs.173894 NM_000757 HPRD:00388 CSF1 CSF-1|MCSF colony stimulating factor 1 (macrophage) protein-coding 0.000000 0.544444 561_WT_peak_3806 chr19 46010569 46010790 + 50 NA promoter-TSS (NM_003370) promoter-TSS (NM_003370) -9 NM_003370 7408 Hs.515469 NM_003370 HPRD:03415 VASP - vasodilator-stimulated phosphoprotein protein-coding 0.081448 0.608108 26(AGCCGCCA,-,0.00) -75(CGCACGCG,-,0.00) -132(GGAAGCCGAGGG,+,0.00) 45(TGCGCGCT,-,0.00) -73(CACGCGGCCC,-,0.00) 561_WT_peak_1072 chr10 81077692 81077848 + 50 NA Intergenic Intergenic -29450 NM_005729 10105 Hs.381072 NM_005729 HPRD:06839 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding 0.006410 0.573248 -163(CAGGGAGGGAGG,-,0.00) 561_WT_peak_2329 chr14 90865933 90866125 + 50 NA intron (NM_006888, intron 1 of 5) AmnSINE1|SINE|Deu 2702 NM_006888 801 Hs.282410 NM_006888 HPRD:00241 CALM1 CALML2|CAMI|CPVT4|DD132|PHKD|caM calmodulin 1 (phosphorylase kinase, delta) protein-coding 0.015625 0.590674 561_WT_peak_4987 chr3 4887555 4887604 + 50 NA intron (NM_001168272, intron 60 of 60) intron (NM_001168272, intron 60 of 60) -52331 NR_037903 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA 0.000000 0.300000 561_WT_peak_5712 chr5 41904484 41904743 + 50 NA intron (NM_175921, intron 1 of 5) CpG 143 NM_175921 285636 Hs.29899 NM_175921 HPRD:11258 C5orf51 - chromosome 5 open reading frame 51 protein-coding 0.061776 0.634615 -68(GGAGGAGAGGGA,-,0.00),-59(GGAGGCGGGCGG,-,0.00) -101(TAGCGAAG,-,0.00),-41(CGGCGCTA,+,0.00) -17(TGGCTGTGAGGG,-,0.00) 40(GTTACCCG,-,0.00) 16(CCTTTGGGTCCC,-,0.00) 561_WT_peak_2108 chr13 114908189 114908360 + 50 NA Intergenic Intergenic -10179 NM_007368 22821 Hs.593075 NM_007368 HPRD:05537 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding 0.035088 0.575581 -117(GCCCTGCCCT,+,0.00) -124(TTTACCAG,-,0.00) 561_WT_peak_4821 chr21 47878087 47878717 + 50 NA promoter-TSS (NM_206891) promoter-TSS (NM_206891) -460 NM_206890 23181 Hs.189585 NM_015151 HPRD:07611 DIP2A C21orf106|DIP2 DIP2 disco-interacting protein 2 homolog A (Drosophila) protein-coding 0.101587 0.686212 415(AGCGGCAT,-,0.00) -36(CCGTCCTCCCGC,+,0.00) 100(TCGACGCC,+,0.00),418(GGCATCGA,-,0.00),422(TCGACGCG,+,0.00) 124(CGTTCGCG,-,0.00),166(CGCGGACG,+,0.00),168(CGGACGCG,-,0.00) 82(AGGCACGA,-,0.00),305(TCGGGCCG,+,0.00) -68(CCCTCTCAGTCT,+,0.00) -123(CGTCAGAC,+,0.00),-5(GTCCGACA,-,0.00) 75(CAGGTAAA,+,0.00) 115(ACTGCGCA,+,0.00),117(TGCGCAGC,-,0.00) -152(CTCAGGCCCCGC,-,0.00),-79(CGCCGGCGGCGC,-,0.00),236(GCGGGGCCACCA,+,0.00),353(GCAGGCCCAGCG,+,0.00) 210(GGGCGGGGCT,+,0.00) 172(CGCGCCATGGCG,+,0.00),174(CGCCATGGCGCG,-,0.00) -52(CCGCCAGGCCCC,-,0.00),321(CAGCCTGCCCGC,-,0.00) 561_WT_peak_1487 chr11 114030834 114031010 + 50 NA intron (NM_001018011, intron 3 of 6) intron (NM_001018011, intron 3 of 6) 99634 NM_001018011 7704 Hs.591945 NM_006006 HPRD:11762 ZBTB16 PLZF|ZNF145 zinc finger and BTB domain containing 16 protein-coding 0.011364 0.514124 -91(GCTGCGAGCC,+,0.00) -99(CAGGCCTGGCTG,+,0.00) 561_WT_peak_4856 chr22 24255968 24256274 + 50 NA Intergenic CpG -15004 NR_038911 284889 Hs.632772 NR_038911 MIF-AS1 - MIF antisense RNA 1 ncRNA 0.078431 0.661238 -86(TCCCGCCCCT,+,0.00) -84(CCGCCCCTTCCC,-,0.00) -89(TTTTCCCG,-,0.00) -74(CCTGCAGCTCCC,-,0.00) 123(GCGGGGGCGGGG,+,0.00) 73(GGGCGGGGTT,+,0.00),127(GGGCGGGGCT,+,0.00) 561_WT_peak_4633 chr20 37433757 37433945 + 50 NA promoter-TSS (NM_001172735) promoter-TSS (NM_001172735) -497 NM_015568 26051 Hs.45719 NM_015568 HPRD:15168 PPP1R16B ANKRD4|TIMAP protein phosphatase 1, regulatory subunit 16B protein-coding 0.042553 0.661376 11(GCCGCGCA,+,0.00) -34(GGCCAGGGCCGG,-,0.00) 561_WT_peak_4606 chr20 33104484 33104594 + 50 NA intron (NM_001281727, intron 1 of 3) CpG 350 NM_001281728 83658 Hs.593920 NM_014183 HPRD:06203 DYNLRB1 BITH|BLP|DNCL2A|DNLC2A|ROBLD1 dynein, light chain, roadblock-type 1 protein-coding 0.072727 0.693694 -113(TGGGCGGC,-,0.00) 561_WT_peak_2840 chr16 50298108 50298237 + 50 NA Intergenic L1ME3|LINE|L1 -2279 NM_001286057 113 Hs.513578 NM_001114 HPRD:02663 ADCY7 AC7 adenylate cyclase 7 protein-coding 0.007752 0.392308 561_WT_peak_1615 chr12 12966150 12966524 + 50 NA promoter-TSS (NM_016355) promoter-TSS (NM_016355) 57 NM_201224 51202 Hs.719938 NM_016355 HPRD:10863 DDX47 E4-DBP|HQ0256|MSTP162|RRP3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 protein-coding 0.061497 0.568000 31(AGCCGATT,-,0.00) 15(CCGACCGA,+,0.00) 24(GCGTCCCAGC,-,0.00) 561_WT_peak_1216 chr11 14521269 14521468 + 50 NA promoter-TSS (NM_016451) promoter-TSS (NM_016451) 36 NM_016451 1315 Hs.339278 NM_016451 HPRD:02981 COPB1 COPB coatomer protein complex, subunit beta 1 protein-coding 0.085427 0.665000 1(AGCCACCT,-,0.00) -13(ACGACCGA,+,0.00) -64(GCGGCGGCGGCG,+,0.00) 561_WT_peak_1303 chr11 60673962 60674177 + 50 NA promoter-TSS (NM_014502) promoter-TSS (NM_014502) -8 NM_014502 27339 Hs.502705 NM_014502 HPRD:12214 PRPF19 NMP200|PRP19|PSO4|SNEV|UBOX4|hPSO4 pre-mRNA processing factor 19 protein-coding 0.106977 0.638889 -155(AGCCGCCA,-,0.00) 36(GGCGTCGG,-,0.00) -146(CCGAGCGA,+,0.00) -32(CGCCACGA,-,0.00),5(TCGTTCCG,+,0.00) -33(CCGCCACG,-,0.00) 561_WT_peak_3244 chr17 48556011 48556232 + 50 NA promoter-TSS (NM_018346) promoter-TSS (NM_018346) -69 NM_018346 55316 Hs.8033 NM_018346 HPRD:07737 RSAD1 - radical S-adenosyl methionine domain containing 1 protein-coding 0.131222 0.747748 -76(CGCCCGGC,-,0.00) 1(GCTGCGCA,+,0.00) -4(CGCCGGCTGCGC,-,0.00) -129(CCGCCTCG,-,0.00) -127(GCCTCGCGGC,-,0.00),-63(GCGCCGCAGC,-,0.00) 561_WT_peak_1873 chr12 117362375 117362653 + 50 NA intron (NM_153348, intron 1 of 10) intron (NM_153348, intron 1 of 10) 13753 NM_012174 26259 Hs.624537 NM_012174 HPRD:16427 FBXW8 FBW6|FBW8|FBX29|FBXO29|FBXW6 F-box and WD repeat domain containing 8 protein-coding 0.003597 0.408602 3(ATGTGGCT,+,0.00) 561_WT_peak_6102 chr6 12011430 12011643 + 50 NA Intergenic Intergenic -1188 NM_002114 3096 Hs.567284 NM_002114 HPRD:01925 HIVEP1 CIRIP|CRYBP1|GAAP|MBP-1|PRDII-BF1|Schnurri-1|ZAS1|ZNF40|ZNF40A human immunodeficiency virus type I enhancer binding protein 1 protein-coding 0.065728 0.616822 -73(TCCCCCTCCCCC,+,0.00) -41(GGGGCCGGGA,-,0.00) -81(CCCCCGCC,-,0.00) -99(CCTTGGGGTCCC,-,0.00) -43(GCGGGGCCGGGA,+,0.00) 561_WT_peak_3664 chr19 15947280 15947472 + 50 NA TTS (NR_015379) TTS (NR_015379) 7619 NR_015379 652995 Hs.644234 NR_015379 ENSG00000214049 UCA1 CUDR|LINC00178|NCRNA00178|UCAT1 urothelial cancer associated 1 (non-protein coding) ncRNA 0.067708 0.720207 -122(AGACCCGGCTTC,+,0.00) -75(CCGCCTTCGGGG,+,0.00) -90(AGGGAGAAGCGG,+,0.00) -127(CGCGGAGACCCG,+,0.00) -78(GGGCCGCCTT,+,0.00) -37(GGCCATGGCTCC,-,0.00) 561_WT_peak_137 chr1 28157395 28157656 + 50 NA 5' UTR (NM_002713, exon 1 of 6) 5' UTR (NM_002713, exon 1 of 6) 200 NM_138558 5511 Hs.533474 NM_002713 HPRD:04028 PPP1R8 ARD-1|ARD1|NIPP-1|NIPP1|PRO2047 protein phosphatase 1, regulatory subunit 8 protein-coding 0.065134 0.622137 -15(CGGGCCGGGC,-,0.00) -12(GCCGGGCG,+,0.00) -107(GGGCTGGAAGGG,-,0.00) -71(GCGAGCCGAACG,+,0.00) -98(GGGCGGCTCT,+,0.00) -74(GCTGCGAGCC,+,0.00) 561_WT_peak_707 chr1 206990248 206990438 + 50 NA intron (NM_153758, intron 1 of 5) LTR45C|LTR|ERV1 -11879 NM_013371 29949 Hs.661017 NM_013371 HPRD:05747 IL19 IL-10C|MDA1|NG.1|ZMDA1 interleukin 19 protein-coding 0.005263 0.382199 561_WT_peak_2717 chr16 19567094 19567489 + 50 NA intron (NM_001300743, intron 1 of 27) CpG 554 NM_001300743 57020 Hs.654964 NM_020314 HPRD:14455 C16orf62 - chromosome 16 open reading frame 62 protein-coding 0.050633 0.580808 95(CCGCGTCCCCAG,+,0.00) -102(TCTGTCGG,-,0.00) -124(GGTCTGAGAGTG,-,0.00) 172(CGAGTCGG,+,0.00) 561_WT_peak_6553 chr6 170101979 170102149 + 50 NA promoter-TSS (NM_001202550) promoter-TSS (NM_001202550) 95 NM_182552 253769 Hs.131903 NM_182552 HPRD:11352 WDR27 - WD repeat domain 27 protein-coding 0.111765 0.707602 -30(AGCCGCTA,-,0.00) -42(CCGACCCA,+,0.00) -64(CGCCGCTA,+,0.00) 561_WT_peak_5500 chr4 73935625 73935854 + 50 NA promoter-TSS (NM_173827) promoter-TSS (NM_173827) -263 NM_001297733 285521 Hs.356697 NM_173827 HPRD:08249 COX18 COX18HS COX18 cytochrome C oxidase assembly factor protein-coding 0.030568 0.491304 -149(GTCCGAGG,-,0.00) -135(CAAAACTG,+,0.00),18(CGGTTTTT,-,0.00) 561_WT_peak_6951 chr8 27630039 27630282 + 50 NA promoter-TSS (NM_018246) promoter-TSS (NM_018246) 10 NM_018246 55246 Hs.445512 NM_018246 HPRD:07705 CCDC25 - coiled-coil domain containing 25 protein-coding 0.102881 0.622951 -31(CGGCGGAC,+,0.00) -117(CGCGGAGCAGCA,+,0.00) -64(CCGCCTGGCCCC,-,0.00) 561_WT_peak_881 chr10 8458321 8458552 + 50 NA Intergenic Intergenic -148168 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA 0.008658 0.375000 -144(TGGTTTTG,-,0.00) 561_WT_peak_917 chr10 25013224 25013640 + 50 NA promoter-TSS (NM_020824) promoter-TSS (NM_020824) -835 NM_020824 57584 Hs.524195 NM_020824 HPRD:06445 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding 0.062500 0.601918 105(AGGCGGCT,+,0.00) 189(TCCCGGGCCT,+,0.00) 160(CGGCACAA,-,0.00) -61(CGTGGGAC,+,0.00) 163(CACAACCG,+,0.00) 81(GGCGCGGC,-,0.00) 82(GCGCGGCTAGCG,+,0.00) 150(TCCGGAGCCGCG,+,0.00) 148(GCTCCGGAGC,+,0.00),148(GCTCCGGAGC,-,0.00) 561_WT_peak_3122 chr17 33415758 33415984 + 50 NA intron (NR_037713, intron 1 of 6) intron (NR_037713, intron 1 of 6) 477 NR_037713 117584 Hs.13680 NM_057178 HPRD:11489 RFFL CARP-2|CARP2|FRING|RIFIFYLIN|RNF189|RNF34L ring finger and FYVE-like domain containing E3 ubiquitin protein ligase protein-coding 0.035398 0.581498 -37(AAACGCTT,-,0.00) 8(CCCTGAAGGCGG,-,0.00) 561_WT_peak_1568 chr12 7070592 7070762 + 50 NA TTS (NM_002831) TTS (NM_002831) -2185 NR_029779 406985 NR_029779 miRBase:MI0000650 MIR200C MIRN200C microRNA 200c ncRNA 0.076471 0.578947 -154(TGGGTCGG,-,0.00) -142(CCGCCTCG,-,0.00) 561_WT_peak_4745 chr21 15755893 15756224 + 50 NA promoter-TSS (NM_006948) promoter-TSS (NM_006948) -549 NM_006948 6782 Hs.352341 NM_006948 HPRD:03061 HSPA13 STCH heat shock protein 70kDa family, member 13 protein-coding 0.051360 0.524096 -53(GAGCCCCAGCCA,+,0.00) -106(CGCGTTCG,+,0.00) -13(GCGGGGCCTGAG,+,0.00) 561_WT_peak_5228 chr3 121379539 121379677 + 50 NA intron (NM_005335, intron 1 of 13) intron (NM_005335, intron 1 of 13) 187 NM_001292041 3059 Hs.14601 NM_005335 HPRD:03199 HCLS1 CTTNL|HS1|lckBP1|p75 hematopoietic cell-specific Lyn substrate 1 protein-coding 0.000000 0.510791 561_WT_peak_3386 chr17 79479643 79479821 + 50 NA 5' UTR (NM_001199954, exon 1 of 6) 5' UTR (NM_001199954, exon 1 of 6) 160 NR_037688 71 Hs.514581 NM_001614 HPRD:00017 ACTG1 ACT|ACTG|BRWS2|DFNA20|DFNA26|HEL-176 actin, gamma 1 protein-coding 0.140449 0.748603 -151(CGGGGAAGGCGC,-,0.00) -117(GCGGGGCCAGCC,+,0.00),-73(CTCAGGCCCCGG,-,0.00) -30(GGCGGAGCGGCG,+,0.00) 561_WT_peak_1242 chr11 33182795 33183037 + 50 NA promoter-TSS (NR_034027) promoter-TSS (NR_034027) 121 NM_001033505 1479 Hs.44402 NM_001326 HPRD:02651 CSTF3 CSTF-77 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa protein-coding 0.049587 0.539095 -146(CGCCACGA,-,0.00) 46(ACCGCCCA,+,0.00) 20(GAGCCAGACCGC,-,0.00) 561_WT_peak_2906 chr16 74701070 74701245 + 50 NA promoter-TSS (NM_018124) promoter-TSS (NM_018124) -378 NM_018124 55159 Hs.567525 NM_018124 HPRD:07678 RFWD3 RNF201 ring finger and WD repeat domain 3 protein-coding 0.022857 0.346591 561_WT_peak_4392 chr2 190539337 190539586 + 50 NA Intergenic CpG -1250 NM_144708 150709 Hs.60772 NM_144708 ENSG00000151687 ANKAR - ankyrin and armadillo repeat containing protein-coding 0.096386 0.652000 -101(CCTTCCGGTGCG,-,0.00) -26(GGCGGCGA,-,0.00),-23(GGCGACGA,-,0.00) 9(CGCGGACG,+,0.00) -152(AGGGCCGGGC,-,0.00) -60(GGGCGGATTC,+,0.00) -143(CCGCCACG,-,0.00) -144(GCCGCCACGGTG,+,0.00) -151(GGGCCGGGCCGC,-,0.00) 561_WT_peak_3070 chr17 19188001 19188178 + 50 NA intron (NM_148921, intron 3 of 9) intron (NM_148921, intron 3 of 9) 13383 NR_046824 100874309 Hs.733657 NR_046824 EPN2-IT1 - EPN2 intronic transcript 1 (non-protein coding) ncRNA 0.016949 0.382022 561_WT_peak_923 chr10 27149935 27150138 + 50 NA promoter-TSS (NM_001178116) promoter-TSS (NM_001178116) -20 NM_001178121 10006 Hs.508148 NM_005470 HPRD:04336 ABI1 ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 abl-interactor 1 protein-coding 0.078818 0.588235 -144(CCCCCCTCCACC,+,0.00) -122(AGCCGCCT,-,0.00),18(AGACACCT,-,0.00) -128(TCGTGCAG,+,0.00) -12(CTAGGCGG,+,0.00) 561_WT_peak_2709 chr16 16055029 16055303 + 50 NA intron (NM_004996, intron 1 of 30) intron (NM_004996, intron 1 of 30) 11732 NM_004996 4363 Hs.391464 NM_004996 HPRD:01153 ABCC1 ABC29|ABCC|GS-X|MRP|MRP1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein-coding 0.010949 0.385455 561_WT_peak_2909 chr16 75467161 75467373 + 50 NA 5' UTR (NM_006324, exon 1 of 7) 5' UTR (NM_006324, exon 1 of 7) 120 NM_006324 10428 Hs.461361 NM_006324 HPRD:16282 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding 0.113208 0.643192 -121(TCGTCCTCCTCC,+,0.00) -32(AGCCGCCT,-,0.00) -92(GGAGTCGA,-,0.00),-63(TCGACGCT,+,0.00),16(GGCGGCGA,-,0.00) -134(CGGCACGT,-,0.00) -113(CTCCGACG,-,0.00) -44(CAAGACCG,+,0.00) 561_WT_peak_7456 chr9 132565405 132565581 + 50 NA promoter-TSS (NM_014506) promoter-TSS (NM_014506) 61 NM_014506 27348 Hs.252682 NM_014506 HPRD:16270 TOR1B DQ1 torsin family 1, member B (torsin B) protein-coding 0.136364 0.740113 -61(GGCTCCGGGGCG,-,0.00) -93(GGCTTCGA,-,0.00) -44(GCGCTGGCGCTG,-,0.00) -125(GCCGCGGG,+,0.00) -137(TCCTGCCG,+,0.00),-25(CGGCCCGA,-,0.00) -53(GGCGCGGC,-,0.00) -43(CGCTGGCGCTGC,-,0.00) -130(GCTTGGCCGC,-,0.00),-125(GCCGCGGGGC,+,0.00),-50(GCGGCGGCGC,+,0.00) -72(GCGGGCTGGGTG,+,0.00) 561_WT_peak_1021 chr10 69644197 69644475 + 50 NA promoter-TSS (NM_001142498) promoter-TSS (NM_001142498) -91 NM_012238 23411 Hs.369779 NM_012238 HPRD:08381 SIRT1 SIR2L1 sirtuin 1 protein-coding 0.129496 0.734767 91(GGAGGAGGGCCA,-,0.00) -22(CCGAGAGGGCGG,-,0.00) -9(GGCGGCGA,-,0.00),63(CGCGTCGA,-,0.00) -15(GGCGGGGG,+,0.00),42(GCCGCGGG,+,0.00) -25(GCGCCGAGAGGG,-,0.00) -14(GCGGGGGCGGCG,+,0.00) 36(GCCGGAGCCGCG,+,0.00) -126(GGGCCGAGTG,+,0.00) -74(CCGCCACG,-,0.00) -133(GCCGCCGGGGCC,+,0.00) 561_WT_peak_3699 chr19 20959136 20959306 + 50 NA Intergenic Intergenic -114819 NM_145297 199777 Hs.657001 NM_145297 HPRD:15881 ZNF626 - zinc finger protein 626 protein-coding 0.029412 0.590643 -9(AAGTGTCT,+,0.00) 561_WT_peak_6343 chr6 46143324 46143494 + 50 NA Intergenic Intergenic -4662 NM_001290073 59084 Hs.35198 NM_021572 HPRD:13272 ENPP5 NPP-5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) protein-coding 0.005882 0.385965 561_WT_peak_6462 chr6 126277907 126278160 + 50 NA 5' UTR (NM_138571, exon 1 of 5) 5' UTR (NM_138571, exon 1 of 5) 172 NM_138571 135114 Hs.72325 NM_138571 HPRD:17107 HINT3 HINT4 histidine triad nucleotide binding protein 3 protein-coding 0.110672 0.692913 0(GGGCCCGGTAGC,+,0.00) -145(AGCCGGTT,-,0.00) 76(CAGCGCCGGCCT,+,0.00) -142(CGGTTTTG,-,0.00),-123(CGGCTTTG,-,0.00) -71(ACCGCCCA,+,0.00),-5(TGCGCGGG,-,0.00) -13(GCGGAGACTGCG,+,0.00) 561_WT_peak_6766 chr7 99214516 99214692 + 50 NA promoter-TSS (NM_145115) promoter-TSS (NM_145115) 33 NM_145115 221785 Hs.446297 NM_145115 HPRD:15807 ZSCAN25 ZNF498 zinc finger and SCAN domain containing 25 protein-coding 0.107955 0.661017 561_WT_peak_1423 chr11 78002866 78003079 + 50 NA intron (NM_080491, intron 1 of 9) intron (NM_080491, intron 1 of 9) 49954 NM_012296 9846 Hs.429434 NM_012296 HPRD:05866 GAB2 - GRB2-associated binding protein 2 protein-coding 0.000000 0.425234 561_WT_peak_4058 chr2 46926102 46926293 + 50 NA promoter-TSS (NM_144949) promoter-TSS (NM_144949) 98 NM_014011 9655 Hs.468426 NM_014011 HPRD:06159 SOCS5 CIS6|CISH6|Cish5|SOCS-5 suppressor of cytokine signaling 5 protein-coding 0.099476 0.723958 -52(TCCCGCCCCT,+,0.00) -162(AGCGCGCA,+,0.00) 561_WT_peak_5814 chr5 74806982 74807171 + 50 NA promoter-TSS (NM_016218) promoter-TSS (NM_016218) 378 NM_005713 10087 Hs.270437 NM_005713 HPRD:05246 COL4A3BP CERT|CERTL|GPBP|STARD11 collagen, type IV, alpha 3 (Goodpasture antigen) binding protein protein-coding 0.089947 0.689474 -146(GCCCGACG,-,0.00) 11(GGGAGCAGGAGG,+,0.00) -91(AGACCGGCCC,-,0.00) 561_WT_peak_3126 chr17 33569171 33569597 + 50 NA promoter-TSS (NM_144975) promoter-TSS (NM_144975) -702 NM_144975 162394 Hs.709347 NM_144975 SLFN5 - schlafen family member 5 protein-coding 0.068075 0.608899 -29(GCGGAGCCAGGC,+,0.00) -33(CGTGGCGG,+,0.00) -126(GCGGCGGGGC,+,0.00) -164(CAGGCAGCCCGC,-,0.00) 561_WT_peak_3138-2 chr17 35078185 35078323 + 50 NA Intergenic Intergenic 120229 NM_024864 79922 Hs.194864 NM_024864 HPRD:08656 MRM1 - mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) protein-coding 0.014493 0.374101 561_WT_peak_6899 chr7 150365815 150365985 + 50 NA Intergenic Intergenic -16894 NM_015660 26157 Hs.647071 NM_015660 HPRD:16279 GIMAP2 HIMAP2|IAN12|IMAP2 GTPase, IMAP family member 2 protein-coding 0.005882 0.538012 -157(GGGCTGACAGGG,-,0.00),-39(GCACTGAGAGGG,-,0.00) 561_WT_peak_1535 chr11 134146100 134146291 + 50 NA promoter-TSS (NM_001080407) promoter-TSS (NM_001080407) -80 NM_001080407 112937 Hs.721382 NM_138416 HPRD:08814 GLB1L3 - galactosidase, beta 1-like 3 protein-coding 0.115183 0.703125 -53(CGGCACGG,-,0.00) -18(CTCTCTCCGCCC,+,0.00) -2(CCCGCGCA,+,0.00) -155(CGTGTCGG,+,0.00) 561_WT_peak_7582 chrX 75368973 75369367 + 50 NA Intergenic Intergenic -23594 NM_001300888 51260 Hs.370100 NM_016500 HPRD:06659 PBDC1 CXorf26 polysaccharide biosynthesis domain containing 1 protein-coding 0.040609 0.450633 150(CCGCGACG,-,0.00) 561_WT_peak_3958 chr2 9796457 9796712 + 50 NA Intergenic Intergenic -25400 NM_006826 10971 Hs.74405 NM_006826 HPRD:00886 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta protein-coding 0.007843 0.433594 -108(AACCGCTT,-,0.00) 561_WT_peak_1756 chr12 68671577 68671872 + 50 NA Intergenic Intergenic -24443 NM_020525 50616 Hs.287369 NM_020525 HPRD:05621 IL22 IL-21|IL-22|IL-D110|IL-TIF|ILTIF|TIFIL-23|TIFa|zcyto18 interleukin 22 protein-coding 0.010169 0.476351 561_WT_peak_2145 chr14 24657953 24658265 + 50 NA promoter-TSS (NM_024658) promoter-TSS (NM_024658) 15 NM_024658 79711 Hs.411865 NM_024658 HPRD:07022 IPO4 Imp4 importin 4 protein-coding 0.070513 0.623003 -109(CGCCGCTA,+,0.00) -129(CTCCATGGCAGC,-,0.00) 561_WT_peak_895 chr10 15165706 15165968 + 50 NA intron (NM_004808, intron 8 of 11) intron (NM_004808, intron 8 of 11) -26519 NM_153244 221060 Hs.567777 NM_153244 HPRD:16572 C10orf111 bA455B2.4 chromosome 10 open reading frame 111 protein-coding 0.007634 0.365019 561_WT_peak_2754 chr16 28223193 28223501 + 50 NA promoter-TSS (NM_015171) promoter-TSS (NM_015171) -108 NM_015171 23214 Hs.460468 NM_015171 HPRD:10525 XPO6 EXP6|RANBP20 exportin 6 protein-coding 0.149351 0.786408 22(GGCGGAGGGCGG,-,0.00),29(GGCGGAGGGCGG,-,0.00) 129(CGGGCCGGCAGC,+,0.00) -110(CGCGGCCGCC,-,0.00),-46(CGCGGCCGCC,-,0.00) -143(GCGCGCCCGCCC,+,0.00) -99(CCGACCAA,+,0.00) 34(AGGGCGGGGC,-,0.00) -63(GCCGGGCG,+,0.00) 11(CGGGGGGAGCGG,+,0.00) 1(GCGGGGCGAGCG,+,0.00),10(GCGGGGGGAGCG,+,0.00),60(CACTGGCCCCGC,-,0.00),88(CTCTTGCCCCGC,-,0.00) 35(GGGCGGGGCT,+,0.00) -34(GCTGCGGCGC,+,0.00) -49(CAGCGCGGCCGC,-,0.00),-42(GCCGCCGGGCTG,+,0.00),128(GCGGGCCGGCAG,+,0.00) 561_WT_peak_235 chr1 52499181 52499430 + 50 NA non-coding (NR_046406, exon 3 of 3) non-coding (NR_046406, exon 3 of 3) 167 NM_138417 112970 Hs.476033 NM_138417 HPRD:14471 KTI12 SBBI81|TOT4 KTI12 homolog, chromatin associated (S. cerevisiae) protein-coding 0.124498 0.664000 5(CTCGGCAGCC,-,0.00) -132(TCGTGGCG,+,0.00),46(TCTTGCCG,+,0.00) 561_WT_peak_3638 chr19 12903221 12903528 + 50 NA exon (NM_002229, exon 1 of 1) exon (NM_002229, exon 1 of 1) 1064 NM_002229 3726 Hs.25292 NM_002229 HPRD:01303 JUNB AP-1 jun B proto-oncogene protein-coding 0.127036 0.704545 20(AAGCGGCT,+,0.00),32(AACCGGCT,+,0.00) 114(CCGAGAACGCGG,-,0.00) 35(CGGCTGGCGGCC,-,0.00) -66(CCGTGCCG,+,0.00) -54(CGCGCAGCCGGG,+,0.00) 25(GCTGCGGAAC,+,0.00) -50(CAGCCGGGACGC,-,0.00) 561_WT_peak_2309 chr14 78174320 78174585 + 50 NA promoter-TSS (NM_031210) promoter-TSS (NM_031210) 38 NR_052025 81892 Hs.655105 NM_031210 HPRD:12639 SLIRP C14orf156|DC50|PD04872 SRA stem-loop interacting RNA binding protein protein-coding 0.083019 0.567669 23(AGCCGGTT,-,0.00) 60(GGCGTCGA,-,0.00) -57(CGGCTCGA,-,0.00) -163(GCCCACGGCCGC,-,0.00) -5(GCTGCGGCGC,+,0.00) 561_WT_peak_4796 chr21 38936385 38936567 + 50 NA Intergenic CpG 143874 NM_001396 1859 Hs.368240 NM_001396 HPRD:09018 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A protein-coding 0.065934 0.617486 561_WT_peak_2771 chr16 29827104 29827333 + 49 NA promoter-TSS (NM_024516) promoter-TSS (NM_024516) -310 NM_024516 79447 Hs.702841 NM_024516 PAGR1 C16orf53|GAS|PA1 PAXIP1 associated glutamate-rich protein 1 protein-coding 0.056769 0.508696 -30(CCGCCGGCCCGG,+,0.00),26(GCGACTTCCCGG,+,0.00) -52(TCGGTTGG,-,0.00) -35(TCGTCCCG,+,0.00) -29(CGCCGGCCCGGC,-,0.00),-28(GCCGGCCCGGCG,+,0.00) -27(CCGGCCCGGCGG,+,0.00) 561_WT_peak_4354 chr2 169103387 169103570 + 49 NA intron (NM_013233, intron 1 of 17) CpG 627 NM_013233 27347 Hs.276271 NM_013233 HPRD:09627 STK39 DCHT|PASK|SPAK serine threonine kinase 39 protein-coding 0.114754 0.635870 -67(ATGCGGCT,+,0.00) -153(CGGCACGC,-,0.00) -139(AGGAAGATGCGG,+,0.00) -36(GCCGCGCC,+,0.00) -130(CGGCGGCGCCGC,-,0.00) -131(GCGGCGGCGC,+,0.00) 561_WT_peak_4165 chr2 85199253 85199430 + 49 NA intron (NM_020122, intron 1 of 6) intron (NM_020122, intron 1 of 6) 1110 NM_020122 56888 Hs.654968 NM_020122 HPRD:13761 KCMF1 DEBT91|FIGC|PCMF|ZZZ1 potassium channel modulatory factor 1 protein-coding 0.056497 0.573034 -119(CCCGCGGC,-,0.00) -74(AGGTTTTG,-,0.00) 561_WT_peak_5969 chr5 142784763 142784945 + 49 NA promoter-TSS (NM_001018076) promoter-TSS (NM_001018076) -809 NM_001018076 2908 Hs.122926 NM_000176 HPRD:00679 NR3C1 GCCR|GCR|GR|GRL nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) protein-coding 0.071429 0.655738 -92(GGGCGGGGGCTG,-,0.00) -91(GGCGGGGG,+,0.00) 561_WT_peak_3233 chr17 47269207 47269431 + 49 NA Intergenic Intergenic 17424 NM_031498 2793 Hs.181781 NM_031498 HPRD:06792 GNGT2 G-GAMMA-8|G-GAMMA-C|GNG8|GNG9|GNGT8 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 protein-coding 0.044643 0.502222 -2(GAGCTCCAGCCA,+,0.00) -14(CGGTTTTC,-,0.00) 561_WT_peak_159 chr1 33117299 33117473 + 49 NA intron (NM_001135256, intron 1 of 11) intron (NM_001135256, intron 1 of 11) 427 NM_001135256 5928 Hs.16003 NM_005610 HPRD:04232 RBBP4 NURF55|RBAP48|lin-53 retinoblastoma binding protein 4 protein-coding 0.057471 0.565714 -18(AGGTGGCT,+,0.00) -110(TCGGCGCC,+,0.00) -149(CGGGTAAC,+,0.00) 561_WT_peak_4874 chr22 30233985 30234202 + 49 NA intron (NM_001242906, intron 1 of 18) CpG 200 NM_001242906 84164 Hs.731754 NM_032204 HPRD:16515 ASCC2 ASC1p100|p100 activating signal cointegrator 1 complex subunit 2 protein-coding 0.078341 0.701835 -145(GGCGGCCAAG,+,0.00) -128(AGGCGGCT,+,0.00) -103(CGTAAGCG,-,0.00) -97(CGTGGGCCCCGC,-,0.00) -39(CGCGGCTCCTCC,-,0.00) -151(GACCCTGGCGGC,-,0.00) 561_WT_peak_3140 chr17 35849355 35849629 + 49 NA promoter-TSS (NM_007026) promoter-TSS (NM_007026) -459 NM_007026 11072 Hs.91448 NM_007026 HPRD:09427 DUSP14 MKP-L|MKP6 dual specificity phosphatase 14 protein-coding 0.098540 0.658182 -86(CTCGGGCGCC,-,0.00) 39(GGGGTCGA,-,0.00),43(TCGAGGCC,+,0.00) -155(TCGGACGG,-,0.00) 62(CCCGCGGC,-,0.00) 86(CGGATTTG,-,0.00) -82(GGCGCCACGGCT,+,0.00) 561_WT_peak_2975-2 chr17 2163520 2163548 + 49 NA intron (NM_017575, intron 8 of 18) intron (NM_017575, intron 8 of 18) 5959 NM_001256827 23293 Hs.448342 NM_017575 HPRD:06502 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding 0.035714 0.413793 561_WT_peak_3358 chr17 74732917 74733507 + 49 NA promoter-TSS (NM_001242533) promoter-TSS (NM_001242533) 281 NR_036608 6427 Hs.584801 NM_003016 HPRD:02888 SRSF2 PR264|SC-35|SC35|SFRS2|SFRS2A|SRp30b serine/arginine-rich splicing factor 2 protein-coding 0.122034 0.683587 139(GGAGGGGGGCGG,-,0.00) 174(CGGCCCGGAGCC,+,0.00) -162(GCGGGGTGGCGG,-,0.00) 223(GCGACGCC,+,0.00) -160(GGGGTGGCGGTC,-,0.00) -6(GCCGCGGG,+,0.00) 221(GTGCGACG,-,0.00) 215(TGGGCGGT,-,0.00),228(GCCGCGCC,+,0.00) -12(GGCGAAGCCGCG,+,0.00),65(CGCGCCTCAGCG,-,0.00),177(CCCGGAGCCCCG,+,0.00) 75(CGTGTCGG,+,0.00) 301(GCTCCGCAGG,-,0.00) 561_WT_peak_7546 chrX 49126620 49126811 + 49 NA exon (NM_033215, exon 1 of 4) exon (NM_033215, exon 1 of 4) 409 NM_001184745 89801 Hs.433652 NM_033215 HPRD:15170 PPP1R3F HB2E|R3F protein phosphatase 1, regulatory subunit 3F protein-coding 0.109948 0.765625 -124(GGCGGGGG,+,0.00) -114(TTTACCTG,-,0.00) -137(CCCCGTCCCCGC,-,0.00) 561_WT_peak_2214 chr14 53619173 53619394 + 49 NA promoter-TSS (NR_110062) promoter-TSS (NR_110062) 763 NM_001160147 80821 Hs.125525 NM_030637 HPRD:07482 DDHD1 PA-PLA1|PAPLA1|SPG28 DDHD domain containing 1 protein-coding 0.104072 0.680180 -20(TCCTCCGGGCCC,-,0.00),14(GGTGCCGGGCCG,-,0.00),22(GCCGCCGGGCCG,-,0.00) -158(TCGCCGTCCCGG,+,0.00) 40(CGGGTACG,+,0.00) -146(TCCCCGCCCT,+,0.00) -3(CGTCACTA,+,0.00) -151(CCCGGTCCCCGC,-,0.00) 31(CCGCCAAG,-,0.00) -144(CCCGCCCTGGGG,+,0.00),30(GCCGCCAAGCCG,+,0.00) 15(GTGCCGGGCCGC,-,0.00),23(CCGCCGGGCCGC,-,0.00),31(CCGCCAAGCCGG,-,0.00) 561_WT_peak_2654 chr16 2059957 2060134 + 49 NA promoter-TSS (NM_178167) promoter-TSS (NM_178167) -223 NM_178167 90850 Hs.343828 NM_178167 HPRD:11732 ZNF598 - zinc finger protein 598 protein-coding 0.079096 0.589888 -65(CGGCACAA,-,0.00) -158(CGCGGCCACGCG,-,0.00) 561_WT_peak_1590 chr12 10456730 10457015 + 49 NA promoter-TSS (NM_001114396) promoter-TSS (NM_001114396) -178 NM_001114396 3824 Hs.562457 NM_002262 HPRD:04204 KLRD1 CD94 killer cell lectin-like receptor subfamily D, member 1 protein-coding 0.003509 0.412587 -133(CAAAACAG,+,0.00) 561_WT_peak_5121 chr3 52311865 52312036 + 49 NA intron (NM_025222, intron 1 of 8) intron (NM_025222, intron 1 of 8) 709 NM_025222 80335 Hs.194110 NM_025222 HPRD:15183 WDR82 MST107|MSTP107|PRO2730|PRO34047|SWD2|TMEM113|WDR82A WD repeat domain 82 protein-coding 0.040936 0.470930 561_WT_peak_5875 chr5 110560050 110560220 + 49 NA 5' UTR (NM_001744, exon 1 of 11) 5' UTR (NM_001744, exon 1 of 11) 188 NM_001744 814 Hs.591269 NM_001744 CAMK4 CaMK IV|CaMK-GR|IV|caMK calcium/calmodulin-dependent protein kinase IV protein-coding 0.164706 0.748538 -105(CGGCTGGCGGCC,-,0.00) -87(TCGCTCGG,-,0.00) -76(GCGGCGGCGGCG,+,0.00),-73(GCGGCGGCGGCG,+,0.00),-70(GCGGCGGCGGCG,+,0.00),-67(GCGGCGGCGGCG,+,0.00) -4(CCGCCTCG,-,0.00) -41(GCTGCGAAGA,+,0.00) 561_WT_peak_7353 chr9 96213363 96213560 + 49 NA promoter-TSS (NM_014612) promoter-TSS (NM_014612) -517 NM_001286723 23196 Hs.372003 NM_014612 HPRD:12928 FAM120A C9orf10|DNAPTP1|DNAPTP5|OSSA family with sequence similarity 120A protein-coding 0.106599 0.671717 -87(CCGCTCTCCCGG,+,0.00) -38(GCGAGCCGACGG,+,0.00),15(GCCTCGGCTCCC,-,0.00) -106(GGCGCGGC,-,0.00) -105(GCGCGGCCGGCC,+,0.00),-80(CCCGGACCCCGC,-,0.00) 561_WT_peak_1626 chr12 22778140 22778404 + 49 NA exon (NM_018638, exon 1 of 8) exon (NM_018638, exon 1 of 8) 196 NM_001039481 55500 Hs.29464 NM_018638 HPRD:09934 ETNK1 EKI|EKI 1|EKI1|Nbla10396 ethanolamine kinase 1 protein-coding 0.128788 0.716981 -79(CTCGCCCGCC,-,0.00) -55(CAGCCCTCCCGC,+,0.00),78(CGTCCCTCCCGG,+,0.00),86(CCGGCTCCCCGG,+,0.00) -8(TCGGCGCC,+,0.00) -12(TCTGTCGG,-,0.00) -152(CGGGCCGGGC,-,0.00) -87(TCCTGCCG,+,0.00) 85(CCCGGCTCCCCG,-,0.00) -151(GGGCCGGGCT,+,0.00) 55(TGGGCCATGGCC,+,0.00) 561_WT_peak_4337 chr2 157292649 157293027 + 49 NA promoter-TSS (NM_000408) promoter-TSS (NM_000408) -62 NM_000408 2820 Hs.512382 NM_000408 HPRD:00715 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 (mitochondrial) protein-coding 0.103175 0.744063 133(GGGGGAGGCCGA,-,0.00) -68(GTATCCGGGCAG,-,0.00) -64(CCGGGCAGGAGG,-,0.00),-24(CCGGGAGGGAGC,-,0.00),19(GAGGGAAGGCGG,-,0.00),27(GCGGGGGCGCGG,-,0.00),36(CGGCCCGCCCGG,+,0.00) -44(TCGCCGCC,+,0.00) -144(CCCCCGCC,-,0.00),26(GGCGGGGG,+,0.00),41(CGCCCGGC,-,0.00) 61(CCCGCCCAGCCC,+,0.00) -102(TTTCCCCG,-,0.00) -6(GGGAGCGGGAGG,+,0.00) 32(GGCGCGGC,-,0.00) -134(CCCCGGCCCCGG,-,0.00),180(CGCTGGCCCCTC,-,0.00) 32(GGCGCGGCCC,-,0.00) 71(CCGCCTCG,-,0.00) -42(GCCGCCCTGGTC,+,0.00) -47(GCCTCGCCGC,-,0.00) -50(GCGGCCTCGCCG,+,0.00),35(GCGGCCCGCCCG,+,0.00) 561_WT_peak_2204 chr14 50779376 50779603 + 49 NA promoter-TSS (NM_024884) promoter-TSS (NM_024884) 442 NR_033761 27109 Hs.438489 NM_015684 HPRD:12503 ATP5S ATPW|FB|HSU79253 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B) protein-coding 0.083700 0.640351 -98(CGGCCCCAGCCC,+,0.00) -149(CGCACGCG,-,0.00) -160(TCGCTCGG,-,0.00) -101(TCCCGGCCCC,+,0.00) -147(CACGCGGCCC,-,0.00) 561_WT_peak_3183 chr17 40608887 40609070 + 49 NA Intergenic Intergenic -1884 NM_001130021 535 Hs.463074 NM_005177 HPRD:01886 ATP6V0A1 ATP6N1|ATP6N1A|Stv1|VPP1|Vph1|a1 ATPase, H+ transporting, lysosomal V0 subunit a1 protein-coding 0.005464 0.380435 561_WT_peak_5157 chr3 73046006 73046222 + 49 NA promoter-TSS (NM_174907) promoter-TSS (NM_174907) -5 NM_174907 151987 Hs.431092 NM_174907 HPRD:11453 PPP4R2 PP4R2 protein phosphatase 4, regulatory subunit 2 protein-coding 0.101852 0.714286 -65(GGCGTCGG,-,0.00),22(GACGTCGA,-,0.00) -160(TCTGTCGG,-,0.00) -132(CCCCCGGC,-,0.00) -96(GCGTGCCG,+,0.00) -6(AGGCTGTGAGGG,-,0.00) -155(CGGTCTTG,-,0.00) -132(CCCCCGGCTCCC,-,0.00),-122(CCTTCGTTTCCC,-,0.00),-15(GGGAGGCGGAGG,+,0.00) 561_WT_peak_5059 chr3 37284883 37285208 + 49 NA exon (NM_001172713, exon 1 of 23) exon (NM_001172713, exon 1 of 23) 363 NM_001172713 2803 Hs.344151 NM_002078 HPRD:03941 GOLGA4 GCP2|GOLG|MU-RMS-40.18|p230 golgin A4 protein-coding 0.092308 0.644172 79(CCGCTCTCCTCC,+,0.00) -18(CGTACGCT,-,0.00),120(CGCGGACG,+,0.00) 133(GGCGGGGG,+,0.00) 126(CGAAAGAGGCGG,+,0.00) 111(GAACCGGCCC,-,0.00) -79(CGTCGCGG,+,0.00) 561_WT_peak_1563 chr12 6976763 6976945 + 49 NA promoter-TSS (NM_001258026) promoter-TSS (NM_001258026) 161 NM_000365 7167 Hs.524219 NM_000365 HPRD:01833 TPI1 HEL-S-49|TIM|TPI|TPID triosephosphate isomerase 1 protein-coding 0.104396 0.726776 -94(CCGGCCGA,+,0.00) -55(GCCGGGCCGGGG,+,0.00),-49(CCGGGGCCGGGG,+,0.00),-43(CCGGGGCCGGGG,+,0.00) -109(AACGCGGCCA,-,0.00) 561_WT_peak_4711 chr20 60696580 60696976 + 49 NA promoter-TSS (NM_144703) promoter-TSS (NM_144703) -739 NM_144703 149986 Hs.105379 NM_144703 HPRD:12768 LSM14B C20orf40|FAM61B|LSM13|RAP55B|bA11M20.3 LSM14B, SCD6 homolog B (S. cerevisiae) protein-coding 0.103535 0.682620 53(GGAGGAGGGGCA,-,0.00) -47(GCCTCCGGGCCG,-,0.00) -86(GGCGGCCGAG,+,0.00) -64(CCGGGGAGGTGG,-,0.00),124(CCGCCTTCCCGG,+,0.00) 145(CCGCGCCCGCCC,+,0.00) -29(CGGGTACG,+,0.00) 155(CCCCCGCC,-,0.00) -97(AAGCGACG,-,0.00) 144(GCCGCGCC,+,0.00) 561_WT_peak_4686 chr20 50114348 50114614 + 49 NA intron (NM_001258296, intron 3 of 10) intron (NM_001258296, intron 3 of 10) 44777 NM_001258297 4773 Hs.744148 NM_012340 HPRD:02730 NFATC2 NFAT1|NFATP nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 protein-coding 0.022556 0.426966 561_WT_peak_3035 chr17 8089577 8089762 + 49 NA promoter-TSS (NR_039746) promoter-TSS (NR_039746) -594 NR_039746 100616406 NR_039746 MIR4521 - microRNA 4521 ncRNA 0.075676 0.602151 6(AGCGGCTA,-,0.00) -71(CCGGCCGA,+,0.00) -61(TCGTGGCG,+,0.00) -42(CGTCTGAC,+,0.00) -2(TCGGGGTCAGCG,+,0.00) 561_WT_peak_6548 chr6 160883524 160883773 + 49 NA Intergenic Intergenic 48508 NR_028092 80350 Hs.654503 NM_024492 HPRD:17441 LPAL2 APOA2|APOAL|APOARGC lipoprotein, Lp(a)-like 2, pseudogene pseudo 0.000000 0.380000 31(AAGTGTCT,+,0.00) 561_WT_peak_6442 chr6 112125830 112126035 + 49 NA intron (NM_002037, intron 2 of 13) intron (NM_002037, intron 2 of 13) -45598 NM_153048 2534 Hs.390567 NM_002037 HPRD:00655 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding 0.014634 0.441748 561_WT_peak_5395 chr4 1872293 1872651 + 49 NA promoter-TSS (NM_001042424) promoter-TSS (NM_001042424) -651 NM_001042424 7468 Hs.113876 NM_007331 HPRD:04259 WHSC1 MMSET|NSD2|REIIBP|TRX5|WHS Wolf-Hirschhorn syndrome candidate 1 protein-coding 0.142458 0.777159 80(GGCTCCGGGCCC,-,0.00) 22(ACGACGCC,+,0.00) -145(CCGCGCCACCCC,+,0.00) 27(GCCCTGCCCT,+,0.00) 43(TCGTGGCG,+,0.00) 156(CGCCGCTA,+,0.00) 56(CCCTCTCCGCCA,+,0.00) -36(GGTCGGAC,+,0.00),49(CGTCTGAC,+,0.00) -52(GCCGCGCC,+,0.00) 82(CTCCGGGCCCGC,-,0.00),180(CCCAGGCCCCGC,-,0.00) -58(CCCGCAGCCGCG,+,0.00),137(TGCCGCTCCGCG,-,0.00) 62(CCGCCACG,-,0.00),90(CCGCCACG,-,0.00),147(CGAGGCGG,+,0.00) 89(CCCGCCACGGCG,+,0.00),91(CGCCACGGCGGG,-,0.00) 561_WT_peak_4253 chr2 111615966 111616145 + 49 NA intron (NM_001142807, intron 10 of 17) intron (NM_001142807, intron 10 of 17) 125905 NM_001142807 55289 Hs.253320 NM_018308 HPRD:12418 ACOXL - acyl-CoA oxidase-like protein-coding 0.016760 0.477778 -114(GGGTTTTG,-,0.00) 561_WT_peak_7515 chrX 24072707 24072950 + 49 NA promoter-TSS (NM_001415) promoter-TSS (NM_001415) -237 NM_001415 1968 Hs.539684 NM_001415 EIF2S3 EIF2|EIF2G|EIF2gamma|eIF-2gA eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa protein-coding 0.078189 0.606557 -69(CCGGCGGGGCGG,-,0.00) 37(CCTACCGA,+,0.00) -62(GGCGGGGG,+,0.00) -66(GCGGGGCGGGGG,+,0.00) -83(CCGCCTCG,-,0.00) 561_WT_peak_3323 chr17 66255223 66255583 + 49 NA promoter-TSS (NM_014960) promoter-TSS (NM_014960) 80 NM_014960 22901 Hs.437249 NM_014960 ARSG - arylsulfatase G protein-coding 0.097222 0.684211 -99(GGCCCTTCCCGG,+,0.00) 35(TCGGTCGC,-,0.00) 90(GCGTGCCG,+,0.00) -77(CGTCGCTG,+,0.00) -142(GAAGCAGGCAGC,+,0.00) -74(CGCTGTCCCCGG,-,0.00),-48(GCGGGCCCAGCA,+,0.00) 162(CCGCGACG,-,0.00) -36(GCTGCGAACC,+,0.00) -59(CGCCCAGGCCGG,-,0.00) 561_WT_peak_5290 chr3 151034449 151034600 + 49 NA 5' UTR (NM_023915, exon 1 of 3) 5' UTR (NM_023915, exon 1 of 3) 112 NM_023915 53836 Hs.591292 NM_023915 HPRD:16209 GPR87 GPR95|KPG_002 G protein-coupled receptor 87 protein-coding 0.013245 0.453947 -120(CTGGTAAA,+,0.00) 561_WT_peak_7416 chr9 124132022 124132201 + 49 NA intron (NR_073037, intron 1 of 7) CpG 471 NR_073037 2040 Hs.253903 NM_004099 HPRD:00585 STOM BND7|EPB7|EPB72 stomatin protein-coding 0.083799 0.655556 -33(GGCGGCCGCG,+,0.00) -82(CGCGTGCG,+,0.00) 4(ACGTGCCG,+,0.00) -130(CCCGGTCCCCGC,-,0.00) -122(CCGCCTCG,-,0.00) 561_WT_peak_4116 chr2 68431052 68431113 + 49 NA intron (NM_000945, intron 2 of 5) intron (NM_000945, intron 2 of 5) 46077 NM_020143 56902 Hs.262858 NM_020143 HPRD:14250 PNO1 KHRBP1|RRP20 partner of NOB1 homolog (S. cerevisiae) protein-coding 0.000000 0.274194 561_WT_peak_3509 chr18 54318626 54318848 + 49 NA 5' UTR (NM_052834, exon 1 of 27) 5' UTR (NM_052834, exon 1 of 27) 121 NM_052834 23335 Hs.465213 NM_015285 HPRD:10306 WDR7 TRAG WD repeat domain 7 protein-coding 0.063063 0.609865 -45(TGGCTGGGGCGC,-,0.00) -6(CGGCATGA,-,0.00) -83(CCGCATCCTCCG,-,0.00) 561_WT_peak_996 chr10 52396401 52396574 + 49 NA Intergenic Intergenic -12750 NM_147156 259230 Hs.654698 NM_147156 HPRD:18203 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding 0.011561 0.402299 561_WT_peak_647 chr1 183440521 183440863 + 49 NA promoter-TSS (NM_201568) promoter-TSS (NM_201568) 425 NR_040063 284649 Hs.127384 NR_040063 ENSG00000232860 SMG7-AS1 DKFZP564C196 SMG7 antisense RNA 1 ncRNA 0.058480 0.647230 -31(TCCACGCC,+,0.00) -45(CAGGCCCAGCCC,+,0.00) -42(GCCCAGCCCT,+,0.00) -27(CGCCCGGC,-,0.00) -47(CGCAGGCCCAGC,-,0.00) 561_WT_peak_367 chr1 110754184 110754396 + 49 NA non-coding (NR_036437, exon 1 of 5) non-coding (NR_036437, exon 1 of 5) 954 NM_004978 3749 Hs.153521 NM_004978 HPRD:08887 KCNC4 C1orf30|HKSHIIIC|KSHIIIC|KV3.4 potassium voltage-gated channel, Shaw-related subfamily, member 4 protein-coding 0.117925 0.704225 -55(CCGGGAACCCGC,-,0.00) -128(GGCGTCGG,-,0.00) -19(GGCGGGGG,+,0.00),38(GGCGGGGG,+,0.00) -98(CGGCACGC,-,0.00),-10(CGGCCCGA,-,0.00) 25(CGGCAGCAGCGG,+,0.00) -126(CGTCGGAG,+,0.00) -102(TGGGCGGC,-,0.00) -47(CCGCCTCG,-,0.00) 561_WT_peak_4211 chr2 96811038 96811274 + 49 NA promoter-TSS (NM_004418) promoter-TSS (NM_004418) 23 NM_004418 1844 Hs.1183 NM_004418 HPRD:04348 DUSP2 PAC-1|PAC1 dual specificity phosphatase 2 protein-coding 0.139831 0.755274 20(GCCTCCGGGGCA,-,0.00) -71(CCGCGTCCCGGG,+,0.00),17(CCGGCCTCCGGG,+,0.00) -30(TCGACTCC,+,0.00) 55(GCGCTGGCGCCC,-,0.00) -56(TCGTGGCG,+,0.00) -2(CGGGTTAA,+,0.00) -146(GCCGCGCA,+,0.00) -157(GCGTGCCCAGCG,+,0.00) -55(CGTGGCGG,+,0.00) 561_WT_peak_6070 chr6 292550 292851 + 49 NA intron (NR_104475, intron 1 of 3) CpG 643 NM_001286555 56940 Hs.29106 NM_020185 HPRD:13255 DUSP22 JKAP|JSP-1|JSP1|LMW-DSP2|LMWDSP2|MKP-x|MKPX|VHX dual specificity phosphatase 22 protein-coding 0.132890 0.711921 42(GCTTCCGGGTAG,-,0.00) 63(AGCCGCCT,-,0.00) 39(CCGGCTTCCGGG,+,0.00) -114(CCGACGCC,+,0.00),-93(GGCGTCGG,-,0.00),-11(GGCGGCGA,-,0.00) -139(CGTTCGCG,-,0.00) -34(CGGAGGGAGGGG,+,0.00) -116(CTCCGACG,-,0.00),-83(GCCCGACG,-,0.00) -13(TGGGCGGC,-,0.00),107(GCCGCGCC,+,0.00) -10(GCGGCGACCGCG,+,0.00) -2(CGCGGAGTCGGG,+,0.00) 561_WT_peak_4404 chr2 192058811 192059091 + 49 NA Intergenic Intergenic -42629 NM_001243835 6775 Hs.80642 NM_003151 HPRD:02779 STAT4 SLEB11 signal transducer and activator of transcription 4 protein-coding 0.000000 0.419929 -65(GGGCCTCTTT,+,0.00) 561_WT_peak_6742 chr7 87505879 87506196 + 49 NA promoter-TSS (NM_018843) promoter-TSS (NM_018843) -345 NM_018843 55972 Hs.208414 NM_018843 HPRD:14372 SLC25A40 MCFP solute carrier family 25, member 40 protein-coding 0.072555 0.616352 -164(GGCCCCGGAAAC,+,0.00) -74(GCCGGGGG,+,0.00),-9(GCCGGGCG,+,0.00) -54(CGCGGCTGCCCG,-,0.00) 561_WT_peak_1166 chr10 126605106 126605355 + 49 NA Intergenic CpG -25462 NM_017580 54764 Hs.595158 NM_017580 HPRD:11738 ZRANB1 TRABID zinc finger, RAN-binding domain containing 1 protein-coding 0.140562 0.712000 -53(CCCGCGGC,-,0.00) 72(CCCCCTGAGCCC,+,0.00) 5(GGCCGACG,-,0.00) -32(CAAGACCG,+,0.00) -95(CCTCCAGGCCGC,-,0.00) 561_WT_peak_1936 chr12 133757913 133758151 + 49 NA promoter-TSS (NM_001165885) promoter-TSS (NM_001165885) -28 NM_001165881 10795 Hs.124047 NM_003415 HPRD:05300 ZNF268 HZF3 zinc finger protein 268 protein-coding 0.084034 0.619247 -135(GCTTCCGGGTCA,-,0.00) -59(AGAGGCCT,-,0.00),-57(AGGCCTCT,+,0.00) -114(GCCCCCTCCCGG,+,0.00) 561_WT_peak_109 chr1 25174515 25174869 + 49 NA Intergenic CpG 71215 NR_106789 102465437 NR_106789 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA 0.087571 0.678873 138(GCGCCTCCCCCG,+,0.00) -71(TCGGCGCC,+,0.00) -51(AGGGCTGGGA,-,0.00),157(AGGGCAGGGA,-,0.00) 144(CCCCCGGC,-,0.00) 86(CCTTCCTGTGTC,-,0.00) 51(TGCGCGCT,-,0.00) 109(CCCCGGCGCCGC,-,0.00) -91(GGGCCGCGGT,+,0.00) 56(GCTGCGAAGG,+,0.00),119(GCTGCGAACC,+,0.00) 561_WT_peak_7131 chr8 124253314 124253696 + 49 NA exon (NM_032847, exon 1 of 6) exon (NM_032847, exon 1 of 6) 133 NM_032847 84933 Hs.707401 NM_032847 HPRD:08605 C8orf76 - chromosome 8 open reading frame 76 protein-coding 0.138743 0.744125 -158(GGAGGAGGAGGG,-,0.00),-63(CGCGGAGGGCGA,-,0.00) -162(CCGTGGAGGAGG,-,0.00),-142(CGGGGGACGCGG,-,0.00) 77(TCGCCGCC,+,0.00) -133(CGGCGGGCGCTG,-,0.00),-75(GGGCCGGGGCCC,-,0.00) -104(CGTTCGCG,-,0.00),-98(CGCGGACG,+,0.00) -144(GGCGGGGG,+,0.00),115(CCCGCGGC,-,0.00),120(GGCGGGGG,+,0.00) 181(CGGCACGC,-,0.00) -9(CCTGCGGCTCGC,-,0.00) -78(CCGGGGCCGGGG,+,0.00),138(GCGGGGCCCGCC,+,0.00) -71(CGGGGCCCCGCG,-,0.00) 211(CGACGCGG,+,0.00) 561_WT_peak_5125 chr3 53080421 53080722 + 49 NA promoter-TSS (NM_016329) promoter-TSS (NM_016329) -482 NM_016329 51460 Hs.343679 NM_016329 HPRD:09539 SFMBT1 RU1|SFMBT|hSFMBT Scm-like with four mbt domains 1 protein-coding 0.119601 0.725166 51(GCCGCGGG,+,0.00) 41(GCGTGCCG,+,0.00) 101(CCCTCTGAGACC,+,0.00) -65(GGTCGGAC,+,0.00) -143(CCCTGGCCCAGC,-,0.00) -147(CCCGCCCTGGCC,+,0.00) -44(CCGGCGAAGC,+,0.00) 561_WT_peak_4366 chr2 172543803 172544017 + 49 NA promoter-TSS (NM_001271786) promoter-TSS (NM_001271786) -9 NM_001271788 1781 Hs.546250 NM_001378 HPRD:04512 DYNC1I2 DNCI2|IC2 dynein, cytoplasmic 1, intermediate chain 2 protein-coding 0.070093 0.530233 -66(GCGACGCC,+,0.00) -68(TTGCGACG,-,0.00) -28(CGTCGCAC,+,0.00) 561_WT_peak_6022 chr5 172386151 172386438 + 49 NA promoter-TSS (NM_016093) promoter-TSS (NM_016093) 77 NR_026682 100268168 Hs.519766 NR_026682 ENSG00000204758 LOC100268168 - uncharacterized LOC100268168 ncRNA 0.076655 0.611111 -66(AAGCCTCT,+,0.00),29(AAGCCGCT,+,0.00) -17(TCGCCCTCCCGG,+,0.00) 72(GGCTTCGA,-,0.00) 114(TTCCGGCCCT,+,0.00) 98(CGGCACGG,-,0.00) 94(TGCGCGGC,-,0.00) 561_WT_peak_5510 chr4 78775733 78775907 + 49 NA Intergenic Intergenic -7985 NM_020236 65008 Hs.532019 NM_020236 ENSG00000169288 MRPL1 BM022|L1MT|MRP-L1 mitochondrial ribosomal protein L1 protein-coding 0.011494 0.325714 561_WT_peak_1821 chr12 98909437 98909653 + 49 NA non-coding (NR_027157, exon 2 of 2) non-coding (NR_027157, exon 2 of 2) 194 NM_003276 7112 Hs.11355 NM_003276 HPRD:01777 TMPO CMD1T|LAP2|LEMD4|PRO0868|TP thymopoietin protein-coding 0.115741 0.682028 -132(GTGTCCGGGTCT,-,0.00) -71(CCGGGCAGGAGC,-,0.00) -38(CGCGGTCCCCGG,-,0.00) -88(GCTCCGCAGC,-,0.00),27(GCTTCGCAGA,-,0.00) 561_WT_peak_884 chr10 11208228 11208417 + 49 NA intron (NM_001025076, intron 2 of 14) intron (NM_001025076, intron 2 of 14) 1329 NM_001083591 10659 Hs.309288 NM_006561 HPRD:03964 CELF2 BRUNOL3|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding 0.010582 0.478947 561_WT_peak_4003 chr2 27994641 27994834 + 49 NA intron (NM_145330, intron 1 of 2) CpG 153 NM_145330 9553 Hs.515879 NM_004891 HPRD:14753 MRPL33 C2orf1|L33mt|MRP-L33|RPL33L mitochondrial ribosomal protein L33 protein-coding 0.093264 0.659794 -76(GGCCCCGGAATG,+,0.00) -61(CGGGGAAGGATG,-,0.00) 19(CCCGCGGC,-,0.00) 17(GCCCCGCGGC,-,0.00) 561_WT_peak_7593 chrX 100663557 100663699 + 49 NA promoter-TSS (NM_000169) promoter-TSS (NM_000169) 507 NM_019597 3188 Hs.432485 NM_019597 HPRD:03022 HNRNPH2 FTP3|HNRPH'|HNRPH2|hnRNPH' heterogeneous nuclear ribonucleoprotein H2 (H') protein-coding 0.028169 0.489510 561_WT_peak_5837 chr5 81047277 81047556 + 49 NA promoter-TSS (NM_001256734) promoter-TSS (NM_001256734) -344 NM_001256736 23635 Hs.102735 NM_012446 SSBP2 HSPC116|SOSS-B2 single-stranded DNA binding protein 2 protein-coding 0.093190 0.717857 -67(GACTTCGGGGCG,-,0.00) -27(CTCAGCCGCC,-,0.00) -60(GGGCGCCCGCCG,+,0.00) 88(CCCCCGCC,-,0.00) -102(CCGGAGCCGGCG,+,0.00) -80(CGTGGCGG,+,0.00) -83(AGCCGTGGCGGC,-,0.00),-23(GCCGCCCTGGGG,+,0.00) 561_WT_peak_7334 chr9 92330316 92330497 + 49 NA intron (NR_024280, intron 5 of 5) MLT1F2-int|LTR|ERVL-MaLR 75708 NR_024280 100129066 Hs.125947 NR_024280 UNQ6494 - uncharacterized LOC100129066 ncRNA 0.011050 0.417582 -41(TAGGGACG,-,0.00) 561_WT_peak_1113 chr10 99473878 99474071 + 49 NA exon (NM_031484, exon 1 of 2) exon (NM_031484, exon 1 of 2) 509 NM_031484 83742 Hs.744073 NM_031484 HPRD:14364 MARVELD1 GB14|MARVD1|MRVLDC1|bA548K23.8 MARVEL domain containing 1 protein-coding 0.113990 0.690722 -97(GGCGGCCGCG,+,0.00) -139(GGGCTCGCGCTG,-,0.00) -20(ATTACCCG,-,0.00) 561_WT_peak_6853 chr7 134855423 134855683 + 49 NA promoter-TSS (NM_001243754) promoter-TSS (NM_001243754) 25 NM_001243749 78996 Hs.732134 NM_024033 HPRD:08333 C7orf49 MRI chromosome 7 open reading frame 49 protein-coding 0.130769 0.754789 -159(CGCCTGGCGCCC,-,0.00) 9(TCAGTCGG,-,0.00) -47(TCCCGGCCCC,+,0.00) -121(CCGCCTCTTCCG,-,0.00) -39(CCCTCGCAGTCC,+,0.00) -61(CGGTCTTG,-,0.00) -13(CTTCCGGCTCCC,-,0.00) 75(TGCGCGCT,-,0.00) -114(TTCCGGCCCCGC,-,0.00) 561_WT_peak_2607 chr15 91373515 91373773 + 49 NA Intergenic FLAM_A|SINE|Alu -38178 NM_002569 5045 Hs.513153 NM_002569 HPRD:00653 FURIN FUR|PACE|PCSK3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding 0.023256 0.501931 561_WT_peak_6310 chr6 37019213 37019383 + 49 NA Intergenic Intergenic 45875 NM_173558 221472 Hs.509664 NM_173558 HPRD:05478 FGD2 ZFYVE4 FYVE, RhoGEF and PH domain containing 2 protein-coding 0.052941 0.584795 -64(CGCGTGCG,+,0.00) -58(CGGCAGGA,-,0.00) 561_WT_peak_4364 chr2 172175706 172175870 + 49 NA 3' UTR (NM_024770, exon 10 of 10) 3' UTR (NM_024770, exon 10 of 10) -87964 NM_001136554 9874 Hs.744917 NM_012290 ENSG00000198586 TLK1 PKU-beta tousled-like kinase 1 protein-coding 0.018293 0.424242 -41(AGAGGCTT,-,0.00) -107(CGGGGAAA,+,0.00) -62(GAGGCAGGAAGC,+,0.00) 561_WT_peak_2975 chr17 2163299 2163425 + 49 NA intron (NM_017575, intron 8 of 18) intron (NM_017575, intron 8 of 18) 6131 NM_001256827 23293 Hs.448342 NM_017575 HPRD:06502 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding 0.007937 0.448819 561_WT_peak_5015 chr3 14444071 14444292 + 49 NA exon (NM_001134367, exon 1 of 23) exon (NM_001134367, exon 1 of 23) 105 NM_001134368 6533 Hs.529488 NM_003043 HPRD:01734 SLC6A6 TAUT solute carrier family 6 (neurotransmitter transporter), member 6 protein-coding 0.072398 0.630631 -87(AAGCCGCT,+,0.00),-86(AGCCGCTT,-,0.00) -61(TCGCGCCG,+,0.00) -93(AGGAAGAAGCCG,+,0.00),-70(CCGCTTCCTTCG,-,0.00) -46(CGCCGAGCCCCG,+,0.00) -59(GCGCCGCCGC,-,0.00) 561_WT_peak_1454 chr11 93517481 93517696 + 49 NA 5' UTR (NM_004268, exon 1 of 12) 5' UTR (NM_004268, exon 1 of 12) 183 NM_004268 9440 Hs.444931 NM_004268 MED17 CRSP6|CRSP77|DRIP80|TRAP80 mediator complex subunit 17 protein-coding 0.093023 0.648148 -52(TCCCGGCTCT,+,0.00) 19(GGCCGACG,-,0.00) -140(GCTGGGCCAGCT,+,0.00) -73(CGCGGCTGCGGG,-,0.00) 561_WT_peak_492 chr1 149784647 149785092 + 49 NA promoter-TSS (NM_001161334) promoter-TSS (NM_001161334) 367 NM_001123375 653604 Hs.712062 NM_001123375 ENSG00000183598 HIST2H3D - histone cluster 2, H3d protein-coding 0.080899 0.618834 206(CGCGTACC,+,0.00) 262(TAGCGCCG,-,0.00) -93(GCTGCGCA,+,0.00) 561_WT_peak_6712 chr7 73588734 73588976 + 49 NA intron (NM_031992, intron 1 of 5) CpG 149 NM_022170 7458 Hs.520943 NM_022170 HPRD:11940 EIF4H WBSCR1|WSCR1|eIF-4H eukaryotic translation initiation factor 4H protein-coding 0.152893 0.802469 -136(GGCGGCAGAG,+,0.00) -40(CCGGGGCGGCGG,-,0.00) -115(CGTGCGCG,-,0.00) 10(AGGGCCGGGG,-,0.00) -26(GGCGGGGG,+,0.00) -113(TGCGCGGG,-,0.00) -91(GCGGGACCGGCG,+,0.00) 561_WT_peak_4700 chr20 55973276 55973400 + 49 NA intron (NM_001291780, intron 4 of 4) intron (NM_001291780, intron 4 of 4) 6884 NM_001291780 55544 Hs.236361 NM_017495 HPRD:15268 RBM38 HSRNASEB|RNPC1|SEB4B|SEB4D|dJ800J21.2 RNA binding motif protein 38 protein-coding 0.056452 0.608000 -55(AAATGGGCCC,-,0.00) 561_WT_peak_5407 chr4 6717767 6717923 + 49 NA promoter-TSS (NM_018366) promoter-TSS (NM_018366) 3 NM_018366 55330 Hs.7570 NM_018366 HPRD:12035 BLOC1S4 BCAS4L|BLOS4|CNO biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino protein-coding 0.173077 0.719745 -40(CGCGGAGGCCGG,-,0.00) -76(CGCGTGCG,+,0.00) -110(CCCTCGCAGGCC,+,0.00) -20(GCTGCGCA,+,0.00),-18(TGCGCAGT,-,0.00) -152(GCTGGGAGGC,+,0.00) 561_WT_peak_89 chr1 19923467 19923773 + 49 NA intron (NM_001204089, intron 1 of 3) CpG 149 NM_001204082 440574 Hs.466662 NM_001032363 ENSG00000173436 MINOS1 C1orf151|MIO10 mitochondrial inner membrane organizing system 1 protein-coding 0.094771 0.713355 -63(GGGACCGGTGTC,+,0.00) -129(GCCGGCCGAG,+,0.00) 71(AGGCCTCT,+,0.00) -128(CCGGCCGA,+,0.00) -74(CGGCAGGA,-,0.00) 114(CCCGGGCCCCGG,-,0.00) 99(GGCCAGGGCGAG,-,0.00),110(GCCGCCCGGGCC,+,0.00) 561_WT_peak_3089 chr17 26684604 26684879 + 49 NA promoter-TSS (NM_152464) promoter-TSS (NM_152464) 54 NM_152464 147007 Hs.707906 NM_152464 TMEM199 C17orf32 transmembrane protein 199 protein-coding 0.105455 0.659420 -4(AGCGGCTA,-,0.00) -128(GCGCGGCGGGCG,+,0.00) 17(GGGCCGAGCT,+,0.00) 561_WT_peak_5546 chr4 89300440 89300661 + 49 NA intron (NM_017912, intron 1 of 22) intron (NM_017912, intron 1 of 22) 659 NM_017912 55008 Hs.529317 NM_017912 HPRD:13647 HERC6 - HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 protein-coding 0.049774 0.554054 -48(CGGATTTG,-,0.00) 561_WT_peak_5657 chr4 190970919 190971115 + 49 NA Intergenic Intergenic -14640 NR_121644 100419743 NR_121644 DBET DBE-T D4Z4 binding element transcript (non-protein coding) ncRNA 0.030612 0.593909 -142(AGGGCTGGGA,-,0.00),0(AGGGCTGGGA,-,0.00) -141(GGGCTGGGAGTG,-,0.00),1(GGGCTGGGAGTG,-,0.00) -91(CGCGGAGCCTCG,+,0.00) 561_WT_peak_3895 chr19 54975748 54975994 + 48 NA promoter-TSS (NM_198988) promoter-TSS (NM_198988) -977 NM_198988 94059 Hs.590976 NM_198988 HPRD:13986 LENG9 - leukocyte receptor cluster (LRC) member 9 protein-coding 0.073171 0.676113 -93(AGACACTT,-,0.00) -59(CGGCGGCTCCGC,-,0.00),26(GGCTGGCCCCGC,-,0.00) -58(GGCGGCTCCGCC,-,0.00) 19(CCGCCTCG,-,0.00) 561_WT_peak_983 chr10 46090271 46090530 + 48 NA promoter-TSS (NM_145021) promoter-TSS (NM_145021) -46 NM_145021 220972 Hs.499489 NM_145021 HPRD:17466 MARCH8 MARCH-VIII|MIR|RNF178|c-MIR membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase protein-coding 0.123552 0.711538 -49(CCGGCCGA,+,0.00) -105(CGCCCCTCCGCG,-,0.00) -48(CGGCCGAGTT,+,0.00) -164(CCGAGACG,-,0.00) -150(CAGCAAGGCCGC,-,0.00),25(GCGGCCTTTCTG,+,0.00) 561_WT_peak_2 chr1 29090 29263 + 48 NA intron (NR_024540, intron 1 of 10) CpG 194 NR_024540 653635 Hs.446466 NR_024540 ENSG00000227232 WASH7P FAM39F|WASH5P WAS protein family homolog 7 pseudogene pseudo 0.127168 0.770115 -25(CCGCCCGCCTCC,+,0.00) -6(CCCTCCGGGTCC,-,0.00) -145(AGACGCCT,-,0.00) -136(CCGGGCGGTCGG,-,0.00) -132(GCGGTCGG,-,0.00),-50(TCGGTCAG,-,0.00) -36(TCCCGGGCCT,+,0.00) -5(CCTCCGGGTCCC,-,0.00) -159(CCGGGGCGAGCC,+,0.00) -54(CTTCTCGG,+,0.00) 561_WT_peak_4381 chr2 179278392 179278684 + 48 NA non-coding (NR_110205, exon 1 of 4) non-coding (NR_110205, exon 1 of 4) 152 NR_110205 101927027 Hs.715694 NR_110204 ENSG00000223960 LOC101927027 - uncharacterized LOC101927027 ncRNA 0.095890 0.675768 -109(CGGGCAGGGA,-,0.00) 32(CCCCCGGC,-,0.00) -135(GCGGCGCCCGCT,+,0.00) 76(GCCTCGCGGC,-,0.00),103(GCGCCGCCGC,-,0.00) 561_WT_peak_6334 chr6 43484875 43485061 + 48 NA promoter-TSS (NM_015388) promoter-TSS (NM_015388) 191 NM_203290 9533 Hs.743509 NM_004875 HPRD:09661 POLR1C RPA39|RPA40|RPA5|RPAC1|TCS3 polymerase (RNA) I polypeptide C, 30kDa protein-coding 0.053763 0.572193 -101(TCGGGCGG,-,0.00) -163(TGCGGAGCCGCG,+,0.00) 561_WT_peak_6154 chr6 26205514 26205802 + 48 NA TTS (NM_003545) TTS (NM_003545) 785 NM_003545 8367 Hs.662174 NM_003545 HIST1H4E H4/j|H4FJ histone cluster 1, H4e protein-coding 0.055556 0.487889 -114(GGCGGAGAGCGA,-,0.00) -13(AGCGGCCT,-,0.00) 15(ACGACCGA,+,0.00) -148(GAAAACCG,+,0.00),-98(CAAAGCCG,+,0.00) 561_WT_peak_6380 chr6 79788401 79788619 + 48 NA promoter-TSS (NM_017934) promoter-TSS (NM_017934) -499 NM_017934 55023 Hs.511817 NM_017934 HPRD:10152 PHIP BRWD2|DCAF14|WDR11|ndrp pleckstrin homology domain interacting protein protein-coding 0.050459 0.534247 -119(CGCGTACA,+,0.00) 561_WT_peak_4062 chr2 47748509 47748832 + 48 NA exon (NM_022055, exon 2 of 2) exon (NM_022055, exon 2 of 2) -6006 NR_120602 644093 Hs.734158 NR_120602 HCG2040054 - uncharacterized LOC644093 ncRNA 0.102167 0.697531 100(AGGCCGCT,+,0.00) 62(CCGAGAGCGCGG,-,0.00) 114(CAGCTGGCGCTC,-,0.00),127(CGGCAGGCGCGC,-,0.00) -59(TCCCAGCCCT,+,0.00) 69(CGCGGAGCCGCG,+,0.00),69(CGCGGAGCCGCG,-,0.00) 105(GCTGCGGCGC,+,0.00),108(GCGGCGCAGC,+,0.00),108(GCGGCGCAGC,-,0.00) -137(GCGTGCTGGCTG,+,0.00) 561_WT_peak_6378 chr6 79577087 79577267 + 48 NA promoter-TSS (NM_001010844) promoter-TSS (NM_001010844) -84 NM_001010844 134728 Hs.656212 NM_001010844 HPRD:17157 IRAK1BP1 AIP70|SIMPL interleukin-1 receptor-associated kinase 1 binding protein 1 protein-coding 0.083333 0.585635 -7(TTCGGCCGCC,-,0.00) 4(TCGGCCGG,-,0.00) -120(CGGCAAGA,-,0.00) 2(CGTCGGCC,+,0.00) -9(CCTTCGGCCGCC,-,0.00) 561_WT_peak_679 chr1 202976149 202976320 + 48 NA promoter-TSS (NM_138391) promoter-TSS (NM_138391) 159 NR_036557 100506747 Hs.642024 NR_036557 LOC100506747 - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein LOC641515 homolog pseudo 0.017544 0.470930 561_WT_peak_3894 chr19 54974627 54974970 + 48 NA promoter-TSS (NM_198988) promoter-TSS (NM_198988) 96 NM_198988 94059 Hs.590976 NM_198988 HPRD:13986 LENG9 - leukocyte receptor cluster (LRC) member 9 protein-coding 0.110787 0.732558 -145(GCGGGGGCGCGG,-,0.00) -146(GGCGGGGG,+,0.00),-126(GGCGGGGG,+,0.00) -164(AGGAAGAAGCGG,+,0.00) -58(GCCGCGCA,+,0.00) -63(CGCCCGCCGCGC,-,0.00) -129(CGTGGCGG,+,0.00) -89(GCTGCCATGGGT,+,0.00) 561_WT_peak_4111 chr2 65658834 65658934 + 48 NA intron (NM_181784, intron 1 of 5) CpG 772 NM_181784 200734 Hs.59332 NM_181784 HPRD:18100 SPRED2 Spred-2 sprouty-related, EVH1 domain containing 2 protein-coding 0.100000 0.742574 -100(GCCCGCCAGCCC,+,0.00) -98(CCGCCAGCCCGC,-,0.00) 561_WT_peak_2838 chr16 50058878 50059060 + 48 NA promoter-TSS (NM_001281789) promoter-TSS (NM_001281789) -148 NR_104042 255919 Hs.59134 NM_153261 HPRD:08784 CNEP1R1 C16orf69|NEP1-R1|TMEM188|TMP125 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein-coding 0.087912 0.639344 -105(GCGACGCC,+,0.00),-36(GGCGCCGA,-,0.00) -47(GTCCAACG,-,0.00) -105(GCGACGCCAGCG,+,0.00) -87(CCGCCTGGCCGC,-,0.00) 561_WT_peak_4676 chr20 48763498 48763727 + 48 NA intron (NM_199129, intron 1 of 5) intron (NM_199129, intron 1 of 5) 6723 NM_001162505 387521 Hs.744839 NM_199129 HPRD:17257 TMEM189 KUA transmembrane protein 189 protein-coding 0.030568 0.569565 -83(CCGATCGA,+,0.00) 561_WT_peak_286 chr1 70687116 70687472 + 48 NA intron (NM_001190987, intron 1 of 12) intron (NM_001190987, intron 1 of 12) 15929 NM_001190987 9295 Hs.479693 NM_004768 HPRD:03599 SRSF11 NET2|SFRS11|dJ677H15.2|p54 serine/arginine-rich splicing factor 11 protein-coding 0.103933 0.669468 -29(TCCCCCTCCTTC,+,0.00) -44(CAATCCGGTTCC,-,0.00),91(GGGCCCGGTGGC,+,0.00) 115(GGCGGCGGAG,+,0.00) -140(CCCGCGGC,-,0.00) -156(CGCTCTCATCCC,+,0.00) -68(CATCGGAC,+,0.00) -111(GCGGCGGCGGCG,+,0.00),-108(GCGGCGGCGGCG,+,0.00) -130(GCGGCGGGGC,+,0.00) 561_WT_peak_1214 chr11 13689632 13689802 + 48 NA promoter-TSS (NM_032228) promoter-TSS (NM_032228) -489 NM_032228 84188 Hs.501991 NM_032228 HPRD:14724 FAR1 MLSTD2|SDR10E1 fatty acyl CoA reductase 1 protein-coding 0.094118 0.684211 -29(CGCGGGCCTCGC,-,0.00) -145(CCGCCAAG,-,0.00) -24(GCCTCGCTGC,-,0.00) -27(CGGGCCTCGCTG,+,0.00) 561_WT_peak_6518 chr6 151711957 151712174 + 48 NA intron (NM_020861, intron 1 of 2) CpG 612 NM_020861 57621 Hs.520073 NM_020861 HPRD:10314 ZBTB2 ZNF437 zinc finger and BTB domain containing 2 protein-coding 0.133641 0.752294 12(TCGCCCCCCTCC,+,0.00),21(TCCCCTTCCTCC,+,0.00) -135(GGCGGCGA,-,0.00),-127(GGCGTCGG,-,0.00) 2(CGAACGCG,-,0.00) 22(CCCCTTCCTCCC,-,0.00) -125(CGTCGGAA,+,0.00) -4(GGGAACCGAACG,+,0.00) -56(GCCGCCCA,+,0.00) -41(CTTCGCGG,+,0.00) -134(GCGGCGAGGC,+,0.00) 561_WT_peak_6646 chr7 39662857 39663042 + 48 NA promoter-TSS (NM_005402) promoter-TSS (NM_005402) -203 NM_005402 5898 Hs.6906 NM_005402 HPRD:01549 RALA RAL v-ral simian leukemia viral oncogene homolog A (ras related) protein-coding 0.108108 0.698925 -126(ACGACGCC,+,0.00) -95(CCCGCGGC,-,0.00),-40(GCCGGGGG,+,0.00) -26(CGTCGGAA,+,0.00) -101(GCGAGGCCCGCG,+,0.00) 561_WT_peak_4396 chr2 191399093 191399389 + 48 NA intron (NM_001142645, intron 1 of 8) CpG 227 NM_001142645 100131211 Hs.659824 NM_001142645 TMEM194B - transmembrane protein 194B protein-coding 0.131757 0.747475 -126(GGGCCTGCCCGG,+,0.00),-30(CCGCGAAGCCGG,-,0.00),46(CCGCCTCCCCGC,+,0.00) -92(GAGCGCCCGCCC,+,0.00) -8(CGCACGCG,-,0.00),55(CGCGCACG,+,0.00) 53(CCCGCGCA,+,0.00),112(GGCGCGGC,-,0.00) -129(GCGGGGCCTGCC,+,0.00),-4(CGCGCGCGCCGC,-,0.00),2(CGCCGCCGCCGC,-,0.00),35(CGCTGCCGCCGC,-,0.00) -70(CGCGGTGCCGCC,+,0.00),-29(CGCGAAGCCGGG,+,0.00) 112(GGCGCGGCCC,-,0.00) -30(CCGCGAAG,-,0.00) -64(GCCGCCCGGGCC,+,0.00) -31(GCCGCGAAGC,+,0.00),1(GCGCCGCCGC,-,0.00) -127(GGGGCCTGCCCG,+,0.00) 561_WT_peak_3650 chr19 14192133 14192344 + 48 NA TTS (NM_001277378) TTS (NM_001277378) 4369 NM_001277378 646457 Hs.569971 NM_001277378 ENSG00000188032 C19orf67 - chromosome 19 open reading frame 67 protein-coding 0.061611 0.504717 -149(ACTTCCGGGTCA,-,0.00) 13(CTCGTCCGCC,-,0.00) -113(AAGTCTCT,+,0.00) -49(CGGTGTTG,-,0.00) -144(CGGGTCAA,+,0.00),-86(TTTCCCCG,-,0.00) 561_WT_peak_5878 chr5 112358533 112358703 + 48 NA TTS (NM_152624) TTS (NM_152624) 46211 NM_001242377 167227 Hs.443875 NM_152624 HPRD:13125 DCP2 NUDT20 decapping mRNA 2 protein-coding 0.005882 0.380117 -71(TTTACCCA,-,0.00) 561_WT_peak_1083 chr10 89102787 89102975 + 48 NA promoter-TSS (NR_024397) promoter-TSS (NR_024397) -566 NR_024397 728190 Hs.647195 NR_024397 ENSG00000223482 NUTM2A-AS1 FAM22A-AS1 NUTM2A antisense RNA 1 ncRNA 0.132979 0.735450 -85(GACTACGGCCCA,-,0.00) -67(CCCGCGGC,-,0.00) -92(TCGAGCCG,+,0.00) -55(TGCGCGGG,-,0.00) -22(GCGGGGCCAGCC,+,0.00) -74(AGCCCCGCCC,-,0.00) -29(GCCCCTGGCGGG,-,0.00) 561_WT_peak_4715 chr20 61282836 61283038 + 48 NA intron (NM_016354, intron 1 of 11) intron (NM_016354, intron 1 of 11) 9140 NM_016354 28231 Hs.235782 NM_016354 HPRD:11582 SLCO4A1 OATP-E|OATP1|OATP4A1|OATPE|OATPRP1|POAT|SLC21A12 solute carrier organic anion transporter family, member 4A1 protein-coding 0.024752 0.408867 -131(AGCCACAT,-,0.00) -140(TCTGTCGG,-,0.00) -24(CAGGTAAA,+,0.00) 561_WT_peak_1724 chr12 56511761 56512100 + 48 NA promoter-TSS (NM_032786) promoter-TSS (NM_032786) -100 NM_032786 84872 Hs.632706 NM_032786 HPRD:07860 ZC3H10 ZC3HDC10 zinc finger CCCH-type containing 10 protein-coding 0.082596 0.597059 52(GGTTCCGGGTCT,-,0.00) 113(AGGCGGCT,+,0.00) 22(CGCACGCG,-,0.00),26(CGCGTACT,+,0.00) -43(TCGTGCCT,+,0.00) 87(CGCAGGAAGCGG,+,0.00) 561_WT_peak_6534 chr6 157971265 157971464 + 48 NA intron (NM_153746, intron 2 of 8) intron (NM_153746, intron 2 of 8) 21200 NR_037463 100500899 NR_037463 MIR3692 - microRNA 3692 ncRNA 0.020101 0.515000 -163(TAGCGACC,-,0.00) 561_WT_peak_5781 chr5 66462150 66462440 + 48 NA exon (NM_015183, exon 28 of 28) exon (NM_015183, exon 28 of 28) 30322 NM_005582 4064 Hs.87205 NM_005582 HPRD:03749 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding 0.062069 0.646048 62(AAGTCTCT,+,0.00),112(AGAGGCCT,-,0.00),114(AGGCCTCT,+,0.00) 48(CGGCCCTCCCGG,+,0.00) -147(TCGAGGCC,+,0.00) -25(CCGACGGA,+,0.00) -88(GCCGCGGG,+,0.00) 12(CCCCCTCAGCCA,+,0.00) -101(CGCGGAGCGGCC,+,0.00) 26(GGGCAGAGTT,+,0.00) 561_WT_peak_46 chr1 8998570 8998771 + 48 NA Intergenic LTR77|LTR|ERV1 -7223 NM_001270500 765 Hs.100322 NM_001215 HPRD:00264 CA6 CA-VI|GUSTIN carbonic anhydrase VI protein-coding 0.009950 0.445545 -113(GGGTTTTG,-,0.00) -20(TTTACCCT,-,0.00) 561_WT_peak_3259 chr17 56065379 56065549 + 48 NA exon (NM_007146, exon 1 of 6) exon (NM_007146, exon 1 of 6) 151 NM_007146 7716 Hs.463569 NM_007146 VEZF1 DB1|ZNF161 vascular endothelial zinc finger 1 protein-coding 0.082353 0.771930 -55(CCCCCCTCCTCC,+,0.00) -64(GGCGGCCGAC,+,0.00) -93(AACGCGGTCC,-,0.00) -78(GCCTCCATGGCT,+,0.00),-76(CTCCATGGCTGC,-,0.00) 561_WT_peak_7178 chr8 144623436 144623615 + 48 NA promoter-TSS (NM_015117) promoter-TSS (NM_015117) 95 NM_015117 23144 Hs.521915 NM_015117 HPRD:15697 ZC3H3 ZC3HDC3 zinc finger CCCH-type containing 3 protein-coding 0.117318 0.700000 -76(TCCCGGCCCC,+,0.00) 1(CCGCGACG,-,0.00) 561_WT_peak_4842 chr22 20923596 20923796 + 48 NA intron (NM_001293234, intron 8 of 16) intron (NM_001293234, intron 8 of 16) 61361 NM_001293237 51586 Hs.517421 NM_015889 HPRD:12117 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding 0.020000 0.527363 561_WT_peak_3062 chr17 18315836 18316050 + 48 NA non-coding (NR_104343, exon 1 of 2) non-coding (NR_104343, exon 1 of 2) 1470 NR_104343 400579 Hs.375092 NR_104343 HPRD:13421 FLJ35934 - FLJ35934 ncRNA 0.060748 0.562791 -150(GCCGGGCG,+,0.00) -146(GGCGCGGT,-,0.00) 561_WT_peak_4015 chr2 30560059 30560302 + 48 NA Intergenic Intergenic -9332 NR_122048 285043 Hs.429119 NR_122048 LOC285043 - uncharacterized LOC285043 ncRNA 0.016461 0.565574 -131(AACCACTT,-,0.00) 49(GCCTCCCAGCCC,+,0.00) 49(GCCTCCCAGC,-,0.00) 561_WT_peak_2625 chr15 94772826 94773161 + 48 NA Intergenic Intergenic -68437 NM_001159643 55784 Hs.33368 NM_018349 HPRD:07738 MCTP2 - multiple C2 domains, transmembrane 2 protein-coding 0.008955 0.395833 561_WT_peak_4121 chr2 68993649 68993921 + 48 NA intron (NM_001007231, intron 1 of 10) intron (NM_001007231, intron 1 of 10) -8148 NM_014882 9938 Hs.531807 NM_014882 HPRD:09805 ARHGAP25 HEL-S-308|KAIA0053 Rho GTPase activating protein 25 protein-coding 0.007353 0.461538 -1(GTAACAGAAAGC,+,0.00) 561_WT_peak_5621 chr4 153021942 153022096 + 48 NA promoter-TSS (NR_121627) promoter-TSS (NR_121627) 49 NR_121627 100996286 Hs.322462 NR_121627 ENSG00000245954 LOC100996286 - uncharacterized LOC100996286 ncRNA 0.019481 0.554839 -131(AAGCGTTT,+,0.00) -121(CGGTTCTG,-,0.00) 561_WT_peak_1057 chr10 75716418 75716626 + 48 NA Intergenic Intergenic -33987 NM_001001791 414236 Hs.585453 NM_001001791 HPRD:16580 C10orf55 bA417O11.3 chromosome 10 open reading frame 55 protein-coding 0.004808 0.454545 -153(TGAACAGGAAGC,+,0.00) 561_WT_peak_4764 chr21 32725205 32725588 + 48 NA intron (NM_003253, intron 2 of 28) intron (NM_003253, intron 2 of 28) 205894 NM_003253 7074 Hs.517228 NM_003253 HPRD:02820 TIAM1 - T-cell lymphoma invasion and metastasis 1 protein-coding 0.005222 0.385417 146(CAAAACCC,+,0.00) 561_WT_peak_4084 chr2 61244846 61245047 + 48 NA exon (NM_002618, exon 1 of 4) exon (NM_002618, exon 1 of 4) 134 NM_002618 5194 Hs.161377 NM_002618 HPRD:03475 PEX13 NALD|PBD11A|PBD11B|ZWS peroxisomal biogenesis factor 13 protein-coding 0.064677 0.683168 -105(AGCCGCCA,-,0.00) -139(GGGAGCCGAGAG,+,0.00) -112(GCGTCCCAGC,-,0.00) 561_WT_peak_5148 chr3 69133927 69134167 + 48 NA promoter-TSS (NM_006407) promoter-TSS (NM_006407) -43 NM_006407 10550 Hs.518060 NM_006407 HPRD:09303 ARL6IP5 DERP11|GTRAP3-18|JWA|PRAF3|addicsin|hp22|jmx ADP-ribosylation factor-like 6 interacting protein 5 protein-coding 0.058333 0.556017 3(CCGACCGA,+,0.00) -143(CGTCTCTA,+,0.00) -2(CAAAGCCG,+,0.00) -105(GGTTCCTGTTTT,-,0.00) 58(CGCCGCCGCCGC,-,0.00),61(CGCCGCCGCCGC,-,0.00) 7(CCGAGACG,-,0.00) 561_WT_peak_3970 chr2 12997140 12997343 + 48 NA Intergenic Intergenic 119748 NR_036072 100422986 NR_036072 MIR3125 - microRNA 3125 ncRNA 0.000000 0.387255 -113(AACCACTT,-,0.00) 27(ACTTCCTGTTTT,-,0.00) 561_WT_peak_6729 chr7 75947943 75948113 + 48 NA Intergenic Intergenic 16153 NM_001540 3315 Hs.520973 NM_001540 HPRD:09076 HSPB1 CMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27 heat shock 27kDa protein 1 protein-coding 0.035294 0.654971 -138(CCGGGAGGGATG,-,0.00) -117(CCGACCTA,+,0.00) -142(TGGGCCGGGA,-,0.00) -141(GGGCCGGGAGGG,-,0.00) -55(GGGCAGGGCGGC,-,0.00) 561_WT_peak_5566 chr4 103266792 103266892 + 48 NA promoter-TSS (NM_001135147) promoter-TSS (NM_001135147) -187 NM_001135146 64116 Hs.288034 NM_022154 HPRD:12286 SLC39A8 BIGM103|LZT-Hs6|ZIP8 solute carrier family 39 (zinc transporter), member 8 protein-coding 0.030000 0.613861 -100(CGTGTCGG,+,0.00) 561_WT_peak_1404 chr11 72524577 72524950 + 48 NA promoter-TSS (NM_033388) promoter-TSS (NM_033388) -688 NM_033388 89849 Hs.653186 NM_033388 HPRD:10959 ATG16L2 ATG16B|WDR80 autophagy related 16-like 2 (S. cerevisiae) protein-coding 0.045576 0.593583 -124(AAGCGTCT,+,0.00) 130(TCGAGGCC,+,0.00) 69(TCCTCCCAGCCC,+,0.00),176(CCCTCACAGACC,+,0.00) -140(GCCGCCCA,+,0.00) -143(GACGCCGCCC,-,0.00) 561_WT_peak_7390 chr9 112910765 112910963 + 48 NA intron (NM_001004065, intron 2 of 3) intron (NM_001004065, intron 2 of 3) 23083 NM_001136562 11217 Hs.591908 NM_001004065 ENSG00000241978 AKAP2 AKAP-2|AKAPKL|PRKA2 A kinase (PRKA) anchor protein 2 protein-coding 0.025253 0.507538 561_WT_peak_4779 chr21 35320419 35320847 + 48 NA promoter-TSS (NM_001288961) promoter-TSS (NM_001288961) -597 NM_001288961 400863 Hs.729814 NM_207472 LOC400863 - uncharactered LOC400863 protein-coding 0.025701 0.494172 93(TCGACCCC,+,0.00) -43(CAGCGAGGCTGC,-,0.00) 561_WT_peak_4788 chr21 37432928 37433107 + 48 NA promoter-TSS (NM_001007261) promoter-TSS (NM_001007261) 99 NR_040087 54093 Hs.606200 NM_017438 HPRD:10743 SETD4 C21orf18|C21orf27 SET domain containing 4 protein-coding 0.078212 0.622222 -97(GCTGCGCA,+,0.00) 561_WT_peak_2073 chr13 77566294 77566534 + 48 NA intron (NM_006493, intron 1 of 3) CpG 355 NM_006493 1203 Hs.30213 NM_006493 CLN5 NCL ceroid-lipofuscinosis, neuronal 5 protein-coding 0.112500 0.730290 -13(GGCGTTGA,-,0.00) -155(GCTTCCTGGTGC,-,0.00) -139(CCCTGGCGCTGC,-,0.00),63(GCGGGGACAGCG,+,0.00) -45(GCGGCGGCGC,+,0.00) 561_WT_peak_6222 chr6 27804949 27805153 + 48 NA TTS (NM_003510) TTS (NM_003510) 1066 NM_003510 8330 Hs.734717 NM_003510 HPRD:09100 HIST1H2AK H2A/d|H2AFD histone cluster 1, H2ak protein-coding 0.019608 0.424390 561_WT_peak_938 chr10 31607487 31607773 + 48 NA promoter-TSS (NM_001174096) promoter-TSS (NM_001174096) 394 NR_024284 220930 Hs.372654 NR_024284 ZEB1-AS1 - ZEB1 antisense RNA 1 ncRNA 0.083916 0.714286 -157(GGGCTGCGCGGG,-,0.00),100(CCCTCCCTGCCC,+,0.00) -7(CGTGGGAC,+,0.00) -153(TGCGCGGG,-,0.00) 561_WT_peak_2233 chr14 58766045 58766235 + 48 NA intron (NM_002892, intron 1 of 23) CpG 918 NM_023000 5926 Hs.161000 NM_002892 HPRD:01575 ARID4A RBBP-1|RBBP1|RBP-1|RBP1 AT rich interactive domain 4A (RBP1-like) protein-coding 0.147368 0.769634 -101(GGCGGAGGCGGG,-,0.00) -86(CGGGCCGAAGTC,+,0.00) -112(GGGGGCCGAG,+,0.00) -119(GGGCCGAGGGGG,-,0.00) -132(GCGGGCCCGGGG,+,0.00),-121(GCGGGCCGAGGG,+,0.00),-94(GCGGGGCGCGGG,+,0.00) -58(CGCGGAGCGGAG,+,0.00) 561_WT_peak_5317 chr3 169684474 169684808 + 48 NA promoter-TSS (NR_027622) promoter-TSS (NR_027622) 61 NM_003262 7095 Hs.744859 NM_003262 HPRD:03706 SEC62 Dtrp1|HTP1|TLOC1|TP-1 SEC62 homolog (S. cerevisiae) protein-coding 0.101796 0.698507 -157(GGCGGCCGAC,+,0.00) -3(AAGCGGAT,+,0.00) -134(GGGCGCCAGCCG,+,0.00) 13(CAAAGCCG,+,0.00) 64(CGGGGAAA,+,0.00) -11(GACACAAGAAGC,+,0.00) -101(GGGGCGCGTT,+,0.00) 131(GCCGCGAGGC,+,0.00) -163(CCGCCAGGCGGC,-,0.00) 561_WT_peak_2277 chr14 72943535 72943758 + 48 NA intron (NM_001204420, intron 11 of 15) intron (NM_001204420, intron 11 of 15) -39882 NR_106994 102465832 NR_106994 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA 0.013453 0.464286 561_WT_peak_1088 chr10 90585149 90585318 + 48 NA intron (NM_144590, intron 4 of 5) intron (NM_144590, intron 4 of 5) 22746 NM_001128215 340654 Hs.55118 NM_001128215 ENSG00000173239 LIPM LIPL3|bA304I5.1 lipase, family member M protein-coding 0.011834 0.458824 561_WT_peak_1640 chr12 29534380 29534466 + 48 NA promoter-TSS (NM_016570) promoter-TSS (NM_016570) -280 NM_016570 51290 Hs.339453 NM_016570 ERGIC2 Erv41|PTX1|cd002 ERGIC and golgi 2 protein-coding 0.023256 0.390805 561_WT_peak_2426 chr15 36871968 36872357 + 48 NA exon (NM_001130010, exon 1 of 12) exon (NM_001130010, exon 1 of 12) 358 NM_001130010 84529 Hs.48348 NM_032499 HPRD:13650 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding 0.035990 0.566667 82(CTGGGCCGCC,-,0.00) -141(CGGCACCA,-,0.00) 50(CTCTCACAGCCC,+,0.00) -50(GTACGACG,-,0.00) 86(GCCGCCCA,+,0.00) 561_WT_peak_1892 chr12 121662541 121662705 + 48 NA intron (NR_046372, intron 6 of 12) intron (NR_046372, intron 6 of 12) 14959 NM_002560 5025 Hs.321709 NM_002560 HPRD:09017 P2RX4 P2X4|P2X4R purinergic receptor P2X, ligand-gated ion channel, 4 protein-coding 0.024390 0.551515 -98(CCGGGGAGCAGG,-,0.00) -120(CAGACCGA,+,0.00) -94(GGAGCAGGAAGC,+,0.00) 561_WT_peak_3204 chr17 43225954 43226422 + 48 NA 5' UTR (NM_006460, exon 1 of 1) 5' UTR (NM_006460, exon 1 of 1) 1504 NM_006460 10614 Hs.586945 NM_006460 HPRD:09544 HEXIM1 CLP1|EDG1|HIS1|MAQ1 hexamethylene bis-acetamide inducible 1 protein-coding 0.044872 0.588486 181(TCCTGCCG,+,0.00) 561_WT_peak_2251 chr14 62129276 62129507 + 48 NA Intergenic Intergenic -32728 NM_181054 3091 Hs.597216 NM_001530 HPRD:04517 HIF1A HIF-1A|HIF-1alpha|HIF1|HIF1-ALPHA|MOP1|PASD8|bHLHe78 hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) protein-coding 0.004329 0.478448 561_WT_peak_458 chr1 147089966 147090136 + 48 NA intron (NM_004326, intron 7 of 9) intron (NM_004326, intron 7 of 9) 52583 NM_016361 51205 Hs.562154 NM_016361 ACP6 ACPL1|LPAP|PACPL1 acid phosphatase 6, lysophosphatidic protein-coding 0.017647 0.502924 -124(CAAAAACG,+,0.00) 561_WT_peak_5608 chr4 144434891 144435064 + 48 NA non-coding (NR_104027, exon 2 of 2) non-coding (NR_104027, exon 2 of 2) 361 NM_003601 8467 Hs.558422 NM_003601 HPRD:04538 SMARCA5 ISWI|SNF2H|WCRF135|hISWI|hSNF2H SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 protein-coding 0.104046 0.712644 -66(TTGCGACG,-,0.00) -25(CGCCGGAC,+,0.00) -118(GGCGCGGC,-,0.00) -124(CGCGGAGGCGCG,+,0.00) -127(CGTCGCGG,+,0.00) 561_WT_peak_516 chr1 150535351 150535519 + 48 NA intron (NR_104133, intron 3 of 3) intron (NR_104133, intron 3 of 3) 11030 NR_036211 100422997 NR_036211 miRBase:MI0015856 MIR4257 - microRNA 4257 ncRNA 0.000000 0.538462 -78(AGGGTAAA,+,0.00) 561_WT_peak_271 chr1 66296141 66296339 + 48 NA intron (NM_002600, intron 1 of 16) L1MC3|LINE|L1 37384 NM_002600 5142 Hs.198072 NM_002600 HPRD:02528 PDE4B DPDE4|PDEIVB phosphodiesterase 4B, cAMP-specific protein-coding 0.000000 0.396985 -54(AGCCACAT,-,0.00) -25(CAAAACCA,+,0.00) 561_WT_peak_4980 chr22 50986883 50987270 + 48 NA exon (NM_138433, exon 1 of 1) exon (NM_138433, exon 1 of 1) 614 NM_138433 113730 Hs.137007 NM_138433 HPRD:14453 KLHDC7B - kelch domain containing 7B protein-coding 0.095607 0.760309 -106(GCGGCCTCCTCC,+,0.00),25(GGGGGAGGGGGG,-,0.00) 81(AGGCCCGGAAGC,+,0.00),138(GGCCCCGGAAGC,+,0.00),153(GCTCCCGGGCCC,-,0.00) 24(CGGGGGAGGGGG,-,0.00) 177(CGGCGGCAGCCC,+,0.00) -109(CCCGCGGC,-,0.00),22(GCCGGGGG,+,0.00) -142(CCCGCACAGCCC,+,0.00) -130(CCCGCGCA,+,0.00) -116(GCCTGGCCCCGC,-,0.00) -42(AAATCGCCCC,-,0.00) -6(CCGCCTCG,-,0.00),171(CCGCCACG,-,0.00) -160(GCCGCGATGCCC,+,0.00),170(CCCGCCACGGCG,+,0.00),172(CGCCACGGCGGC,-,0.00) -111(GCCCCGCGGC,-,0.00),51(GCAGCGGGGC,+,0.00) -118(CCGCCTGGCCCC,-,0.00),-14(CAGGCCGGCCGC,-,0.00) 561_WT_peak_1364 chr11 65420225 65420402 + 48 NA TTS (NM_001243984) TTS (NM_001243984) 3650 NR_039709 100616284 NR_039709 MIR4489 - microRNA 4489 ncRNA 0.118644 0.634831 -142(CGTCGGAG,+,0.00) -155(CGCCGGCGCCGC,-,0.00) -151(GGCGCCGCCC,-,0.00) -40(CCGCGACG,-,0.00) -33(GGTGCGAAGC,+,0.00) 561_WT_peak_2105 chr13 113862873 113863067 + 48 NA promoter-TSS (NM_018386) promoter-TSS (NM_018386) -8 NM_001258213 55795 Hs.508769 NM_018386 HPRD:07749 PCID2 F10 PCI domain containing 2 protein-coding 0.123711 0.738462 -69(GAGCGCCACCCC,+,0.00) -18(TCGGTCCG,-,0.00) -27(TTCCGGCCCT,+,0.00) 4(CCCCCGGC,-,0.00),15(GCCGCGGG,+,0.00) 5(CCCCGGCCCCGC,-,0.00) 10(GCCCCGCCGC,-,0.00) -161(CAACCACGCCGC,-,0.00) 561_WT_peak_7142 chr8 126103826 126104038 + 48 NA promoter-TSS (NM_173685) promoter-TSS (NM_173685) 129 NM_014846 9897 Hs.270043 NM_014846 HPRD:13786 KIAA0196 RTSC|SPG8 KIAA0196 protein-coding 0.117925 0.718310 41(AAGCGGCT,+,0.00) -110(CGCACGCG,-,0.00) -122(GCCGCGCC,+,0.00) -84(GCGGAGCCGGCA,+,0.00) -85(CGCGGAGCCGGC,+,0.00) -124(GGGCCGCGCC,+,0.00) -120(CGCGCCACGGCG,+,0.00) -129(CAGCCGGGCCGC,-,0.00) 561_WT_peak_5779 chr5 66136915 66137024 + 48 NA intron (NM_015183, intron 1 of 27) MIRb|SINE|MIR 12365 NM_015183 375449 Hs.595458 NM_015183 HPRD:14195 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding 0.000000 0.354545 561_WT_peak_252 chr1 55680758 55680989 + 48 NA promoter-TSS (NR_038320) promoter-TSS (NR_038320) 166 NM_015306 23358 Hs.477009 NM_015306 ENSG00000162402 USP24 - ubiquitin specific peptidase 24 protein-coding 0.116883 0.762931 1(GCAGCCGGGCCA,-,0.00) -87(TCCCGGGCCT,+,0.00) 4(GCCGGGCCAGGC,+,0.00) -120(GCCGCCCCGGCC,+,0.00),-83(GGGCCTGGCGGG,-,0.00) -7(GCTCCGCAGC,-,0.00) -84(CGGGCCTGGCGG,+,0.00),-79(CTGGCGGGCCGC,-,0.00),6(CGGGCCAGGCTG,+,0.00) 561_WT_peak_6943 chr8 22461961 22462516 + 48 NA promoter-TSS (NR_033902) promoter-TSS (NR_033902) 93 NR_033902 57805 Hs.744848 NM_021174 HPRD:09159 CCAR2 DBC-1|DBC1|KIAA1967|NET35|p30 DBC|p30DBC cell cycle and apoptosis regulator 2 protein-coding 0.099099 0.699640 10(CCGGGAAGGCGC,-,0.00),104(CCGGGAGAGCGG,-,0.00) 310(GGCGGCGA,-,0.00) 303(AGGGCCGGGC,-,0.00) 39(GCCGCGGG,+,0.00),306(GCCGGGCG,+,0.00) 165(CGGCAGCAGCGG,+,0.00) -35(TAGCGAGG,-,0.00) 295(GGGCTGCGAGGG,-,0.00) 22(ACTTCCGCTCCC,-,0.00),327(GGGCGCGGAAGG,+,0.00) 338(GGGCCGAGCC,+,0.00) 214(GCTGCCCTGGCC,+,0.00) 297(GCTGCGAGGG,+,0.00) 561_WT_peak_4501 chr2 234475099 234475280 + 48 NA promoter-TSS (NM_018218) promoter-TSS (NM_018218) -953 NM_018218 55230 Hs.96513 NM_018218 HPRD:07166 USP40 - ubiquitin specific peptidase 40 protein-coding 0.066298 0.692308 -17(TCGCCCTCCTCA,+,0.00) -87(TGGCCCGAAACC,+,0.00) -147(GCCGGCCGAG,+,0.00) -146(CCGGCCGA,+,0.00) 561_WT_peak_1670 chr12 47610171 47610373 + 48 NA promoter-TSS (NR_026544) promoter-TSS (NR_026544) -46 NR_026544 100233209 Hs.657722 NR_026544 ENSG00000247774 PCED1B-AS1 - PCED1B antisense RNA 1 ncRNA 0.029703 0.492611 561_WT_peak_1556 chr12 4429771 4430053 + 48 NA promoter-TSS (NM_020375) promoter-TSS (NM_020375) -447 NM_020375 57103 Hs.504545 NM_020375 C12orf5 FR2BP|TIGAR chromosome 12 open reading frame 5 protein-coding 0.049645 0.540636 6(CGACGCTA,+,0.00),14(CGTCCCTA,+,0.00) 3(GGCCGACG,-,0.00) 561_WT_peak_128 chr1 27023458 27023733 + 48 NA exon (NM_139135, exon 1 of 20) exon (NM_139135, exon 1 of 20) 1073 NM_139135 8289 Hs.468972 NM_006015 HPRD:04319 ARID1A B120|BAF250|BAF250a|BM029|C1orf4|ELD|MRD14|OSA1|P270|SMARCF1|hELD|hOSA1 AT rich interactive domain 1A (SWI-like) protein-coding 0.112727 0.742754 26(CCTCCCTCCTCC,+,0.00),44(TCCGCCTCCTCG,+,0.00) 21(AGCCGCCT,-,0.00) -58(CCGCCCGCCCCG,+,0.00),94(GGGGGGAGGCGG,-,0.00) -147(CCTACGCG,-,0.00),-45(CCTACGCG,-,0.00) -163(GGCGGGGG,+,0.00),-61(CCCCCGCC,-,0.00) -4(GGCGCGGC,-,0.00) -57(CGCCCGCCCCGG,-,0.00) -146(CTACGCGG,+,0.00) 86(GGGGCCATGGGG,+,0.00),88(GGCCATGGGGGG,-,0.00) 71(GCTCAGCAGC,-,0.00) 561_WT_peak_4972 chr22 50629779 50629994 + 48 NA intron (NM_025204, intron 1 of 9) intron (NM_025204, intron 1 of 9) 5526 NM_025204 80305 Hs.517731 NM_025204 HPRD:11450 TRABD LP6054|PP2447 TraB domain containing protein-coding 0.009302 0.523148 -21(TAGCGTCT,+,0.00) -86(GGGCCGAGGT,+,0.00) -98(GAGTCCTGGCTG,+,0.00) 561_WT_peak_1368 chr11 65625001 65625185 + 48 NA intron (NM_005507, intron 1 of 3) CpG 711 NM_005507 1072 Hs.170622 NM_005507 HPRD:03261 CFL1 CFL|HEL-S-15 cofilin 1 (non-muscle) protein-coding 0.125000 0.740541 -66(GGACCCGGCTGC,+,0.00) -60(GGCTGCCGAG,+,0.00) -147(CCGTCTTCCCAG,+,0.00),-110(CGCCCCTCCCGG,+,0.00) -123(CCGCGCCAGCAC,+,0.00) -149(CCCCGTCTTCCC,-,0.00),-111(CCGCCCCTCCCG,-,0.00) -124(GCCGCGCC,+,0.00) -129(CCCTCGCCGCGC,-,0.00) -73(CCGAGACG,-,0.00) 561_WT_peak_2582 chr15 83735638 83735988 + 48 NA promoter-TSS (NR_039740) promoter-TSS (NR_039740) -274 NR_039740 100616404 NR_039740 miRBase:MI0016881 MIR4515 - microRNA 4515 ncRNA 0.117143 0.735043 138(CTCCGCCGCC,-,0.00) -61(GCGACGCC,+,0.00),59(CCGACGCC,+,0.00) 168(AGGCCGGCGCTG,-,0.00) -63(CAGCGACG,-,0.00) 47(CCGCCTCAGCCC,+,0.00) 110(TGCGCGGT,-,0.00) -149(GCGGCGGCGGCG,+,0.00),-145(CGGCGGCGCCGC,-,0.00),17(GCGGCGGCGGCG,+,0.00),24(CGGCGGCCCCGC,-,0.00),33(CGCGGGGCCCGG,-,0.00),34(GCGGGGCCCGGC,+,0.00) -144(GGCGGCGCCGCG,+,0.00),-144(GGCGGCGCCGCG,-,0.00),25(GGCGGCCCCGCG,-,0.00),40(CCCGGCTCCGCC,-,0.00) 142(GCCGCCATCGCC,+,0.00) -146(GCGGCGGCGC,+,0.00),-105(GCTCAGCAGC,-,0.00),68(GCTCCCCAGC,-,0.00) 36(GGGGCCCGGCTC,+,0.00),150(CGCCCAGGCCGC,-,0.00) 561_WT_peak_713 chr1 208042587 208042719 + 48 NA Intergenic CpG 42030 NM_001025109 947 Hs.374990 NM_001773 HPRD:00790 CD34 - CD34 molecule protein-coding 0.098485 0.639098 -133(GCAGCCGGGCCT,-,0.00) -46(CGTCGCTA,+,0.00) -147(CGGGAAAA,+,0.00) -77(GCGGGGCGGGAG,+,0.00) -80(GCGGCGGGGC,+,0.00) -132(CAGCCGGGCCTG,-,0.00) 561_WT_peak_7595 chrX 101187160 101187358 + 48 NA promoter-TSS (NM_001282401) promoter-TSS (NM_001282401) -220 NM_001282401 84460 Hs.496512 NM_001011657 HPRD:10029 ZMAT1 - zinc finger, matrin-type 1 protein-coding 0.035354 0.482412 561_WT_peak_1530 chr11 130184982 130185170 + 47 NA promoter-TSS (NM_014155) promoter-TSS (NM_014155) -469 NM_001301098 29068 Hs.721470 NM_014155 HPRD:13692 ZBTB44 BTBD15|HSPC063|ZNF851 zinc finger and BTB domain containing 44 protein-coding 0.037234 0.513228 -20(CCCTCTCACACC,+,0.00) -96(GTGCCGATTT,+,0.00) 561_WT_peak_1139 chr10 105677685 105677771 + 47 NA intron (NM_024928, intron 1 of 9) CpG 317 NM_024928 79991 Hs.62314 NM_024928 OBFC1 AAF-44|AAF44|RPA-32|STN1|bA541N10.2 oligonucleotide/oligosaccharide-binding fold containing 1 protein-coding 0.081395 0.655172 -145(AACCGCTT,-,0.00) -115(CCCTCGCAGCCC,+,0.00) -115(CCCTCGCAGC,-,0.00) 561_WT_peak_5338 chr3 183353568 183353789 + 47 NA intron (NM_017644, intron 1 of 7) CpG 267 NM_017644 54800 Hs.407709 NM_017644 HPRD:16838 KLHL24 DRE1|KRIP6 kelch-like family member 24 protein-coding 0.072398 0.707207 -14(GGGCCCCTTT,+,0.00) 561_WT_peak_259 chr1 61784716 61784863 + 47 NA intron (NM_001145511, intron 3 of 10) intron (NM_001145511, intron 3 of 10) -65599 NR_104180 645030 Hs.632410 NR_104180 NFIA-AS1 - NFIA antisense RNA 1 ncRNA 0.000000 0.418919 561_WT_peak_2778 chr16 30389853 30389928 + 47 NA TTS (NM_013292) TTS (NM_013292) 255 NM_001214907 197407 Hs.513501 NM_152652 HPRD:15836 ZNF48 ZNF553 zinc finger protein 48 protein-coding 0.080000 0.697368 -117(TCGGTCGG,-,0.00) 561_WT_peak_5886 chr5 118610458 118610630 + 47 NA intron (NM_001077654, intron 1 of 1) intron (NM_001077654, intron 1 of 1) 6157 NM_001286815 25816 Hs.618488 NM_014350 TNFAIP8 GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2 tumor necrosis factor, alpha-induced protein 8 protein-coding 0.000000 0.421965 561_WT_peak_4552 chr20 4018956 4019171 + 47 NA Intergenic Intergenic -22847 NM_001134338 11237 Hs.589884 NM_007219 HPRD:10198 RNF24 G1L ring finger protein 24 protein-coding 0.023256 0.546296 561_WT_peak_48 chr1 9480963 9481211 + 47 NA Intergenic Intergenic 7888 NR_104623 100506022 Hs.131775 NR_104622 LOC100506022 - uncharacterized LOC100506022 ncRNA 0.004032 0.369478 561_WT_peak_7177 chr8 144373644 144373832 + 47 NA 5' UTR (NM_030895, exon 1 of 3) 5' UTR (NM_030895, exon 1 of 3) 179 NM_030895 79943 Hs.512740 NM_030895 ZNF696 - zinc finger protein 696 protein-coding 0.148936 0.767196 -141(CGCGGCCGAG,+,0.00) -24(CGTACCCG,-,0.00) -151(GGGCTGAGGGCG,-,0.00) -14(GTCCGACA,-,0.00) -143(GGCGCGGC,-,0.00),-56(GGCGCGGC,-,0.00) -12(CCGACACG,-,0.00) -114(GCCGCCGTGGCC,+,0.00) 561_WT_peak_2893 chr16 70554716 70554900 + 47 NA intron (NM_015386, intron 1 of 18) MIRb|SINE|MIR 2649 NM_015386 25839 Hs.208680 NM_015386 HPRD:08444 COG4 CDG2J|COD1 component of oligomeric golgi complex 4 protein-coding 0.010870 0.372973 -151(CGGTTTTT,-,0.00) -90(CAAACAGGAAAC,+,0.00) 561_WT_peak_2152 chr14 24780275 24780494 + 47 NA promoter-TSS (NM_001143919) promoter-TSS (NM_001143919) 192 NM_014430 27141 Hs.642693 NM_014430 HPRD:11981 CIDEB - cell death-inducing DFFA-like effector b protein-coding 0.114155 0.722727 -107(CCCGGCCGCC,-,0.00) -114(TCGCCGTCCCGG,+,0.00) -42(TCCACGCC,+,0.00) -73(CGCGTATG,+,0.00) -34(GCCGCCCA,+,0.00) 42(CGCTGGCACGGC,-,0.00) -139(GCGGTCTGGCTG,+,0.00) 561_WT_peak_2318 chr14 90085186 90085357 + 47 NA intron (NM_001085471, intron 1 of 6) intron (NM_001085471, intron 1 of 6) 223 NM_001085471 1112 Hs.434286 NM_005197 HPRD:07533 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding 0.023392 0.482558 561_WT_peak_310 chr1 89356994 89357501 + 47 NA promoter-TSS (NM_001514) promoter-TSS (NM_001514) 54 NM_001514 2959 Hs.481852 NM_001514 HPRD:08928 GTF2B TF2B|TFIIB general transcription factor IIB protein-coding 0.084813 0.580709 -69(CTGCCCGGAGGC,+,0.00) 5(AACCGGCT,+,0.00) 15(TAGACGCC,+,0.00) -133(TCCCGGCCCG,+,0.00),-33(GCCCGCCCCT,+,0.00) -157(TCCTGCCG,+,0.00) -110(CCGCTTCTCTCC,-,0.00) -125(CGTCGGCC,+,0.00) 72(AAAGCAGGAAGC,+,0.00) 561_WT_peak_686 chr1 203651933 203652129 + 47 NA 5' UTR (NM_001001396, exon 2 of 22) 5' UTR (NM_001001396, exon 2 of 22) -46678 NR_003019 677843 Hs.676135 NR_003019 SNORA77 ACA63 small nucleolar RNA, H/ACA box 77 snoRNA 0.015306 0.522843 561_WT_peak_7454 chr9 132251042 132251249 + 47 NA non-coding (NR_038955, exon 1 of 5) non-coding (NR_038955, exon 1 of 5) 206 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 - long intergenic non-protein coding RNA 963 ncRNA 0.082126 0.663462 -103(GGGGGCCGAG,+,0.00) -70(GGCTTCGA,-,0.00),-66(TCGAAGCC,+,0.00) -156(AGGGCCTGGA,-,0.00),-95(AGGGCAGGGC,-,0.00) -103(GGGGGCCGAGGG,+,0.00) -136(ATCGCGGCCC,-,0.00) 561_WT_peak_1958 chr13 25283353 25283383 + 47 NA intron (NM_001185085, intron 17 of 22) Zaphod3|DNA|hAT-Tip100 28819 NM_001185085 479 Hs.147111 NM_001676 HPRD:01667 ATP12A ATP1AL1 ATPase, H+/K+ transporting, nongastric, alpha polypeptide protein-coding 0.033333 0.612903 561_WT_peak_6890 chr7 148823773 148823945 + 47 NA promoter-TSS (NM_001001661) promoter-TSS (NM_001001661) 351 NM_020781 57541 Hs.632032 NM_020781 HPRD:18336 ZNF398 P51|P71|ZER6 zinc finger protein 398 protein-coding 0.116279 0.739884 -47(CCGGGGGCGCGG,-,0.00) -48(GCCGGGGG,+,0.00) -164(AAAGCTGCCC,-,0.00) -102(CAGCGAGGCCGG,-,0.00) 561_WT_peak_6761 chr7 98476334 98476600 + 47 NA intron (NM_001244580, intron 1 of 71) CpG 354 NM_003496 8295 Hs.203952 NM_003496 HPRD:04310 TRRAP PAF350/400|PAF400|STAF40|TR-AP|Tra1 transformation/transcription domain-associated protein protein-coding 0.131579 0.749064 -123(CGCCCCGGGATC,+,0.00) -62(TGCGGCCGAG,+,0.00) 43(CCGGGACGGCGA,-,0.00) -55(GAGCTGAGAGGA,-,0.00),84(GAGCTGAGAGGT,-,0.00) 63(GGGAACCGGAGG,+,0.00) -161(CGGCGGCTCCGC,-,0.00) -160(GGCGGCTCCGCG,-,0.00) -82(GCTGCGGGGC,+,0.00) -61(GCGGCCGAGCTG,+,0.00) 561_WT_peak_2594 chr15 89438474 89438729 + 47 NA intron (NM_178232, intron 1 of 4) CpG 169 NM_178232 145864 Hs.447530 NM_178232 HPRD:13629 HAPLN3 EXLD1|HsT19883 hyaluronan and proteoglycan link protein 3 protein-coding 0.094118 0.746094 69(TCGACGGC,+,0.00) -100(GCCCGGGCCT,+,0.00) -158(CCGCTCCCTCCC,-,0.00) -108(CCATCTCAGCCC,+,0.00) -33(GGGACCCGCAGG,+,0.00) 1(AACCCGGCCC,-,0.00) 561_WT_peak_6720-2 chr7 75039825 75039840 + 47 NA intron (NR_104013, intron 1 of 7) CpG 227 NR_033322 155400 Hs.436034 NM_001039575 NSUN5P1 NSUN5B|WBSCR20B NOP2/Sun domain family, member 5 pseudogene 1 pseudo 0.133333 0.875000 561_WT_peak_6177 chr6 26522085 26522386 + 47 NA non-coding (NR_026790, exon 1 of 1) non-coding (NR_026790, exon 1 of 1) 301 NR_026790 493812 Hs.272939 NR_026790 ENSG00000228223 HCG11 bK14H9.3 HLA complex group 11 (non-protein coding) ncRNA 0.112957 0.735099 88(GGCGGAGGGCGT,-,0.00) 122(GGCGGCCTAG,+,0.00) -164(AGGCCTCT,+,0.00) 55(CCGGGAAGCATG,-,0.00),115(CCGGGAAGGCGG,-,0.00) -31(TCCCGGCCCA,+,0.00) 1(CCCCCGCC,-,0.00) 50(GCGTGCCG,+,0.00) 129(TAGGGACG,-,0.00) 60(AAGCATGGCGGC,-,0.00) 54(GCCGGGAAGC,+,0.00) 12(CAGCCTGGACGC,-,0.00) 561_WT_peak_3410 chr18 657947 658181 + 47 NA exon (NM_001012716, exon 1 of 2) intron (NM_001071, intron 1 of 6) 276 NM_001012716 494514 Hs.274959 NM_001012716 HPRD:18668 TYMSOS C18orf56 TYMS opposite strand protein-coding 0.119658 0.702128 -32(TCGTCCTCCTCG,+,0.00) -133(GCGGGAAGGAGG,-,0.00) -158(GCCGCGGG,+,0.00),-90(GCCGGGCG,+,0.00) 10(TAGGGACG,-,0.00) -119(GGCGCGGC,-,0.00) -83(GCTGCGGACC,+,0.00) 561_WT_peak_635 chr1 179051201 179051407 + 47 NA exon (NM_022371, exon 1 of 6) exon (NM_022371, exon 1 of 6) 192 NM_022371 64222 Hs.584957 NM_022371 TOR3A ADIR|ADIR2 torsin family 3, member A protein-coding 0.111650 0.753623 -34(CCCGCGGC,-,0.00) -98(CTTCGCGG,+,0.00) -36(GCCCCGCGGC,-,0.00) 561_WT_peak_5960 chr5 140070766 140071048 + 47 NA promoter-TSS (NM_012208) promoter-TSS (NM_012208) -104 NM_001278731 23438 Hs.432560 NM_012208 HPRD:02871 HARS2 HARSL|HARSR|HO3|PRLTS2 histidyl-tRNA synthetase 2, mitochondrial protein-coding 0.078014 0.639576 -24(AGCCGCCT,-,0.00) -47(CTGCCATCCCGG,+,0.00) -96(CGCACGCG,-,0.00) 93(CGGCTCCTCCCG,-,0.00) 561_WT_peak_3486 chr18 33709494 33709787 + 47 NA promoter-TSS (NM_001242875) promoter-TSS (NM_001242875) -197 NM_001242879 55250 Hs.8739 NM_018255 HPRD:15443 ELP2 SHINC-2|STATIP1|StIP elongator acetyltransferase complex subunit 2 protein-coding 0.085324 0.697279 -154(CAGCGCCCCCGG,+,0.00) -145(CGGGGCCAGCCC,+,0.00) 3(CGTTCGCG,-,0.00) -146(CCGGGGCCAGCC,+,0.00),13(GCGGGGCCACGG,+,0.00) 7(CGCGGAGCGGGG,+,0.00) 100(GGGCGGGGCT,+,0.00) 561_WT_peak_3013 chr17 7211092 7211277 + 47 NA promoter-TSS (NM_001143762) promoter-TSS (NM_001143762) -104 NM_001143761 1984 Hs.534314 NM_001970 HPRD:02555 EIF5A EIF-5A|EIF5A1|eIF5AI eukaryotic translation initiation factor 5A protein-coding 0.151351 0.763441 7(TGGCCCGGTGAC,+,0.00) -57(CGGCGCGA,-,0.00) -139(CGGGAGAAGATG,+,0.00) -162(TGCGCGGT,-,0.00),-123(TGCGCGGG,-,0.00) -31(CGCGCGCCCCGG,-,0.00) 561_WT_peak_7586 chrX 77772750 77772926 + 47 NA Intergenic Intergenic 141987 NM_152694 203430 Hs.134873 NM_152694 HPRD:06756 ZCCHC5 Mar3|Mart3|ZHC5 zinc finger, CCHC domain containing 5 protein-coding 0.017045 0.418079 561_WT_peak_7298 chr9 74383236 74383672 + 47 NA 5' UTR (NM_001135820, exon 1 of 23) 5' UTR (NM_001135820, exon 1 of 23) 346 NM_013390 23670 Hs.494146 NM_013390 HPRD:09317 TMEM2 - transmembrane protein 2 protein-coding 0.094037 0.688787 92(TCCGCCTCCGCC,+,0.00),98(TCCGCCTCCTCC,+,0.00),104(TCCTCCTCCTCC,+,0.00),107(TCCTCCTCCTCC,+,0.00),110(TCCTCCTCCTCC,+,0.00),113(TCCTCCTCCTCC,+,0.00) -140(AGTCGCTT,-,0.00) 120(CCTCCTGCCCCG,+,0.00) 165(CCCGGAGCCGCC,+,0.00) -143(CCGAGTCG,-,0.00) 228(GGCCCGGGCGGC,-,0.00) 561_WT_peak_7368 chr9 100159625 100159824 + 47 NA promoter-TSS (NR_026847) promoter-TSS (NR_026847) -751 NR_026847 286359 Hs.132262 NM_182600 LOC286359 - uncharacterized LOC286359 ncRNA 0.005025 0.470000 -151(AGGTGTCT,+,0.00),-56(AAGTGGTT,+,0.00) 561_WT_peak_1830 chr12 104350953 104351135 + 47 NA promoter-TSS (NM_001135570) promoter-TSS (NM_001135570) -51 NM_001135570 728568 Hs.42547 NM_001135570 ENSG00000204954 C12orf73 - chromosome 12 open reading frame 73 protein-coding 0.087912 0.628415 -146(CGAGCAGGCCGG,-,0.00) 0(CTTTCTCAGCCC,+,0.00) 561_WT_peak_733 chr1 220267602 220267776 + 47 NA exon (NM_018060, exon 1 of 23) exon (NM_018060, exon 1 of 23) 234 NM_018060 55699 Hs.262823 NM_018060 HPRD:13334 IARS2 ILERS isoleucyl-tRNA synthetase 2, mitochondrial protein-coding 0.086207 0.662857 -75(GTCTCCGGGGCC,-,0.00) -95(AGAGGCTT,-,0.00) -133(CCGCCTTCCCTG,+,0.00) -103(GGCGACGA,-,0.00) -82(GCGGTCGG,-,0.00) 561_WT_peak_5532 chr4 84205436 84205681 + 47 NA intron (NM_015697, intron 1 of 6) CpG 509 NM_015697 27235 Hs.144304 NM_015697 HPRD:13062 COQ2 CL640|COQ10D1|MSA1 coenzyme Q2 4-hydroxybenzoate polyprenyltransferase protein-coding 0.093878 0.670732 10(CGACTCGGAGGC,+,0.00) 47(CCGCCCGCCCGC,+,0.00) 2(CGCGGAGCCGAC,+,0.00) 9(CCGACTCG,-,0.00),10(CGACTCGG,+,0.00) 561_WT_peak_2264 chr14 68283094 68283268 + 47 NA intron (NM_015346, intron 1 of 41) intron (NM_015346, intron 1 of 41) 125 NM_015346 23503 Hs.98041 NM_015346 HPRD:15734 ZFYVE26 FYVE-CENT|SPG15 zinc finger, FYVE domain containing 26 protein-coding 0.045977 0.617143 561_WT_peak_6720 chr7 75039372 75039763 + 47 NA promoter-TSS (NR_033322) promoter-TSS (NR_033322) -38 NR_104013 155400 Hs.436034 NM_001039575 NSUN5P1 NSUN5B|WBSCR20B NOP2/Sun domain family, member 5 pseudogene 1 pseudo 0.089514 0.650510 160(AGCCGCCA,-,0.00) 151(GGCGTGGA,-,0.00) 60(GGCGGGGG,+,0.00) -50(CGTCGCAC,+,0.00) 61(GCGGGGGCAGAG,+,0.00) 161(GCCGCCAGGGCT,+,0.00) -94(GGCTCGCAGC,-,0.00) 561_WT_peak_3341 chr17 73267468 73267670 + 47 NA promoter-TSS (NM_020679) promoter-TSS (NM_020679) 189 NR_036520 100287042 Hs.514470 NR_036520 ENSG00000263843 LOC100287042 - uncharacterized LOC100287042 ncRNA 0.103960 0.743842 -127(GTGTCCGGGCCC,-,0.00) -70(CAGCCCTCCCCG,+,0.00) -44(TGGGCCGGGA,-,0.00) -114(CGCCGGAC,+,0.00) -148(TTCACCCG,-,0.00) -21(TGCGCGGC,-,0.00) -114(CGCCGGACCCGC,-,0.00),-85(GCGTGGCCCCGC,-,0.00) -23(GCTGCGCGGC,+,0.00) 561_WT_peak_274 chr1 67390809 67390979 + 47 NA promoter-TSS (NM_207014) promoter-TSS (NM_207014) 316 NM_001146112 57708 Hs.605432 NM_020948 HPRD:11362 MIER1 ER1|MI-ER1 mesoderm induction early response 1, transcriptional regulator protein-coding 0.064706 0.649123 -60(CCGGGGAGGGGC,-,0.00) -107(CCTTCCCCTCCC,-,0.00) 561_WT_peak_2403 chr15 22462119 22462346 + 47 NA Intergenic Intergenic 48770 NR_028067 390539 Hs.666555 NR_028067 ENSG00000259435 OR4N3P OR15-2 olfactory receptor, family 4, subfamily N, member 3 pseudogene pseudo 0.013216 0.622807 -117(GGGCCCCTTT,+,0.00) 561_WT_peak_2096 chr13 111268633 111268701 + 47 NA intron (NM_018210, intron 1 of 9) CpG 736 NM_018210 55739 Hs.408324 NM_018210 HPRD:07698 CARKD LP3298 carbohydrate kinase domain containing protein-coding 0.044118 0.550725 561_WT_peak_7590 chrX 100306575 100306990 + 47 NA 5' UTR (NM_001167972, exon 1 of 13) 5' UTR (NM_001167972, exon 1 of 13) 323 NM_001167971 79979 Hs.496501 NM_024917 HPRD:06520 TRMT2B CXorf34|dJ341D10.3 tRNA methyltransferase 2 homolog B (S. cerevisiae) protein-coding 0.077108 0.612981 -69(CCTGCCTCCTCC,+,0.00) 241(TCGACTCC,+,0.00) -116(CGTACACG,-,0.00),160(CGCACGCG,-,0.00) 114(CGGGGAAA,+,0.00) -94(CCGTCGGGTCCC,-,0.00) -104(TGCGCAGT,-,0.00) 561_WT_peak_1172 chr10 135121913 135122358 + 47 NA promoter-TSS (NM_145806) promoter-TSS (NM_145806) -288 NM_145806 118472 Hs.422113 NM_145806 HPRD:15812 ZNF511 - zinc finger protein 511 protein-coding 0.107865 0.726457 -28(CGACCCGGCTTC,+,0.00),10(CGACCCGGAGGC,+,0.00) -24(CCGGCTTCCCAG,+,0.00) 260(GAGCCACAGCCC,+,0.00) 230(CGCGTTCG,+,0.00) -14(AGGGCTGGGA,-,0.00) 52(GCCGCGGG,+,0.00) 5(CGGGACGA,-,0.00),48(TCGGGCCG,+,0.00) -13(GGGCTGGGAGGG,-,0.00),21(CCCGCTCCGCCC,+,0.00) 271(CCCGCGCA,+,0.00) 52(GCCGCGGGGC,+,0.00) 189(CGGGCCTGGCAG,+,0.00) 561_WT_peak_4025 chr2 37311206 37311378 + 47 NA promoter-TSS (NM_174931) promoter-TSS (NM_174931) 193 NM_019024 54497 Hs.744084 NM_019024 HPRD:11145 HEATR5B - HEAT repeat containing 5B protein-coding 0.081395 0.578035 -8(CGTCGGAC,+,0.00) -159(CGGGGAAA,+,0.00) -99(CGAGGCGG,+,0.00) 561_WT_peak_1742 chr12 58165663 58165857 + 47 NA promoter-TSS (NM_015433) promoter-TSS (NM_015433) 154 NM_005371 4234 Hs.42957 NM_005371 HPRD:06834 METTL1 C12orf1|TRM8|TRMT8|YDL201w methyltransferase like 1 protein-coding 0.061856 0.641026 -105(CCGCCCTCCTCT,+,0.00) -55(TCCGCCATGGGG,+,0.00) 561_WT_peak_3284 chr17 58498740 58498953 + 47 NA Intergenic CpG -1019 NM_181707 124773 Hs.129312 NM_181707 HPRD:14029 C17orf64 - chromosome 17 open reading frame 64 protein-coding 0.070423 0.658879 27(AGGTGGCT,+,0.00) -116(AGGCCCGGGC,-,0.00) -109(GGCCGACG,-,0.00) -34(CCGGGCCCAGAG,+,0.00) -42(AACTGGGCCC,-,0.00) 561_WT_peak_7550 chrX 52963909 52964113 + 47 NA Intergenic CpG 21618 NM_001099684 727866 Hs.6451 NM_001099684 ENSG00000179304 FAM156B TMEM29B family with sequence similarity 156, member B protein-coding 0.078431 0.604878 -25(GGCGGAAGGCGA,-,0.00) -156(CTCGCCCGCC,-,0.00) -118(AGCCGGTT,-,0.00) -103(CAGGGAAGGAGG,-,0.00) -55(GGGCAGCGTT,+,0.00) 561_WT_peak_6972 chr8 30601546 30601798 + 47 NA promoter-TSS (NM_001282199) promoter-TSS (NM_001282199) -10 NM_001282199 7993 Hs.153678 NM_005671 UBXN8 D8S2298E|REP8|UBXD6 UBX domain protein 8 protein-coding 0.079365 0.608696 -69(CTTCCTTCCCGG,+,0.00) -43(AGGGGCGGGC,-,0.00) -90(CCCGCGGC,-,0.00) -86(CGGCAAGA,-,0.00) -60(CGGAAAACGCGG,+,0.00),-47(CGGAAGGGGCGG,+,0.00) -55(AACGCGGCCG,-,0.00) -9(GCCACCATGGCT,+,0.00) -97(CAGCCGGCCCGC,-,0.00) 561_WT_peak_2081 chr13 92001325 92001631 + 47 NA intron (NR_027349, intron 1 of 3) intron (NR_027349, intron 1 of 3) -1381 NR_029487 406952 NR_029487 miRBase:MI0000071 MIR17 MIR17-5p|MIR91|MIRN17|MIRN91|hsa-mir-17|miR-17|miR17-3p|miRNA17|miRNA91 microRNA 17 ncRNA 0.058824 0.576547 -108(GCTGCCGGCCCG,-,0.00) -159(TGGCGGCT,+,0.00) -158(GGCGGCTACGCG,-,0.00),-140(CGCAGGGCCGCG,+,0.00) -136(GGGCCGCGCT,+,0.00) -153(CTACGCGG,+,0.00),-85(CGTGGCGG,+,0.00) -164(CCCCCTGGCGGC,-,0.00) 561_WT_peak_2557 chr15 75642342 75642564 + 47 NA intron (NM_001256552, intron 2 of 9) intron (NM_001256552, intron 2 of 9) 2493 NR_046311 79661 Hs.512732 NM_024608 HPRD:12314 NEIL1 FPG1|NEI1|hFPG1 nei endonuclease VIII-like 1 (E. coli) protein-coding 0.018018 0.578475 561_WT_peak_6487 chr6 137144009 137144190 + 47 NA intron (NM_000288, intron 1 of 9) CpG 397 NM_000288 5191 Hs.280932 NM_000288 HPRD:03454 PEX7 PBD9B|PTS2R|RCDP1|RD peroxisomal biogenesis factor 7 protein-coding 0.077348 0.593407 -124(TCCACGCC,+,0.00),-47(GGAGTCGA,-,0.00) -130(CGCGGGTCCACG,-,0.00) 561_WT_peak_4020 chr2 32582326 32582703 + 46 NA exon (NM_016252, exon 1 of 74) exon (NM_016252, exon 1 of 74) 418 NM_016252 57448 Hs.150107 NM_016252 HPRD:05731 BIRC6 APOLLON|BRUCE baculoviral IAP repeat containing 6 protein-coding 0.116711 0.735450 198(AGGCCCGGAAGC,+,0.00) -117(GGCGGCCGGG,+,0.00) 81(CCGGGCGGGCGC,-,0.00) -67(GCGACGCC,+,0.00),-25(TCAACGCC,+,0.00),20(TCGACGGC,+,0.00) 161(AGGGCAGGGC,-,0.00) -129(GGCGGGGG,+,0.00),-123(GGCGGGGG,+,0.00),-1(GCCGCGGG,+,0.00),80(GCCGGGCG,+,0.00) -9(CGTCACTA,+,0.00) 98(CGGGGAAA,+,0.00) -153(CTCGGGCCCCGG,-,0.00),-128(GCGGGGGCGGGG,+,0.00),-122(GCGGGGGCGGCC,+,0.00),80(GCCGGGCGGGCG,+,0.00) 90(CGCGAAGCCGGG,+,0.00) 136(CGACTCGG,+,0.00) 561_WT_peak_3286 chr17 59216664 59216850 + 46 NA intron (NM_017679, intron 22 of 23) intron (NM_017679, intron 22 of 23) 260210 NR_125749 103689912 Hs.410998 NR_125749 TBX2-AS1 - TBX2 antisense RNA 1 ncRNA 0.016129 0.454545 -84(TGGTTTTG,-,0.00) 561_WT_peak_6519 chr6 151773340 151773597 + 46 NA promoter-TSS (NM_017909) promoter-TSS (NM_017909) 75 NM_001286562 79624 Hs.15929 NM_024573 HPRD:09854 C6orf211 - chromosome 6 open reading frame 211 protein-coding 0.081712 0.585271 -43(TCGCCCTCCGCT,+,0.00) -124(TCTTCCGCTCCC,-,0.00) -35(CGCTGGCCCCGC,-,0.00) -139(CGCGTCGCCGCG,+,0.00),-139(CGCGTCGCCGCG,-,0.00) -140(CCGCGTCG,-,0.00) -138(GCGTCGCCGC,-,0.00) 561_WT_peak_2349 chr14 96857569 96857971 + 46 NA promoter-TSS (NM_152327) promoter-TSS (NM_152327) -678 NM_152327 122481 Hs.667462 NM_152327 HPRD:10640 AK7 AK 7 adenylate kinase 7 protein-coding 0.072139 0.607940 90(AGAGGCCT,-,0.00) -36(TCGCTCGG,-,0.00) -41(TAGCGTCG,-,0.00),-38(CGTCGCTC,+,0.00) -81(CGGCGGAC,+,0.00) 148(CGGGTCAA,+,0.00) -88(GCTGAGCCGGCG,+,0.00) 80(CGTGTCGG,+,0.00) 8(TCTTCGCAGC,-,0.00) 561_WT_peak_6955 chr8 28269469 28269957 + 46 NA Intergenic CpG -25736 NM_018660 55893 Hs.435535 NM_018660 HPRD:11711 ZNF395 HDBP-2|HDBP2|HDRF-2|PBF|PRF-1|PRF1|Si-1-8-14 zinc finger protein 395 protein-coding 0.110656 0.770961 25(AGGCCGCT,+,0.00) -110(CCTCCCTGCCGG,+,0.00),-77(CCGGGAGGGCGC,-,0.00),210(CGGGGGAGGCTG,-,0.00) -138(GCCCGGGCCT,+,0.00),-81(GGGGCCGGGA,-,0.00) 13(CCCCCGCC,-,0.00) -133(GGCCTGGGAGGG,-,0.00),-80(GGGCCGGGAGGG,-,0.00) 173(CCAAACCG,+,0.00) -70(GGCGCGGC,-,0.00) 2(GGGCAGGGCGCC,-,0.00),78(GGCCATGCCTGC,-,0.00) 20(CTCCCAGGCCGC,-,0.00) 561_WT_peak_1885 chr12 120933872 120934257 + 46 NA promoter-TSS (NR_038854) promoter-TSS (NR_038854) 205 NM_001037495 8655 Hs.5120 NM_003746 HPRD:03334 DYNLL1 DLC1|DLC8|DNCL1|DNCLC1|LC8|LC8a|PIN|hdlc1 dynein, light chain, LC8-type 1 protein-coding 0.088312 0.678756 111(CCGGGGTGGGGG,-,0.00) 87(GGCGTCGT,-,0.00) 193(GCGACCGA,+,0.00) 91(TCGTCCCG,+,0.00) -101(TAGCGACG,-,0.00) -110(CGGTTTCG,-,0.00) 139(GGCGCGGC,-,0.00) -5(GGGGGGCCAGGG,+,0.00) 139(GGCGCGGCCC,-,0.00) -151(CTAGGCGG,+,0.00),51(CCGCGTAG,-,0.00) -37(CGGCCAGCCCCC,-,0.00) 561_WT_peak_6947 chr8 23087938 23088062 + 46 NA non-coding (NR_033928, exon 3 of 3) non-coding (NR_033928, exon 3 of 3) 5266 NR_033928 389641 Hs.591835 NR_033928 ENSG00000246582 LOC389641 - uncharacterized LOC389641 ncRNA 0.008065 0.392000 561_WT_peak_1910 chr12 123718011 123718212 + 46 NA promoter-TSS (NM_001143905) promoter-TSS (NM_001143905) 83 NM_001194995 91574 Hs.319128 NM_152269 HPRD:08791 C12orf65 COXPD7|SPG55 chromosome 12 open reading frame 65 protein-coding 0.079602 0.603960 -122(GGGCACGA,-,0.00) -5(TTTTCCCG,-,0.00),30(TTTACCTG,-,0.00) -68(CCTACGGCTGCC,-,0.00) -117(CGAGTCGG,+,0.00) 561_WT_peak_1499 chr11 118187447 118187847 + 46 NA TTS (NM_000733) TTS (NM_000733) 12352 NM_000733 916 Hs.3003 NM_000733 HPRD:08923 CD3E IMD18|T3E|TCRE CD3e molecule, epsilon (CD3-TCR complex) protein-coding 0.025000 0.581047 -137(AGCCGCCT,-,0.00) 186(CCCCCTCAGCCT,+,0.00) 561_WT_peak_2777 chr16 30205387 30205701 + 46 NA promoter-TSS (NM_001031827) promoter-TSS (NM_001031827) 83 NM_001039182 654483 Hs.647333 NM_001039182 ENSG00000169627 BOLA2B BOLA2 bolA family member 2B protein-coding 0.092357 0.701587 66(CCGGGAGGAAGG,-,0.00) -103(GGCGTCTA,-,0.00) -124(GCGAGGCCAGGG,+,0.00),9(GCGGGGCCTGGC,+,0.00),91(GCGGACCCCGCG,+,0.00) -65(GGGCCGCGTC,+,0.00) -120(GGCCAGGGCGCT,-,0.00) -127(GCGGCGAGGC,+,0.00) 11(GGGGCCTGGCGG,+,0.00) 561_WT_peak_7578 chrX 71401169 71401554 + 46 NA promoter-TSS (NM_001170747) promoter-TSS (NM_001170747) -165 NM_001170747 5303 Hs.655623 NM_006223 HPRD:02219 PIN4 EPVH|PAR14|PAR17 protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) protein-coding 0.062338 0.603627 89(AAGCGTCT,+,0.00),200(ATGCGGCT,+,0.00) -132(GGCGCCGA,-,0.00),-42(GGCGTAGA,-,0.00) -137(GAGCTGGCGCCG,-,0.00) -87(CGCACGCG,-,0.00) -91(ACTGCGCA,+,0.00) -159(GGCGGCCCCGCG,-,0.00) 561_WT_peak_7613 chrX 133305643 133305884 + 46 NA Intergenic CpG -1455 NR_029523 406899 NR_029523 miRBase:MI0000113 MIR106A MIRN106A|mir-106 microRNA 106a ncRNA 0.078838 0.590909 -20(CTCAGCCGCC,-,0.00) -29(TCGTGCAG,+,0.00) 51(CAAAAACG,+,0.00) 561_WT_peak_6529 chr6 157421616 157421620 + 46 NA intron (NM_020732, intron 6 of 19) intron (NM_020732, intron 6 of 19) -320753 NR_039676 100616154 NR_039676 miRBase:MI0016817 MIR4466 - microRNA 4466 ncRNA 0.000000 0.400000 561_WT_peak_4413 chr2 197024966 197025179 + 46 NA intron (NM_004226, intron 2 of 7) intron (NM_004226, intron 2 of 7) 11264 NM_004226 9262 Hs.88297 NM_004226 HPRD:05289 STK17B DRAK2 serine/threonine kinase 17b protein-coding 0.009390 0.383178 561_WT_peak_4868 chr22 29598817 29599068 + 46 NA Intergenic Intergenic -2959 NM_133455 129080 Hs.289106 NM_133455 HPRD:09936 EMID1 EMI5|EMU1 EMI domain containing 1 protein-coding 0.047809 0.630952 -87(AAACGCTT,-,0.00) -23(CGGTTGTG,-,0.00) 561_WT_peak_6600 chr7 17301100 17301148 + 46 NA Intergenic Intergenic -37152 NM_001621 196 Hs.171189 NM_001621 HPRD:02596 AHR bHLHe76 aryl hydrocarbon receptor protein-coding 0.000000 0.346939 561_WT_peak_6622 chr7 25164628 25164798 + 46 NA intron (NM_018947, intron 1 of 2) CpG 267 NM_018947 54205 Hs.437060 NM_018947 CYCS CYC|HCS|THC4 cytochrome c, somatic protein-coding 0.094118 0.684211 -147(AAGCCGTT,+,0.00) -128(TCGGTCTG,-,0.00),-46(TCGGTCGC,-,0.00) -99(TCCCCGCCCT,+,0.00) -162(GCTCCGCCGC,-,0.00) 561_WT_peak_5749 chr5 54040234 54040450 + 46 NA promoter-TSS (NR_104658) promoter-TSS (NR_104658) -256 NR_104658 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA 0.009259 0.400922 -54(GCTTCCTGTTTA,-,0.00) 561_WT_peak_2959 chr16 89790095 89790274 + 46 NA intron (NR_110126, intron 4 of 10) intron (NR_110126, intron 4 of 10) 2232 NM_001113525 92822 Hs.290154 NM_152287 HPRD:12235 ZNF276 CENP-Z|CENPZ|ZADT|ZFP276|ZNF477 zinc finger protein 276 protein-coding 0.005587 0.611111 561_WT_peak_1094 chr10 93668626 93668837 + 46 NA 5' UTR (NM_152429, exon 2 of 2) 5' UTR (NM_152429, exon 2 of 2) 527 NM_152429 143282 Hs.466120 NM_152429 HPRD:08499 FGFBP3 C10orf13|FGF-BP3 fibroblast growth factor binding protein 3 protein-coding 0.090047 0.650943 -105(CAGCGACG,-,0.00),-93(CAGCGACG,-,0.00) -143(CGAGCAGCCGCG,+,0.00) 561_WT_peak_4867 chr22 29305466 29305531 + 46 NA intron (NM_001206998, intron 1 of 8) intron (NM_001206998, intron 1 of 8) -7879 NM_032173 84133 Hs.604200 NM_032173 ENSG00000183579 ZNRF3 BK747E2.3|RNF203 zinc and ring finger 3 protein-coding 0.000000 0.409091 561_WT_peak_7514 chrX 24043669 24043939 + 46 NA intron (NM_030624, intron 1 of 3) CpG-27799 1499 NM_030624 80311 Hs.495854 NM_030624 ENSG00000174010 KLHL15 HEL-S-305 kelch-like family member 15 protein-coding 0.118519 0.763838 59(GCTGCCGGCCCG,-,0.00) 19(CGGGGAAGGCTG,-,0.00) -118(GGGGGCCAGCCC,+,0.00) 86(CCCACCGA,+,0.00) 38(CCCGCGGC,-,0.00) -145(CCCCCTCGGCCC,+,0.00) 40(CGCGGCGCCCCG,+,0.00),40(CGCGGCGCCCCG,-,0.00) 68(CCGCCACG,-,0.00) -106(GTGGCCTGGCGG,+,0.00),51(GCGTCCCGGCTG,+,0.00),60(CTGCCGGCCCGC,-,0.00) 561_WT_peak_4948 chr22 42466594 42466765 + 46 NA 5' UTR (NM_000262, exon 1 of 9) 5' UTR (NM_000262, exon 1 of 9) 167 NM_000262 4668 Hs.75372 NM_000262 HPRD:00076 NAGA D22S674|GALB N-acetylgalactosaminidase, alpha- protein-coding 0.081871 0.697674 -52(CCGGGTTCCCGC,+,0.00) -29(CAAAACCG,+,0.00) -157(CCTTCGGCCCCG,-,0.00),-41(CCCTGGGCTCCC,-,0.00) -135(GAAAAAGGCAGC,+,0.00) -163(GGGCCGCCTT,+,0.00),-91(GGGCGGGGCT,+,0.00) -45(CCCGCCCTGGGC,+,0.00) -81(GCGGCCAGGCTC,+,0.00) 561_WT_peak_588 chr1 161431815 161432165 + 46 NA Intergenic CpG -43215 NM_021642 2212 Hs.352642 NM_021642 HPRD:00906 FCGR2A CD32|CD32A|CDw32|FCG2|FCGR2|FCGR2A1|FcGR|IGFR2 Fc fragment of IgG, low affinity IIa, receptor (CD32) protein-coding 0.111429 0.706553 -153(GAACCCGGGCCG,-,0.00) -97(AGGCGGCT,+,0.00) 99(CCTCCTTCCCCG,+,0.00) 22(GCGACGCC,+,0.00) 20(CCGCGACG,-,0.00),153(CCGCGACG,-,0.00) 138(GCTGCGACGC,+,0.00) 561_WT_peak_5967 chr5 141488852 141489178 + 46 NA intron (NM_030571, intron 1 of 7) intron (NM_030571, intron 1 of 7) 691 NM_030571 80762 Hs.9788 NM_030571 HPRD:14816 NDFIP1 N4WBP5 Nedd4 family interacting protein 1 protein-coding 0.042945 0.480122 -117(GGCATCGA,-,0.00) 561_WT_peak_5924 chr5 134073629 134073732 + 46 NA promoter-TSS (NM_001745) promoter-TSS (NM_001745) -490 NM_001745 819 Hs.529846 NM_001745 HPRD:03073 CAMLG CAML calcium modulating ligand protein-coding 0.029126 0.471154 -116(CGGTTTTC,-,0.00) 561_WT_peak_1843 chr12 108962650 108962855 + 46 NA 3' UTR (NM_014301, exon 6 of 6) 3' UTR (NM_014301, exon 6 of 6) 7513 NM_001301141 23479 Hs.615131 NM_014301 HPRD:14828 ISCU 2310020H20Rik|HML|ISU2|NIFU|NIFUN|hnifU iron-sulfur cluster assembly enzyme protein-coding 0.024390 0.495146 -45(AAGCCGCT,+,0.00),-44(AGCCGCTT,-,0.00) -161(GAAACAAGAACC,+,0.00) 561_WT_peak_5511 chr4 78776011 78776092 + 46 NA Intergenic Intergenic -7754 NM_020236 65008 Hs.532019 NM_020236 ENSG00000169288 MRPL1 BM022|L1MT|MRP-L1 mitochondrial ribosomal protein L1 protein-coding 0.024691 0.365854 561_WT_peak_921 chr10 27149214 27149343 + 46 NA intron (NM_001178116, intron 1 of 11) CpG 738 NM_001012750 10006 Hs.508148 NM_005470 HPRD:04336 ABI1 ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 abl-interactor 1 protein-coding 0.085271 0.723077 -155(TCCCTGCCCT,+,0.00) -96(GGCGCGGC,-,0.00) 561_WT_peak_7020 chr8 53626465 53627030 + 46 NA 5' UTR (NM_014781, exon 1 of 24) 5' UTR (NM_014781, exon 1 of 24) 279 NM_001083617 9821 Hs.196102 NM_014781 HPRD:06019 RB1CC1 ATG17|CC1|FIP200|PPP1R131 RB1-inducible coiled-coil 1 protein-coding 0.130973 0.749117 136(CCGGCGTCCCGG,+,0.00) -9(GGCGGCGA,-,0.00),359(TCGACTCC,+,0.00) 146(GGGCGCCCGCCC,+,0.00) -100(CCGACCGG,+,0.00) 52(CCCCCGGC,-,0.00),239(GCCGGGGG,+,0.00) 56(CGGCACCA,-,0.00) 59(CACCATCTTCCG,-,0.00) 128(CACAACCG,+,0.00) 1(CTTACCCG,-,0.00) 101(ACCGCCCA,+,0.00) 39(GCAGAGCCAGCG,+,0.00) -114(GGGCCGGGCT,+,0.00) 74(CCGCCTAG,-,0.00) 257(GCGGCCTGTCAG,+,0.00) 561_WT_peak_4088 chr2 61765997 61766176 + 46 NA promoter-TSS (NM_003400) promoter-TSS (NM_003400) -668 NM_003400 7514 Hs.370770 NM_003400 HPRD:03975 XPO1 CRM1|emb|exp1 exportin 1 protein-coding 0.078212 0.644444 -162(CTCGGCCGGC,-,0.00) -161(TCGGCCGG,-,0.00) -51(CAGTTTTG,-,0.00) -146(CCACCGGCTCCC,-,0.00) -100(GGATCCGCCC,-,0.00),-81(GGGCTGCGTT,+,0.00) -160(CGGCCGGCCCGC,-,0.00) 561_WT_peak_4168 chr2 85632817 85632988 + 46 NA intron (NM_001256139, intron 1 of 9) intron (NM_001256139, intron 1 of 9) 4918 NM_001256140 822 Hs.516155 NM_001747 HPRD:01088 CAPG AFCP|HEL-S-66|MCP capping protein (actin filament), gelsolin-like protein-coding 0.023392 0.552326 -40(GCAACAGGCAGC,+,0.00) 561_WT_peak_7473 chr9 136202877 136203216 + 46 NA promoter-TSS (NM_006753) promoter-TSS (NM_006753) 1 NM_001278942 6838 Hs.274430 NM_006753 HPRD:01714 SURF6 RRP14 surfeit 6 protein-coding 0.126844 0.717647 37(AGCCGCCA,-,0.00) 11(GGGCAGGCGCGG,-,0.00) -163(CGCGTGCG,+,0.00),-161(CGTGCGCG,-,0.00),-29(CGCGTGCG,+,0.00) 16(GGCGCGGC,-,0.00) 32(CGCCGAGCCGCC,+,0.00) -79(GAGGCCATGGCG,+,0.00),-77(GGCCATGGCGGA,-,0.00) 39(CCGCCAGCCCGC,-,0.00) 561_WT_peak_5460 chr4 47533801 47533986 + 46 NA intron (NM_020453, intron 5 of 22) intron (NM_020453, intron 5 of 22) 46483 NM_020453 57205 Hs.437241 NM_020453 HPRD:16518 ATP10D ATPVD ATPase, class V, type 10D protein-coding 0.010811 0.526882 561_WT_peak_257 chr1 59369537 59369840 + 46 NA Intergenic CpG -116460 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA 0.095710 0.707237 -124(GAGTCCGGCCCT,-,0.00) 88(ATGCGGCT,+,0.00) 3(GCGGCCTCCCGG,+,0.00) -103(CGGGCAGGGA,-,0.00),9(TCCCGGCCCG,+,0.00) -154(GCCGGGCG,+,0.00) -50(AACGCGCCCC,-,0.00) 561_WT_peak_2723 chr16 21530400 21530629 + 46 NA non-coding (NR_002594, exon 1 of 1) non-coding (NR_002594, exon 1 of 1) 1251 NR_002594 387254 Hs.448808 NR_002594 SLC7A5P2 IMAA|MMAA solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2 pseudo 0.008734 0.504348 561_WT_peak_2044 chr13 49107060 49107254 + 46 NA intron (NM_001286830, intron 1 of 13) CpG 235 NM_001268 1102 Hs.652712 NM_001268 HPRD:04631 RCBTB2 CHC1L|RLG regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 protein-coding 0.092784 0.717949 -94(CTCGGCCTCC,-,0.00) -159(GGGCGGGGAGGG,-,0.00) 4(CCCGGCGCCGCG,+,0.00),4(CCCGGCGCCGCG,-,0.00) 561_WT_peak_6668 chr7 45808238 45808932 + 46 NA promoter-TSS (NR_024271) promoter-TSS (NR_024271) 32 NR_024271 641977 Hs.723477 NR_024271 ENSG00000214765 SEPT7P2 SEPT13|SEPT7B septin 7 pseudogene 2 pseudo 0.090778 0.640288 68(GGCGGCCGGG,+,0.00) 112(AGCCGGTT,-,0.00) 302(GCGACGCC,+,0.00) -107(CAGCTGGCGCTG,-,0.00) 325(CGCCTACG,+,0.00) 11(CGCCCGGC,-,0.00),126(CGCCCGGC,-,0.00) 27(CCGAGAAG,-,0.00),300(CCGCGACG,-,0.00),509(CGAGGCGG,+,0.00) 105(GCTCAGCAGC,-,0.00) 69(GCGGCCGGGCCG,+,0.00) 561_WT_peak_5613 chr4 148721109 148721296 + 46 NA intron (NM_024605, intron 1 of 22) L1MDb|LINE|L1 17456 NR_039962 100616246 NR_039962 MIR4799 - microRNA 4799 ncRNA 0.010695 0.521277 -39(ATGCCGCT,+,0.00) 561_WT_peak_5913 chr5 132298884 132299743 + 46 NA promoter-TSS (NM_014423) promoter-TSS (NM_014423) 41 NM_014423 27125 Hs.519313 NM_014423 HPRD:09187 AFF4 AF5Q31|MCEF AF4/FMR2 family, member 4 protein-coding 0.110594 0.739535 59(GGCCTCGA,-,0.00),78(GGCGTCGG,-,0.00),234(GGCGGCGA,-,0.00),400(GCGACGCC,+,0.00) -23(CGGACGCG,-,0.00),504(CGCGTCCG,+,0.00) -115(TCTGTCGG,-,0.00),144(ACGGTCGG,-,0.00),463(CCGCCCGA,+,0.00) -137(GCCCGGCCCG,+,0.00),-132(GCCCGGCCCT,+,0.00),389(TGGGCCGGGA,-,0.00),593(AGGGCGGGGC,-,0.00) -143(CCCGCGGC,-,0.00),44(GGCGGGGG,+,0.00),179(GGCGGGGG,+,0.00),368(GGCGGGGG,+,0.00) 303(CAAGACCG,+,0.00),622(CGGTTCTG,-,0.00) 187(CGGGTTAA,+,0.00) 76(GCGGCGTCGGCG,+,0.00),88(GCGGCGGCAGCG,+,0.00),121(CGTAGGCCCCGC,-,0.00),227(CGCTGGCGGCGG,-,0.00),596(GCGGGGCCGGGC,+,0.00) -90(CCCGGCTCCGCT,-,0.00) -140(GCGGCCCGGCCC,+,0.00) 561_WT_peak_3299 chr17 62223274 62223555 + 46 NA promoter-TSS (NR_004380) promoter-TSS (NR_004380) -24 NR_004380 692227 NR_004380 ENSG00000199753 SNORD104 U104 small nucleolar RNA, C/D box 104 snoRNA 0.088968 0.663121 -24(GGAGCAGGGAGG,-,0.00) -123(TCGACGCT,+,0.00) 97(GGGCTGGCGGGC,-,0.00),105(GGGCGGGCGCGC,-,0.00) 86(GAGCTGGGAGGG,-,0.00) -18(GGGAGGCGTAGG,+,0.00) 95(GGGGGCTGGCGG,+,0.00) 561_WT_peak_7325 chr9 88555544 88555853 + 46 NA promoter-TSS (NM_024635) promoter-TSS (NM_024635) -359 NM_024635 60560 Hs.436098 NM_024635 HPRD:11291 NAA35 EGAP|MAK10|MAK10P|bA379P1.1 N(alpha)-acetyltransferase 35, NatC auxiliary subunit protein-coding 0.055016 0.467742 133(GACTCCGGGCTC,-,0.00) 561_WT_peak_166 chr1 33767943 33768056 + 46 NA Intergenic MLT1K|LTR|ERVL-MaLR 18700 NM_001080438 127550 NM_001080438 ENSG00000184389 A3GALT2 A3GALT2P|IGBS3S alpha 1,3-galactosyltransferase 2 protein-coding 0.000000 0.508772 561_WT_peak_7355 chr9 97623426 97623607 + 46 NA intron (NM_032823, intron 5 of 14) intron (NM_032823, intron 5 of 14) 51272 NR_031755 100313780 NR_031755 MIR2278 - microRNA 2278 ncRNA 0.022099 0.521978 -152(CGTACGGG,-,0.00) 561_WT_peak_6267 chr6 30684706 30684879 + 46 NA intron (NM_014641, intron 1 of 14).4 intron (NM_014641, intron 1 of 14).4 666 NM_014641 9656 Hs.653495 NM_014641 HPRD:16252 MDC1 NFBD1 mediator of DNA-damage checkpoint 1 protein-coding 0.046243 0.568966 -36(GCCCGACG,-,0.00) 561_WT_peak_7488 chr9 140610775 140610953 + 46 NA intron (NM_001145527, intron 2 of 15) (TGG)n|Simple_repeat|Simple_repeat -46610 NR_024341 643210 Hs.721002 NM_001039765 EHMT1-IT1 - EHMT1 intronic transcript 1 ncRNA 0.000000 0.558659 561_WT_peak_1603 chr12 12538129 12538299 + 46 NA intron (NM_001300742, intron 2 of 3) intron (NM_001300742, intron 2 of 3) 28201 NM_058169 118426 Hs.720779 NM_058169 HPRD:17439 LOH12CR1 LOH1CR12 loss of heterozygosity, 12, chromosomal region 1 protein-coding 0.017647 0.467836 561_WT_peak_6857 chr7 135346951 135347463 + 46 NA promoter-TSS (NM_001130929) promoter-TSS (NM_001130929) -14 NM_001130929 647087 Hs.200022 NM_001130929 C7orf73 PL-5283 chromosome 7 open reading frame 73 protein-coding 0.101562 0.690058 184(GCGCCCTCCTCG,+,0.00) 98(TGACCCGGAAGT,+,0.00) 122(CCGCCCCCCCCG,+,0.00) 201(CCCACCGA,+,0.00) 64(GGGCTGAGTGGG,-,0.00) 272(CCTCGGAC,+,0.00) 130(CCCGCGCA,+,0.00) 248(GCGGGGCCCGCT,+,0.00) 162(CGCGGAGCTGCT,+,0.00) 316(CCGGCCTGGGCG,+,0.00) 561_WT_peak_1302 chr11 60609504 60609676 + 46 NA 5' UTR (NM_024098, exon 1 of 4) 5' UTR (NM_024098, exon 1 of 4) 161 NM_024098 79080 Hs.4253 NM_024098 HPRD:08322 CCDC86 - coiled-coil domain containing 86 protein-coding 0.110465 0.658960 -160(CGGACGCG,-,0.00) -118(GGCGGGGG,+,0.00) -125(CGGTTTCG,-,0.00) -41(GCTGGGAGGC,+,0.00) 561_WT_peak_3921 chr19 58220348 58220627 + 46 NA promoter-TSS (NM_001085384) promoter-TSS (NM_001085384) 92 NR_110974 7710 Hs.646378 NM_003444 HPRD:07245 ZNF154 pHZ-92 zinc finger protein 154 protein-coding 0.082437 0.632143 -55(AGACGCTT,-,0.00) -71(GGCGTCGC,-,0.00) -153(TGGGCCGGGA,-,0.00) -47(TCGTGCAG,+,0.00),55(CGCCACGA,-,0.00) -145(GAGCGACG,-,0.00),-69(CGTCGCCA,+,0.00) -163(CGGGTAGA,+,0.00) -119(CCGGGGACAGCG,+,0.00) -75(GGGCGGCGTC,+,0.00),-3(AACTCGGCGC,-,0.00) 54(CCGCCACG,-,0.00) -80(CCCCAGGGCGGC,-,0.00) 561_WT_peak_5954 chr5 139486866 139487289 + 46 NA non-coding (NR_102741, exon 1 of 4) non-coding (NR_102741, exon 1 of 4) 520 NR_102741 100505636 Hs.438871 NR_102739 ENSG00000245146 LINC01024 - long intergenic non-protein coding RNA 1024 ncRNA 0.096927 0.667453 114(TCCCCCTCCTCA,+,0.00) 216(CTCGGCGGCC,-,0.00) -85(GGCGGGGG,+,0.00) 94(GGGCGGAGAGGC,-,0.00) -138(TTTCCCCG,-,0.00) 71(TGGGCGGT,-,0.00) -97(GGGCGGAGTT,+,0.00) 561_WT_peak_4550 chr20 3748963 3749164 + 46 NA promoter-TSS (NM_001039140) promoter-TSS (NM_001039140) -28 NR_047675 54976 Hs.274422 NM_017874 HPRD:16648 C20orf27 - chromosome 20 open reading frame 27 protein-coding 0.104478 0.717822 -72(GGGCTGGGAGAG,-,0.00) -122(GCCTGGCCCGGC,-,0.00) -140(CCGAGACG,-,0.00) -6(GTCGCCATGGCA,+,0.00),-4(CGCCATGGCAGC,-,0.00) 561_WT_peak_2885 chr16 69599594 69599930 + 46 NA promoter-TSS (NM_006599) promoter-TSS (NM_006599) 9 NR_031719 100302119 NR_031719 miRBase:MI0007259 MIR1538 MIRN1538|hsa-mir-1538 microRNA 1538 ncRNA 0.110119 0.744807 69(CCCCCCTCCGCG,+,0.00) 18(GCGCCTCCCCGC,+,0.00),26(CCGCCCTCCGGG,+,0.00),54(CCGCGCTCCCGG,+,0.00) -158(TCGCCGCC,+,0.00),137(GGCGGCGA,-,0.00) 23(TCCCCGCCCT,+,0.00) -21(CGGCAGGA,-,0.00) -28(GCCGCGCC,+,0.00) -33(CCCGGGCCGCGC,-,0.00),123(GCGGCGGCGGCG,+,0.00) 17(CGCGCCTCCCCG,-,0.00) -30(GGGCCGCGCC,+,0.00),100(GGGCGGGGCT,+,0.00) 40(CCGCCACG,-,0.00) 39(GCCGCCACGGCT,+,0.00) -70(GCAGCGGGGC,+,0.00) 561_WT_peak_7367 chr9 100000518 100000872 + 46 NA promoter-TSS (NR_036529) promoter-TSS (NR_036529) -13 NR_036527 57653 Hs.435629 NR_036527 LOC100499484-C9ORF174 - LOC100499484-C9orf174 readthrough ncRNA 0.084746 0.670423 -132(CTGGGAGCGCGG,-,0.00),-111(CTGGGAGCGCGG,-,0.00) 119(GGCTTCGA,-,0.00) 32(TCGGTTGG,-,0.00) 63(TGGGCGGT,-,0.00) -139(GCGGGGACTGGG,+,0.00),-26(CTCCCGCCCCGC,-,0.00) -5(GCTGCGTGGC,+,0.00) -5(GCTGCGTGGCTG,+,0.00) 561_WT_peak_1203 chr11 9406229 9406424 + 46 NA exon (NM_006391, exon 1 of 25) exon (NM_006391, exon 1 of 25) 157 NM_006391 10527 Hs.744911 NM_006391 HPRD:09280 IPO7 Imp7|RANBP7 importin 7 protein-coding 0.102564 0.683673 -63(TCGAGGCC,+,0.00) -16(GAGCGCCAGCTC,+,0.00) 9(CGCCCGGC,-,0.00) -107(CGGGTTTG,-,0.00) -152(TGCGCAGT,-,0.00) -22(GCCGCGGAGC,+,0.00) 561_WT_peak_3628 chr19 11593427 11593761 + 46 NA TTS (NM_138783) TTS (NM_138783) -1791 NM_001420 1995 Hs.1701 NM_001420 HPRD:16024 ELAVL3 HUC|HUCL|PLE21 ELAV like neuron-specific RNA binding protein 3 protein-coding 0.104790 0.722388 -24(CCTACGCG,-,0.00) 112(CCCGCGGC,-,0.00) 158(GGGTTTTG,-,0.00) 118(GCTTCCTGTTTT,-,0.00) 3(GCCGCGCC,+,0.00) -34(GCCACCAGGGCC,+,0.00),80(GGCCAGGGCAGC,-,0.00) 561_WT_peak_5340 chr3 183735704 183735874 + 46 NA promoter-TSS (NM_005688) promoter-TSS (NM_005688) -62 NM_001023587 10057 Hs.368563 NM_005688 HPRD:06898 ABCC5 ABC33|EST277145|MOAT-C|MOATC|MRP5|SMRP|pABC11 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 protein-coding 0.100000 0.672515 -162(ATCGGCCGCC,-,0.00) -16(GGGCTGCCCCTC,-,0.00) -74(CGGACGCG,-,0.00) -2(CCCACCGA,+,0.00) -150(ACCGCGCA,+,0.00) -69(GCGGCGAAGG,+,0.00) 561_WT_peak_5505 chr4 77135220 77135448 + 46 NA promoter-TSS (NM_001204255) promoter-TSS (NM_001204255) 141 NM_001242936 100129583 Hs.720509 NM_001136570 ENSG00000189157 FAM47E - family with sequence similarity 47, member E protein-coding 0.048246 0.563319 -68(AGGTGGCT,+,0.00) -161(CCCACCGA,+,0.00) -24(GCGGGGACACCG,+,0.00) 561_WT_peak_3692 chr19 19729170 19729435 + 46 NA intron (NR_038198, intron 1 of 7) CpG 423 NM_025245 80714 Hs.466257 NM_025245 HPRD:16287 PBX4 - pre-B-cell leukemia homeobox 4 protein-coding 0.109434 0.736842 66(GGCGGGGGGCGA,-,0.00) -91(TCCACGCC,+,0.00) 59(GCCGCGGG,+,0.00),66(GGCGGGGG,+,0.00) 47(TCGTGTCG,+,0.00) 41(CGTCGCTC,+,0.00) -80(TCCCCTCAGCCC,+,0.00) 86(GGCGCGGC,-,0.00) 62(GCGGGGCGGGGG,+,0.00) 53(CGAGGCGCCGCG,+,0.00),53(CGAGGCGCCGCG,-,0.00) 73(GGCGATGGCGCG,-,0.00) 59(GCCGCGGGGC,+,0.00),89(GCGGCGGGGC,+,0.00) 561_WT_peak_2194 chr14 50320565 50320775 + 46 NA Intergenic Intergenic -1131 NM_004713 9147 Hs.655964 NM_004713 HPRD:08494 NEMF NY-CO-1|SDCCAG1 nuclear export mediator factor protein-coding 0.061905 0.582938 -69(AGAGGCTT,-,0.00) -92(GGCGTCGC,-,0.00) -104(CGCCCGGC,-,0.00) -90(CGTCGCTG,+,0.00) -108(ACCGCGCC,+,0.00) -114(CGCGCCACCGCG,-,0.00) -137(CCGAGTAG,-,0.00) -91(GCGTCGCTGC,-,0.00) 561_WT_peak_4442 chr2 202278990 202279064 + 46 NA intron (NM_015049, intron 2 of 15) intron (NM_015049, intron 2 of 15) 37292 NM_015049 66008 Hs.152774 NM_015049 HPRD:09547 TRAK2 ALS2CR3|CALS-C|GRIF-1|GRIF1|MILT2|OIP98 trafficking protein, kinesin binding 2 protein-coding 0.013514 0.306667 561_WT_peak_3505 chr18 48494385 48494982 + 46 NA intron (NM_018696, intron 1 of 3) intron (NM_018696, intron 1 of 3) 296 NM_018696 55520 Hs.657360 NM_018696 HPRD:16275 ELAC1 D29 elaC ribonuclease Z 1 protein-coding 0.095477 0.692308 72(CGGGCCGGAGTC,+,0.00),88(CGGGCCGGAGCC,+,0.00) 99(CTCGGCCGCC,-,0.00),225(CTCTGCCGCC,-,0.00) 40(CCGGGAGCGAGG,-,0.00) 135(TCGAGGCC,+,0.00) -37(GGGCGGGCGCGC,-,0.00),6(GGCCCGGCGCTG,-,0.00) 105(CGCCCGGC,-,0.00),231(CGCCCGGC,-,0.00) -10(CGGCTCGA,-,0.00) -106(CCTGCGCCTCCC,-,0.00),-97(CCCTCGGCTCCT,-,0.00) 116(GCCGCCCA,+,0.00) -124(GCTGGGCCAGGG,+,0.00),193(CTCTGGCCCTGC,-,0.00) 111(GCGCCGCCGC,-,0.00) 561_WT_peak_5570 chr4 103940622 103940852 + 46 NA intron (NM_139173, intron 1 of 11) CpG 159 NR_047515 150159 Hs.666728 NM_139173 HPRD:11240 SLC9B1 NHA1|NHEDC1 solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 protein-coding 0.078261 0.640693 -5(TGGCCCGGGAGC,+,0.00) -8(CGCTGGCCCGGG,-,0.00) -58(GGGCGGCGTT,+,0.00),2(GGAGCGGCCC,-,0.00) 561_WT_peak_476 chr1 148603991 148604179 + 46 NA intron (NR_104217, intron 2 of 17) intron (NR_104217, intron 2 of 17) 43238 NM_173638 284565 Hs.523572 NM_173638 HPRD:14710 NBPF15 AB14|AG3|NBPF16 neuroblastoma breakpoint family, member 15 protein-coding 0.042553 0.566138 -146(GGCCTCGA,-,0.00),-142(TCGATGCC,+,0.00) -161(CGGTTCTG,-,0.00),-33(CGGTTTTC,-,0.00) -113(CGGGCAAA,+,0.00) 561_WT_peak_5651 chr4 186124631 186124919 + 46 NA intron (NM_020827, intron 1 of 4) CpG 407 NM_020827 57587 Hs.535734 NM_020827 ENSG00000164323 CFAP97 KIAA1430|hmw cilia and flagella associated protein 97 protein-coding 0.111111 0.674740 -54(GGGCCCGGCATG,+,0.00) -125(CCCGGAAGGCAG,-,0.00),7(CCCGGAACGCGC,-,0.00) 117(CGTCCGCG,-,0.00) 79(GCCGCGGG,+,0.00) 102(GGCGCGGT,-,0.00) 561_WT_peak_3249 chr17 49107193 49107394 + 46 NA intron (NM_001251971, intron 2 of 26) intron (NM_001251971, intron 2 of 26) 17036 NM_001251971 9043 Hs.463439 NM_003971 HPRD:10398 SPAG9 CT89|HLC-6|HLC4|JIP-4|JIP4|JLP|PHET|PIG6 sperm associated antigen 9 protein-coding 0.004975 0.301980 561_WT_peak_5368 chr3 196044895 196045222 + 46 NA promoter-TSS (NR_121665) promoter-TSS (NR_121665) 107 NM_152773 255758 Hs.733180 NM_152773 HPRD:14554 TCTEX1D2 - Tctex1 domain containing 2 protein-coding 0.119266 0.710366 38(AAGCGTCT,+,0.00) 60(CCGCCCTCCCGC,+,0.00),102(CCGCCCTCCCTG,+,0.00) 151(CGCGTCCG,+,0.00) -70(CCCACCGA,+,0.00),-24(TCGGTCCG,-,0.00) 108(TCCCTGCCCG,+,0.00) 105(CCCTCCCTGCCC,+,0.00) -157(TCTACCCG,-,0.00) -66(CCGAGAAG,-,0.00),-28(CTTCTCGG,+,0.00),68(CCGCCTCG,-,0.00) -41(GGCCATGCCGGG,-,0.00) 561_WT_peak_4966 chr22 48494032 48494052 + 46 NA Intergenic Intergenic -176134 NR_036172 100422916 NR_036172 miRBase:MI0014250 MIR3201 - microRNA 3201 ncRNA 0.000000 0.285714 561_WT_peak_5184 chr3 101568418 101568632 + 46 NA exon (NM_031419, exon 1 of 12) exon (NM_031419, exon 1 of 12) 167 NM_031419 64332 Hs.319171 NM_031419 HPRD:09217 NFKBIZ IKBZ|INAP|MAIL nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta protein-coding 0.144860 0.753488 15(CCGCCGCCCCGG,+,0.00) 5(TCGCCGCC,+,0.00),33(GCGACGCC,+,0.00) -77(CGGCGGAGAGGG,-,0.00) 2(GCGTCGCCGC,-,0.00) 561_WT_peak_1372 chr11 65686063 65686234 + 46 NA promoter-TSS (NM_006442) promoter-TSS (NM_006442) 383 NM_031450 83638 Hs.433573 NM_031450 HPRD:12553 C11orf68 BLES03|P5326 chromosome 11 open reading frame 68 protein-coding 0.087719 0.616279 -162(GTATCCGGTGCG,-,0.00) -117(CGTTCGCG,-,0.00) 561_WT_peak_2202 chr14 50529374 50529633 + 46 NA Intergenic Intergenic -22901 NR_102736 100506499 Hs.728904 NR_102736 LOC100506499 - uncharacterized LOC100506499 ncRNA 0.003861 0.480769 561_WT_peak_7529 chrX 47004222 47004405 + 46 NA promoter-TSS (NM_001204467) promoter-TSS (NM_001204467) 296 NM_019056 54539 Hs.521969 NM_019056 HPRD:02323 NDUFB11 CI-ESSS|ESSS|NP17.3|Np15|P17.3 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa protein-coding 0.043716 0.538043 -164(GGCGTTGA,-,0.00) -107(TCGGCCAGGCTG,+,0.00) 561_WT_peak_1612 chr12 12878703 12878873 + 46 NA promoter-TSS (NM_001130415) promoter-TSS (NM_001130415) -63 NM_001130415 81575 Hs.23388 NM_030817 HPRD:13153 APOLD1 VERGE apolipoprotein L domain containing 1 protein-coding 0.052941 0.561404 -4(GGCGGGGG,+,0.00) -112(CGGCCCGA,-,0.00) -99(GGGTTTTG,-,0.00) -60(GGGCGGAGCT,+,0.00) 561_WT_peak_7540 chrX 48754766 48754971 + 46 NA promoter-TSS (NM_001167992) promoter-TSS (NM_001167992) -327 NM_001032382 10084 Hs.534384 NM_005710 HPRD:02354 PQBP1 MRX2|MRX55|MRXS3|MRXS8|NPW38|RENS1|SHS polyglutamine binding protein 1 protein-coding 0.087805 0.631068 34(GGCGTCGC,-,0.00) 9(CCGCCCGA,+,0.00) 6(CCCCCGCC,-,0.00) 28(GGCCTTGGCGTC,-,0.00) -123(CCTTCGCCGC,-,0.00) 561_WT_peak_1466 chr11 102431483 102431666 + 46 NA Intergenic L3b|LINE|CR1 -30096 NM_002423 4316 Hs.2256 NM_002423 HPRD:01525 MMP7 MMP-7|MPSL1|PUMP-1 matrix metallopeptidase 7 (matrilysin, uterine) protein-coding 0.010929 0.385870 561_WT_peak_4227 chr2 98280802 98281042 + 46 NA promoter-TSS (NM_005735) promoter-TSS (NM_005735) -361 NM_005735 10120 Hs.98791 NM_005735 HPRD:05508 ACTR1B ARP1B|CTRN2|PC3 ARP1 actin-related protein 1 homolog B, centractin beta (yeast) protein-coding 0.062500 0.543568 -27(AGGTGTCT,+,0.00) 25(CCGCGCCAGCCA,+,0.00) -133(GCGTCCCAGC,-,0.00) 561_WT_peak_4099 chr2 64263473 64263759 + 46 NA Intergenic Intergenic -17402 NM_016516 51542 Hs.48499 NM_016516 HPRD:10302 VPS54 HCC8|PPP1R164|SLP-8p|VPS54L|WR|hVps54L vacuolar protein sorting 54 homolog (S. cerevisiae) protein-coding 0.003497 0.404181 47(ATGTGGCT,+,0.00) -137(CCTTCCCAGC,-,0.00) 561_WT_peak_4185 chr2 87758521 87758703 + 46 NA intron (NR_024206, intron 1 of 1) intron (NR_024206, intron 1 of 1) 3638 NR_024206 112597 Hs.652166 NM_052871 HPRD:14654 LINC00152 C2orf59|NCRNA00152 long intergenic non-protein coding RNA 152 ncRNA 0.016484 0.459016 -80(GCTTCCTGTCTA,-,0.00) 561_WT_peak_5094 chr3 47830704 47830733 + 46 NA Intergenic Intergenic -7313 NM_003074 6599 Hs.476179 NM_003074 HPRD:03435 SMARCC1 BAF155|CRACC1|Rsc8|SRG3|SWI3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 protein-coding 0.000000 0.433333 561_WT_peak_324 chr1 93049999 93050256 + 46 NA intron (NM_005665, intron 16 of 17) intron (NM_005665, intron 16 of 17) -97694 NM_005263 2672 Hs.73172 NM_005263 HPRD:07527 GFI1 GFI-1|GFI1A|SCN2|ZNF163 growth factor independent 1 transcription repressor protein-coding 0.003891 0.325581 561_WT_peak_6077 chr6 2859273 2859440 + 45 NA intron (NR_033851, intron 1 of 1) intron (NR_033851, intron 1 of 1) -5015 NR_039788 100616285 NR_039788 miRBase:MI0017272 MIR4645 - microRNA 4645 ncRNA 0.011976 0.553571 -92(CGTCGCTC,+,0.00) -44(GCTCAGCAGC,-,0.00) 561_WT_peak_5426 chr4 17812406 17812708 + 45 NA promoter-TSS (NM_017741) promoter-TSS (NM_017741) 121 NM_022346 64151 Hs.567567 NM_022346 HPRD:12097 NCAPG CAPG|CHCG|NY-MEL-3|YCG1 non-SMC condensin I complex, subunit G protein-coding 0.089404 0.620462 -141(AAACGGCT,+,0.00),-117(AGACGCAT,-,0.00) -47(CGCTTACG,+,0.00) 107(TCGTCCCG,+,0.00) 43(CTACTCGG,+,0.00) 71(GCGGGCTGGCAG,+,0.00) 561_WT_peak_6912 chr7 155089653 155089823 + 45 NA intron (NM_198336, intron 1 of 5) CpG 252 NM_005542 3638 Hs.520819 NM_005542 HPRD:03633 INSIG1 CL-6|CL6 insulin induced gene 1 protein-coding 0.135294 0.766082 -148(GGTACGCG,-,0.00) -45(CGCGGGTCCCGC,-,0.00),-36(CGCTGGGGCCGG,-,0.00) 561_WT_peak_2967 chr17 1359043 1359140 + 45 NA intron (NM_016823, intron 1 of 2) CpG 470 NM_016823 1398 Hs.461896 NM_005206 HPRD:01267 CRK CRKII|p38 v-crk avian sarcoma virus CT10 oncogene homolog protein-coding 0.082474 0.755102 -101(CAGCCAGGCTGG,-,0.00) 561_WT_peak_21 chr1 2231817 2232018 + 45 NA intron (NM_003036, intron 1 of 6) intron (NM_003036, intron 1 of 6) 52183 NR_024489 100129534 Hs.655313 NM_001127577 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo 0.034826 0.618812 -61(CTGACCGA,+,0.00) -162(GGGTTTTG,-,0.00),-72(TGGTTTTG,-,0.00) 561_WT_peak_508 chr1 150208821 150209003 + 45 NA promoter-TSS (NM_001136478) promoter-TSS (NM_001136478) -408 NM_001280560 81611 Hs.656466 NM_030920 HPRD:16493 ANP32E LANP-L|LANPL acidic (leucine-rich) nuclear phosphoprotein 32 family, member E protein-coding 0.043956 0.519126 -120(CGGCACGC,-,0.00) 561_WT_peak_1644 chr12 31477994 31478227 + 45 NA non-coding (NR_026806, exon 1 of 1) non-coding (NR_026806, exon 1 of 1) 860 NR_026806 79857 Hs.534485 NM_024799 ENSG00000177340 FLJ13224 - uncharacterized LOC79857 ncRNA 0.103004 0.645299 -67(CGCGGACG,+,0.00) -133(CCCGCGGC,-,0.00) 59(GTCCGAAG,-,0.00) -51(TAAACGGGAAGC,+,0.00) -59(GCCGCCCA,+,0.00),53(GGCGCGGT,-,0.00) 561_WT_peak_403 chr1 117047216 117047473 + 45 NA Intergenic Intergenic 66371 NR_026665 965 Hs.34341 NM_001779 HPRD:01081 CD58 LFA-3|LFA3|ag3 CD58 molecule protein-coding 0.007782 0.546512 -80(AAGCCTCT,+,0.00) -129(AGGGCTGGGA,-,0.00) -78(GCCTCTCAACCC,+,0.00) 561_WT_peak_3474 chr18 29523484 29523715 + 45 NA promoter-TSS (NM_014939) promoter-TSS (NM_014939) -508 NM_014939 22878 Hs.202001 NM_014939 HPRD:10019 TRAPPC8 GSG1|HsT2706|KIAA1012|TRS85 trafficking protein particle complex 8 protein-coding 0.043290 0.512931 561_WT_peak_7485 chr9 139622625 139622838 + 45 NA promoter-TSS (NR_003672) promoter-TSS (NR_003672) -95 NR_003672 84973 Hs.495480 NR_003672 ENSG00000233016 SNHG7 NCRNA00061 small nucleolar RNA host gene 7 (non-protein coding) ncRNA 0.145540 0.738318 -121(CGCGTACG,+,0.00) -56(CGTTCAGCTCCC,-,0.00) -137(GCCGCGCC,+,0.00) 12(CGCAGAGCAGCG,+,0.00) -76(GCCCCCCAGC,-,0.00) 561_WT_peak_4970 chr22 50328695 50328865 + 45 NA Intergenic CpG 16502 NM_001284317 79174 Hs.211282 NM_024324 HPRD:08455 CRELD2 - cysteine-rich with EGF-like domains 2 protein-coding 0.076471 0.725146 -43(GGGCTGGTGGTC,-,0.00) -158(CCAGGGCCAGCG,+,0.00) 561_WT_peak_1564 chr12 7047107 7047325 + 45 NA exon (NM_001940, exon 6 of 10) exon (NM_001940, exon 6 of 10) -5987 NM_138425 113246 Hs.405913 NM_138425 HPRD:13609 C12orf57 C10|GRCC10|TEMTYS chromosome 12 open reading frame 57 protein-coding 0.151376 0.684932 -98(GCGGGAACGCGA,-,0.00) -112(GAGCGCGAGCGC,+,0.00),-82(GAGCGCGAGCGC,+,0.00) -148(CGGCGCGA,-,0.00) 39(GCTGCGGGGC,+,0.00) 561_WT_peak_2326 chr14 90864018 90864304 + 45 NA intron (NM_006888, intron 1 of 5) CpG 834 NM_006888 801 Hs.282410 NM_006888 HPRD:00241 CALM1 CALML2|CAMI|CPVT4|DD132|PHKD|caM calmodulin 1 (phosphorylase kinase, delta) protein-coding 0.097902 0.749129 102(GGCGGCCGGG,+,0.00) -7(CCTTCTTCCCGG,+,0.00),2(CGGGGGGCGCGG,-,0.00) -128(GGGCTGGAGCTG,-,0.00) -152(TCGGGCGG,-,0.00),-23(TCGGTCGC,-,0.00) -9(CTCCTTCTTCCC,-,0.00),95(CGGAAGCGGCGG,+,0.00) 23(GGGCTGGGAAGG,-,0.00),83(GGGCGGAGAGGG,-,0.00) 7(GGCGCGGC,-,0.00) 10(GCGGCGCGGGCG,+,0.00) 111(GCCGCCCTGCGC,+,0.00) 25(GCTGGGAAGG,+,0.00) 103(GCGGCCGGGCCG,+,0.00),104(CGGCCGGGCCGC,-,0.00) 561_WT_peak_7413 chr9 123693736 123694154 + 45 NA Intergenic Intergenic -2494 NM_001190945 7185 Hs.531251 NM_005658 HPRD:03418 TRAF1 EBI6|MGC:10353 TNF receptor-associated factor 1 protein-coding 0.007177 0.458234 0(TCCTCTCTGCCC,+,0.00) 561_WT_peak_334 chr1 97187548 97187903 + 45 NA promoter-TSS (NR_125356) promoter-TSS (NR_125356) -469 NR_125356 58155 Hs.596061 NM_021190 HPRD:12233 PTBP2 PTBLP|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding 0.056338 0.657303 -160(CCCCCGCC,-,0.00),-125(CCCCCGGC,-,0.00),-55(GGCGGGGG,+,0.00),-11(GGCGGGGG,+,0.00) -17(CTTGGCGG,+,0.00) -61(GGCGATGGCGGG,-,0.00),-20(CGGCTTGGCGGC,-,0.00) -21(CCGGCTTGGCGG,+,0.00) 561_WT_peak_5436 chr4 26321586 26321766 + 45 NA promoter-TSS (NM_015874) promoter-TSS (NM_015874) 344 NM_005349 3516 Hs.479396 NM_005349 HPRD:00920 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding 0.083333 0.668508 6(CGGCAAGA,-,0.00) 561_WT_peak_5356 chr3 187495237 187495482 + 45 NA Intergenic Intergenic -31846 NM_001706 604 Hs.478588 NM_001706 HPRD:00180 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 B-cell CLL/lymphoma 6 protein-coding 0.008163 0.394309 561_WT_peak_4961 chr22 45714696 45714919 + 45 NA intron (NM_001104595, intron 2 of 9) intron (NM_001104595, intron 2 of 9) 9022 NM_017911 55007 Hs.265018 NM_017911 HPRD:07936 FAM118A C22orf8 family with sequence similarity 118, member A protein-coding 0.026906 0.464286 -78(AGGTTTTG,-,0.00) 561_WT_peak_4628 chr20 36156562 36156754 + 45 NA promoter-TSS (NM_001167821) promoter-TSS (NM_001167821) -325 NM_006698 10904 Hs.472651 NM_006698 HPRD:16552 BLCAP BC10 bladder cancer associated protein protein-coding 0.067708 0.595855 -72(CGGGAAAA,+,0.00) -138(GGGCCGGGTT,+,0.00) 561_WT_peak_2067 chr13 60970979 60971473 + 45 NA promoter-TSS (NM_001146070) promoter-TSS (NM_001146070) -201 NM_001146070 81550 Hs.525061 NM_030794 HPRD:11625 TDRD3 - tudor domain containing 3 protein-coding 0.068826 0.612121 198(AAGCGCCGGCCG,+,0.00) 189(CGCACGCG,-,0.00) -119(CCCTCGCAGCCA,+,0.00) 16(AAAGCGCCCC,-,0.00) -119(CCCTCGCAGC,-,0.00),119(GCTCCGCAGC,-,0.00) 561_WT_peak_3688 chr19 19599945 19600327 + 45 NA intron (NM_001300946, intron 1 of 10) intron (NM_001300946, intron 1 of 10) 23987 NM_001300946 54815 Hs.118964 NM_017660 HPRD:11741 GATAD2A p66alpha GATA zinc finger domain containing 2A protein-coding 0.018325 0.530026 -65(GGGCTGGCGCCA,-,0.00) -36(GCTCCACAGC,-,0.00) 561_WT_peak_3258 chr17 55677586 55677766 + 45 NA TTS (NR_110807) TTS (NR_110807) 8097 NR_110807 101927539 Hs.680439 NR_110807 ENSG00000263499 LOC101927539 - uncharacterized LOC101927539 ncRNA 0.005556 0.453039 561_WT_peak_268 chr1 65532640 65532858 + 45 NA Intergenic CpG -8558 NR_029516 406893 NR_029516 miRBase:MI0000103 MIR101-1 MIRN101-1 microRNA 101-1 ncRNA 0.142202 0.739726 -49(CGCACGCG,-,0.00) 16(GCCCGGCCCG,+,0.00),21(GCCCGGCCCG,+,0.00) -107(CAAAACCG,+,0.00) -62(CGGGAAAA,+,0.00) -113(GCCGCGCA,+,0.00) 25(GGCCCGCCCCGC,-,0.00),39(CGCCGCCCCCGC,-,0.00) -150(CGGGGCTCCCCG,-,0.00) 35(GCGCCGCCGC,-,0.00) 561_WT_peak_4305 chr2 133036965 133037294 + 45 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA -21587 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo 0.027356 0.593939 -72(CGGGTCAA,+,0.00) 561_WT_peak_577 chr1 160510069 160510239 + 45 NA TTS (NM_001184879) TTS (NM_001184879) -17102 NM_052931 114836 Hs.492348 NM_052931 HPRD:05920 SLAMF6 CD352|KALI|KALIb|Ly108|NTB-A|NTBA|SF2000 SLAM family member 6 protein-coding 0.011765 0.491228 -101(AAGTGGTT,+,0.00) -98(TGGTTTTG,-,0.00) 561_WT_peak_4075 chr2 55496021 55496293 + 45 NA 5' UTR (NM_001005369, exon 1 of 17) 5' UTR (NM_001005369, exon 1 of 17) 158 NM_001005369 4528 Hs.149894 NM_002453 HPRD:04792 MTIF2 - mitochondrial translational initiation factor 2 protein-coding 0.062500 0.578755 -86(AGCCGCTT,-,0.00) 561_WT_peak_99 chr1 22778343 22778648 + 45 NA 5' UTR (NM_014870, exon 1 of 18) 5' UTR (NM_014870, exon 1 of 18) 151 NM_001083621 9923 Hs.418966 NM_014870 HPRD:11086 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding 0.095082 0.611111 118(CACGGCCGCC,-,0.00) 6(GGGCTGGGACTC,-,0.00) 42(GGGGCCCGGGTG,+,0.00) 561_WT_peak_7165 chr8 134580852 134581027 + 45 NA intron (NM_173344, intron 1 of 9) intron (NM_173344, intron 1 of 9) 3244 NM_173344 6482 Hs.374257 NM_003033 HPRD:06219 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding 0.000000 0.494318 561_WT_peak_2509 chr15 64386161 64386334 + 45 NA promoter-TSS (NM_001289108) promoter-TSS (NM_001289108) -40 NM_001289108 84191 Hs.439548 NM_032231 HPRD:08010 FAM96A - family with sequence similarity 96, member A protein-coding 0.080925 0.517241 -129(CTTCGCGG,+,0.00) 561_WT_peak_4861 chr22 26132758 26132928 + 45 NA Intergenic Intergenic -5277 NM_032608 84700 Hs.417959 NM_032608 HPRD:09529 MYO18B - myosin XVIIIB protein-coding 0.011765 0.502924 561_WT_peak_504 chr1 149899525 149899832 + 45 NA TTS (NM_001145862) TTS (NM_001145862) 466 NM_005850 10262 Hs.516160 NM_005850 HPRD:12028 SF3B4 AFD1|Hsh49|SAP49|SF3b49 splicing factor 3b, subunit 4, 49kDa protein-coding 0.078176 0.649351 -52(CGGCCCGGCAGC,+,0.00) 84(AAGCGGCT,+,0.00) 124(TGGGTCGG,-,0.00),128(TCGGGCGG,-,0.00) 12(CAGCACGA,-,0.00) 65(CGGAAGAGGAGG,+,0.00) -113(TAGCCACG,-,0.00) 56(GCGGGGCCGCGG,+,0.00) 55(GGCGGGGCCGCG,+,0.00) -56(AGATCGGCCC,-,0.00) -45(GCAGCCATGGCG,+,0.00) 561_WT_peak_1177 chr11 207668 207873 + 45 NA promoter-TSS (NM_016526) promoter-TSS (NM_016526) 259 NM_021932 60626 Hs.592292 NM_021932 HPRD:12373 RIC8A RIC8 RIC8 guanine nucleotide exchange factor A protein-coding 0.053659 0.626214 -96(AGACGCTT,-,0.00) -40(AGGAAGGAGCAG,+,0.00) 561_WT_peak_2695 chr16 10972687 10972857 + 45 NA intron (NR_104444, intron 1 of 17) intron (NR_104444, intron 1 of 17) 1717 NM_001286403 4261 Hs.701991 NM_000246 HPRD:02475 CIITA C2TA|CIITAIV|MHC2TA|NLRA class II, major histocompatibility complex, transactivator protein-coding 0.058824 0.625731 -69(GCGGGGAGGCGG,-,0.00) -16(GCGGCCCCAGAG,+,0.00) -128(GCTCCACAGC,-,0.00) -122(CAGCCTGGCCCG,-,0.00) 561_WT_peak_7241 chr9 33025434 33025669 + 45 NA intron (NM_001539, intron 1 of 8) CpG 342 NM_001539 3301 Hs.445203 NM_001539 HPRD:04159 DNAJA1 DJ-2|DjA1|HDJ2|HSDJ|HSJ2|HSPF4|NEDD7|hDJ-2 DnaJ (Hsp40) homolog, subfamily A, member 1 protein-coding 0.076596 0.677966 52(CGTGCGCG,-,0.00) -145(GCGGTCGG,-,0.00) 62(CCCGCGGC,-,0.00) -43(CGGCACGC,-,0.00) 36(TCTTCGGCTGCC,-,0.00) 56(CGCGCCCCCGCG,-,0.00) 561_WT_peak_4844 chr22 21213493 21213643 + 45 NA promoter-TSS (NM_058004) promoter-TSS (NM_058004) 276 NM_004782 9342 Hs.108002 NM_004782 HPRD:11968 SNAP29 CEDNIK|SNAP-29 synaptosomal-associated protein, 29kDa protein-coding 0.100000 0.708609 -94(CACGGCCGCC,-,0.00) -123(CGGCAGGA,-,0.00) -157(GCCCGACG,-,0.00) -50(CCGAGAAG,-,0.00) -97(GGCCACGGCCGC,-,0.00) 561_WT_peak_359 chr1 109968467 109968535 + 45 NA intron (NM_001199774, intron 1 of 8) intron (NM_001199774, intron 1 of 8) 569 NM_001199772 5686 Hs.485246 NM_002790 HPRD:01464 PSMA5 PSC5|ZETA proteasome (prosome, macropain) subunit, alpha type, 5 protein-coding 0.044118 0.478261 561_WT_peak_2924 chr16 81041542 81041706 + 45 NA intron (NM_001270474, intron 1 of 9) AluSx1|SINE|Alu -1122 NM_020188 56942 Hs.55028 NM_020188 CMC2 2310061C15Rik|C16orf61 C-x(9)-C motif containing 2 protein-coding 0.067073 0.557576 -72(CCCGGGAGGCGG,-,0.00) -69(GGGAGGCGGAGG,+,0.00) 561_WT_peak_1027 chr10 70715523 70715754 + 45 NA promoter-TSS (NM_004728) promoter-TSS (NM_004728) -241 NM_004728 9188 Hs.223141 NM_004728 HPRD:05895 DDX21 GUA|GURDB|RH-II/GU|RH-II/GuA DEAD (Asp-Glu-Ala-Asp) box helicase 21 protein-coding 0.047619 0.474138 561_WT_peak_2897 chr16 71599022 71599276 + 45 NA promoter-TSS (NR_103851) promoter-TSS (NR_103851) 230 NR_103852 100132529 Hs.710296 NR_103851 ENSG00000260886 LOC100132529 - uncharacterized LOC100132529 ncRNA 0.047244 0.505882 -136(GTTTCCGGTCCT,-,0.00) 561_WT_peak_4042 chr2 43036947 43037163 + 45 NA Intergenic CpG -17304 NM_012205 23498 Hs.368805 NM_012205 HPRD:05158 HAAO 3-HAO|HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding 0.111111 0.769585 39(AGCCGCCA,-,0.00) 16(CGCCCGGC,-,0.00),31(CCCCCGCC,-,0.00) -121(CCGCGTCCTCCG,-,0.00) -138(CAAAGCCG,+,0.00) 7(CCCTGGCCTCGC,-,0.00) -103(GTGGCCTGGCCG,+,0.00) 561_WT_peak_3988 chr2 25599851 25600057 + 45 NA TTS (NM_033148) TTS (NM_033148) -34495 NM_175630 1788 Hs.515840 NM_022552 HPRD:04141 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA (cytosine-5-)-methyltransferase 3 alpha protein-coding 0.053398 0.574879 -163(CCTCCCTCCCGG,+,0.00),-130(CGGGGCGGGCGG,-,0.00) 561_WT_peak_4323 chr2 148055534 148055725 + 45 NA Intergenic Intergenic -546457 NM_001278580 92 Hs.470174 NM_001616 HPRD:00025 ACVR2A ACTRII|ACVR2 activin A receptor, type IIA protein-coding 0.015707 0.442708 -132(AGAGGCTT,-,0.00) -62(CGTTGCTA,+,0.00) -111(AAAAACCG,+,0.00) -34(GGGGTAAA,+,0.00) 561_WT_peak_2795 chr16 31190891 31190899 + 45 NA promoter-TSS (NM_004960) promoter-TSS (NM_004960) -536 NR_028388 2521 Hs.46894 NM_004960 HPRD:00660 FUS ALS6|ETM4|FUS1|HNRNPP2|POMP75|TLS FUS RNA binding protein protein-coding 0.000000 0.555556 561_WT_peak_6183 chr6 26555393 26555623 + 45 NA Intergenic tRNA-Pro-CCY|tRNA|tRNA 16936 NM_006353 10473 Hs.236774 NM_006353 HMGN4 HMG17L3|NHC high mobility group nucleosomal binding domain 4 protein-coding 0.043478 0.402597 -63(AGGCGGCT,+,0.00) 561_WT_peak_7424 chr9 127952581 127952839 + 45 NA promoter-TSS (NM_001123355) promoter-TSS (NM_001123355) -492 NM_001123369 5537 Hs.744091 NM_002721 HPRD:02141 PPP6C PP6|PP6C protein phosphatase 6, catalytic subunit protein-coding 0.027132 0.420849 20(AGGGCAGGGA,-,0.00) 561_WT_peak_4646 chr20 43976883 43977089 + 45 NA promoter-TSS (NM_002999) promoter-TSS (NM_002999) 78 NM_002999 6385 Hs.632267 NM_002999 HPRD:08366 SDC4 SYND4 syndecan 4 protein-coding 0.131068 0.734300 -133(CCGGCCTGCGCC,+,0.00) 22(CCGGGCGGGCGC,-,0.00) 24(GGGCGGGCGCGC,-,0.00) -68(CGCCTACG,+,0.00) -87(CCCACCGA,+,0.00) -34(GGCGGGGG,+,0.00) -154(CTCCGACG,-,0.00) -83(CCGACTCG,-,0.00),-82(CGACTCGG,+,0.00) -30(GGGGCCATGGCA,+,0.00),-28(GGCCATGGCACC,-,0.00) -118(GCTTCGCCCC,-,0.00) 561_WT_peak_1273 chr11 47290777 47291130 + 45 NA promoter-TSS (NM_130473) promoter-TSS (NM_130473) 26 NM_130470 8567 Hs.82548 NM_003682 HPRD:04664 MADD DENN|IG20|RAB3GEP MAP-kinase activating death domain protein-coding 0.050992 0.596045 0(GGCGTCGG,-,0.00) 139(GCCGCGGG,+,0.00) -109(TGGGTAAA,+,0.00) 561_WT_peak_6823 chr7 114610384 114610565 + 45 NA intron (NM_199072, intron 3 of 4) intron (NM_199072, intron 3 of 4) 48265 NM_001166345 29969 Hs.741413 NM_199072 HPRD:17103 MDFIC HIC MyoD family inhibitor domain containing protein-coding 0.005525 0.373626 5(CGTTTTTG,-,0.00) 561_WT_peak_2684 chr16 4897071 4897242 + 45 NA promoter-TSS (NM_001079514) promoter-TSS (NM_001079514) 147 NM_032569 84656 Hs.387255 NM_032569 HPRD:17625 GLYR1 BM045|HIBDL|N-PAC|NP60 glyoxylate reductase 1 homolog (Arabidopsis) protein-coding 0.128655 0.720930 -82(AGGGCCGGCAGC,+,0.00) -33(TCGGTTGG,-,0.00) -159(GCCTGGCGCCGC,-,0.00) -37(CGTCTCGG,+,0.00) 561_WT_peak_5444 chr4 37979429 37979605 + 45 NA intron (NM_001253912, intron 2 of 20) CpG 17461 NM_006607 10744 Hs.668806 NM_006607 HPRD:09176 PTTG2 - pituitary tumor-transforming 2 protein-coding 0.147727 0.762712 -21(CTGGGCCGCC,-,0.00) -87(TCGACCCC,+,0.00),-4(GGCGCCGA,-,0.00) -130(GAGCTGCCGCTC,-,0.00) -134(CGCGGAGCTGCC,+,0.00) -136(GCCGCGGAGC,+,0.00) 561_WT_peak_73 chr1 16162698 16162811 + 45 NA non-coding (NR_024279, exon 2 of 2) non-coding (NR_024279, exon 2 of 2) -11605 NM_015001 23013 Hs.744843 NM_015001 HPRD:10230 SPEN HIAA0929|MINT|RBM15C|SHARP spen family transcriptional repressor protein-coding 0.061947 0.578947 -79(GGCGTCGC,-,0.00) 561_WT_peak_7340 chr9 93913405 93913591 + 45 NA Intergenic Intergenic -76084 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA 0.016129 0.417112 -3(AGGGCAGGAA,-,0.00) 561_WT_peak_4623 chr20 35672094 35672368 + 45 NA intron (NM_183404, intron 13 of 20) L1MB8|LINE|L1 52172 NM_002895 5933 Hs.207745 NM_002895 HPRD:00312 RBL1 CP107|PRB1|p107 retinoblastoma-like 1 protein-coding 0.007299 0.345455 561_WT_peak_5073 chr3 42642173 42642412 + 45 NA intron (NM_005385, intron 1 of 16) CpG 145 NM_005385 4820 Hs.529509 NM_005385 HPRD:01195 NKTR p104 natural killer cell triggering receptor protein-coding 0.121339 0.720833 -46(CGTGCGCG,-,0.00) 66(GCCCCGCCCT,+,0.00) -146(TAGCGGCG,-,0.00),21(TCGCGACG,-,0.00) 58(TCGTCTCAGCCC,+,0.00) -44(TGCGCGCT,-,0.00) 65(AGCCCCGCCC,-,0.00) -28(GCCGCGAGGC,+,0.00) 561_WT_peak_2728 chr16 21964100 21964285 + 45 NA promoter-TSS (NM_003366) promoter-TSS (NM_003366) -417 NM_003366 7385 Hs.528803 NM_003366 HPRD:01876 UQCRC2 MC3DN5|QCR2|UQCR2 ubiquinol-cytochrome c reductase core protein II protein-coding 0.059459 0.586022 -32(GGCTTCGA,-,0.00) -141(TCCCGGGCCT,+,0.00) -101(AACGAGGCCC,-,0.00) 561_WT_peak_5136 chr3 57678611 57678855 + 44 NA promoter-TSS (NM_152678) promoter-TSS (NM_152678) 83 NM_152678 201627 Hs.91085 NM_152678 HPRD:08756 DENND6A AFI1A|FAM116A DENN/MADD domain containing 6A protein-coding 0.139344 0.755102 -31(ATCGGCCGCC,-,0.00) -14(CGTTCGCG,-,0.00) -11(TCGCGCCG,+,0.00) -83(GTCCAACG,-,0.00) 9(ACCGCGCC,+,0.00),33(TCCGCGCA,+,0.00) -115(GCCTCGCGGC,-,0.00) -67(GAGCCGGGCCCC,-,0.00) 561_WT_peak_4434 chr2 201754010 201754327 + 44 NA promoter-TSS (NM_032472) promoter-TSS (NM_032472) 60 NM_021824 60491 Hs.145284 NM_021824 HPRD:10424 NIF3L1 ALS2CR1|CALS-7 NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) protein-coding 0.066246 0.588050 -101(CGACGCGG,+,0.00),-16(CTTCGCGG,+,0.00) 561_WT_peak_3226 chr17 46518476 46518661 + 44 NA Intergenic Intergenic -3627 NR_110804 101927166 Hs.149244 NR_110804 LOC101927166 - uncharacterized LOC101927166 ncRNA 0.000000 0.376344 561_WT_peak_1039 chr10 73486968 73487072 + 44 NA intron (NM_001171930, intron 29 of 30) MIR|SINE|MIR -7442 NM_001164375 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding 0.009615 0.561905 561_WT_peak_4768 chr21 33103782 33104303 + 44 NA 5' UTR (NM_001145445, exon 1 of 20) 5' UTR (NM_001145445, exon 1 of 20) 389 NM_001145445 57466 Hs.17255 NM_020706 HPRD:11551 SCAF4 SFRS15|SRA4 SR-related CTD-associated factor 4 protein-coding 0.126679 0.739464 -94(CGCCCCGGAACC,+,0.00) 225(GGCGGCCGAG,+,0.00) 334(TGGCGGCT,+,0.00) -98(CCGCCGCCCCGG,+,0.00) 42(GGCGTTGA,-,0.00),51(GGCGTCCA,-,0.00),163(GGCGACGA,-,0.00) 184(AGGCCCGGGC,-,0.00) 153(GCCGGGGG,+,0.00) 108(TCGCGCCG,+,0.00) 259(CCCTCTCAGTCC,+,0.00) 179(GTCCGAGG,-,0.00) -110(TCCGCGCA,+,0.00) -122(CACAGGCCCCGC,-,0.00),-106(CGCAGGCCCCGC,-,0.00),82(CTCCGGGCCCGC,-,0.00),295(GCGGCGGCAGCG,+,0.00) -116(CCCCGCTCCGCG,-,0.00) 218(CGAGGCGG,+,0.00) -101(GCCCCGCCGC,-,0.00),115(GCGGCGGAGC,+,0.00),214(GCGGCGAGGC,+,0.00) 138(CAGCCGGGCCTG,-,0.00) 561_WT_peak_3928 chr19 58666432 58666635 + 44 NA Intergenic CpG -4385 NM_024620 79673 Hs.458377 NM_024620 HPRD:07779 ZNF329 - zinc finger protein 329 protein-coding 0.118227 0.705882 -52(CCCGCGGC,-,0.00) -140(CGCCGGAC,+,0.00) -96(GCTGCGCA,+,0.00),-47(GGCGCGGC,-,0.00) -50(CGCGGCGCGGCG,+,0.00),-50(CGCGGCGCGGCG,-,0.00) -153(CCGCCAAG,-,0.00),-7(CCGCGACG,-,0.00) -154(CCCGCCAAGGCG,+,0.00),-152(CGCCAAGGCGGA,-,0.00) 561_WT_peak_3782 chr19 42772636 42772879 + 44 NA Intergenic CpG -13441 NM_006494 2077 Hs.655969 NM_006494 HPRD:09942 ERF CRS4|PE-2|PE2 Ets2 repressor factor protein-coding 0.074074 0.618852 -77(GCGACGCC,+,0.00),-21(GGCGTCCA,-,0.00) -113(TCGTGCCG,+,0.00) -157(GCGGGGCTCGCG,+,0.00) -160(GCTGCGGGGC,+,0.00) 561_WT_peak_4417 chr2 197105039 197105214 + 44 NA intron (NM_020760, intron 21 of 28) intron (NM_020760, intron 21 of 28) -19622 NR_110225 101927482 Hs.191841 NR_110225 ENSG00000229056 LOC101927482 - uncharacterized LOC101927482 ncRNA 0.022857 0.494318 -102(CAGCGACG,-,0.00) -123(ATTTCCTGTTTC,-,0.00) 561_WT_peak_1191 chr11 4115644 4116004 + 44 NA promoter-TSS (NM_001033) promoter-TSS (NM_001033) -100 NM_001033 6240 Hs.445705 NM_001033 HPRD:01588 RRM1 R1|RIR1|RR1 ribonucleotide reductase M1 protein-coding 0.075000 0.573407 133(TGGCGGCT,+,0.00) 187(AGCGTCGA,-,0.00) -104(AGGTTTTG,-,0.00) -63(GGCGGAGACGCG,+,0.00) -42(GGGCGGCGCC,+,0.00) 128(CAACATGGCGGC,-,0.00) 561_WT_peak_4548 chr20 3400947 3401131 + 44 NA Intergenic MLT1F|LTR|ERVL-MaLR -12730 NM_001009984 25943 Hs.516853 NM_001009984 ENSG00000088854 C20orf194 - chromosome 20 open reading frame 194 protein-coding 0.000000 0.464865 -135(CAAAACCA,+,0.00) 561_WT_peak_7302 chr9 75058568 75058670 + 44 NA Intergenic MER63D|DNA|hAT-Blackjack -78098 NM_138691 117531 Hs.670211 NM_138691 HPRD:05988 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel-like 1 protein-coding 0.000000 0.271845 561_WT_peak_6791 chr7 102353872 102354065 + 44 NA Intergenic Intergenic -35431 NR_026879 222234 Hs.202543 NM_147194 FAM185A - family with sequence similarity 185, member A protein-coding 0.005181 0.417526 -60(AAAATAGGAAGC,+,0.00) 561_WT_peak_4875 chr22 30579860 30580134 + 44 NA Intergenic Intergenic 62843 NM_001257135 3976 Hs.2250 NM_002309 HPRD:08869 LIF CDF|DIA|HILDA|MLPLI leukemia inhibitory factor protein-coding 0.007299 0.414545 51(CGGTTAAA,+,0.00) -145(GGGCAGATTT,+,0.00) 561_WT_peak_1398 chr11 68606371 68606545 + 44 NA intron (NM_001031847, intron 1 of 18) intron (NM_001031847, intron 1 of 18) 2941 NM_001876 1374 Hs.503043 NM_001876 HPRD:02755 CPT1A CPT1|CPT1-L|L-CPT1 carnitine palmitoyltransferase 1A (liver) protein-coding 0.017241 0.360000 -90(AGGCCTCT,+,0.00) 561_WT_peak_744-2 chr1 224370479 224370483 + 44 NA promoter-TSS (NM_003676) promoter-TSS (NM_003676) -429 NM_003676 8560 Hs.299878 NM_003676 HPRD:13133 DEGS1 DEGS|DEGS-1|DES1|Des-1|FADS7|MLD delta(4)-desaturase, sphingolipid 1 protein-coding 0.000000 0.400000 561_WT_peak_4005 chr2 28474346 28474456 + 44 NA intron (NM_199193, intron 11 of 13) intron (NM_199193, intron 11 of 13) -44573 NR_120504 100505736 Hs.659540 NR_120504 LOC100505736 - uncharacterized LOC100505736 ncRNA 0.036364 0.486486 561_WT_peak_7302-2 chr9 75058738 75058738 + 44 NA Intergenic MER63D|DNA|hAT-Blackjack -77979 NM_138691 117531 Hs.670211 NM_138691 HPRD:05988 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel-like 1 protein-coding 0.000000 1.000000 561_WT_peak_4660 chr20 47335639 47335812 + 44 NA intron (NM_020820, intron 5 of 39) intron (NM_020820, intron 5 of 39) 108695 NM_020820 57580 Hs.153310 NM_020820 HPRD:06066 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding 0.011561 0.477011 561_WT_peak_581 chr1 161015366 161015555 + 44 NA promoter-TSS (NM_001276373) promoter-TSS (NM_001276373) 309 NM_007122 7391 Hs.414880 NM_007122 HPRD:01880 USF1 FCHL|FCHL1|HYPLIP1|MLTF|MLTFI|UEF|bHLHb11 upstream transcription factor 1 protein-coding 0.063492 0.657895 -90(AGGGCTGGGA,-,0.00) -130(CCGGTGCCGGCG,+,0.00) -118(GCTGCGGCGC,+,0.00),-87(GCTGGGACGC,+,0.00) 561_WT_peak_7288 chr9 71589446 71589520 + 44 NA intron (NR_110647, intron 1 of 2) intron (NR_110647, intron 1 of 2) 1274 NR_110647 101927069 Hs.663405 NR_110647 LOC101927069 - uncharacterized LOC101927069 ncRNA 0.027027 0.480000 -120(GGTGTCGA,-,0.00) 561_WT_peak_706 chr1 206976824 206976994 + 44 NA intron (NM_153758, intron 1 of 5) intron (NM_153758, intron 1 of 5) 4694 NM_153758 29949 Hs.661017 NM_013371 HPRD:05747 IL19 IL-10C|MDA1|NG.1|ZMDA1 interleukin 19 protein-coding 0.005882 0.532164 -10(GGGCTGATGGGG,-,0.00) -86(AAAGAGGCCC,-,0.00) 561_WT_peak_4908 chr22 38004371 38005087 + 44 NA promoter-TSS (NM_001172688) promoter-TSS (NM_001172688) 248 NM_001172687 26088 Hs.499158 NM_013365 HPRD:12078 GGA1 - golgi-associated, gamma adaptin ear containing, ARF binding protein 1 protein-coding 0.101955 0.680614 347(GGAGCCGGAGAC,+,0.00),401(CGGACCGGAACC,+,0.00),407(GGAACCGGAACC,+,0.00) 296(GCGGGGGGGCGG,-,0.00),384(CCGGGAGGGGCG,-,0.00),434(GCCCCTTCCCGG,+,0.00),479(CCCCGCCCCCGG,+,0.00),492(CCGGGAGGGGCG,-,0.00) 146(TAGACGCC,+,0.00) 510(TCAGTCGG,-,0.00) 295(GGCGGGGG,+,0.00),444(GGCGGGGG,+,0.00),484(CCCCCGGC,-,0.00) 213(TGGTGCCG,+,0.00),421(GGGCACGA,-,0.00) 493(CGGGAGGGGCGG,+,0.00) 445(GCGGGGGCGGGG,+,0.00),473(CTCACGCCCCGC,-,0.00) 426(CGAGGCGG,+,0.00) 286(GCTGCGGGGG,+,0.00) 561_WT_peak_744 chr1 224370296 224370433 + 44 NA promoter-TSS (NM_003676) promoter-TSS (NM_003676) -546 NM_003676 8560 Hs.299878 NM_003676 HPRD:13133 DEGS1 DEGS|DEGS-1|DES1|Des-1|FADS7|MLD delta(4)-desaturase, sphingolipid 1 protein-coding 0.007299 0.413043 561_WT_peak_4924 chr22 40236238 40236465 + 44 NA intron (NM_152512, intron 3 of 6) intron (NM_152512, intron 3 of 6) 53443 NM_152512 150350 Hs.474869 NM_152512 HPRD:08063 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding 0.017621 0.403509 -60(CCCACTGAGCCC,+,0.00) 561_WT_peak_2348 chr14 95989708 95989934 + 44 NA Intergenic Intergenic 10145 NR_003002 677768 Hs.448753 NR_003002 ENSG00000252481 SCARNA13 U93 small Cajal body-specific RNA 13 ncRNA 0.013274 0.436123 -59(TGGTTTTG,-,0.00) 561_WT_peak_541 chr1 154531342 154531537 + 44 NA promoter-TSS (NM_017582) promoter-TSS (NM_017582) -319 NM_017582 55585 Hs.607928 NM_017582 HPRD:15601 UBE2Q1 GTAP|NICE-5|UBE2Q ubiquitin-conjugating enzyme E2Q family member 1 protein-coding 0.117949 0.719388 -73(GCGACGCC,+,0.00) -10(CCCGCGCA,+,0.00) -140(CCGGGGCCTGGG,+,0.00),14(CCCGGGCGCCGC,-,0.00) -37(CTCGGTGCCGCG,+,0.00) 561_WT_peak_236 chr1 52522009 52522371 + 44 NA promoter-TSS (NR_046406) promoter-TSS (NR_046406) 333 NM_152265 91408 Hs.429839 NM_152265 HPRD:17521 BTF3L4 - basic transcription factor 3-like 4 protein-coding 0.085635 0.710744 -85(AGGCCGCT,+,0.00),10(AGGCGGCT,+,0.00) 149(TGGACGCC,+,0.00) -115(CCCCCGGC,-,0.00),-65(CCCCCGCC,-,0.00) -162(TCTTGCCG,+,0.00) -80(GCTGCGCA,+,0.00),120(GCCGCCCA,+,0.00) 39(GCGGCGCAGC,+,0.00),39(GCGGCGCAGC,-,0.00) 561_WT_peak_2197 chr14 50329816 50330022 + 44 NA Intergenic Intergenic -10380 NM_004713 9147 Hs.655964 NM_004713 HPRD:08494 NEMF NY-CO-1|SDCCAG1 nuclear export mediator factor protein-coding 0.048544 0.478261 561_WT_peak_5093 chr3 47823340 47823730 + 44 NA promoter-TSS (NM_003074) promoter-TSS (NM_003074) -130 NM_003074 6599 Hs.476179 NM_003074 HPRD:03435 SMARCC1 BAF155|CRACC1|Rsc8|SRG3|SWI3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 protein-coding 0.112821 0.662404 45(CCGCCATCCTCC,+,0.00) 31(CTCAGCCGCC,-,0.00) -130(AGCCGCCA,-,0.00),34(AGCCGCCT,-,0.00) 117(GACGTCGA,-,0.00) -83(CGCGGACG,+,0.00),-26(CGCACGCG,-,0.00) -114(TCCCGGCCCC,+,0.00) -77(CGCCCGGC,-,0.00) -6(TCGTGCGG,+,0.00) 36(CCGCCTCTTCCG,-,0.00) 107(CCTCGCTA,+,0.00),113(TACCGACG,-,0.00) 85(CGGTTTTT,-,0.00) -114(TCCCGGCCCCGC,-,0.00),-76(GCCCGGCCCCGC,-,0.00) -135(CGCGTAGCCGCC,+,0.00) -117(GCTTCCCGGC,-,0.00) 561_WT_peak_3374 chr17 78235360 78235545 + 44 NA intron (NM_020954, intron 1 of 16) intron (NM_020954, intron 1 of 16) 792 NM_020954 57674 Hs.195642 NM_020914 HPRD:10716 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding 0.021622 0.526882 -80(AAGCGGAT,+,0.00) 13(GCCGGGCG,+,0.00) -88(AAGACAGGAAGC,+,0.00) 561_WT_peak_6993 chr8 41998035 41998170 + 44 NA Intergenic CpG -12362 NM_001134296 10947 Hs.654529 NM_006803 HPRD:09801 AP3M2 AP47B|CLA20|P47B adaptor-related protein complex 3, mu 2 subunit protein-coding 0.118519 0.676471 -145(CAGCGCCACCCT,+,0.00) -126(CGCCCGGC,-,0.00) -72(CTCGGCCCCGCG,-,0.00) 561_WT_peak_2526 chr15 67393633 67393826 + 44 NA intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) -24325 NM_001145102 4088 Hs.727986 NM_005902 HPRD:04380 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding 0.005181 0.438144 -118(AGGGTAAA,+,0.00) 561_WT_peak_2923 chr16 81041285 81041476 + 44 NA promoter-TSS (NM_020188) promoter-TSS (NM_020188) -878 NM_020188 56942 Hs.55028 NM_020188 CMC2 2310061C15Rik|C16orf61 C-x(9)-C motif containing 2 protein-coding 0.041885 0.458333 -14(GGCGCGGT,-,0.00) 561_WT_peak_6732 chr7 76256425 76256774 + 44 NA promoter-TSS (NM_012230) promoter-TSS (NM_012230) 21 NM_152992 22932 Hs.488877 NM_012230 HPRD:15974 POMZP3 POM-ZP3|POM121 POM121 and ZP3 fusion protein-coding 0.140401 0.700000 -129(GTAGGAGGCCGA,-,0.00) -69(ATCGGCCGCC,-,0.00) 82(AGACGCTA,-,0.00) 140(TCAACGCC,+,0.00) -143(AGGCACGA,-,0.00) 115(CTGTTTTG,-,0.00) 24(ACCGCGCC,+,0.00) -19(CGCGGCTCCGCG,+,0.00),-19(CGCGGCTCCGCG,-,0.00) -100(AGCGCCGCCC,-,0.00) -106(CCGAGAAG,-,0.00),53(CCGCCACG,-,0.00),72(CGACTCGG,+,0.00) -97(GCCGCCCCGGCC,+,0.00) 90(CAGCCCGGCAGC,-,0.00) 561_WT_peak_1023 chr10 70286964 70287395 + 43 NA 5' UTR (NM_152707, exon 1 of 9) 5' UTR (NM_152707, exon 1 of 9) 101 NM_152707 8034 Hs.180408 NM_152707 SLC25A16 D10S105E|GDA|GDC|HGT.1|ML7|hML7 solute carrier family 25 (mitochondrial carrier), member 16 protein-coding 0.109049 0.717593 -37(ATCGGCCGCC,-,0.00) -96(AAGTCTCT,+,0.00) 95(CCGCCCCGCCGG,+,0.00),192(CCGGGAGGGGCG,-,0.00),246(CCTCCATCCCGC,+,0.00) -8(TCGCCGCC,+,0.00) -23(GGGCTGCCGCGG,-,0.00) 157(AGGGCGGGGC,-,0.00) 193(CGGGAGGGGCGG,+,0.00) 128(GGCGCGGC,-,0.00) 131(GCGGCGCCGGCT,+,0.00),160(GCGGGGCCTGTG,+,0.00),201(GCGGGGCCAGGA,+,0.00) -30(GCCGCCAGGGCT,+,0.00),-28(CGCCAGGGCTGC,-,0.00) 561_WT_peak_1557 chr12 4616101 4616330 + 43 NA intron (NM_020374, intron 9 of 13) intron (NM_020374, intron 9 of 13) 31422 NM_020374 57102 Hs.302977 NM_020374 HPRD:12609 C12orf4 - chromosome 12 open reading frame 4 protein-coding 0.008734 0.369565 27(TCCTCCTCCTCC,+,0.00) 561_WT_peak_5823 chr5 76151793 76152144 + 43 NA intron (NM_130772, intron 1 of 4) MSTA|LTR|ERVL-MaLR 6142 NM_130772 170591 Hs.482563 NM_130772 S100Z Gm625|S100-zeta S100 calcium binding protein Z protein-coding 0.008547 0.488636 -78(TCCTCCTCCTCC,+,0.00) 561_WT_peak_1504 chr11 118747539 118747732 + 43 NA Intergenic Intergenic -6840 NM_001716 643 Hs.113916 NM_001716 CXCR5 BLR1|CD185|MDR15 chemokine (C-X-C motif) receptor 5 protein-coding 0.025907 0.582474 -159(GGCCGACG,-,0.00) -63(TCTACCTGTTTC,-,0.00) -133(GCCCCCATGACC,+,0.00) 561_WT_peak_7496 chrX 3661893 3662080 + 43 NA Intergenic Intergenic -30311 NM_005044 5613 Hs.390788 NM_005044 HPRD:02097 PRKX PKX1 protein kinase, X-linked protein-coding 0.010695 0.446809 561_WT_peak_1415 chr11 75140907 75141080 + 43 NA exon (NM_001039548, exon 1 of 6) exon (NM_001039548, exon 1 of 6) 681 NM_001039548 283212 Hs.292451 NM_173583 HPRD:08747 KLHL35 - kelch-like family member 35 protein-coding 0.150289 0.752874 -108(GGCGTCGC,-,0.00) -76(TCGTGGCG,+,0.00) -17(CGCGGGGTCCGC,-,0.00) -62(GCGCATGGCCGC,-,0.00) -107(GCGTCGCAGC,-,0.00) 561_WT_peak_7037 chr8 66754455 66754705 + 43 NA promoter-TSS (NM_001242318) promoter-TSS (NM_001242318) -611 NM_001242318 5150 Hs.527119 NM_002603 PDE7A HCP1|PDE7 phosphodiesterase 7A protein-coding 0.112000 0.665339 -55(CGCGTGCG,+,0.00) 32(TCGTCCCG,+,0.00) -64(CAGCCAAGGCGC,-,0.00) 561_WT_peak_4502 chr2 234941171 234941444 + 43 NA Intergenic Intergenic -18039 NM_006944 6694 Hs.444488 NM_006944 HPRD:04029 SPP2 SPP-24|SPP24 secreted phosphoprotein 2, 24kDa protein-coding 0.003663 0.379562 -29(CAATACCG,+,0.00) 561_WT_peak_6394 chr6 90062012 90062426 + 43 NA intron (NM_016021, intron 1 of 7) CpG 400 NM_016021 51465 Hs.163776 NM_016021 HPRD:15599 UBE2J1 HSPC153|HSPC205|HSU93243|NCUBE-1|NCUBE1|UBC6|Ubc6p ubiquitin-conjugating enzyme E2, J1 protein-coding 0.111111 0.742169 46(CCGCCCTCCTCG,+,0.00) -62(CCGGGCAGGCGG,-,0.00),133(CCGGCCTCCCGG,+,0.00),134(CGGCCTCCCGGG,+,0.00) 15(GGCGGCGA,-,0.00) 63(GGGCCCCAGCCC,+,0.00) 195(TCGGGCGG,-,0.00) -119(GCCGGGGG,+,0.00) 233(GCCGCCCA,+,0.00) -23(AGCTGAGCCGCG,+,0.00),215(CGAGGAGCCTCG,+,0.00) 12(CGAGGCGG,+,0.00) -139(GCTGCGGGGC,+,0.00) 205(GGGGCCTGGCCG,+,0.00) 561_WT_peak_3455 chr18 19192556 19192683 + 43 NA intron (NM_006938, intron 1 of 3) intron (NM_006938, intron 1 of 3) 389 NM_006938 6632 Hs.464734 NM_006938 HPRD:03040 SNRPD1 HsT2456|SMD1|SNRPD|Sm-D1 small nuclear ribonucleoprotein D1 polypeptide 16kDa protein-coding 0.062992 0.585938 -70(AGAGGCTT,-,0.00) 561_WT_peak_2004 chr13 41557188 41557224 + 43 NA promoter-TSS (NM_001145353) promoter-TSS (NM_001145353) -788 NM_001145353 1997 Hs.135646 NM_172373 HPRD:01808 ELF1 - E74-like factor 1 (ets domain transcription factor) protein-coding 0.000000 0.405405 561_WT_peak_829 chr1 245026961 245027290 + 43 NA exon (NM_004501, exon 1 of 14) exon (NM_004501, exon 1 of 14) 702 NM_004501 3192 Hs.106212 NM_004501 HPRD:04185 HNRNPU HNRPU|SAF-A|U21.1|hnRNP U heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) protein-coding 0.124620 0.724242 105(GCGGCCTCCTCC,+,0.00),111(TCCTCCTCCTCC,+,0.00) 134(GTCGGCCGCC,-,0.00) 139(CCGCCCCCGCGG,+,0.00) 21(TCGTCGCC,+,0.00),81(TCGTCGCC,+,0.00) -69(CCCGCGGC,-,0.00),144(CCCGCGGC,-,0.00) -138(TGCTGGCCCTGC,-,0.00),-116(GCGGCGCCACCG,+,0.00),137(GGCCGCCCCCGC,-,0.00) -55(GGCGGCCCCGCG,-,0.00) -118(GGGCGGCGCC,+,0.00) -58(CTTGGCGG,+,0.00),101(CGAGGCGG,+,0.00),130(CCGAGTCG,-,0.00),131(CGAGTCGG,+,0.00) -61(CTCCTTGGCGGC,-,0.00) 561_WT_peak_5528 chr4 84133352 84133545 + 43 NA Intergenic L2a|LINE|L2 72619 NM_015697 27235 Hs.144304 NM_015697 HPRD:13062 COQ2 CL640|COQ10D1|MSA1 coenzyme Q2 4-hydroxybenzoate polyprenyltransferase protein-coding 0.015544 0.448454 561_WT_peak_1745 chr12 59991189 59991358 + 43 NA intron (NM_001270622, intron 1 of 5) intron (NM_001270622, intron 1 of 5) 1452 NM_001270623 9194 Hs.88156 NM_004731 HPRD:06791 SLC16A7 MCT2 solute carrier family 16 (monocarboxylate transporter), member 7 protein-coding 0.000000 0.464706 561_WT_peak_1757 chr12 68683990 68684169 + 43 NA Intergenic Intergenic -36798 NM_020525 50616 Hs.287369 NM_020525 HPRD:05621 IL22 IL-21|IL-22|IL-D110|IL-TIF|ILTIF|TIFIL-23|TIFa|zcyto18 interleukin 22 protein-coding 0.016760 0.377778 561_WT_peak_6279 chr6 31632673 31632902 + 43 NA promoter-TSS (NM_001320) promoter-TSS (NM_001320) 392 NM_033177 7918 Hs.247478 NM_033177 HPRD:00810 GPANK1 ANKRD59|BAT4|D6S54E|G5|GPATCH10 G patch domain and ankyrin repeats 1 protein-coding 0.061135 0.504348 -13(AGACGCAT,-,0.00) -21(CGGCACGA,-,0.00) 561_WT_peak_2992 chr17 4693293 4693464 + 43 NA exon (NM_001014985, exon 4 of 4) exon (NM_001014985, exon 4 of 4) 1124 NM_001014985 388323 Hs.131035 NM_001014985 HPRD:18609 GLTPD2 - glycolipid transfer protein domain containing 2 protein-coding 0.134503 0.767442 -35(TCGCCTTCCTCG,+,0.00) -124(AGGCCCGGACGC,+,0.00) -26(TCGCCTTCCCGG,+,0.00) -98(GCGACGCC,+,0.00),-13(TCGCCGCC,+,0.00) -119(CGGACGCG,-,0.00) -52(CCGACAGA,+,0.00) -100(CAGCGACG,-,0.00) -54(GTCCGACA,-,0.00) -80(CCCTGGGTCCGC,-,0.00) -40(CCGCCTCG,-,0.00) -130(GCTGGGAGGC,+,0.00),-101(GCAGCGACGC,+,0.00) 561_WT_peak_7503 chrX 12996271 12996757 + 43 NA Intergenic Intergenic 3288 NM_021109 7114 Hs.437277 NM_021109 HPRD:02153 TMSB4X FX|PTMB4|TB4X|TMSB4 thymosin beta 4, X-linked protein-coding 0.022634 0.457906 -116(CAAAACCG,+,0.00),108(CAAAACCT,+,0.00) 9(TTTACCTG,-,0.00) 561_WT_peak_5055 chr3 33096760 33096968 + 43 NA intron (NM_001135602, intron 3 of 12) intron (NM_001135602, intron 3 of 12) 41429 NM_001136238 643853 Hs.443031 NM_001039770 ENSG00000170266 TMPPE - transmembrane protein with metallophosphoesterase domain protein-coding 0.019231 0.377990 561_WT_peak_3551 chr19 797302 797606 + 43 NA promoter-TSS (NM_031991) promoter-TSS (NM_031991) 62 NM_002819 5725 Hs.172550 NM_002819 HPRD:02823 PTBP1 HNRNP-I|HNRNPI|HNRPI|PTB|PTB-1|PTB-T|PTB2|PTB3|PTB4|pPTB polypyrimidine tract binding protein 1 protein-coding 0.131579 0.760656 67(CCGCCCTCCCCG,+,0.00),106(CCGGCCTCCCCG,+,0.00),107(CGGCCTCCCCGG,+,0.00) -30(TGGGTCGG,-,0.00) -148(GGCGGGGG,+,0.00),92(CCCCCGCC,-,0.00) -107(GGGAGCCAATGG,+,0.00) 100(GCCGCGCC,+,0.00) 68(CGCCCTCCCCGC,-,0.00),87(CCCTGCCCCCGC,-,0.00) 118(GGGCCGATCT,+,0.00) 78(GCGCCGCAGC,-,0.00) -123(GCCCCCTGGCTG,+,0.00) 561_WT_peak_5901 chr5 131439193 131439355 + 43 NA Intergenic Intergenic 29789 NM_000758 1437 Hs.1349 NM_000758 HPRD:00734 CSF2 GMCSF colony stimulating factor 2 (granulocyte-macrophage) protein-coding 0.000000 0.484663 561_WT_peak_2572 chr15 81293287 81293682 + 43 NA 5' UTR (NM_022566, exon 1 of 1) 5' UTR (NM_022566, exon 1 of 1) 189 NM_022566 59274 Hs.513071 NM_022566 HPRD:11300 MESDC1 - mesoderm development candidate 1 protein-coding 0.129114 0.729798 114(TGGCCCGGTGGC,+,0.00) -131(CCGGGGGCGAGG,-,0.00) -141(GGCGGCGA,-,0.00) -119(CGCGGACG,+,0.00) 31(TCGCTCGG,-,0.00) 1(CCCCCGCC,-,0.00),94(GCCGCGGG,+,0.00) 134(TCGTGCAG,+,0.00) 146(GTCCGATG,-,0.00) -6(CTTTCGGCCCCC,-,0.00) 152(TGCGCGGG,-,0.00) -149(GCGGCGGCGGCG,+,0.00),-146(GCGGCGGCGGCG,+,0.00),68(CCGGGGCCCGGG,+,0.00),154(CGCGGGGCCCGG,-,0.00),155(GCGGGGCCCGGG,+,0.00) 88(CGCAGCGCCGCG,+,0.00),88(CGCAGCGCCGCG,-,0.00) -153(CGAGGCGG,+,0.00) -156(GGCCGAGGCGGC,-,0.00),-71(GCAGCCACGGCC,+,0.00) -79(GCGGCGGCGC,+,0.00),-76(GCGGCGCAGC,+,0.00),-76(GCGGCGCAGC,-,0.00) 561_WT_peak_2993 chr17 4851019 4851219 + 43 NA intron (NM_005022, intron 1 of 2) CpG 1262 NM_005022 5216 Hs.494691 NM_005022 HPRD:01452 PFN1 ALS18 profilin 1 protein-coding 0.055000 0.676617 -75(CGCCTGGGGCTC,-,0.00) 20(CCCTCTCAATCC,+,0.00) -73(CCTGGGGCTCCC,-,0.00) -29(GCGGGCTGGCAG,+,0.00) 561_WT_peak_1808 chr12 95397341 95397541 + 43 NA promoter-TSS (NM_001258338) promoter-TSS (NM_001258338) 48 NM_018838 55967 Hs.506374 NM_018838 HPRD:16781 NDUFA12 B17.2|DAP13 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 protein-coding 0.080000 0.651741 -34(CCCGCCTCCCGG,+,0.00),-33(CCGCCTCCCGGG,+,0.00) -12(CAAAACCC,+,0.00) -41(CGCTGGCCCCGC,-,0.00) -105(ACCGCCGTGGCC,+,0.00) 561_WT_peak_6850 chr7 134143755 134144073 + 43 NA promoter-TSS (NM_001628) promoter-TSS (NM_001628) -26 NM_001628 231 Hs.521212 NM_001628 HPRD:00071 AKR1B1 ADR|ALDR1|ALR2|AR aldo-keto reductase family 1, member B1 (aldose reductase) protein-coding 0.110063 0.689655 -52(CGCGTACC,+,0.00) -85(CCCCCGCC,-,0.00) 132(CCCGCGCCCCGC,-,0.00) 2(CGCCGCTGCGCG,-,0.00) -110(TGCCATGGCTGC,-,0.00),-68(GCGGCCTTGGCC,+,0.00),-66(GGCCTTGGCCGC,-,0.00) 561_WT_peak_43 chr1 8761474 8761737 + 43 NA intron (NM_001042681, intron 1 of 22) intron (NM_001042681, intron 1 of 22) 116094 NM_012102 473 Hs.463041 NM_012102 HPRD:05566 RERE ARG|ARP|ATN1L|DNB1 arginine-glutamic acid dipeptide (RE) repeats protein-coding 0.015209 0.390152 561_WT_peak_4123 chr2 69871070 69871249 + 43 NA promoter-TSS (NM_014911) promoter-TSS (NM_014911) -182 NM_014911 22848 Hs.468878 NM_014911 AAK1 - AP2 associated kinase 1 protein-coding 0.061453 0.611111 -24(GGCCTCGA,-,0.00) 2(CGCGTATG,+,0.00) -50(CGAGGCGG,+,0.00) 561_WT_peak_5587 chr4 120988347 120988422 + 43 NA promoter-TSS (NM_002358) promoter-TSS (NM_002358) -371 NM_002358 4085 Hs.591697 NM_002358 MAD2L1 HSMAD2|MAD2 MAD2 mitotic arrest deficient-like 1 (yeast) protein-coding 0.093333 0.539474 -109(AAGCGACT,+,0.00) -100(CGTGCGCG,-,0.00) -98(TGCGCGGC,-,0.00) 561_WT_peak_5796 chr5 69881528 69881712 + 43 NA promoter-TSS (NR_027386) promoter-TSS (NR_027386) 9 NR_027386 653188 Hs.631974 NR_027386 ENSG00000253203 GUSBP3 - glucuronidase, beta pseudogene 3 pseudo 0.125000 0.767568 -20(GGGGTGGCGCGC,-,0.00) -129(GCCGCGGG,+,0.00),10(GGCGGGGG,+,0.00) -74(TGGGCGGT,-,0.00) -124(GGGCGGAGCT,+,0.00) -51(CCGCGTAG,-,0.00) 561_WT_peak_5831 chr5 79286078 79286253 + 43 NA intron (NM_001167741, intron 1 of 7) intron (NM_001167741, intron 1 of 7) 923 NM_001167741 345778 Hs.531418 NM_001010891 MTX3 - metaxin 3 protein-coding 0.017143 0.357955 561_WT_peak_315 chr1 90308744 90308923 + 43 NA intron (NM_018103, intron 1 of 2) intron (NM_018103, intron 1 of 2) 21353 NM_018103 55144 Hs.482087 NM_018103 HPRD:11287 LRRC8D LRRC5 leucine rich repeat containing 8 family, member D protein-coding 0.033520 0.561111 -104(GGGTTGGGAGGG,-,0.00) 561_WT_peak_3146 chr17 36981603 36982031 + 43 NA promoter-TSS (NR_073428) promoter-TSS (NR_073428) -214 NR_073428 54883 Hs.406223 NM_017748 HPRD:07892 CWC25 CCDC49 CWC25 spliceosome-associated protein homolog (S. cerevisiae) protein-coding 0.067757 0.580420 141(TAGGCCTCCTCC,+,0.00) 190(AAACGGCT,+,0.00),191(AACGGCTT,-,0.00) -155(GGCGTCGC,-,0.00),-66(TCGAGGCC,+,0.00) -127(TCGGTCGC,-,0.00) -148(CGGAACGA,-,0.00) 188(CAAAACGG,+,0.00),193(CGGCTTTG,-,0.00) -162(CCGCGTCG,-,0.00),-153(CGTCGCGG,+,0.00) 68(TGCCATGGCAGC,-,0.00) 561_WT_peak_4698 chr20 54987009 54987231 + 43 NA promoter-TSS (NM_020356) promoter-TSS (NM_020356) -48 NM_001164116 57091 Hs.473144 NM_020356 HPRD:09842 CASS4 C20orf32|CAS4|HEFL|HEPL Cas scaffolding protein family member 4 protein-coding 0.018018 0.434978 -98(TCGGTTGG,-,0.00) 561_WT_peak_5783 chr5 66511815 66511991 + 43 NA Intergenic Intergenic -19286 NM_005582 4064 Hs.87205 NM_005582 HPRD:03749 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding 0.011364 0.497175 -49(AGAGACTT,-,0.00) -145(CCTCGCTA,+,0.00) 561_WT_peak_7333 chr9 92041616 92041854 + 43 NA intron (NM_006378, intron 2 of 17) intron (NM_006378, intron 2 of 17) 52876 NM_006378 10507 Hs.494406 NM_006378 HPRD:03520 SEMA4D C9orf164|CD100|M-sema-G|SEMAJ|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding 0.008403 0.447699 561_WT_peak_2506 chr15 63486274 63486416 + 43 NA intron (NM_016530, intron 1 of 7) MIR3|SINE|MIR 4617 NM_016530 51762 Hs.389733 NM_016530 HPRD:11476 RAB8B - RAB8B, member RAS oncogene family protein-coding 0.000000 0.335664 -155(CCCCTTCTTCCT,-,0.00) 561_WT_peak_3918 chr19 58011202 58011539 + 43 NA promoter-TSS (NM_198542) promoter-TSS (NM_198542) 61 NM_198542 374928 Hs.579576 NM_198542 HPRD:14655 ZNF773 ZNF419B zinc finger protein 773 protein-coding 0.115727 0.701183 125(GCGTCCTCCCGG,+,0.00),134(CGGCCTCCCCCG,+,0.00) 53(TCGGTCGT,-,0.00) -151(GTGCGACG,-,0.00) -162(TCTACCCG,-,0.00) 89(GCGGCCACGCTG,+,0.00) 561_WT_peak_3058 chr17 17991270 17991498 + 43 NA exon (NM_001388, exon 1 of 13) exon (NM_001388, exon 1 of 13) 203 NM_001388 1819 Hs.78582 NM_001388 HPRD:04286 DRG2 - developmentally regulated GTP binding protein 2 protein-coding 0.065789 0.602620 -56(TCGCTCGG,-,0.00) -22(GCCGGGCG,+,0.00) -159(CGTCAGAC,+,0.00) 561_WT_peak_4156 chr2 75185436 75185654 + 43 NA promoter-TSS (NM_019896) promoter-TSS (NM_019896) -230 NM_019896 56655 Hs.469060 NM_019896 POLE4 YHHQ1|p12 polymerase (DNA-directed), epsilon 4, accessory subunit protein-coding 0.068807 0.634703 -129(CTGTTTTG,-,0.00) -30(TCGGGGCCAGAG,+,0.00) 561_WT_peak_5873 chr5 109025720 109025905 + 43 NA 5' UTR (NM_002372, exon 1 of 22) 5' UTR (NM_002372, exon 1 of 22) 745 NM_002372 4124 Hs.432822 NM_002372 HPRD:01110 MAN2A1 AMan II|GOLIM7|MANA2|MANII mannosidase, alpha, class 2A, member 1 protein-coding 0.113514 0.704301 -103(AGCGACCT,-,0.00) -90(CCGCCTGCCCCG,+,0.00),-28(CCCCCTTCCCAG,+,0.00) -146(TCCTGCCG,+,0.00) -89(CGCCTGCCCCGC,-,0.00) 561_WT_peak_7331 chr9 91933157 91933337 + 43 NA promoter-TSS (NM_024077) promoter-TSS (NM_024077) -141 NM_001282688 79048 Hs.59804 NM_024077 HPRD:07408 SECISBP2 SBP2 SECIS binding protein 2 protein-coding 0.061111 0.618785 -156(TAGTCGCT,+,0.00) -155(AGTCGCTA,+,0.00) -7(CCCGCGCA,+,0.00) 561_WT_peak_3252 chr17 53046024 53046337 + 43 NA promoter-TSS (NM_178509) promoter-TSS (NM_178509) 54 NM_178509 252983 Hs.35199 NM_178509 HPRD:18127 STXBP4 Synip syntaxin binding protein 4 protein-coding 0.076677 0.570064 -19(GATTACGGGTAA,-,0.00) 76(CGTCCGCG,-,0.00) -14(CGGGTAAG,+,0.00) 561_WT_peak_948 chr10 33428246 33428433 + 43 NA Intergenic Intergenic -181046 NM_002211 3688 Hs.643813 NM_002211 HPRD:00628 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) protein-coding 0.026738 0.542553 561_WT_peak_2751 chr16 27561432 27561684 + 43 NA promoter-TSS (NM_001520) promoter-TSS (NM_001520) 90 NM_015202 23247 Hs.460459 NM_015202 HPRD:13806 KIAA0556 - KIAA0556 protein-coding 0.059524 0.628458 -142(GCTTCCGGTTCG,-,0.00) -147(AGGCCGCT,+,0.00) -77(CCGGGAGGTCGG,-,0.00) -44(CCGACCGC,+,0.00) 561_WT_peak_6733 chr7 76614264 76614436 + 43 NA intron (NR_023383, intron 1 of 10) intron (NR_023383, intron 1 of 10) 4211 NR_023383 441263 Hs.675888 NR_023383 ENSG00000265479 DTX2P1-UPK3BP1-PMS2P11 PMS2L11|PMS2P11|PMSR6 DTX2P1-UPK3BP1-PMS2P11 readthrough transcribed pseudogene pseudo 0.005814 0.549133 561_WT_peak_7534 chrX 47342095 47342365 + 43 NA 5' UTR (NM_007130, exon 1 of 5) 5' UTR (NM_007130, exon 1 of 5) 115 NM_007130 7592 Hs.496074 NM_007130 HPRD:02447 ZNF41 MRX89 zinc finger protein 41 protein-coding 0.081481 0.656827 12(GGCGGGCGAG,+,0.00) -154(AGCCGCCA,-,0.00) 65(CGTCCCTA,+,0.00) -121(GCGGAGCCCGCG,+,0.00) -124(GCCGCGGAGC,+,0.00) 561_WT_peak_6512 chr6 149805980 149806150 + 43 NA promoter-TSS (NM_207360) promoter-TSS (NM_207360) 83 NM_207360 340152 Hs.632618 NM_207360 ZC3H12D C6orf95|MCPIP4|TFL|dJ281H8.1|p34 zinc finger CCCH-type containing 12D protein-coding 0.041176 0.631579 -55(AGCCACTA,-,0.00),-45(AGCCACTT,-,0.00) -112(AGGCCAGGCCCC,-,0.00) 561_WT_peak_5813 chr5 74632457 74632872 + 43 NA promoter-TSS (NM_000859) promoter-TSS (NM_000859) -329 NM_000859 3156 Hs.628096 NM_000859 HPRD:00836 HMGCR LDLCQ3 3-hydroxy-3-methylglutaryl-CoA reductase protein-coding 0.062651 0.584135 -93(TCGCCGCC,+,0.00) -155(TGGGTAAA,+,0.00) 142(CCGCCTAG,-,0.00) 73(CAGCCAGGACGA,-,0.00) 561_WT_peak_1605 chr12 12627827 12628010 + 43 NA 3' UTR (NM_030640, exon 7 of 7) 3' UTR (NM_030640, exon 7 of 7) 87530 NM_030640 80824 Hs.536535 NM_030640 DUSP16 MKP-7|MKP7 dual specificity phosphatase 16 protein-coding 0.021858 0.434783 -105(ATGCGGCT,+,0.00) -4(TCGGTCTG,-,0.00) 561_WT_peak_666 chr1 197871693 197871923 + 43 NA exon (NM_001024594, exon 1 of 3) exon (NM_001024594, exon 1 of 3) 126 NM_001024594 388722 Hs.61329 NM_001024594 HPRD:18611 C1orf53 - chromosome 1 open reading frame 53 protein-coding 0.108696 0.727273 -127(CCCTCCGGGCCC,-,0.00) -153(GCCGCGCC,+,0.00) -143(GGCCCGCGTT,+,0.00) -83(GGCGGCATGGCG,+,0.00),-81(CGGCATGGCGGC,-,0.00) -17(GCCCCGCCGC,-,0.00) -74(GCGGCCAGGCAG,+,0.00) 561_WT_peak_3879 chr19 52490104 52490347 + 43 NA promoter-TSS (NM_021632) promoter-TSS (NM_021632) -146 NM_021632 59348 Hs.407694 NM_021632 HPRD:05663 ZNF350 ZBRK1|ZFQR zinc finger protein 350 protein-coding 0.053498 0.516393 -147(GGCGGCCGAG,+,0.00) -71(GCCGCGCC,+,0.00) 561_WT_peak_6194 chr6 27107326 27107504 + 43 NA TTS (NM_003495) TTS (NM_003495) 327 NM_003495 8294 Hs.248172 NM_003495 HIST1H4I H4/m|H4FM|H4M histone cluster 1, H4i protein-coding 0.050562 0.519553 -97(CGGCTAAA,+,0.00) -156(ACCGCCATGGAC,+,0.00),-126(CGCCAGGGCCGC,-,0.00) 561_WT_peak_3173 chr17 38803724 38804008 + 43 NA intron (NM_003079, intron 1 of 10) intron (NM_003079, intron 1 of 10) 237 NM_003079 6605 Hs.743978 NM_003079 HPRD:04382 SMARCE1 BAF57 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 protein-coding 0.045775 0.624561 -161(AGGTCGCT,+,0.00),6(AACCGGCT,+,0.00) 56(CCGGGAACTCGG,-,0.00) 100(CCCACCGA,+,0.00) -34(CCCTCCCAACCC,+,0.00) 19(CTCTGGCCCCAC,-,0.00) 561_WT_peak_358 chr1 109642746 109643026 + 43 NA promoter-TSS (NR_003023) promoter-TSS (NR_003023) 71 NR_003023 677766 Hs.550815 NR_003023 ENSG00000270066 SCARNA2 HBII-382|mgU2-25/61 small Cajal body-specific RNA 2 ncRNA 0.096429 0.647687 -80(AGCGGCCT,-,0.00) -44(GGCGTCGC,-,0.00) -116(CGGGGGGAGCGG,+,0.00),61(CCCCTCCTCCCG,-,0.00) 15(TGCGCGCT,-,0.00) -117(GCGGGGGGAGCG,+,0.00) -79(GCGGCCTGGGTC,+,0.00) 561_WT_peak_2670 chr16 3285154 3285383 + 43 NA promoter-TSS (NM_001145447) promoter-TSS (NM_001145447) -82 NM_003454 7752 Hs.632222 NM_003454 HPRD:04452 ZNF200 - zinc finger protein 200 protein-coding 0.069869 0.634783 -93(GTTTCCGGTGCA,-,0.00) -140(CTGGGAAGTCGG,-,0.00) -108(CACAACCG,+,0.00) 561_WT_peak_2272 chr14 71288709 71288902 + 43 NA Intergenic CpG -12917 NM_033141 4293 Hs.445496 NM_033141 HPRD:15965 MAP3K9 MEKK9|MLK1|PRKE1 mitogen-activated protein kinase kinase kinase 9 protein-coding 0.124352 0.726804 -113(GCCGGGGG,+,0.00) -65(CCCGCGCA,+,0.00) -87(CGCGGCTTCGGG,-,0.00) -76(GGCCGTGGCGTC,-,0.00) 561_WT_peak_4115 chr2 68384484 68384694 + 43 NA promoter-TSS (NM_020143) promoter-TSS (NM_020143) 89 NR_046234 116143 Hs.631877 NM_138458 HPRD:14012 WDR92 - WD repeat domain 92 protein-coding 0.047619 0.559242 -27(CAAAAACG,+,0.00) 561_WT_peak_6316 chr6 40996086 40996258 + 43 NA exon (NM_173561, exon 9 of 9) exon (NM_173561, exon 9 of 9) -5153 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA 0.087209 0.699422 -24(TAGCCGCT,+,0.00) -77(GGGCTGCCGCCG,-,0.00) -119(TCCAGGCCCT,+,0.00) 561_WT_peak_866 chr10 6205815 6206123 + 43 NA intron (NM_001282630, intron 1 of 14) CpG -11744 NR_039698 100628560 NR_039698 MIR3155B hsa-mir-3155b microRNA 3155b ncRNA 0.097403 0.660194 -117(CGCTGGGCCCCC,-,0.00) -19(AAATAGGCCC,-,0.00) -60(CCGAGAAG,-,0.00) 97(GCGGCCCGGGCG,+,0.00) 561_WT_peak_905 chr10 18940710 18940752 + 43 NA promoter-TSS (NM_182543) promoter-TSS (NM_182543) -165 NM_182543 221078 Hs.396175 NM_182543 HPRD:14843 NSUN6 4933414E04Rik|ARL5B-AS1|NOPD1 NOP2/Sun domain family, member 6 protein-coding 0.071429 0.511628 561_WT_peak_2538 chr15 70053353 70053561 + 43 NA Intergenic Intergenic -74116 NR_026764 414926 Hs.569502 NR_026764 ENSG00000259703 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA 0.009615 0.483254 561_WT_peak_7520 chrX 39169008 39169208 + 43 NA intron (NR_038968, intron 2 of 3) intron (NR_038968, intron 2 of 3) 17508 NR_038968 286442 Hs.638478 NR_038968 ENSG00000235304 LINC01281 - long intergenic non-protein coding RNA 1281 ncRNA 0.015000 0.472637 -152(GCTTCCTGTGTT,-,0.00) 561_WT_peak_1624 chr12 19592469 19592919 + 43 NA promoter-TSS (NM_001114176) promoter-TSS (NM_001114176) 86 NM_153207 121536 Hs.126497 NM_153207 AEBP2 - AE binding protein 2 protein-coding 0.113333 0.753880 -78(GGAGGGGGGCGA,-,0.00),-32(GGAGGAGGAGGA,-,0.00),-29(GGAGGAGGAGGA,-,0.00),-26(GGAGGAGGAGGA,-,0.00),-23(GGAGGAGGAGGA,-,0.00),111(GGAGGAGGAGGA,-,0.00),126(GGAGGAGGAGGA,-,0.00),144(GGCGGAGGCCGA,-,0.00) 147(GGAGGCCGAG,+,0.00),196(GGCGGCGGAG,+,0.00),208(GGCGGCGGAG,+,0.00) 107(CCGAGGAGGAGG,-,0.00) -104(GGCGTCGG,-,0.00),226(GGCGGCGA,-,0.00) 264(GAGCGCCAGCCA,+,0.00) 62(CCCCCGGC,-,0.00) 6(CGCCGCTA,+,0.00) -106(GCGGCGTCGGCG,+,0.00),-12(AGCAGGCGCCGC,-,0.00),87(GCGGGGCCGGGC,+,0.00) 86(CGCGGGGCCGGG,+,0.00) 90(GGGCCGGGCT,+,0.00) 153(CGAGGCGG,+,0.00) -5(GCCGCCATGGCC,+,0.00),-3(CGCCATGGCCGC,-,0.00),16(ACCGACATGGCC,+,0.00) -114(GCTCTGCAGC,-,0.00),227(GCGGCGAGGC,+,0.00) 89(GGGGCCGGGCTG,+,0.00),270(CAGCCAGGCCGG,-,0.00) 561_WT_peak_6969 chr8 29991371 29991560 + 43 NA intron (NM_001100916, intron 2 of 2) MER65A|LTR|ERV1 10735 NM_001100916 619373 Hs.627194 NM_001100916 ENSG00000177669 MBOAT4 GOAT|OACT4 membrane bound O-acyltransferase domain containing 4 protein-coding 0.000000 0.421053 1(AGCCACTT,-,0.00) 561_WT_peak_178 chr1 36396702 36397191 + 43 NA 5' UTR (NM_024852, exon 1 of 19) 5' UTR (NM_024852, exon 1 of 19) 263 NM_177422 192669 Hs.657659 NM_024852 HPRD:09558 AGO3 EIF2C3 argonaute RISC catalytic component 3 protein-coding 0.120654 0.718367 310(TCGCCCTGCTCC,+,0.00) -113(GGCGGCCGCG,+,0.00) 167(AATCGGCT,+,0.00) 247(CCTCCCGCCCGG,+,0.00) 35(TCGCCGCC,+,0.00) -21(CGTCCGCG,-,0.00) 280(TCGGGCGG,-,0.00),291(TCGCTCGG,-,0.00) 301(TCCCGCCCCT,+,0.00) -109(GCCGCGGG,+,0.00),41(CCCCCGCC,-,0.00),252(CGCCCGGC,-,0.00) 77(TCGCGCCG,+,0.00) 242(CTGCTCCTCCCG,-,0.00) 278(CGTCGGGC,+,0.00) 36(CGCCGCCCCCGC,-,0.00) 52(GGGCCGAGTG,+,0.00),166(AAATCGGCTC,-,0.00) 44(CCGCCTCG,-,0.00),82(CCGCGTCG,-,0.00) 172(GCTCCGCAGG,-,0.00) 91(CCCCCGGGCCGC,-,0.00) 561_WT_peak_3300 chr17 62223717 62223905 + 43 NA TTS (NR_004380) TTS (NR_004380) 112 NR_002995 677842 Hs.405444 NR_002995 ENSG00000266402 SNORA76C ACA62|SNORA76 small nucleolar RNA, H/ACA box 76C snoRNA 0.090426 0.613757 -145(GCCGGGGG,+,0.00) -152(TCGTGGCG,+,0.00) -7(CTGTTTTG,-,0.00) -69(TTTAACCG,-,0.00) 561_WT_peak_4106 chr2 65215298 65215560 + 43 NA promoter-TSS (NM_001193493) promoter-TSS (NM_001193493) -150 NM_001193493 6509 Hs.654352 NM_003038 HPRD:02576 SLC1A4 ASCT1|SATT solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 protein-coding 0.038168 0.429658 -16(CCAAACCG,+,0.00) 561_WT_peak_4872 chr22 30147305 30147385 + 43 NA intron (NM_001003692, intron 1 of 5) MIR|SINE|MIR 15624 NM_019103 55954 Hs.713647 NM_019103 HPRD:14247 ZMAT5 SNRNP20 zinc finger, matrin-type 5 protein-coding 0.012500 0.456790 561_WT_peak_2330 chr14 91544797 91545077 + 43 NA Intergenic Intergenic -17944 NM_004755 9252 Hs.510225 NM_004755 HPRD:06789 RPS6KA5 MSK1|MSPK1|RLPK ribosomal protein S6 kinase, 90kDa, polypeptide 5 protein-coding 0.014286 0.441281 81(GGGTTTTG,-,0.00) 561_WT_peak_7567 chrX 67718943 67719124 + 43 NA intron (NM_001195214, intron 1 of 5) CpG 409 NM_173834 286451 Hs.82719 NM_173834 HPRD:06639 YIPF6 FinGER6 Yip1 domain family, member 6 protein-coding 0.055249 0.648352 -41(CGCCCGGC,-,0.00) -23(TGTACCCG,-,0.00) -155(CGCCCAGGCCCC,-,0.00) 561_WT_peak_2032 chr13 46626674 46627015 + 43 NA promoter-TSS (NR_046227) promoter-TSS (NR_046227) 52 NM_015070 23091 Hs.136102 NM_015070 HPRD:08307 ZC3H13 KIAA0853 zinc finger CCCH-type containing 13 protein-coding 0.073314 0.587719 -154(AACCGGCT,+,0.00),-4(AGGCCGCT,+,0.00) -127(CCGGGATGGCTG,-,0.00) -140(TAGCGAGG,-,0.00) -119(GCTGAGAAGC,+,0.00) -9(CTACCAGGCCGC,-,0.00) 561_WT_peak_3019 chr17 7518608 7518734 + 43 NA promoter-TSS (NM_004860) promoter-TSS (NM_004860) -456 NM_004860 9513 Hs.52788 NM_004860 HPRD:05629 FXR2 FMR1L2|FXR2P fragile X mental retardation, autosomal homolog 2 protein-coding 0.063492 0.511811 -64(CGCACGCG,-,0.00) -50(TTTACCCT,-,0.00) 561_WT_peak_515 chr1 150533987 150534162 + 43 NA TTS (NM_019032) TTS (NM_019032) 9669 NR_036211 100422997 NR_036211 miRBase:MI0015856 MIR4257 - microRNA 4257 ncRNA 0.062857 0.659091 -129(GGCCTGAGAGGG,-,0.00) 561_WT_peak_6910 chr7 154997373 154997685 + 43 NA Intergenic Charlie1b|DNA|hAT-Charlie -91957 NM_198337 3638 Hs.520819 NM_005542 HPRD:03633 INSIG1 CL-6|CL6 insulin induced gene 1 protein-coding 0.025641 0.447284 -104(GCCACCATGTCC,+,0.00) 561_WT_peak_3793 chr19 45458665 45458896 + 43 NA intron (NM_001294, intron 1 of 13) CpG 299 NM_001294 1209 Hs.444441 NM_001294 ENSG00000104853 CLPTM1 - cleft lip and palate associated transmembrane protein 1 protein-coding 0.095238 0.745690 -132(GGCGGCCGGG,+,0.00),-100(GGAGGCCGAG,+,0.00) 46(CCCGGGAGGCCG,-,0.00),47(CCGGGAGGCCGG,-,0.00) -128(GCCGGGGG,+,0.00),-65(GCCGGGGG,+,0.00) -98(AGGCCGAGAGGG,-,0.00),-87(GGACTGAGGGGG,-,0.00) 561_WT_peak_5154 chr3 71493625 71493943 + 43 NA intron (NM_001012505, intron 3 of 6) intron (NM_001012505, intron 3 of 6) 97456 NR_031697 100302112 NR_031697 miRBase:MI0006431 MIR1284 MIRN1284|hsa-mir-1284 microRNA 1284 ncRNA 0.015723 0.498433 112(CGGCTTCTTCCC,-,0.00) 561_WT_peak_6281 chr6 31705889 31706004 + 43 NA promoter-TSS (NM_001287593).7 promoter-TSS (NM_001287593).7 -851 NM_001287593 1192 Hs.414565 NM_001288 HPRD:04188 CLIC1 G6|NCC27 chloride intracellular channel 1 protein-coding 0.017391 0.500000 -91(CCGACAGA,+,0.00) 561_WT_peak_7223 chr9 19230734 19230912 + 43 NA promoter-TSS (NM_017925) promoter-TSS (NM_017925) 60 NM_017925 55667 Hs.249591 NM_017925 HPRD:12927 DENND4C C9orf55|C9orf55B|bA513M16.3 DENN/MADD domain containing 4C protein-coding 0.101124 0.731844 -135(GAATCCGGTGCT,-,0.00) -113(AGGAAGAAGCCG,+,0.00) 2(AGGCTGGGAGGG,-,0.00) -15(GCGGGGCCTGCG,+,0.00) -103(CGTGTCGG,+,0.00) -61(GCTGCGGCGC,+,0.00),-4(GCTGCAAGGC,+,0.00) 561_WT_peak_2219 chr14 55196910 55197084 + 43 NA intron (NM_001161576, intron 2 of 10) intron (NM_001161576, intron 2 of 10) -24509 NM_001161577 23034 Hs.98259 NM_015589 HPRD:10209 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding 0.011494 0.440000 -70(GAAAGAGGAAGT,+,0.00) 561_WT_peak_1775 chr12 76414122 76414402 + 43 NA Intergenic Intergenic 11294 NM_007350 22822 Hs.602085 NM_007350 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology-like domain, family A, member 1 protein-coding 0.014286 0.501779 -74(GCAACAGGAAGT,+,0.00) 561_WT_peak_6052 chr5 180237325 180237512 + 43 NA promoter-TSS (NM_001114618) promoter-TSS (NM_001114618) -281 NM_001114617 4245 Hs.519818 NM_002406 HPRD:01189 MGAT1 GLCNAC-TI|GLCT1|GLYT1|GNT-1|GNT-I|MGAT mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase protein-coding 0.069519 0.648936 -82(GCCGGGCG,+,0.00) -8(GGTGGAGCCGCG,+,0.00) 561_WT_peak_6571 chr7 1980109 1980424 + 43 NA intron (NM_001013836, intron 16 of 18) intron (NM_001013836, intron 16 of 18) -96377 NR_039799 100616160 NR_039799 MIR4655 - microRNA 4655 ncRNA 0.060317 0.617089 90(GAAACACGAATC,+,0.00) 561_WT_peak_2415 chr15 31284114 31284307 + 43 NA promoter-TSS (NM_017762) promoter-TSS (NM_017762) -403 NM_017762 54893 Hs.30141 NM_017762 HPRD:07895 MTMR10 - myotubularin related protein 10 protein-coding 0.108808 0.731959 -11(TCGCCCTCCGGC,+,0.00) -20(GGGCCGACTT,+,0.00) -113(GGCCACGGCGGC,-,0.00) -148(CAGGCGGCCCGC,-,0.00),-125(GCGGCCTGCGGG,+,0.00),-4(CCGGCCTGGGCG,+,0.00) 561_WT_peak_2913 chr16 78068327 78068575 + 43 NA Intergenic Intergenic 5465 NM_001244755 10143 Hs.177936 NM_005752 HPRD:13072 CLEC3A CLECSF1 C-type lectin domain family 3, member A protein-coding 0.004032 0.485944 67(GGGCCGATTC,+,0.00) 561_WT_peak_1534 chr11 134123287 134123619 + 43 NA promoter-TSS (NM_014384) promoter-TSS (NM_014384) 19 NM_014384 27034 Hs.14791 NM_014384 HPRD:11985 ACAD8 ACAD-8|ARC42 acyl-CoA dehydrogenase family, member 8 protein-coding 0.102410 0.687688 -43(GTTGCCGGGTCG,-,0.00),99(GTCTCCGGGTCC,-,0.00) 80(CTCGGCTGCC,-,0.00) 85(CTGCCTGCCCGG,+,0.00) -163(GGCGCCGA,-,0.00) -33(CGCAGGTCCCGC,-,0.00) 26(CGCGGAGCTGCG,+,0.00) 46(GCTGTGGAGC,+,0.00) 561_WT_peak_3821 chr19 47734041 47734266 + 43 NA intron (NM_001127240, intron 1 of 3) CpG 298 NM_014417 27113 Hs.467020 NM_014417 HPRD:16165 BBC3 JFY-1|JFY1|PUMA BCL2 binding component 3 protein-coding 0.120000 0.761062 -55(TCGCCGCC,+,0.00) 43(GCGCGCCCGCCG,+,0.00) -142(GGCGCGGT,-,0.00) 23(GGGCGGCTTC,+,0.00) -68(CCGGCCTGGCCG,+,0.00) 561_WT_peak_4518 chr2 240210849 240211022 + 43 NA intron (NM_006037, intron 2 of 26) L1MEe|LINE|L1 -16222 NR_036229 100423043 NR_036229 miRBase:MI0015875 MIR4269 - microRNA 4269 ncRNA 0.005780 0.373563 561_WT_peak_5153 chr3 71493332 71493566 + 43 NA intron (NM_001012505, intron 3 of 6) intron (NM_001012505, intron 3 of 6) 97791 NR_031697 100302112 NR_031697 miRBase:MI0006431 MIR1284 MIRN1284|hsa-mir-1284 microRNA 1284 ncRNA 0.012821 0.493617 -75(TCCAGGCCCT,+,0.00) 53(CAAACCCG,+,0.00) 561_WT_peak_7101 chr8 103819122 103819310 + 43 NA Intergenic CpG 57181 NM_148174 51582 Hs.459106 NM_015878 HPRD:07443 AZIN1 OAZI|OAZIN|ODC1L antizyme inhibitor 1 protein-coding 0.138298 0.772487 -104(GGCAGCCGAG,+,0.00) -153(CCCGGGGGGCGG,-,0.00),-114(CCGGGCAGGCGG,-,0.00) -146(GGCGGGGG,+,0.00),-49(GGCGGGGG,+,0.00) -159(GCGCGGCCCGGG,+,0.00),-48(GCGGGGGCGGGG,+,0.00),-42(GCGGGGCGATCG,+,0.00) -157(GCGGCCCGGGGG,+,0.00) 561_WT_peak_812 chr1 236029871 236030082 + 43 NA intron (NM_001301365, intron 1 of 52) CpG 251 NM_000081 1130 Hs.532411 NM_000081 HPRD:06060 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding 0.118483 0.773585 -141(CGGCCCGGCGGC,+,0.00) -154(GAGCTCCCGCCC,+,0.00) -14(TCCCGGCCCT,+,0.00) -145(CCCGCGGC,-,0.00) -31(CGCCCTCAGCCC,+,0.00) 21(CCAAACCG,+,0.00) -143(CGCGGCCCGGCG,-,0.00),-117(CCCGGCGCCGCG,+,0.00),-117(CCCGGCGCCGCG,-,0.00) -124(AAGGCGGCCC,-,0.00) -142(GCGGCCCGGCGG,+,0.00),-121(GCGGCCCGGCGC,+,0.00) 561_WT_peak_7364 chr9 98912616 98912981 + 43 NA Intergenic MER20|DNA|hAT-Charlie -34105 NM_001256408 158434 Hs.381771 NM_001256408 LOC158434 - uncharacterized LOC158434 protein-coding 0.016438 0.489071 -128(AAACGGCT,+,0.00) -115(CAAAACCA,+,0.00) 561_WT_peak_1066 chr10 76970553 76970854 + 43 NA intron (NR_033675, intron 1 of 10) CpG 403 NR_033675 7417 Hs.355927 NM_003375 HPRD:01904 VDAC2 POR voltage-dependent anion channel 2 protein-coding 0.116279 0.741722 49(GGACTCGGAGTC,+,0.00) 24(GGCGGCCAAG,+,0.00) -77(AAGCGGCT,+,0.00),-76(AGCGGCTT,-,0.00) -104(GAGCTGCAGCCC,+,0.00) -94(CCGACCGC,+,0.00),2(CCGACCCA,+,0.00) 91(CCCGCGGC,-,0.00) 106(CCCTCTCTGCCC,+,0.00) 45(CGCCGGAC,+,0.00) -15(GCCGCGCC,+,0.00) 85(CGCTGCCCCGCG,-,0.00),93(CGCGGCCCCTCG,-,0.00) 18(GGCCGCGGCGGC,-,0.00) 25(GCGGCCAAGC,+,0.00),89(GCCCCGCGGC,-,0.00) 26(CGGCCAAGCCGG,-,0.00) 561_WT_peak_4474 chr2 219524199 219524450 + 43 NA promoter-TSS (NM_004328) promoter-TSS (NM_004328) 31 NR_073599 7701 Hs.657969 NM_005081 HPRD:04967 ZNF142 pHZ-49 zinc finger protein 142 protein-coding 0.059761 0.619048 -86(CCGCCCTCCACC,+,0.00) -133(TCTTGCCG,+,0.00) -91(TTTTCCCG,-,0.00) 60(GGCGCGGT,-,0.00) 561_WT_peak_5230 chr3 121865322 121865492 + 42 NA Intergenic Intergenic -37123 NM_000388 846 Hs.435615 NM_000388 HPRD:03122 CASR CAR|EIG8|FHH|FIH|GPRC2A|HHC|HHC1|HYPOC1|NSHPT|PCAR1 calcium-sensing receptor protein-coding 0.005882 0.409357 561_WT_peak_5229 chr3 121749492 121749547 + 42 NA Intergenic Intergenic -8392 NM_175924 286676 Hs.98484 NM_175924 HPRD:13735 ILDR1 DFNB42|ILDR1alpha|ILDR1alpha'|ILDR1beta immunoglobulin-like domain containing receptor 1 protein-coding 0.000000 0.428571 561_WT_peak_1657 chr12 42491983 42492196 + 42 NA intron (NM_001099650, intron 4 of 6) MIR|SINE|MIR 46584 NM_001099650 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding 0.018779 0.355140 561_WT_peak_1030 chr10 70848223 70848432 + 42 NA intron (NR_036430, intron 1 of 1) intron (NR_036430, intron 1 of 1) 499 NR_036430 5552 Hs.1908 NM_002727 HPRD:01513 SRGN PPG|PRG|PRG1 serglycin protein-coding 0.014354 0.423810 -30(AAGTGTCT,+,0.00) 561_WT_peak_5764 chr5 58395239 58395426 + 42 NA intron (NM_001104631, intron 5 of 14) intron (NM_001104631, intron 5 of 14) -59993 NM_001197222 5144 Hs.117545 NM_006203 HPRD:02530 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D, cAMP-specific protein-coding 0.016043 0.393617 561_WT_peak_6796 chr7 102985131 102985382 + 42 NA promoter-TSS (NM_014377) promoter-TSS (NM_014377) 64 NM_014377 27000 Hs.558476 NM_014377 ENSG00000105821 DNAJC2 MPHOSPH11|MPP11|ZRF1|ZUO1 DnaJ (Hsp40) homolog, subfamily C, member 2 protein-coding 0.063745 0.575397 -25(CCCCCGCC,-,0.00) -33(CCCTCCCACCCC,+,0.00) 561_WT_peak_680 chr1 202976470 202976728 + 42 NA promoter-TSS (NM_138391) promoter-TSS (NM_138391) 63 NM_001079809 653659 Hs.652908 NM_001079809 TMEM183B C1orf37-DUP transmembrane protein 183B protein-coding 0.127907 0.733591 65(CGAGGTGGGCGA,-,0.00) -120(AGCGGCCT,-,0.00),26(AAGCGACT,+,0.00) 48(ACGACGCC,+,0.00) -63(GGGCCGGCTCTC,-,0.00) 60(CCGGCCGA,+,0.00) -29(GCCCGGCCCG,+,0.00) -91(GCCGGGCG,+,0.00) -76(CTTGCGGCTCCC,-,0.00) -66(CCGGGGCCGGCT,+,0.00) -97(CGCGGAGCCGGG,+,0.00) -88(GGGCGGAGCT,+,0.00) -156(CGACTCGG,+,0.00) 5(GTCGCCATGCCC,+,0.00) -99(GCCGCGGAGC,+,0.00) 561_WT_peak_1353 chr11 65192333 65192353 + 42 NA non-coding (NR_028272, exon 1 of 1) non-coding (NR_028272, exon 1 of 1) 2074 NR_028272 283131 Hs.523789 NR_002802 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA 0.000000 0.666667 561_WT_peak_341 chr1 100816807 100817025 + 42 NA Intergenic Intergenic -1107 NM_003672 8556 Hs.127411 NM_003672 HPRD:04614 CDC14A cdc14|hCDC14 cell division cycle 14A protein-coding 0.059633 0.557078 -102(AAGCGACT,+,0.00) -21(TCGGTCTG,-,0.00) -69(TCTTGCTGTTTC,-,0.00) 561_WT_peak_1764 chr12 70636588 70636761 + 42 NA promoter-TSS (NM_001199302) promoter-TSS (NM_001199302) -100 NM_014515 4848 Hs.133350 NM_014515 HPRD:05367 CNOT2 CDC36|NOT2|NOT2H CCR4-NOT transcription complex, subunit 2 protein-coding 0.086705 0.649425 -110(AGTACGCG,-,0.00) -126(TGGTGCCG,+,0.00) -83(GGGAGCTGAGGG,+,0.00) -11(CGAGGCGG,+,0.00) 561_WT_peak_3775 chr19 41903557 41903621 + 42 NA promoter-TSS (NM_000709) promoter-TSS (NM_000709) -105 NM_000709 593 Hs.433307 NM_000709 HPRD:02009 BCKDHA BCKDE1A|MSU|MSUD1|OVD1A branched chain keto acid dehydrogenase E1, alpha polypeptide protein-coding 0.015625 0.353846 561_WT_peak_2719 chr16 20912094 20912337 + 42 NA promoter-TSS (NM_173475) promoter-TSS (NM_173475) 140 NM_001128302 57149 Hs.745012 NM_020424 HPRD:14254 LYRM1 A211C6.1 LYR motif containing 1 protein-coding 0.086420 0.713115 -28(GGCGCCGA,-,0.00) -146(TCGGTCGG,-,0.00) 22(CGGGCAGGGA,-,0.00) -96(GCCGCGGG,+,0.00) -108(TCCTCCCAGCCC,+,0.00) -87(TGCGCGCT,-,0.00) -121(TCCTGGCGCCGC,-,0.00) 561_WT_peak_3765 chr19 40324309 40324629 + 42 NA TTS (NM_001436) TTS (NM_001436) 404 NM_006483 9149 Hs.130988 NM_004714 HPRD:05188 DYRK1B AOMS3|MIRK dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B protein-coding 0.056250 0.654206 71(CCCCCCTCCTCT,+,0.00),118(GGAGCAGGGCGG,-,0.00) -89(GGCGACGA,-,0.00) -25(CCCTCCCAGCCT,+,0.00) 47(GGCAGGGCCCGC,-,0.00) -71(CGCGGAGCTGAG,+,0.00) -80(GAAGCGGCCC,-,0.00),124(GGGCGGATCC,+,0.00) 561_WT_peak_2748 chr16 27248648 27248842 + 42 NA intron (NM_145080, intron 2 of 7) intron (NM_145080, intron 2 of 7) -30781 NR_037184 400512 Hs.434412 NR_037184 ENSG00000245888 FLJ21408 - uncharacterized LOC400512 ncRNA 0.025773 0.584615 -139(AGCCACCT,-,0.00) 561_WT_peak_6079 chr6 2989014 2989273 + 42 NA non-coding (NR_026855, exon 2 of 2) non-coding (NR_026855, exon 2 of 2) 942 NR_026856 401232 Hs.720158 NM_207495 HPRD:16819 LINC01011 DKFZP686I15217 long intergenic non-protein coding RNA 1011 ncRNA 0.073359 0.696154 63(CTCGGCCGCC,-,0.00) -113(AAGCGGCT,+,0.00) 2(GGGATGAGGGGG,-,0.00) -116(CAAAAGCG,+,0.00) -53(TGCGCGGA,-,0.00),70(GCCGCCCA,+,0.00) -114(AAAGCGGCTC,-,0.00) 23(GCTGCGGGGG,+,0.00) 561_WT_peak_4857 chr22 24823620 24823852 + 42 NA intron (NR_103543, intron 1 of 1) intron (NR_103543, intron 1 of 1) 206 NM_000675 135 Hs.197029 NM_000675 HPRD:00043 ADORA2A A2aR|ADORA2|RDC8 adenosine A2a receptor protein-coding 0.034483 0.716738 -105(GGAGGAGGGCTG,-,0.00),-50(GGAGGAGGGGGT,-,0.00) -54(GCGGGGAGGAGG,-,0.00) 29(CACTGGCCCCGG,-,0.00) 561_WT_peak_2440 chr15 41522883 41523141 + 42 NA promoter-TSS (NM_007236) promoter-TSS (NM_007236) -57 NM_152596 161829 Hs.307999 NM_152596 HPRD:14571 EXD1 EXDL1 exonuclease 3'-5' domain containing 1 protein-coding 0.112403 0.679537 -28(GGAGGAGGACGG,-,0.00) -153(GCGACGCC,+,0.00),-126(GCGACGCC,+,0.00) -118(CGCCCGGC,-,0.00) -122(CGCCCGCCCGGC,-,0.00) -68(CGCGGCCCCGAG,-,0.00) -70(CACGCGGCCC,-,0.00) -155(CCGCGACG,-,0.00) -52(GCTCCCCAGC,-,0.00) 561_WT_peak_3267 chr17 56421757 56422081 + 42 NA TTS (NM_003168) TTS (NM_003168) 7356 NR_038417 100506779 Hs.718477 NR_038410 ENSG00000265148 BZRAP1-AS1 - BZRAP1 antisense RNA 1 ncRNA 0.012346 0.541538 -100(GGGCCCAGTT,+,0.00) 561_WT_peak_488 chr1 149577113 149577283 + 42 NA intron (NR_111955, intron 1 of 1) CpG 731 NR_024511 728855 Hs.456578 NR_024510 ENSG00000235398 LINC00623 CH17-118O6.2 long intergenic non-protein coding RNA 623 ncRNA 0.100000 0.713450 -137(GGCGCCGA,-,0.00) -142(CGCCCGGC,-,0.00) -92(CCTTCGGCTCCA,-,0.00) 561_WT_peak_232 chr1 52195014 52195230 + 42 NA promoter-TSS (NM_148907) promoter-TSS (NM_148907) -364 NM_148904 114883 Hs.21938 NM_024586 HPRD:09479 OSBPL9 ORP-9|ORP9 oxysterol binding protein-like 9 protein-coding 0.092593 0.695853 -94(AGCCGCTA,-,0.00) 43(CCCCCGCC,-,0.00) -12(GCAGCGCCGGCG,+,0.00),-8(CGCCGGCGCCGC,-,0.00) 561_WT_peak_3775-2 chr19 41903676 41903857 + 42 NA promoter-TSS (NM_000709) promoter-TSS (NM_000709) 72 NM_001164783 593 Hs.433307 NM_000709 HPRD:02009 BCKDHA BCKDE1A|MSU|MSUD1|OVD1A branched chain keto acid dehydrogenase E1, alpha polypeptide protein-coding 0.066298 0.653846 -77(TGGCGGCT,+,0.00) -71(CTAAACCG,+,0.00) -74(CGGCTAAA,+,0.00) -57(GAGCCAGGCTGC,-,0.00) 561_WT_peak_6717 chr7 74306914 74307138 + 42 NA promoter-TSS (NR_040584) promoter-TSS (NR_040584) 139 NR_027776 5383 Hs.292996 NM_174930 HPRD:17867 PMS2P5 PMS2L5|PMS7 postmeiotic segregation increased 2 pseudogene 5 pseudo 0.093750 0.680000 11(AGCGGCAT,-,0.00) -105(GGGCTCGCGGTC,-,0.00) -148(CGGTGTTG,-,0.00) -159(CGAGGCGG,+,0.00) 561_WT_peak_5674 chr5 16466081 16466271 + 42 NA promoter-TSS (NM_033414) promoter-TSS (NM_033414) -282 NM_033414 90441 Hs.60300 NM_033414 HPRD:12278 ZNF622 ZPR9 zinc finger protein 622 protein-coding 0.105263 0.680628 -76(GGCGCCCGAG,+,0.00) -133(TTGTGCCG,+,0.00) -20(CAGCGACG,-,0.00) 561_WT_peak_4341 chr2 158274849 158275021 + 42 NA intron (NM_004288, intron 7 of 7) intron (NM_004288, intron 7 of 7) 25669 NM_004288 9595 Hs.270 NM_004288 HPRD:09192 CYTIP B3-1|CASP|CYBR|CYTHIP|HE|PSCDBP cytohesin 1 interacting protein protein-coding 0.000000 0.393064 -155(TACCCCTCCTCC,+,0.00) 561_WT_peak_6588 chr7 7606579 7606787 + 42 NA promoter-TSS (NM_019005) promoter-TSS (NM_019005) 67 NM_019005 54468 Hs.520215 NM_019005 HPRD:07898 MIOS - missing oocyte, meiosis regulator, homolog (Drosophila) protein-coding 0.158654 0.760766 -134(CGCGGCCGCC,-,0.00),-61(GGCGGCCGCG,+,0.00) -73(AAGCGGCT,+,0.00) -116(CGCGTCCG,+,0.00) -60(GCGGCCGCGCTG,+,0.00) 561_WT_peak_1055 chr10 75608952 75609129 + 42 NA exon (NM_001204492, exon 6 of 21) exon (NM_001204492, exon 6 of 21) 25309 NM_001222 818 Hs.523045 NM_001222 HPRD:03672 CAMK2G CAMK|CAMK-II|CAMKG calcium/calmodulin-dependent protein kinase II gamma protein-coding 0.022599 0.516854 -98(CCTTCAGGTCCC,-,0.00) 561_WT_peak_1718 chr12 55329411 55329455 + 42 NA Intergenic MSTB1|LTR|ERVL-MaLR 38083 NM_014796 9840 Hs.33187 NM_014796 ENSG00000135426 TESPA1 KIAA0748 thymocyte expressed, positive selection associated 1 protein-coding 0.000000 0.533333 561_WT_peak_304 chr1 86861641 86861914 + 42 NA 5' UTR (NM_020729, exon 1 of 18) 5' UTR (NM_020729, exon 1 of 18) 248 NM_001007022 57489 Hs.149360 NM_020729 HPRD:11134 ODF2L dJ977L11.1 outer dense fiber of sperm tails 2-like protein-coding 0.098901 0.638686 -88(CCCCCGCC,-,0.00) -63(TCGTGACG,+,0.00) -49(CGCCGTCGCCGC,-,0.00) -17(GGCGCCACGGCT,+,0.00) 561_WT_peak_5768 chr5 61602955 61603143 + 42 NA intron (NM_001243953, intron 1 of 19) intron (NM_001243953, intron 1 of 19) 1060 NM_004520 3796 Hs.558351 NM_004520 KIF2A CDCBM3|HK2|KIF2 kinesin heavy chain member 2A protein-coding 0.031915 0.502646 561_WT_peak_745 chr1 224370593 224370819 + 42 NA promoter-TSS (NM_003676) promoter-TSS (NM_003676) -204 NM_003676 8560 Hs.299878 NM_003676 HPRD:13133 DEGS1 DEGS|DEGS-1|DES1|Des-1|FADS7|MLD delta(4)-desaturase, sphingolipid 1 protein-coding 0.101770 0.656388 0(GGTGGCCGAG,+,0.00) -34(GGGCGGGCACTC,-,0.00),46(GAGAGCCGGCCC,+,0.00) -36(AGGGGCGGGC,-,0.00) -79(CCTTCCTTTTTC,-,0.00) 49(AGCCGGCCCCGC,-,0.00) 561_WT_peak_7411 chr9 123555564 123555903 + 42 NA promoter-TSS (NM_012164) promoter-TSS (NM_012164) 7 NM_012164 26190 Hs.494985 NM_012164 HPRD:09950 FBXW2 FBW2|Fwd2|Md6 F-box and WD repeat domain containing 2 protein-coding 0.117994 0.720588 -79(GCTCCCGGTCCG,-,0.00),-49(GCTTCCGGTGCT,-,0.00) -53(AGCGGCTT,-,0.00),9(AAGCGGCT,+,0.00) -123(CCGACCGG,+,0.00) -149(GCCGCGGG,+,0.00) 105(GCGTGCCG,+,0.00),164(TCGTACCG,+,0.00) -84(CCGCTGCTCCCG,-,0.00),3(CGGCGGAAGCGG,+,0.00),63(CGGGAGTAGGGG,+,0.00) -155(AGCAGAGCCGCG,+,0.00),-14(CTCAGCTCCGCG,-,0.00),-6(CGCGGCTCCCGG,-,0.00) -113(CCGCCTCG,-,0.00) -73(GGTCCGCAGC,-,0.00),-10(GCTCCGCGGC,-,0.00) 561_WT_peak_3783 chr19 42829395 42829581 + 42 NA promoter-TSS (NM_001410) promoter-TSS (NM_001410) -273 NM_001410 1954 Hs.132483 NM_001410 HPRD:10370 MEGF8 C19orf49|CRPT2|EGFL4|SBP1 multiple EGF-like-domains 8 protein-coding 0.037634 0.550802 -39(ACTGCGCA,+,0.00),1(GCTGCGCA,+,0.00) 561_WT_peak_1400 chr11 69489920 69490125 + 42 NA 5' UTR (NM_153451, exon 1 of 5) 5' UTR (NM_153451, exon 1 of 5) 143 NM_153451 220064 Hs.667996 NM_153451 HPRD:06245 ORAOV1 TAOS1 oral cancer overexpressed 1 protein-coding 0.078049 0.665049 -19(AGACCCGGCAGC,+,0.00) -106(GGCATCGA,-,0.00) -149(GCGGGCCCGGCC,+,0.00) -82(AGCCATAGCGGC,-,0.00) 561_WT_peak_4697 chr20 54967702 54967886 + 41 NA promoter-TSS (NM_198436) promoter-TSS (NM_198436) 87 NM_001033522 1477 Hs.172865 NM_001324 HPRD:02653 CSTF1 CstF-50|CstFp50 cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa protein-coding 0.059783 0.578378 -68(GCGGTCGG,-,0.00) 561_WT_peak_5591 chr4 128886026 128886320 + 41 NA promoter-TSS (NM_001039717) promoter-TSS (NM_001039717) -288 NM_001039717 80167 Hs.445817 NM_025097 HPRD:07953 C4orf29 - chromosome 4 open reading frame 29 protein-coding 0.078231 0.640678 115(AGGCGTCT,+,0.00) 79(TCGTTCCG,+,0.00) -91(CCACCGGCTCCC,-,0.00) 561_WT_peak_1861 chr12 112432493 112432734 + 41 NA intron (NR_122119, intron 2 of 8) MER11D|LTR|ERVK 18410 NM_001294314 89894 Hs.506815 NM_138341 HPRD:11275 TMEM116 - transmembrane protein 116 protein-coding 0.016598 0.400826 -76(GAAACAGGATGT,+,0.00) 561_WT_peak_4969 chr22 50247013 50247202 + 41 NA promoter-TSS (NM_014838) promoter-TSS (NM_014838) -390 NM_014838 9889 Hs.475208 NM_014838 HPRD:11692 ZBED4 - zinc finger, BED-type containing 4 protein-coding 0.132275 0.742105 -126(AGCGGCCT,-,0.00) -6(CGGGACGA,-,0.00) 12(CCCGCGCCCCGC,-,0.00) -34(CGCCGAGCCGCT,+,0.00) 561_WT_peak_701 chr1 206541448 206541666 + 41 NA intron (NM_001170637, intron 1 of 19) intron (NM_001170637, intron 1 of 19) -15810 NR_120535 100996712 Hs.497575 NM_001271887 SRGAP2D - SLIT-ROBO Rho GTPase activating protein 2D (pseudogene) pseudo 0.004587 0.383562 561_WT_peak_1981 chr13 31314279 31314464 + 41 NA intron (NM_001204406, intron 2 of 5) L3b|LINE|CR1 4726 NM_001629 241 Hs.507658 NM_001629 HPRD:04742 ALOX5AP FLAP arachidonate 5-lipoxygenase-activating protein protein-coding 0.021622 0.381720 -135(GGCATCGA,-,0.00) 561_WT_peak_756 chr1 226496613 226496848 + 41 NA intron (NM_001270410, intron 1 of 14) CpG 474 NM_001270409 286826 Hs.120817 NM_173083 HPRD:13990 LIN9 BARA|BARPsv|Lin-9|TGS|TGS1|TGS2 lin-9 DREAM MuvB core complex component protein-coding 0.076596 0.656780 -134(GGCGGCGA,-,0.00) -83(GGGCTGGCAGTC,-,0.00) -118(CAACACCG,+,0.00) -3(CGGGAAAA,+,0.00) -129(CGACGCGG,+,0.00) -133(GCGGCGACGC,+,0.00) 561_WT_peak_1602 chr12 12532947 12532998 + 41 NA intron (NM_001300742, intron 2 of 3) Tigger1|DNA|TcMar-Tigger 22959 NM_058169 118426 Hs.720779 NM_058169 HPRD:17439 LOH12CR1 LOH1CR12 loss of heterozygosity, 12, chromosomal region 1 protein-coding 0.019608 0.519231 -128(GCCGGGGG,+,0.00) 561_WT_peak_6276 chr6 31543228 31543540 + 41 NA promoter-TSS (NM_000594).3 promoter-TSS (NM_000594).3 40 NM_000594 7124 Hs.241570 NM_000594 HPRD:01855 TNF DIF|TNF-alpha|TNFA|TNFSF2 tumor necrosis factor protein-coding 0.019231 0.562300 -104(CCGCCCTCCTCT,+,0.00) -107(TCCCCGCCCT,+,0.00) 102(CCCTCTCTCCCC,+,0.00) -109(TTTCCCCG,-,0.00) 55(GCTGCCAGGC,+,0.00) 561_WT_peak_1784 chr12 88693548 88693807 + 41 NA Intergenic Intergenic 157604 NM_181783 160418 Hs.331268 NM_181783 HPRD:10243 TMTC3 SMILE transmembrane and tetratricopeptide repeat containing 3 protein-coding 0.007722 0.446154 561_WT_peak_7500 chrX 9971912 9972188 + 41 NA Intergenic Intergenic -11745 NM_015691 55841 Hs.527524 NM_015691 HPRD:11136 WWC3 BM042 WWC family member 3 protein-coding 0.003623 0.389892 -11(CAAAAACG,+,0.00) 561_WT_peak_6164 chr6 26284712 26284882 + 41 NA TTS (NM_003543) TTS (NM_003543) 930 NM_003543 8365 Hs.591790 NM_003543 HPRD:11919 HIST1H4H H4/h|H4FH histone cluster 1, H4h protein-coding 0.035294 0.403509 -19(CGCGCACG,+,0.00) -21(AGCGCGCA,+,0.00) 561_WT_peak_646 chr1 183440172 183440389 + 41 NA non-coding (NR_040063, exon 1 of 5) non-coding (NR_040063, exon 1 of 5) 837 NR_040063 284649 Hs.127384 NR_040063 ENSG00000232860 SMG7-AS1 DKFZP564C196 SMG7 antisense RNA 1 ncRNA 0.041475 0.568807 561_WT_peak_2381 chr14 103058427 103058830 + 41 NA promoter-TSS (NM_015156) promoter-TSS (NM_015156) -368 NM_015156 23186 Hs.510521 NM_015156 HPRD:09645 RCOR1 COREST|RCOR REST corepressor 1 protein-coding 0.121588 0.698020 47(CGGGGAGGGCCG,-,0.00),199(CCGCCGCCCCGG,+,0.00) -103(GGCCGGGCGCTC,-,0.00) 2(CGTGCGCG,-,0.00),123(CACGTACG,+,0.00) -102(GCCGGGCG,+,0.00),191(CCCCCGCC,-,0.00) 44(GGGCGGGGAGGG,-,0.00) -126(TCCGCGCA,+,0.00),4(TGCGCGGG,-,0.00) -21(GGGGGGCCAGAG,+,0.00),191(CCCCCGCCCCGC,-,0.00) 169(CCCGGAGCCGCC,+,0.00) -95(GCTCCGCGGC,-,0.00),-87(GCTTCCCAGC,-,0.00),188(GCTCCCCCGC,-,0.00),196(GCCCCGCCGC,-,0.00) 561_WT_peak_538 chr1 154155470 154155723 + 41 NA non-coding (NR_103461, exon 1 of 8) non-coding (NR_103461, exon 1 of 8) 129 NM_153649 7170 Hs.535581 NM_152263 HPRD:01840 TPM3 CAPM1|CFTD|HEL-189|HEL-S-82p|NEM1|OK/SW-cl.5|TM-5|TM3|TM30|TM30nm|TM5|TPMsk3|TRK|hscp30 tropomyosin 3 protein-coding 0.075099 0.641732 -5(CCTGCCTCCTCC,+,0.00) -66(CCGCCTCG,-,0.00) 561_WT_peak_6012 chr5 169705779 169705962 + 41 NA intron (NM_005565, intron 3 of 20) intron (NM_005565, intron 3 of 20) 18952 NM_005565 3937 Hs.304475 NM_005565 LCP2 SLP-76|SLP76 lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa) protein-coding 0.010929 0.592391 -119(GAGCTGAGTGGG,-,0.00) 561_WT_peak_6383 chr6 86352406 86352643 + 41 NA promoter-TSS (NM_001253771) promoter-TSS (NM_001253771) 84 NM_001159674 10492 Hs.571177 NM_006372 HPRD:06734 SYNCRIP GRY-RBP|GRYRBP|HNRNPQ|HNRPQ1|NSAP1|PP68|hnRNP-Q synaptotagmin binding, cytoplasmic RNA interacting protein protein-coding 0.080169 0.613445 -126(CCACCCTCCCCC,+,0.00) 51(GGCGGCCGAA,+,0.00) -144(AGCCGGTT,-,0.00) 25(CGGCGCGA,-,0.00) -46(GGGCTGAGGCGG,-,0.00) -25(GTCCGATG,-,0.00),22(GTCCGGCG,-,0.00) -136(TCTACCCG,-,0.00) 13(GCTCCCTGTGTC,-,0.00) 561_WT_peak_5149 chr3 69248549 69248698 + 41 NA intron (NM_015123, intron 11 of 22) intron (NM_015123, intron 11 of 22) -76877 NM_198271 56203 Hs.350621 NM_198271 HPRD:13993 LMOD3 - leiomodin 3 (fetal) protein-coding 0.006711 0.353333 561_WT_peak_656 chr1 185285938 185286267 + 41 NA 5' UTR (NM_006469, exon 1 of 15) 5' UTR (NM_006469, exon 1 of 15) 359 NM_006469 10625 Hs.497183 NM_006469 HPRD:10004 IVNS1ABP FLARA3|HSPC068|KLHL39|ND1|NS-1|NS1-BP|NS1BP influenza virus NS1A binding protein protein-coding 0.094225 0.621212 38(AGGAGGAAGCGG,+,0.00) -65(GCCGCGCC,+,0.00) 54(GAATCGGCCC,-,0.00) -79(CTTCTCGG,+,0.00) 561_WT_peak_4175 chr2 86263195 86263385 + 41 NA intron (NM_015425, intron 27 of 33) intron (NM_015425, intron 27 of 33) -12299 NR_026984 90784 Hs.594051 NR_026984 LOC90784 - uncharacterized LOC90784 ncRNA 0.031579 0.534031 4(GGGACCGGAGGC,+,0.00) -141(GTCCCACG,-,0.00) 561_WT_peak_4465 chr2 215674033 215674248 + 41 NA promoter-TSS (NR_110292) promoter-TSS (NR_110292) 295 NR_104215 580 Hs.591642 NM_000465 HPRD:03354 BARD1 - BRCA1 associated RING domain 1 protein-coding 0.120930 0.657407 -33(GGCGGTCGAG,+,0.00) 39(GCTCGTTCCCGG,+,0.00) -21(CGGCGCGA,-,0.00),30(CGGAACGA,-,0.00) -96(CCCTCGCAGCCA,+,0.00) -163(GGGAACGGAAGG,+,0.00) 16(TTCCATGGCGGG,-,0.00) -96(CCCTCGCAGC,-,0.00) 561_WT_peak_532 chr1 153508104 153508405 + 41 NA intron (NM_014624, intron 1 of 2) intron (NM_014624, intron 1 of 2) 463 NM_014624 6277 Hs.275243 NM_014624 HPRD:00237 S100A6 2A9|5B10|CABP|CACY|PRA S100 calcium binding protein A6 protein-coding 0.019934 0.632450 -58(CCTTCCGCACCC,-,0.00) 32(GCGGGGGAGC,+,0.00) 561_WT_peak_6682 chr7 64023121 64023331 + 41 NA intron (NM_001130022, intron 1 of 3) intron (NM_001130022, intron 1 of 3) 279 NM_001130022 340252 Hs.520886 NM_178558 HPRD:08296 ZNF680 - zinc finger protein 680 protein-coding 0.057143 0.644550 -151(AGCCGCCA,-,0.00),-47(AGCCACTT,-,0.00) -39(CCGACCGG,+,0.00) -97(TCGGGCCG,+,0.00) -1(TGTCGGAC,+,0.00) -100(AACTCGGGCC,-,0.00) -157(CAGCCCAGCCGC,-,0.00) 561_WT_peak_1068 chr10 79789283 79789614 + 41 NA promoter-TSS (NM_007055) promoter-TSS (NM_007055) -150 NM_007055 11128 Hs.436896 NM_007055 HPRD:17879 POLR3A ADDH|HLD7|RPC1|RPC155|hRPC155 polymerase (RNA) III (DNA directed) polypeptide A, 155kDa protein-coding 0.054381 0.475904 -94(AGAGACTT,-,0.00) -148(GTCCCACG,-,0.00) -55(TTTCCCCG,-,0.00) -135(GCTTCCTCTTCC,-,0.00) 561_WT_peak_6769 chr7 99647283 99647539 + 41 NA promoter-TSS (NM_145914) promoter-TSS (NM_145914) -6 NM_145914 7589 Hs.632294 NM_145914 HPRD:03162 ZSCAN21 NY-REN-21|ZNF38|Zipro1 zinc finger and SCAN domain containing 21 protein-coding 0.089844 0.661479 -73(CCGCGGGGGCGG,-,0.00) -28(GGTACGCG,-,0.00) 39(TAGCGAGG,-,0.00) -41(TGCGCGGT,-,0.00) -71(GCGGGGGCGGGG,+,0.00) -67(GGGCGGGGCT,+,0.00) 42(CGAGGCGG,+,0.00) 561_WT_peak_2431 chr15 38988591 38988762 + 41 NA promoter-TSS (NM_207444) promoter-TSS (NM_207444) -123 NM_207444 400359 Hs.448785 NM_207444 HPRD:13418 C15orf53 - chromosome 15 open reading frame 53 protein-coding 0.005848 0.563953 561_WT_peak_6560 chr6 170921420 170921644 + 41 NA Intergenic CpG -27752 NM_001199461 5134 Hs.367900 NM_002598 HPRD:02922 PDCD2 RP8|ZMYND7 programmed cell death 2 protein-coding 0.147321 0.768889 -96(TCGACGCG,+,0.00) -92(CGCGAACG,+,0.00),-90(CGAACGCG,-,0.00) -142(TCCCGGCCCC,+,0.00) -85(GCGGAGCCCGAG,+,0.00) 48(CCGACTCG,-,0.00),49(CGACTCGG,+,0.00) 561_WT_peak_3645 chr19 13858894 13859086 + 41 NA intron (NM_030818, intron 1 of 9) intron (NM_030818, intron 1 of 9) 237 NM_030818 81576 Hs.24998 NM_030818 HPRD:11304 CCDC130 - coiled-coil domain containing 130 protein-coding 0.031250 0.559585 -27(CGGGAAAA,+,0.00) 561_WT_peak_3749 chr19 37958166 37958482 + 41 NA promoter-TSS (NM_152484) promoter-TSS (NM_152484) 15 NM_152484 148266 Hs.511848 NM_152484 HPRD:15849 ZNF569 ZAP1|ZNF zinc finger protein 569 protein-coding 0.072785 0.605678 -67(AGCGGCCT,-,0.00),34(AGAGGCCT,-,0.00) 96(CGGCTGGAGCTG,-,0.00) -2(TCGTTCCG,+,0.00) 3(CCGCTGCTTCCT,-,0.00) -79(AGGTTTTG,-,0.00) -101(TCCGCGCA,+,0.00) -107(CACAGCTCCGCG,-,0.00) 40(CTTCGCGG,+,0.00) 561_WT_peak_1655 chr12 40013863 40014036 + 41 NA promoter-TSS (NM_005164) promoter-TSS (NM_005164) -106 NM_005164 225 Hs.117852 NM_005164 ABCD2 ABC39|ALDL1|ALDR|ALDRP|hALDR ATP-binding cassette, sub-family D (ALD), member 2 protein-coding 0.028902 0.419540 -62(CAAAACCG,+,0.00) -60(AAACCGGCCC,-,0.00) 561_WT_peak_4091 chr2 62081945 62082201 + 41 NA promoter-TSS (NM_001201543) promoter-TSS (NM_001201543) -795 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 family with sequence similarity 161, member A protein-coding 0.046875 0.583658 36(TTGCCCTCCTCC,+,0.00) 43(CCTCCTGCTCCC,-,0.00) 49(GCTCCCCAGC,-,0.00) 561_WT_peak_4137 chr2 70520541 70520868 + 41 NA intron (NM_003096, intron 1 of 3) CpG 165 NM_003096 6637 Hs.465167 NM_003096 HPRD:04646 SNRPG SMG|Sm-G small nuclear ribonucleoprotein polypeptide G protein-coding 0.097859 0.600610 -75(CGGACCGGAAGA,+,0.00),145(AGGCCCGGCGTC,+,0.00) -51(AAGCGGCT,+,0.00) -93(CCGGGATCCCGG,+,0.00),-93(CCGGGATCCCGG,-,0.00) -78(CCTCGGAC,+,0.00) 20(CGGTTTGG,-,0.00) -128(TGCGCGGG,-,0.00),-108(TGCGCGGG,-,0.00) 561_WT_peak_422 chr1 143743079 143743106 + 41 NA intron (NR_027468, intron 1 of 4) intron (NR_027468, intron 1 of 4) 1427 NR_104014 388685 Hs.713362 NM_207400 LINC01138 LINC00875 long intergenic non-protein coding RNA 1138 ncRNA 0.074074 0.500000 -149(CGTGGGAC,+,0.00) -155(TAAAACCG,+,0.00) 561_WT_peak_6812 chr7 106808722 106808908 + 41 NA promoter-TSS (NM_001244262) promoter-TSS (NM_001244262) -591 NM_001244262 26959 Hs.162032 NM_012257 HPRD:13634 HBP1 - HMG-box transcription factor 1 protein-coding 0.043011 0.582888 -143(TCGACCCC,+,0.00) -134(TCGTGCCT,+,0.00) -98(CCTCGCTA,+,0.00) 561_WT_peak_2708 chr16 15737296 15737405 + 41 NA promoter-TSS (NM_001184999) promoter-TSS (NM_001184999) 199 NR_030159 619553 NR_030159 miRBase:MI0002468 MIR484 MIRN484|hsa-mir-484 microRNA 484 ncRNA 0.055046 0.481818 -152(TCGTGACG,+,0.00) 561_WT_peak_7240 chr9 33001251 33001486 + 41 NA non-coding (NR_036579, exon 1 of 8) non-coding (NR_036579, exon 1 of 8) 206 NR_036579 54840 Hs.20158 NM_017692 HPRD:05892 APTX AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT aprataxin protein-coding 0.063830 0.555085 -159(CTGGGCCGCC,-,0.00) 561_WT_peak_3133 chr17 34207479 34207651 + 41 NA promoter-TSS (NM_002985) promoter-TSS (NM_002985) -188 NM_002985 6352 Hs.514821 NM_002985 HPRD:01751 CCL5 D17S136E|RANTES|SCYA5|SIS-delta|SISd|TCP228|eoCP chemokine (C-C motif) ligand 5 protein-coding 0.017442 0.462428 561_WT_peak_6474 chr6 133135004 133135193 + 41 NA promoter-TSS (NM_001016) promoter-TSS (NM_001016) -610 NM_001016 6206 Hs.546289 NM_001016 RPS12 S12 ribosomal protein S12 protein-coding 0.052910 0.557895 -38(GGGAGCCGGAGG,+,0.00) -44(GAAACCGGGAGC,+,0.00) -76(CTACTCGG,+,0.00) 561_WT_peak_3788 chr19 44269640 44269832 + 41 NA TTS (NM_002250) TTS (NM_002250) -10594 NM_019108 56006 Hs.466875 NM_019108 HPRD:07800 SMG9 C19orf61|F17127_1 SMG9 nonsense mediated mRNA decay factor protein-coding 0.020833 0.585492 -26(AAGTGCCAGCCC,+,0.00) -142(GAGGCCTGGCTC,+,0.00) 561_WT_peak_3858 chr19 50094216 50094401 + 41 NA promoter-TSS (NM_020719) promoter-TSS (NM_020719) -604 NM_020719 57479 Hs.590971 NM_020719 ENSG00000126464 PRR12 KIAA1205 proline rich 12 protein-coding 0.059459 0.473118 6(GGGAGGAAGCGG,+,0.00) 561_WT_peak_7174 chr8 142413935 142414306 + 41 NA Intergenic MER6|DNA|TcMar-Tigger -17368 NM_007079 11156 Hs.43666 NM_007079 PTP4A3 PRL-3|PRL-R|PRL3 protein tyrosine phosphatase type IVA, member 3 protein-coding 0.035040 0.543011 59(CCCACTCAGCCA,+,0.00) -138(CGTCTGAC,+,0.00) 122(GGGAGCCGGAGG,+,0.00) -160(GCTTCCTGTATT,-,0.00) 72(GGCCACGGCGAC,-,0.00) 561_WT_peak_4617 chr20 34542421 34542806 + 41 NA promoter-TSS (NM_033630) promoter-TSS (NM_033630) -65 NM_033630 51282 Hs.584909 NM_016558 SCAND1 RAZ1|SDP1 SCAN domain containing 1 protein-coding 0.109091 0.670984 -134(AAGCCGCT,+,0.00),-133(AGCCGCTT,-,0.00),-80(AGGCGGCT,+,0.00) -58(GCGGGAGGGCGA,-,0.00) 203(CGCCCGGC,-,0.00) 561_WT_peak_6620 chr7 25019999 25020276 + 41 NA promoter-TSS (NM_015550) promoter-TSS (NM_015550) -306 NM_015550 26031 Hs.520259 NM_015550 HPRD:09474 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding 0.075812 0.658273 -125(GGCGGAGGGAGG,-,0.00) -21(TTTTCCGGGCCA,-,0.00) -28(TAGTGGCT,+,0.00) -11(CAGGGAAGGAGG,-,0.00) -135(GGGTTGGGAGGG,-,0.00) -80(CGGTGGCCCAGC,-,0.00) -105(GCGGCGAGGC,+,0.00) 561_WT_peak_1497 chr11 117922305 117922513 + 41 NA intron (NR_038318, intron 2 of 3) intron (NR_038318, intron 2 of 3) -25318 NM_019894 56649 Hs.161985 NM_019894 TMPRSS4 CAPH2|MT-SP2|TMPRSS3 transmembrane protease, serine 4 protein-coding 0.009615 0.535885 561_WT_peak_1865 chr12 112847248 112847439 + 41 NA promoter-TSS (NM_000970) promoter-TSS (NM_000970) 100 NM_001024662 6128 Hs.546283 NM_000970 HPRD:04745 RPL6 L6|SHUJUN-2|TAXREB107|TXREB1 ribosomal protein L6 protein-coding 0.047120 0.536458 -158(AAGCGTCT,+,0.00),-147(AGGCCTCT,+,0.00) -108(GGTGTCGA,-,0.00) -122(GTCCGACC,-,0.00) 561_WT_peak_2341 chr14 93241720 93241907 + 41 NA Intergenic Intergenic -18763 NM_005113 9950 Hs.104320 NM_005113 HPRD:06079 GOLGA5 GOLIM5|RFG5|ret-II golgin A5 protein-coding 0.010695 0.462766 561_WT_peak_2792 chr16 31084961 31085389 + 41 NA promoter-TSS (NM_001172668) promoter-TSS (NM_001172668) -352 NM_001172668 79759 Hs.102928 NM_024706 HPRD:07828 ZNF668 - zinc finger protein 668 protein-coding 0.065421 0.601399 51(GGCGGCAGAG,+,0.00) -120(GGCGTCGG,-,0.00),-114(GGCGTCGG,-,0.00) -69(GGGCCGGCGCTA,-,0.00) -97(CCGACGGA,+,0.00) -65(CGGCGCTA,+,0.00) 217(CAAAACCT,+,0.00) -24(GGCGCGGC,-,0.00) -23(GCGCGGCGAGCG,+,0.00) 45(GCCTATGGCGGC,-,0.00) 561_WT_peak_1807 chr12 94853345 94853715 + 41 NA promoter-TSS (NR_027035) promoter-TSS (NR_027035) 234 NM_016122 51134 Hs.279209 NM_016122 HPRD:14869 CEP83 CCDC41|NPHP18|NY-REN-58 centrosomal protein 83kDa protein-coding 0.094595 0.671159 114(TGGACCGGGATC,+,0.00) 170(AGCCGCCT,-,0.00) 136(CGGCGCCACCCC,+,0.00) -59(CGCTTACG,+,0.00) 31(TCCCGTCCCT,+,0.00) 34(CGTCCCTA,+,0.00) 68(GTCCGAGG,-,0.00) 23(CCTCGGGCTCCC,-,0.00) 76(GCGGCGGCGGCG,+,0.00),79(GCGGCGGCGGCG,+,0.00) 561_WT_peak_6129 chr6 25056466 25056636 + 41 NA Intergenic Intergenic -14155 NM_001286446 9750 Hs.559459 NM_014722 HPRD:12881 FAM65B C6orf32|DIFF40|DIFF48|MYONAP|PL48 family with sequence similarity 65, member B protein-coding 0.011765 0.514620 561_WT_peak_5414 chr4 10020624 10020807 + 41 NA intron (NM_001001290, intron 2 of 12) CpG-19663 2399 NM_020041 56606 Hs.656895 NM_020041 HPRD:05848 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 (facilitated glucose transporter), member 9 protein-coding 0.081967 0.673913 -127(CCGCGAGGGAGG,-,0.00) -142(AGGAGCCGAAGG,+,0.00) -51(GCGCAGCCAGGG,+,0.00) -49(GCAGCCAGGGCC,+,0.00) 561_WT_peak_5898 chr5 131355582 131355696 + 41 NA Intergenic Intergenic -7878 NM_001205250 23305 Hs.14945 NM_015256 HPRD:09190 ACSL6 ACS2|FACL6|LACS 6|LACS2|LACS5 acyl-CoA synthetase long-chain family member 6 protein-coding 0.000000 0.408696 561_WT_peak_6932 chr8 17780060 17780240 + 41 NA promoter-TSS (NM_006197) promoter-TSS (NM_006197) -216 NM_006197 5108 Hs.491148 NM_006197 HPRD:02624 PCM1 PTC4 pericentriolar material 1 protein-coding 0.094444 0.651934 -49(AGCGCCGGAAGC,+,0.00) -137(GAAAACCG,+,0.00) 561_WT_peak_3373 chr17 78228655 78228858 + 41 NA Intergenic L1M5|LINE|L1 -5904 NM_001256071 57674 Hs.195642 NM_020914 HPRD:10716 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding 0.014778 0.455882 -57(CTTCTCGG,+,0.00) 561_WT_peak_1110 chr10 98347188 98347203 + 41 NA promoter-TSS (NM_020123) promoter-TSS (NM_020123) -386 NM_020123 56889 Hs.500674 NM_020123 HPRD:18073 TM9SF3 EP70-P-iso|SMBP transmembrane 9 superfamily member 3 protein-coding 0.066667 0.562500 561_WT_peak_168 chr1 35497549 35497673 + 41 NA promoter-TSS (NM_007167) promoter-TSS (NM_007167) -42 NM_007167 9204 Hs.533986 NM_007167 HPRD:10325 ZMYM6 Buster2|MYM|ZBED7|ZNF198L4|ZNF258 zinc finger, MYM-type 6 protein-coding 0.032258 0.504000 -143(TTTTCCCG,-,0.00) 561_WT_peak_1772 chr12 76034911 76035174 + 41 NA Intergenic Intergenic -129624 NM_007043 11103 Hs.645517 NM_007043 HPRD:11027 KRR1 HRB2|RIP-1 KRR1, small subunit (SSU) processome component, homolog (yeast) protein-coding 0.007605 0.428030 -25(CAAAACCA,+,0.00) 561_WT_peak_3458 chr18 20513410 20513600 + 41 NA promoter-TSS (NM_203292) promoter-TSS (NM_203292) 193 NR_039895 100616139 NR_039895 miRBase:MI0017379 MIR4741 - microRNA 4741 ncRNA 0.073684 0.586387 -9(TGGGTCGG,-,0.00) -28(TTTACCCC,-,0.00) 561_WT_peak_175 chr1 36022909 36023190 + 41 NA promoter-TSS (NM_024874) promoter-TSS (NM_024874) -12 NM_024874 79932 Hs.456507 NM_024874 HPRD:11164 KIAA0319L - KIAA0319-like protein-coding 0.078292 0.684397 -163(GGAGGAGGAGGA,-,0.00),41(GGAGGAGGGGCA,-,0.00) -42(CGACCCGGAAAC,+,0.00) -57(CCACCTCCCCGG,+,0.00) 106(TCGCCGCC,+,0.00) -6(TCCCGCCCCT,+,0.00) -88(CAGCGACG,-,0.00) 61(CGGGTAAA,+,0.00) 561_WT_peak_6425 chr6 108582399 108582763 + 41 NA promoter-TSS (NM_003795) promoter-TSS (NM_003795) -117 NM_001300929 8724 Hs.12102 NM_003795 HPRD:09333 SNX3 Grd19|MCOPS8|SDP3 sorting nexin 3 protein-coding 0.090659 0.613699 25(AGCGCCGGAAAC,+,0.00) -58(TGCGGCCGAG,+,0.00) 33(AAACGGCT,+,0.00),34(AACGGCTT,-,0.00),42(TAGCGGCT,+,0.00),43(AGCGGCTT,-,0.00) -26(GAGCTGGCGCTT,-,0.00),-5(CTGCGCCAGCCT,+,0.00) -68(GCCGCGGG,+,0.00) 45(CGGCTTTG,-,0.00),110(CAAAACTG,+,0.00) 92(TTTGCCCG,-,0.00) -18(GCTTCCTGTCTC,-,0.00) -74(CGCGCCGCCGCG,+,0.00),-74(CGCGCCGCCGCG,-,0.00),-66(CGCGGGGCTGCG,+,0.00) -73(GCGCCGCCGC,-,0.00),-68(GCCGCGGGGC,+,0.00) 561_WT_peak_2633 chr15 101835418 101835588 + 41 NA promoter-TSS (NM_003090) promoter-TSS (NM_003090) -43 NM_003090 6627 Hs.528763 NM_003090 HPRD:04629 SNRPA1 Lea1 small nuclear ribonucleoprotein polypeptide A' protein-coding 0.158824 0.748538 -75(CTCGACCGCC,-,0.00) -72(GACCGCCAGGCC,+,0.00) -27(TCTTGCCG,+,0.00),-15(TCGTGGCG,+,0.00) -128(CCCGCGCCCCGC,-,0.00) -123(GCCCCGCCGC,-,0.00) -117(CCGCCAGGCAGC,-,0.00),-70(CCGCCAGGCCGA,-,0.00) 561_WT_peak_4975 chr22 50946669 50946839 + 41 NA promoter-TSS (NM_033200) promoter-TSS (NM_033200) 109 NM_001185011 29781 Hs.730607 NM_014551 ENSG00000025770 NCAPH2 CAPH2 non-SMC condensin II complex, subunit H2 protein-coding 0.088235 0.666667 -58(CGTGGAGGCGCG,+,0.00) 561_WT_peak_2288 chr14 75179879 75180074 + 41 NA promoter-TSS (NM_001039479) promoter-TSS (NM_001039479) 126 NM_015962 51077 Hs.579828 NM_015962 HPRD:12633 FCF1 Bka|C14orf111|UTP24 FCF1 rRNA-processing protein protein-coding 0.025641 0.474490 561_WT_peak_1385 chr11 66726084 66726344 + 41 NA promoter-TSS (NM_000920) promoter-TSS (NM_000920) -367 NM_000920 5091 Hs.89890 NM_000920 HPRD:02032 PC PCB pyruvate carboxylase protein-coding 0.100000 0.666667 -85(CCGACGCC,+,0.00) -157(GAGAGCCCGCCC,+,0.00),-57(GGGCTGTGGCTC,-,0.00) -153(GCCCGCCCCT,+,0.00) -29(GGCGGGGG,+,0.00) -98(CGCCGGAC,+,0.00) -4(TTCACCCG,-,0.00) 1(CCGAGTAG,-,0.00) -63(GTGGCCGGGCTG,+,0.00) 561_WT_peak_2631 chr15 101137156 101137326 + 41 NA intron (NM_001040616, intron 1 of 6) LTR43B|LTR|ERV1 5204 NM_001040616 55180 Hs.105633 NM_018148 LINS LINS1|MRT27|WINS1 lines homolog (Drosophila) protein-coding 0.023529 0.508772 561_WT_peak_5336 chr3 183003702 183003989 + 41 NA intron (NM_015078, intron 14 of 29) intron (NM_015078, intron 14 of 29) 32813 NM_032047 84002 Hs.718506 NM_032047 HPRD:12511 B3GNT5 B3GN-T5|beta3Gn-T5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 protein-coding 0.020906 0.500000 561_WT_peak_3408 chr18 158716 158887 + 41 NA intron (NM_001037334, intron 1 of 14) CpG 318 NM_005151 9097 Hs.464416 NM_005151 HPRD:06279 USP14 TGT ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) protein-coding 0.122807 0.784884 -113(CGCGTAGG,+,0.00) 0(TGGGTCGG,-,0.00) -127(CGGCGCTA,+,0.00) -76(GGACTGGGAGGG,-,0.00) -52(TGCGCGGG,-,0.00) -49(GCGGGGCCGGCG,+,0.00) -114(CCGCGTAG,-,0.00) 561_WT_peak_2710 chr16 17463482 17463712 + 41 NA intron (NM_022166, intron 1 of 11) intron (NM_022166, intron 1 of 11) 101141 NM_022166 64131 Hs.22907 NM_022166 HPRD:12168 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI xylosyltransferase I protein-coding 0.017391 0.519481 32(AGCCGCCT,-,0.00) 33(GCCGCCTTGGGC,+,0.00) 561_WT_peak_6302 chr6 34725001 34725229 + 41 NA non-coding (NR_029472, exon 1 of 5) non-coding (NR_029472, exon 1 of 5) 244 NM_003093 6631 Hs.1063 NM_003093 SNRPC U1C|Yhc1 small nuclear ribonucleoprotein polypeptide C protein-coding 0.061404 0.493450 -30(CCTCCTTCCCGC,+,0.00) 23(TCGCTCGG,-,0.00) 12(AGCCCCGCCC,-,0.00) 561_WT_peak_7421 chr9 127631251 127631441 + 41 NA promoter-TSS (NM_030978) promoter-TSS (NM_030978) -138 NM_030978 81873 Hs.132499 NM_030978 HPRD:12490 ARPC5L ARC16-2 actin related protein 2/3 complex, subunit 5-like protein-coding 0.110526 0.717277 -150(GCCGGGCG,+,0.00) 10(GGCGGCTGCGCG,-,0.00) -52(GGCTCCGCCC,-,0.00) 561_WT_peak_5903 chr5 131808735 131808969 + 41 NA intron (NR_045116, intron 3 of 3) intron (NR_045116, intron 3 of 3) 17613 NM_002198 3659 Hs.436061 NM_002198 HPRD:00961 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding 0.021368 0.574468 -10(AAGCGTCT,+,0.00) -93(GCTGCGGGGC,+,0.00) 561_WT_peak_3598 chr19 6616083 6616273 + 41 NA Intergenic L1M1|LINE|L1 -25015 NM_001252 970 Hs.501497 NM_001252 HPRD:18515 CD70 CD27L|CD27LG|TNFSF7 CD70 molecule protein-coding 0.010526 0.408377 561_WT_peak_1971 chr13 28713075 28713365 + 41 NA promoter-TSS (NR_029383) promoter-TSS (NR_029383) 91 NR_029383 100288730 Hs.123191 NR_029383 PAN3-AS1 - PAN3 antisense RNA 1 ncRNA 0.120690 0.780069 -78(GGGACCGGAGCC,+,0.00) -122(CTGGGCCGCC,-,0.00),15(GGCGGCGGAG,+,0.00) 112(AGAGGCCT,-,0.00) -117(CCGCCCCCCGGG,+,0.00) -3(TCGGGCGG,-,0.00) -132(GGCGGGGG,+,0.00) 106(GGTCTGAGAGGC,-,0.00) 1(GCGGGGCGGGCC,+,0.00) -139(CGTCGCGG,+,0.00) 9(GGCCGCGGCGGC,-,0.00) -131(GCGGGGGAGC,+,0.00) 561_WT_peak_2407 chr15 23076047 23076428 + 41 NA intron (NM_001142275, intron 1 of 4) intron (NM_001142275, intron 1 of 4) 10199 NM_144599 123606 Hs.511797 NM_144599 HPRD:10487 NIPA1 FSP3|SPG6 non imprinted in Prader-Willi/Angelman syndrome 1 protein-coding 0.013123 0.437173 58(TGGGTCGG,-,0.00) 28(GGGCACGA,-,0.00) 73(GCCTCTCAGACC,+,0.00) 561_WT_peak_681 chr1 203256666 203256932 + 41 NA promoter-TSS (NR_117098) promoter-TSS (NR_117098) -29 NR_117098 100506775 Hs.443859 NR_117097 LINC01353 - long intergenic non-protein coding RNA 1353 ncRNA 0.007519 0.501873 -45(GTGCCCTGGCTG,+,0.00) 561_WT_peak_4892 chr22 32534048 32534096 + 41 NA Intergenic HERVE_a-int|LTR|ERV1 16108 NR_040114 23782 Hs.581098 NR_040114 ENSG00000234479 AP1B1P1 ADTB1L1|dJ127L4.2 adaptor-related protein complex 1, beta 1 subunit pseudogene 1 pseudo 0.000000 0.306122 -162(TGGTTTTG,-,0.00),-156(TGGTTTTG,-,0.00) 561_WT_peak_542 chr1 154580416 154580900 + 41 NA promoter-TSS (NM_015840) promoter-TSS (NM_015840) 66 NM_015840 103 Hs.12341 NM_001111 HPRD:07528 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase, RNA-specific protein-coding 0.103306 0.645361 72(GGCTCCGGTTCA,-,0.00) -144(GGCGGCGA,-,0.00),-21(TCGAGGCC,+,0.00),25(GGCGTCGG,-,0.00) -34(CCGCGCCAGCCC,+,0.00) -46(CCGACCGC,+,0.00) -80(GCCCGGCCCG,+,0.00) -77(CGGCCCGA,-,0.00),-61(CGGCACGA,-,0.00),30(CGGCACGG,-,0.00) -35(GCCGCGCC,+,0.00) -128(GGCCGGCCCGGC,-,0.00) -41(CGCTGGGCCGCG,+,0.00),45(CGCGGGTCTGCG,-,0.00) -37(GGGCCGCGCC,+,0.00) -143(GCGGCGAAGG,+,0.00) -126(CCGGCCCGGCTT,+,0.00) 561_WT_peak_4974 chr22 50908422 50908592 + 41 NA intron (NM_002972, intron 1 of 40) intron (NM_002972, intron 1 of 40) 4957 NM_002972 6305 Hs.589924 NM_002972 HPRD:06788 SBF1 CMT4B3|DENND7A|MTMR5 SET binding factor 1 protein-coding 0.041176 0.713450 -109(AGGTGTCT,+,0.00) -155(CCCACCGA,+,0.00) 561_WT_peak_2430 chr15 38987652 38987822 + 41 NA Intergenic Intergenic -1062 NM_207444 400359 Hs.448785 NM_207444 HPRD:13418 C15orf53 - chromosome 15 open reading frame 53 protein-coding 0.005882 0.432749 561_WT_peak_4928 chr22 40451581 40451766 + 41 NA intron (NM_001024843, intron 1 of 23) intron (NM_001024843, intron 1 of 23) 10852 NM_001024843 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing 6B protein-coding 0.005405 0.370968 561_WT_peak_156 chr1 32666221 32666467 + 41 NA intron (NM_001301011, intron 1 of 4) CpG 357 NM_024296 79140 Hs.534482 NM_024296 HPRD:14422 CCDC28B - coiled-coil domain containing 28B protein-coding 0.081301 0.655870 -130(GGCGGAGGGCGG,-,0.00) -49(GGCGGGGG,+,0.00) -141(CGGGAGGAGAGG,+,0.00) -140(GGGAGGAGAGGG,-,0.00) -28(GTCTGACG,-,0.00) -159(TTCACCCG,-,0.00) -3(GCTGCGGAGC,+,0.00) 561_WT_peak_799 chr1 234735551 234735731 + 41 NA Intergenic CpG 9630 NM_182972 359948 Hs.350268 NM_182972 HPRD:17160 IRF2BP2 - interferon regulatory factor 2 binding protein 2 protein-coding 0.105556 0.662983 -79(CGCGCACG,+,0.00) -67(TCGCTCGG,-,0.00) 561_WT_peak_3759 chr19 39882104 39882416 + 41 NA promoter-TSS (NM_019088) promoter-TSS (NM_019088) 297 NM_017592 55588 Hs.611541 NM_017592 HPRD:13748 MED29 IXL mediator complex subunit 29 protein-coding 0.048077 0.597444 -76(AGCGGCCT,-,0.00) -141(CGGCTGGCGGCC,-,0.00) 121(CTGTTTTG,-,0.00) -135(GCGGCCCGGGTC,+,0.00),126(TTGGCCTGGCTG,+,0.00) 561_WT_peak_3695 chr19 19887174 19887388 + 41 NA promoter-TSS (NR_026956) promoter-TSS (NR_026956) -59 NR_026956 284440 Hs.665307 NR_026956 LINC00663 - long intergenic non-protein coding RNA 663 ncRNA 0.065421 0.618605 -119(AAGTGTCT,+,0.00) -159(GGCGTAGA,-,0.00) -41(GGGCTGAGAGCA,-,0.00) 0(GGCGCGGC,-,0.00) 561_WT_peak_2749 chr16 27329757 27329990 + 41 NA intron (NM_001257406, intron 1 of 9) intron (NM_001257406, intron 1 of 9) 4643 NM_001257406 3566 Hs.513457 NM_000418 HPRD:00990 IL4R CD124|IL-4RA|IL4RA interleukin 4 receptor protein-coding 0.021459 0.521368 561_WT_peak_6664 chr7 44925178 44925408 + 41 NA promoter-TSS (NM_033224) promoter-TSS (NM_033224) -309 NM_033224 5814 Hs.349150 NM_033224 HPRD:12325 PURB PURBETA purine-rich element binding protein B protein-coding 0.121739 0.675325 -21(CTCAGCCGCC,-,0.00) -100(CCGGGCGGGCGG,-,0.00) -101(GCCGGGCG,+,0.00) -106(GCCGCGCC,+,0.00) -101(GCCGGGCGGGCG,+,0.00) -163(CGCGGCCTCGCG,-,0.00) -108(GGGCCGCGCC,+,0.00) -159(GCCTCGCGGC,-,0.00) -162(GCGGCCTCGCGG,+,0.00) 561_WT_peak_7329 chr9 91450166 91450362 + 41 NA Intergenic Intergenic -89444 NR_036252 100423015 NR_036252 miRBase:MI0015898 MIR4289 - microRNA 4289 ncRNA 0.005102 0.340102 561_WT_peak_6332 chr6 43337532 43337791 + 41 NA promoter-TSS (NM_014345) promoter-TSS (NM_014345) -480 NM_014345 24149 Hs.509718 NM_014345 HPRD:11707 ZNF318 TZF|ZFP318 zinc finger protein 318 protein-coding 0.069498 0.584615 -78(AGGCCTCT,+,0.00),-43(AGGTGTCT,+,0.00),-13(AAGCCTCT,+,0.00) -27(TCGTGCCG,+,0.00),86(CGGCAGGA,-,0.00) -133(CGGAGCGGAAGG,+,0.00) 561_WT_peak_4209 chr2 96658009 96658272 + 41 NA Intergenic CpG -18159 NR_003698 729234 Hs.720108 NR_003698 ENSG00000231584 FAHD2CP - fumarylacetoacetate hydrolase domain containing 2C, pseudogene pseudo 0.098859 0.761364 -127(GGGCTGGCGGGG,-,0.00) -44(CCGGCCGA,+,0.00) -132(GGCGGGGG,+,0.00),-47(CCCCCGGC,-,0.00) -20(TCCTGCCG,+,0.00) 13(GGCTGGCCCCGG,-,0.00) -129(GGGGGCTGGCGG,+,0.00),6(GCGGCCAGGCTG,+,0.00),11(CAGGCTGGCCCC,-,0.00) 561_WT_peak_1381 chr11 66383671 66383941 + 41 NA promoter-TSS (NM_001198837) promoter-TSS (NM_001198837) -247 NM_001198846 100526737 Hs.523822 NM_001198845 ENSG00000173933 RBM14-RBM4 COAZ RBM14-RBM4 readthrough protein-coding 0.081481 0.675277 2(CTCTGCCGCC,-,0.00) -4(AGGCCTCT,+,0.00) 49(CCTCTTCTTCCC,-,0.00),63(CCCCCTCTCCCG,-,0.00) -118(CGGGTTTG,-,0.00) 8(CGCCGGCGCCGC,-,0.00) 72(CCGCCACG,-,0.00) 71(CCCGCCACGGGC,+,0.00) 561_WT_peak_6649 chr7 42951679 42951878 + 41 NA promoter-TSS (NM_024054) promoter-TSS (NM_024054) -89 NM_024054 79020 Hs.698120 NM_024054 HPRD:09861 C7orf25 - chromosome 7 open reading frame 25 protein-coding 0.100503 0.710000 -59(CGCTTGCGCCGC,-,0.00) -97(CGTGGCGG,+,0.00) 561_WT_peak_1009 chr10 64492826 64493065 + 41 NA Intergenic Intergenic -71571 NM_032804 84890 Hs.99821 NM_032804 HPRD:12566 ADO C10orf22 2-aminoethanethiol (cysteamine) dioxygenase protein-coding 0.008368 0.425000 -13(AAGCCTCT,+,0.00) 561_WT_peak_4100 chr2 64440169 64440556 + 41 NA Intergenic Intergenic -7743 NR_033837 150992 Hs.272318 NR_033837 ENSG00000230923 LINC00309 NCRNA00309 long intergenic non-protein coding RNA 309 ncRNA 0.005168 0.389175 13(AGCCACTA,-,0.00) 561_WT_peak_3940 chr19 59074015 59074220 + 41 NA exon (NM_003422, exon 6 of 6) exon (NM_003422, exon 6 of 6) 3564 NR_027334 100131691 Hs.743767 NR_027334 ENSG00000267858 LOC100131691 - uncharacterized LOC100131691 ncRNA 0.146341 0.728155 -108(GGCGGCCGAA,+,0.00) -85(TCGACGCA,+,0.00) 13(GGGGCCGGGA,-,0.00) 561_WT_peak_4004 chr2 28113754 28113981 + 41 NA promoter-TSS (NM_022128) promoter-TSS (NM_022128) 114 NR_028308 100302650 Hs.729719 NR_028308 BRE-AS1 - BRE antisense RNA 1 ncRNA 0.030837 0.548246 -25(AGGCGTCT,+,0.00) -157(GGCGTGGA,-,0.00) -77(CCTTCTCATCCC,+,0.00) -39(GCCCCCAAGGCC,+,0.00) 561_WT_peak_7438 chr9 130890401 130890574 + 41 NA promoter-TSS (NR_024425) promoter-TSS (NR_024425) -20 NM_001256335 80142 Hs.495219 NM_025072 HPRD:07458 PTGES2 C9orf15|GBF-1|GBF1|PGES2|mPGES-2 prostaglandin E synthase 2 protein-coding 0.098266 0.603448 -144(AGCCCCGGAAAC,+,0.00) -123(CGGCACCA,-,0.00) -49(TTTTCCCG,-,0.00) 561_WT_peak_7054 chr8 74206357 74206557 + 40 NA promoter-TSS (NM_172037) promoter-TSS (NM_172037) -380 NM_172037 157506 Hs.244940 NM_172037 HPRD:07605 RDH10 SDR16C4 retinol dehydrogenase 10 (all-trans) protein-coding 0.105000 0.696517 19(GGAGGAGGATGG,-,0.00) -18(AAGTGGCT,+,0.00) -96(CGTCGCTC,+,0.00) -118(CGCCGCTCCGCG,-,0.00) 561_WT_peak_5210 chr3 113251317 113251505 + 40 NA 5' UTR (NM_017699, exon 1 of 25) 5' UTR (NM_017699, exon 1 of 25) 193 NM_017699 54847 Hs.591291 NM_017699 HPRD:12111 SIDT1 B830021E24Rik|SID-1|SID1 SID1 transmembrane family, member 1 protein-coding 0.053191 0.486772 -69(CAGACCGA,+,0.00) -115(GCTTTCTATTTC,-,0.00) -95(CAGCCAGGGTGC,-,0.00) 561_WT_peak_5989 chr5 153418202 153418396 + 40 NA promoter-TSS (NM_001242336) promoter-TSS (NM_001242336) 198 NM_018691 10827 Hs.166551 NM_018691 HPRD:12831 FAM114A2 133K02|C5orf3 family with sequence similarity 114, member A2 protein-coding 0.092784 0.625641 -88(AACCGCTT,-,0.00) -53(GTCCGCCG,-,0.00) -91(CTAAACCG,+,0.00) -16(ACTTCGGCTGCC,-,0.00) -49(GCCGCCCA,+,0.00) 561_WT_peak_6214 chr6 27775308 27775599 + 40 NA promoter-TSS (NM_003509) promoter-TSS (NM_003509) 256 NM_003519 8340 Hs.137594 NM_003519 HPRD:11898 HIST1H2BL H2B/c|H2BFC|dJ97D16.4 histone cluster 1, H2bl protein-coding 0.085911 0.619863 89(CGTACACG,-,0.00) -99(CGGAAGCAGCAG,+,0.00) 561_WT_peak_7429 chr9 129567246 129567482 + 40 NA promoter-TSS (NM_001135776) promoter-TSS (NM_001135776) 79 NM_001135776 23099 Hs.355581 NM_014007 HPRD:08346 ZBTB43 ZBTB22B|ZNF-X|ZNF297B zinc finger and BTB domain containing 43 protein-coding 0.072034 0.666667 -51(GGCGGCAGAG,+,0.00) -121(AAGCGTTT,+,0.00) 49(TCGGTGGG,-,0.00) -30(GGCGGGGG,+,0.00) -111(GGGGGCTGAAGG,+,0.00) 561_WT_peak_5258 chr3 131100193 131100395 + 40 NA promoter-TSS (NR_038976) promoter-TSS (NR_038976) 25 NR_038976 339874 Hs.718930 NR_038976 ENSG00000250608 LOC339874 - uncharacterized LOC339874 ncRNA 0.054455 0.615764 -43(CTTTTGGCTCCC,-,0.00) 5(GGCGCGGC,-,0.00) 18(CTCTAGCCCCGC,-,0.00) 22(AGCCCCGCCC,-,0.00) 561_WT_peak_337 chr1 100435676 100435846 + 40 NA promoter-TSS (NM_001271685) promoter-TSS (NM_001271685) -231 NM_001271685 23443 Hs.448979 NM_012243 HPRD:10413 SLC35A3 AMRS solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 protein-coding 0.076471 0.719298 -47(GGAGGAGGAGGA,-,0.00) -78(TAGCGGCT,+,0.00) -98(AGGGGCGGGA,-,0.00) -90(GAACCAGGAGGC,+,0.00) -131(TGCGCGGG,-,0.00) -73(GCTGCGGGGC,+,0.00) 561_WT_peak_7479 chr9 138392553 138392726 + 40 NA promoter-TSS (NM_001048265) promoter-TSS (NM_001048265) 162 NR_051968 51116 Hs.382044 NM_016034 HPRD:14783 MRPS2 MRP-S2|S2mt mitochondrial ribosomal protein S2 protein-coding 0.144509 0.764368 -149(CTCGGCCGCG,-,0.00) -57(GGGACCCGATGG,+,0.00) -22(CCGGGGCGAGCG,+,0.00) -164(AGCCATGGCGAC,-,0.00) 561_WT_peak_1770 chr12 75784988 75785170 + 40 NA promoter-TSS (NM_001286549) promoter-TSS (NM_001286549) 229 NM_001270396 144321 Hs.406728 NM_152436 HPRD:17538 GLIPR1L2 - GLI pathogenesis-related 1 like 2 protein-coding 0.076923 0.551913 -16(GCCGGAAGGCGG,-,0.00) -91(CGAGTACG,+,0.00) -67(GCTGCGGGGC,+,0.00) 561_WT_peak_5601 chr4 140477269 140477441 + 40 NA 5' UTR (NM_030648, exon 1 of 8) 5' UTR (NM_030648, exon 1 of 8) 222 NM_030648 80854 Hs.480792 NM_030648 HPRD:16226 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing (lysine methyltransferase) 7 protein-coding 0.087209 0.705202 -44(GGAGGAGGAGGA,-,0.00),-41(GGAGGAGGAGGA,-,0.00) -77(GGCGGCTGAG,+,0.00) -142(TGGCGGCT,+,0.00) -13(GGGCTGGCTCGC,-,0.00) -99(TCCCGTCCCT,+,0.00) -154(CGTCGCTA,+,0.00) -111(TGCGCGGC,-,0.00) -117(CGGGGCTGCGCG,-,0.00) -147(ATCCATGGCGGC,-,0.00) -113(GCTGCGCGGC,+,0.00) 561_WT_peak_7530 chrX 47004510 47004774 + 40 NA promoter-TSS (NM_001204467) promoter-TSS (NM_001204467) 25 NM_001204467 8241 Hs.401509 NM_005676 HPRD:02095 RBM10 DXS8237E|GPATC9|GPATCH9|S1-1|TARPS|ZRANB5 RNA binding motif protein 10 protein-coding 0.083333 0.675472 -15(TCGTCGCC,+,0.00) -14(CGTCGCCA,+,0.00) -81(CCGGGGCCGGCC,+,0.00) 561_WT_peak_202 chr1 42921902 42922144 + 40 NA promoter-TSS (NM_001146192) promoter-TSS (NM_001146192) 11 NM_001287507 79717 Hs.706662 NM_024664 HPRD:07760 PPCS - phosphopantothenoylcysteine synthetase protein-coding 0.049587 0.580247 70(ACCGCCCA,+,0.00) 561_WT_peak_3666 chr19 16189540 16189720 + 40 NA intron (NM_003290, intron 1 of 7) intron (NM_003290, intron 1 of 7) 2495 NM_003290 7171 Hs.631618 NM_003290 HPRD:11734 TPM4 HEL-S-108 tropomyosin 4 protein-coding 0.022222 0.441989 561_WT_peak_874 chr10 8095348 8095520 + 40 NA promoter-TSS (NR_104329) promoter-TSS (NR_104329) 13 NR_024256 399717 Hs.158992 NM_207423 HPRD:13518 GATA3-AS1 - GATA3 antisense RNA 1 ncRNA 0.110465 0.710983 -91(CGCCGCTA,+,0.00) -155(TTTTCCCG,-,0.00) -97(CCCGGGCGCCGC,-,0.00) -19(CGCGGCTCGGCC,-,0.00) 561_WT_peak_1473 chr11 107992404 107992595 + 40 NA intron (NM_000019, intron 1 of 11) CpG 241 NM_000019 38 Hs.232375 NM_000019 HPRD:01946 ACAT1 ACAT|MAT|T2|THIL acetyl-CoA acetyltransferase 1 protein-coding 0.115183 0.682292 -67(CCGGGCGCGCGG,-,0.00) -93(CCCGCGGC,-,0.00),-75(CCCGCGGC,-,0.00) -17(AAAAACCG,+,0.00) -112(CCGCCTCG,-,0.00) -72(GCGGCCCGGGCG,+,0.00) 561_WT_peak_4216 chr2 97006678 97006767 + 40 NA intron (NM_001281712, intron 1 of 16) L1MC5|LINE|L1 5243 NM_015341 23397 Hs.308045 NM_015341 HPRD:03820 NCAPH BRRN1|CAP-H non-SMC condensin I complex, subunit H protein-coding 0.000000 0.333333 561_WT_peak_1536 chr12 74323 74534 + 40 NA Intergenic CpG 6821 NR_026823 677784 Hs.722487 NR_026823 ENSG00000206114 FAM138D F379 family with sequence similarity 138, member D ncRNA 0.123223 0.768868 -41(GGAGGCGGGCGG,-,0.00) -60(GGACCCGGAGGG,+,0.00) -140(CCGGGAGGGCGG,-,0.00) -12(CTGACCGA,+,0.00) -28(AGGCCCGGGA,-,0.00) -104(GCCGCGGG,+,0.00) -161(CGGAAGCGGCGG,+,0.00) -61(GGGACCCGGAGG,+,0.00) -8(CCGAGAAG,-,0.00) -82(GGGCCTGGCGGG,-,0.00) -83(GGGGCCTGGCGG,+,0.00) 561_WT_peak_1453 chr11 93474093 93474343 + 40 NA promoter-TSS (NM_001286070) promoter-TSS (NM_001286070) 485 NM_024116 79101 Hs.355750 NM_024116 HPRD:14679 TAF1D JOSD3|RAFI41|TAF(I)41|TAFI41 TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa protein-coding 0.080000 0.525896 -86(CGGCGCGA,-,0.00) -92(GAAAACCG,+,0.00) -152(TTTACCCG,-,0.00) 561_WT_peak_4703 chr20 56881848 56882026 + 40 NA intron (NR_003505, intron 2 of 16) MLT1H2|LTR|ERVL-MaLR 2558 NR_003505 55370 Hs.473179 NM_018498 HPRD:17895 PPP4R1L C20orf192|PRO1085 protein phosphatase 4, regulatory subunit 1-like pseudo 0.022472 0.541899 561_WT_peak_3216 chr17 44656622 44656965 + 40 NA intron (NM_001288812, intron 1 of 4).2 CpG 295 NM_001288812 51326 Hs.559259 NM_016632 HPRD:17424 ARL17A ARF1P2|ARL17P1 ADP-ribosylation factor-like 17A protein-coding 0.081633 0.656977 -58(AGGCCGCT,+,0.00) -100(CCGGCTCCCGGG,+,0.00) -122(CGTGCGCG,-,0.00) -103(CGCCCGGC,-,0.00) -92(CGGGGAAA,+,0.00) 14(CCTTCGGTTCCT,-,0.00) -120(TGCGCGGC,-,0.00) -64(GCTGCCAGGC,+,0.00) -113(CAGCCAGGCACG,-,0.00),-63(CTGCCAGGCCGC,-,0.00) 561_WT_peak_732 chr1 220262995 220263260 + 40 NA promoter-TSS (NM_006085) promoter-TSS (NM_006085) 68 NM_001286149 10380 Hs.406134 NM_006085 HPRD:06814 BPNT1 HEL20|PIP 3'(2'), 5'-bisphosphate nucleotidase 1 protein-coding 0.064151 0.537594 -111(AGACACTT,-,0.00) -122(CGTTGGAC,+,0.00) -94(CAAAAGCG,+,0.00) 80(CGGGAAAA,+,0.00) 561_WT_peak_4643 chr20 43150403 43150573 + 40 NA intron (NM_198941, intron 1 of 10) CpG 238 NM_006811 10955 Hs.272168 NM_006811 HPRD:06201 SERINC3 AIGP1|DIFF33|SBBI99|TDE|TDE1|TMS-1 serine incorporator 3 protein-coding 0.076471 0.678363 -149(GGCCCCGGAGAC,+,0.00) -70(TCGAGGCC,+,0.00) -44(GTCCGGCG,-,0.00) -164(CGGATTTG,-,0.00) -62(TTTCCCCG,-,0.00) 561_WT_peak_6008 chr5 159846130 159846340 + 40 NA promoter-TSS (NM_006425) promoter-TSS (NM_006425) -67 NM_006425 10569 Hs.435342 NM_006425 HPRD:12074 SLU7 9G8|hSlu7 SLU7 splicing factor homolog (S. cerevisiae) protein-coding 0.076190 0.563981 -113(GGCGGAGGGGGG,-,0.00) -119(GCCGGGGG,+,0.00) -114(GGGCGGAGGGGG,-,0.00) -41(TTTACCCG,-,0.00) -13(TGGGCGGC,-,0.00) -124(GCGGGGCCGGGG,+,0.00) 561_WT_peak_2186 chr14 45722496 45722689 + 40 NA promoter-TSS (NM_018353) promoter-TSS (NM_018353) 13 NM_018353 55320 Hs.732769 NM_018353 HPRD:12629 MIS18BP1 C14orf106|HSA242977|KNL2|M18BP1 MIS18 binding protein 1 protein-coding 0.072539 0.592784 561_WT_peak_3987 chr2 25537549 25537719 + 40 NA intron (NM_175629, intron 1 of 22) intron (NM_175629, intron 1 of 22) 13956 NR_031570 100302246 NR_031570 miRBase:MI0003815 MIR1301 MIRN1301|hsa-mir-1301 microRNA 1301 ncRNA 0.017647 0.649123 561_WT_peak_5654 chr4 187112422 187112708 + 40 NA promoter-TSS (NR_046264) promoter-TSS (NR_046264) 79 NR_046264 651430 Hs.727796 NR_046264 FLJ38576 - uncharacterized LOC651430 ncRNA 0.115385 0.728223 63(CCGGCCTCCTCC,+,0.00) -109(CGAGCCGGATGC,+,0.00),82(GCCTCCGGGCCT,-,0.00) 20(CCGACGCC,+,0.00) 0(GGGCTGCCGCGG,-,0.00) 18(TTCCGACG,-,0.00) -129(TGCGCAGC,-,0.00) 27(CCCTGACCCCGC,-,0.00) 561_WT_peak_4834 chr22 19842581 19842865 + 40 NA promoter-TSS (NM_024627) promoter-TSS (NM_024627) -261 NM_053004 54584 Hs.105642 NM_053004 HPRD:13591 GNB1L DGCRK3|GY2|WDR14|WDVCF guanine nucleotide binding protein (G protein), beta polypeptide 1-like protein-coding 0.098592 0.708772 -4(GGCGTAGA,-,0.00),73(GGCGTCGA,-,0.00) -89(ACGGTCGG,-,0.00) -139(GCCGCGCC,+,0.00) 91(GCGGGGCCGGGC,+,0.00) -111(GGGCCGCGTG,+,0.00),-78(AAAGCTGCCC,-,0.00),94(GGGCCGGGCT,+,0.00) 88(GCTGCGGGGC,+,0.00) 561_WT_peak_3442 chr18 13137968 13138149 + 40 NA Intergenic MER51A|LTR|ERV1 -80671 NM_181482 753 Hs.731853 NM_004338 HPRD:07358 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding 0.038674 0.494505 -124(AGCGGCCT,-,0.00) -5(TCGGTCTG,-,0.00) -104(GGGCTGCGTT,+,0.00) -87(CTTCTCGG,+,0.00) 561_WT_peak_7557 chrX 54666147 54666230 + 40 NA Intergenic CpG 109544 NM_019067 54552 Hs.654677 NM_019067 GNL3L - guanine nucleotide binding protein-like 3 (nucleolar)-like protein-coding 0.084337 0.595238 561_WT_peak_2844 chr16 53468438 53468614 + 40 NA exon (NM_005611, exon 1 of 22) exon (NM_005611, exon 1 of 22) 175 NM_005611 5934 Hs.513609 NM_005611 HPRD:01576 RBL2 P130|Rb2 retinoblastoma-like 2 protein-coding 0.130682 0.751412 -65(GGAGGAGGAGGA,-,0.00),-62(GGAGGAGGACGA,-,0.00) -103(CCCCCGCC,-,0.00) -42(CGGAAGACGCCG,+,0.00) -151(GCCGCCCA,+,0.00),-34(GCCGCGCC,+,0.00) -47(CGAGGCGG,+,0.00),-21(CCGAGTCG,-,0.00) 561_WT_peak_1774 chr12 76373158 76373279 + 40 NA Intergenic Intergenic 52338 NM_007350 22822 Hs.602085 NM_007350 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology-like domain, family A, member 1 protein-coding 0.016529 0.426230 561_WT_peak_669 chr1 198638211 198638330 + 40 NA intron (NR_052021, intron 2 of 2) intron (NR_052021, intron 2 of 2) 30172 NM_002838 5788 Hs.654514 NM_002838 HPRD:01050 PTPRC B220|CD45|CD45R|GP180|L-CA|LCA|LY5|T200 protein tyrosine phosphatase, receptor type, C protein-coding 0.008403 0.325000 -89(AAGTGGTT,+,0.00) 561_WT_peak_7497 chrX 7895196 7895366 + 40 NA intron (NM_001142389, intron 1 of 6) CpG 194 NM_004650 8228 Hs.264 NM_004650 HPRD:02112 PNPLA4 DXS1283E|GS2|iPLA2eta patatin-like phospholipase domain containing 4 protein-coding 0.064706 0.707602 -100(AGGGCCGGGG,-,0.00) -120(CCCGCGGC,-,0.00) -102(GCAGGGCCGGGG,+,0.00) -106(GCCGGCAGGGCC,+,0.00) 561_WT_peak_988 chr10 50746874 50747073 + 40 NA intron (NM_001277059, intron 1 of 5) CpG 196 NM_001277058 101243544 Hs.49063 NM_001277058 ENSG00000243251 ERCC6-PGBD3 CPFP|CSB-PGBD3 ERCC6-PGBD3 readthrough protein-coding 0.115578 0.720000 2(AGACGCTA,-,0.00),18(AGCCGCCT,-,0.00) -101(CCGCCCGA,+,0.00),-55(TCGGCCGG,-,0.00) -114(GCGGGGCCGCGG,+,0.00) -115(CGCGGGGCCGCG,+,0.00),-115(CGCGGGGCCGCG,-,0.00) -97(CCGAGAAG,-,0.00) -123(GGCCAAGGCGCG,-,0.00) -157(GCGTCCTCGCTG,+,0.00),-106(GCGGCCCGCCCG,+,0.00) 561_WT_peak_3190 chr17 41392385 41392537 + 40 NA Intergenic Intergenic -11399 NR_047479 100874261 Hs.546898 NR_047479 ENSG00000236383 LINC00854 TMEM106A-AS1 long intergenic non-protein coding RNA 854 ncRNA 0.013158 0.457516 -115(GCTTCCTATTTT,-,0.00) 561_WT_peak_5868 chr5 107717827 107718037 + 40 NA promoter-TSS (NM_001163315) promoter-TSS (NM_001163315) -133 NM_001163315 64839 Hs.657225 NM_022824 HPRD:10950 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine-rich repeat protein 17 protein-coding 0.133333 0.739336 -94(CCGGGACGGCCG,-,0.00) -127(TCGTGGCG,+,0.00),-76(CGGCACTA,-,0.00) -67(GGGAAGAAGCCG,+,0.00) -153(GGGCGGAGCC,+,0.00),35(GCGCCGCGTT,+,0.00) -126(CGTGGCGG,+,0.00) 561_WT_peak_6830 chr7 121036457 121036677 + 39 NA promoter-TSS (NM_014888) promoter-TSS (NM_014888) -145 NM_001040020 10447 Hs.434053 NM_014888 HPRD:12270 FAM3C ILEI family with sequence similarity 3, member C protein-coding 0.109091 0.714932 -78(CCCCCGGC,-,0.00) -109(CGGAGGGAGGGG,+,0.00) 42(TTTACACG,-,0.00) 561_WT_peak_6115 chr6 17600549 17600867 + 39 NA exon (NM_016255, exon 1 of 5) exon (NM_016255, exon 1 of 5) 190 NM_016255 51439 Hs.95260 NM_016255 HPRD:13316 FAM8A1 AHCP family with sequence similarity 8, member A1 protein-coding 0.100629 0.739812 -43(CCACCCTCCCGG,+,0.00),-35(CCGGGCAGGACG,-,0.00) -79(GGCGACGA,-,0.00) 67(CCCAGGCCCCGG,-,0.00) 44(CCGCGACG,-,0.00) 97(GCCTCGCGGC,-,0.00) 561_WT_peak_6322 chr6 42420975 42421220 + 39 NA Intergenic Intergenic -1308 NM_033502 55809 Hs.485392 NM_018415 HPRD:11647 TRERF1 BCAR2|HSA277276|RAPA|TREP132|TReP-132|dJ139D8.5 transcriptional regulating factor 1 protein-coding 0.089796 0.707317 -137(TCCTCCTCCTCC,+,0.00),-19(GGCGGAGGGCAA,-,0.00) -25(GGCGGGGG,+,0.00) -97(CGGGAGCAGCTG,+,0.00) -66(GGGCTGAAAGGC,-,0.00) -103(CCAAACCG,+,0.00) -56(GCGAGCCGAAGG,+,0.00) -33(GCGGCGCGGGCG,+,0.00) 14(CCGAGAAG,-,0.00) 561_WT_peak_862 chr10 6087401 6087571 + 39 NA intron (NM_000417, intron 1 of 7) intron (NM_000417, intron 1 of 7) 16847 NM_000417 3559 Hs.231367 NM_000417 HPRD:00986 IL2RA CD25|IDDM10|IL2R|TCGFR|p55 interleukin 2 receptor, alpha protein-coding 0.023529 0.426901 -87(GCTTCCGGGCAT,-,0.00) -101(TCGGTCGA,-,0.00) -105(CTTCTCGG,+,0.00) 561_WT_peak_1196 chr11 6639947 6640025 + 39 NA intron (NM_000391, intron 3 of 12) intron (NM_000391, intron 3 of 12) 706 NM_000391 1200 Hs.523454 NM_000391 HPRD:06415 TPP1 CLN2|LPIC|SCAR7|TPP-1 tripeptidyl peptidase I protein-coding 0.025641 0.607595 561_WT_peak_6306 chr6 36098421 36098635 + 39 NA intron (NM_002754, intron 1 of 11) CpG 267 NM_002754 5603 Hs.178695 NM_002754 HPRD:09113 MAPK13 MAPK 13|MAPK-13|PRKM13|SAPK4|p38delta mitogen-activated protein kinase 13 protein-coding 0.093458 0.753488 12(GCGCCCTCCCCG,+,0.00),13(CGCCCTCCCCGG,+,0.00) -83(GGCGGGGG,+,0.00) -58(CCCTTTCCGCCC,+,0.00) -35(GGCTGGCCCCTC,-,0.00) -44(CCCGCCCTGGGC,+,0.00) -131(GCAGCGGGGC,+,0.00),-90(GCTGGGGGGC,+,0.00) 561_WT_peak_2706 chr16 14836301 14836472 + 39 NA Intergenic CpG -8284 NM_001277323 642778 NM_001277323 ENSG00000224712 NPIPA3 - nuclear pore complex interacting protein family, member A3 protein-coding 0.093567 0.732558 -30(GGGCCCGGGTTC,+,0.00) -36(GCCGCGGG,+,0.00) -34(CGCGGGGCCCGG,-,0.00),-33(GCGGGGCCCGGG,+,0.00) -16(CTTGGCGG,+,0.00) -154(GCTGCGGTGC,+,0.00),-36(GCCGCGGGGC,+,0.00) -72(GCTTCCTGGCTG,+,0.00) 561_WT_peak_26-2 chr1 2478414 2478708 + 39 NA Intergenic Intergenic -9243 NM_001297605 8764 Hs.512898 NM_003820 HPRD:04122 TNFRSF14 ATAR|CD270|HVEA|HVEM|LIGHTR|TR2 tumor necrosis factor receptor superfamily, member 14 protein-coding 0.057823 0.691525 34(GAGCGCCTCCCC,+,0.00) -130(AGGGCGGGGC,-,0.00) -6(CGCCCGGC,-,0.00) -127(GCGGGGCGTGGG,+,0.00),66(GCCAGGCCCCGC,-,0.00) -134(CGCCAGGGCGGG,-,0.00) 71(GCCCCGCAGC,-,0.00) 45(CAGCCGGGCAGC,-,0.00),64(CAGCCAGGCCCC,-,0.00) 561_WT_peak_7642 chrY 2709495 2709683 + 39 NA promoter-TSS (NM_001008) promoter-TSS (NM_001008) -34 NM_001008 6192 Hs.282376 NM_001008 HPRD:15963 RPS4Y1 RPS4Y|S4 ribosomal protein S4, Y-linked 1 protein-coding 0.047872 0.428571 561_WT_peak_4498 chr2 234159960 234160142 + 39 NA promoter-TSS (NM_001190267) promoter-TSS (NM_001190267) -166 NM_001190266 55054 Hs.529322 NM_017974 HPRD:16498 ATG16L1 APG16L|ATG16A|ATG16L|IBD10|WDR30 autophagy related 16-like 1 (S. cerevisiae) protein-coding 0.038462 0.502732 -3(CCTCCTTCCCGC,+,0.00) 6(CGCCCGGC,-,0.00) 561_WT_peak_6532 chr6 157886327 157886554 + 39 NA intron (NM_153746, intron 1 of 8) intron (NM_153746, intron 1 of 8) -63724 NR_037463 100500899 NR_037463 MIR3692 - microRNA 3692 ncRNA 0.004405 0.421053 34(CAAAACGG,+,0.00) 561_WT_peak_2961 chr16 89984371 89984582 + 39 NA 5' UTR (NM_002386, exon 1 of 1) 5' UTR (NM_002386, exon 1 of 1) 189 NM_002386 4157 Hs.513829 NM_002386 HPRD:01118 MC1R CMM5|MSH-R|SHEP2 melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor) protein-coding 0.099526 0.702830 -68(ATGTGGCT,+,0.00) -12(CCGGGGAGGGCG,-,0.00),-11(CGGGGAGGGCGG,-,0.00) 31(GAGCGACG,-,0.00) -101(GTGCGACG,-,0.00) -116(CCTGCGGAGC,+,0.00) 561_WT_peak_2193 chr14 50319342 50319517 + 39 NA exon (NM_004713, exon 1 of 33) exon (NM_004713, exon 1 of 33) 110 NM_004713 9147 Hs.655964 NM_004713 HPRD:08494 NEMF NY-CO-1|SDCCAG1 nuclear export mediator factor protein-coding 0.080000 0.625000 -48(AAGCGGCT,+,0.00) -77(CGAGTACG,+,0.00) -49(AAAGCGGCTC,-,0.00) 561_WT_peak_5789 chr5 68485098 68485281 + 39 NA promoter-TSS (NM_022909) promoter-TSS (NM_022909) -186 NM_022909 64946 Hs.631967 NM_022909 HPRD:12029 CENPH - centromere protein H protein-coding 0.043716 0.521739 -85(CGTCTCTA,+,0.00) -49(ATCCGACG,-,0.00) -18(TTTACCAG,-,0.00) 561_WT_peak_811 chr1 236029553 236029778 + 39 NA intron (NM_001301365, intron 1 of 52) CpG 562 NM_000081 1130 Hs.532411 NM_000081 HPRD:06060 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding 0.075556 0.615044 -112(CGGACCGA,+,0.00) 561_WT_peak_7179 chr8 144629371 144629594 + 39 NA Intergenic MER41B|LTR|ERV1 -5862 NM_015117 23144 Hs.521915 NM_015117 HPRD:15697 ZC3H3 ZC3HDC3 zinc finger CCCH-type containing 3 protein-coding 0.022422 0.441964 561_WT_peak_498 chr1 149824720 149824910 + 39 NA TTS (NM_021059).2 TTS (NM_021059).2 634 NM_001005464 333932 Hs.647745 NM_001005464 HIST2H3A H3/n|H3/o histone cluster 2, H3a protein-coding 0.105263 0.685864 -109(CAAAACGG,+,0.00) -123(GCTTAGGCTCCC,-,0.00) -87(GCTGCGGTGC,+,0.00) 561_WT_peak_3330 chr17 72199702 72200036 + 39 NA promoter-TSS (NM_000999) promoter-TSS (NM_000999) 74 NM_001035258 6169 Hs.380953 NM_000999 HPRD:16048 RPL38 L38 ribosomal protein L38 protein-coding 0.071856 0.591045 -73(CTGCCCGGAAAC,+,0.00) -37(TTTCCCCG,-,0.00),128(CGGGAAAA,+,0.00) 83(GGGAGGAGAAGG,+,0.00) 106(GGGCCGATAT,+,0.00) 145(CTGCCAGCCCCC,-,0.00) 561_WT_peak_5597 chr4 140099404 140099685 + 39 NA Intergenic CpG -38914 NM_201999 1998 Hs.634040 NM_006874 HPRD:16856 ELF2 EU32|NERF|NERF-1A|NERF-1B|NERF-1a,b|NERF-2 E74-like factor 2 (ets domain transcription factor) protein-coding 0.046263 0.517730 -48(GCTTCTGGTTTC,-,0.00) 561_WT_peak_1230 chr11 19138716 19138926 + 39 NA exon (NM_019028, exon 1 of 17) exon (NM_019028, exon 1 of 17) 129 NM_001001483 54503 Hs.188569 NM_019028 HPRD:15710 ZDHHC13 HIP14L|HIP3RP zinc finger, DHHC-type containing 13 protein-coding 0.076190 0.715640 23(AGGCCGCT,+,0.00) -23(CCGGGAGAGCGG,-,0.00) -149(GGGCTGGCGGGC,-,0.00),-77(GGGCCGGGGCTG,-,0.00) -27(GGGGCCGGGA,-,0.00) -47(GCCGGGCG,+,0.00) -130(AGTCGCTA,+,0.00) -151(GCGGGCTGGCGG,+,0.00),-143(GCGGGCTGGCGG,+,0.00),-50(GCGGCCGGGCGG,+,0.00) 561_WT_peak_1146 chr10 112620447 112620622 + 39 NA Intergenic Intergenic 10128 NR_026932 282997 Hs.599931 NR_026932 PDCD4-AS1 - PDCD4 antisense RNA 1 ncRNA 0.011429 0.488636 -157(GGGTTTTG,-,0.00) 561_WT_peak_7401 chr9 117150449 117150624 + 39 NA intron (NM_030767, intron 1 of 21) MIR3|SINE|MIR 6149 NM_030767 80709 Hs.494895 NM_030767 HPRD:16148 AKNA - AT-hook transcription factor protein-coding 0.017143 0.585227 -45(AGAGGCTT,-,0.00) -102(TCATCTCAGCCC,+,0.00),-5(CCCTCTAGGCCC,+,0.00) 561_WT_peak_2255 chr14 64855029 64855206 + 39 NA 5' UTR (NM_005956, exon 1 of 28) 5' UTR (NM_005956, exon 1 of 28) 358 NM_005956 4522 Hs.652308 NM_005956 HPRD:01403 MTHFD1 MTHFC|MTHFD methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase protein-coding 0.050847 0.573034 -9(CGCGTAAG,+,0.00) -51(GGCCATGGCGCC,-,0.00) -112(GCTGCGGAGG,+,0.00) 561_WT_peak_1543 chr12 751740 752001 + 39 NA intron (NR_122124, intron 4 of 4) CpG 981 NM_001294346 4815 Hs.655804 NM_016533 HPRD:09530 NINJ2 - ninjurin 2 protein-coding 0.091954 0.683206 -80(GGAGGGGGGCGG,-,0.00) -123(AGACTGGCGCTC,-,0.00) -70(GGGCTGGGAGTG,-,0.00) 61(CAAAGCCG,+,0.00) -8(CGGGAAAA,+,0.00) -48(GGGAGACGAAGG,+,0.00) -96(GGGCGGCGCT,+,0.00) 7(GCGGCCCTGGGC,+,0.00) -29(GCTGCGGGGC,+,0.00) 63(AAGCCGGGCCCC,-,0.00) 561_WT_peak_3378 chr17 78695040 78695366 + 39 NA intron (NM_020761, intron 4 of 33) intron (NM_020761, intron 4 of 33) 84229 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA 0.039877 0.596330 -62(CGGGAAAA,+,0.00) 561_WT_peak_797 chr1 234509175 234509364 + 39 NA promoter-TSS (NM_001206641) promoter-TSS (NM_001206641) 55 NM_001206641 388753 Hs.23198 NM_001012985 HPRD:18535 COA6 C1orf31 cytochrome c oxidase assembly factor 6 homolog (S. cerevisiae) protein-coding 0.089947 0.621053 -149(TCCCGCCCCT,+,0.00) -96(CGGTTTCG,-,0.00) -160(GAAACAGGAAGT,+,0.00) -2(ACCGCGCC,+,0.00) -8(CTCGGCACCGCG,-,0.00) 561_WT_peak_5296 chr3 156202178 156202345 + 39 NA intron (NM_172160, intron 8 of 13) intron (NM_172160, intron 8 of 13) -37567 NR_046618 100874084 Hs.131282 NR_046618 ENSG00000242370 KCNAB1-AS1 - KCNAB1 antisense RNA 1 ncRNA 0.000000 0.440476 561_WT_peak_4620 chr20 35233572 35233866 + 39 NA promoter-TSS (NM_001199534) promoter-TSS (NM_001199534) -418 NM_001199534 55969 Hs.584985 NM_018840 HPRD:12761 C20orf24 RIP5 chromosome 20 open reading frame 24 protein-coding 0.027211 0.535593 -156(GCCGCCCA,+,0.00) 561_WT_peak_5899 chr5 131355992 131356180 + 39 NA Intergenic Intergenic -8325 NM_001205250 23305 Hs.14945 NM_015256 HPRD:09190 ACSL6 ACS2|FACL6|LACS 6|LACS2|LACS5 acyl-CoA synthetase long-chain family member 6 protein-coding 0.021277 0.513228 561_WT_peak_3460 chr18 20514100 20514325 + 39 NA TTS (NR_039895) TTS (NR_039895) 373 NM_203291 5932 Hs.546282 NM_002894 HPRD:04990 RBBP8 COM1|CTIP|JWDS|RIM|SAE2|SCKL2 retinoblastoma binding protein 8 protein-coding 0.040000 0.429204 -98(TCGTGCCT,+,0.00) -25(GGGTTTTG,-,0.00) 561_WT_peak_3498 chr18 46986958 46987150 + 39 NA promoter-TSS (NM_017653) promoter-TSS (NM_017653) 25 NM_017653 54808 Hs.162996 NM_017653 HPRD:08469 DYM DMC|SMC dymeclin protein-coding 0.130208 0.704663 -100(CCGAGAACGCGG,-,0.00) -124(GGCGGCGA,-,0.00) -162(CGGCTCCAGCCC,+,0.00),-65(GCGCGCCAGCCA,+,0.00) -104(GCGACCGA,+,0.00) 8(TCGTGCCT,+,0.00) -37(GCGGCGCGCGCG,+,0.00) -150(GGGCCGCGTC,+,0.00) -147(CCGCGTCG,-,0.00) 561_WT_peak_26 chr1 2478204 2478368 + 39 NA Intergenic CpG -9518 NM_001297605 8764 Hs.512898 NM_003820 HPRD:04122 TNFRSF14 ATAR|CD270|HVEA|HVEM|LIGHTR|TR2 tumor necrosis factor receptor superfamily, member 14 protein-coding 0.085366 0.715152 -10(TGGACGCC,+,0.00) -33(AACCCCGCCC,-,0.00) 561_WT_peak_3612 chr19 9732187 9732364 + 39 NA promoter-TSS (NM_152289) promoter-TSS (NM_152289) 117 NR_122038 284385 Hs.651747 NM_001242812 ENSG00000267106 ZNF561-AS1 C19orf82 ZNF561 antisense RNA 1 (head to head) ncRNA 0.056497 0.601124 -152(CCGGTCGG,-,0.00) -138(AGGGCGGGGA,-,0.00) -146(GGGCTGGAAGGG,-,0.00) -40(GGGAGGCTAAGG,+,0.00) 561_WT_peak_4701 chr20 56008077 56008278 + 39 NA Intergenic Intergenic 41723 NM_001291780 55544 Hs.236361 NM_017495 HPRD:15268 RBM38 HSRNASEB|RNPC1|SEB4B|SEB4D|dJ800J21.2 RNA binding motif protein 38 protein-coding 0.039801 0.584158 -20(GCTTCCGGCTCT,-,0.00) -135(AGCCACTT,-,0.00) -25(CGGCTGCTTCCG,-,0.00) -151(CGGTTTTA,-,0.00) -56(GCTGGGCCAGGG,+,0.00),-35(GCGGGGCCTGCG,+,0.00) -111(AAACCCGCCC,-,0.00) 561_WT_peak_7123 chr8 120886037 120886390 + 39 NA intron (NM_001283012, intron 1 of 6) CpG 318 NM_022783 64798 Hs.112981 NM_022783 HPRD:13137 DEPTOR DEP.6|DEPDC6 DEP domain containing MTOR-interacting protein protein-coding 0.101983 0.689266 -112(GGAGGAGGGCGG,-,0.00) 74(CGCGCACG,+,0.00),76(CGCACGCG,-,0.00) -157(CGGCGGAC,+,0.00) -148(GCGGAGCCAGTG,+,0.00) 561_WT_peak_139 chr1 28415192 28415413 + 39 NA promoter-TSS (NM_001282562) promoter-TSS (NM_001282562) -154 NM_001282560 2140 Hs.185774 NM_001990 HPRD:09042 EYA3 - EYA transcriptional coactivator and phosphatase 3 protein-coding 0.067873 0.594595 -93(CCGCCGGCCCGG,+,0.00) -92(CGCCGGCCCGGC,-,0.00),-91(GCCGGCCCGGCG,+,0.00) -106(GGCTCCGCCC,-,0.00) -73(GCCCATGGCCAC,-,0.00) -121(GCGGGGAAGC,+,0.00) 561_WT_peak_2240 chr14 61220539 61220796 + 39 NA intron (NM_001177963, intron 1 of 6) MLT1F|LTR|ERVL-MaLR 19208 NM_002431 4331 Hs.509523 NM_002431 HPRD:04042 MNAT1 CAP35|MAT1|RNF66|TFB3 MNAT CDK-activating kinase assembly factor 1 protein-coding 0.015564 0.422481 63(CCGCCAAG,-,0.00) 561_WT_peak_7192 chr8 145980936 145981107 + 39 NA promoter-TSS (NM_138367) promoter-TSS (NM_138367) -51 NM_138367 90987 Hs.534516 NM_138367 ENSG00000198169 ZNF251 - zinc finger protein 251 protein-coding 0.116959 0.726744 -107(GGAACCGGAAGC,+,0.00) -107(GGAACCGGAAGC,+,0.00) -91(CGCGGTTCCGCC,-,0.00) -67(GGGCCGCTCT,+,0.00) -153(GCTTCCCCGC,-,0.00) 561_WT_peak_7481 chr9 139001673 139001845 + 39 NA Intergenic Intergenic 8518 NM_001256526 90120 Hs.287411 NM_152833 ENSG00000238227 C9orf69 bA83N9.1 chromosome 9 open reading frame 69 protein-coding 0.087209 0.739884 -159(CCGGGCACGCTG,-,0.00) -24(GCGCGCCAGGCG,+,0.00) -61(GCGGCGGGGC,+,0.00) 561_WT_peak_5186 chr3 101570133 101570212 + 39 NA intron (NM_031419, intron 1 of 11) intron (NM_031419, intron 1 of 11) 1814 NM_031419 64332 Hs.319171 NM_031419 HPRD:09217 NFKBIZ IKBZ|INAP|MAIL nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta protein-coding 0.000000 0.287500 561_WT_peak_3385 chr17 79399265 79399435 + 39 NA intron (NM_001291324, intron 1 of 27) HAL1-2a_MD|LINE|L1 18864 NR_036152 100422944 NR_036152 miRBase:MI0014229 MIR3186 - microRNA 3186 ncRNA 0.000000 0.549708 561_WT_peak_6836 chr7 127983727 127983897 + 39 NA exon (NM_001166135, exon 1 of 15) exon (NM_001166135, exon 1 of 15) 150 NM_001166135 55131 Hs.274263 NM_018077 HPRD:07668 RBM28 - RNA binding motif protein 28 protein-coding 0.082353 0.631579 -91(GCGGGCCGAGGG,+,0.00) 561_WT_peak_3371 chr17 77812252 77812593 + 39 NA intron (NM_003655, intron 2 of 4) intron (NM_003655, intron 2 of 4) 791 NM_003655 8535 Hs.405046 NM_003655 HPRD:04357 CBX4 NBP16|PC2 chromobox homolog 4 protein-coding 0.049853 0.511696 94(CCTCCCTCCGCC,+,0.00) 104(CCGGCCTCCCCG,+,0.00),105(CGGCCTCCCCGG,+,0.00) -15(CGTCGCTT,+,0.00) -108(CAAAAGCG,+,0.00),9(TGGTTTTG,-,0.00) 140(CCTCCGGCTCCT,-,0.00) 117(CTCGGCCCCGCG,-,0.00) 115(GGCTCGGCCC,-,0.00) 561_WT_peak_7197 chr9 178816 178966 + 39 NA exon (NM_018491, exon 1 of 15) exon (NM_018491, exon 1 of 15) 184 NM_001145355 55871 Hs.531330 NM_018491 HPRD:16686 CBWD1 COBP COBW domain containing 1 protein-coding 0.060000 0.543046 -130(GGCGCCGA,-,0.00) 561_WT_peak_5741 chr5 52327648 52327838 + 39 NA intron (NR_073106, intron 2 of 29) intron (NR_073106, intron 2 of 29) 42587 NR_073106 3673 Hs.482077 NM_002203 HPRD:01893 ITGA2 BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) protein-coding 0.005263 0.397906 561_WT_peak_3452 chr18 19180312 19180548 + 39 NA intron (NM_052911, intron 1 of 11) CpG 263 NM_052911 114799 Hs.464733 NM_052911 HPRD:16868 ESCO1 A930014I12Rik|CTF|ECO1|EFO1|ESO1 establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding 0.080508 0.649789 -64(CCTCCCTCCCAG,+,0.00) -97(AAGCGACG,-,0.00) 12(GGAACAGGAAGA,+,0.00) -158(ACCGCCCA,+,0.00),-132(TGCGCGGA,-,0.00) -130(CGCGGACACGCG,+,0.00) 561_WT_peak_7052 chr8 71520366 71520804 + 39 NA promoter-TSS (NR_038881) promoter-TSS (NR_038881) 109 NM_014294 23471 Hs.491988 NM_014294 HPRD:05545 TRAM1 PNAS8|TRAM|TRAMP translocation associated membrane protein 1 protein-coding 0.111872 0.712984 59(GCCGCCGGGCCG,-,0.00),186(GGGACCGGAGGC,+,0.00) 152(CGCGGCCGCC,-,0.00) 194(AGGCCGCT,+,0.00) -28(TCGCCGCC,+,0.00) 204(CCCGCGGC,-,0.00),210(GCCGGGCG,+,0.00) 146(TGGTGCCG,+,0.00),251(TCGCGCCG,+,0.00) -58(CGGTTCTG,-,0.00),263(CGGGTTTG,-,0.00) 210(GCCGGGCGAGCG,+,0.00),254(CGCCGGGCCCGG,-,0.00),255(GCCGGGCCCGGG,+,0.00) -33(CCGACTCG,-,0.00) -101(CGCCATGGTGGG,-,0.00) 4(GCCCCGCTGC,-,0.00) 46(CAGCCAGTACGC,-,0.00),60(CCGCCGGGCCGC,-,0.00),95(CAGCTAGCCCGC,-,0.00) 561_WT_peak_119 chr1 26453044 26453246 + 39 NA Intergenic Intergenic 14877 NM_152835 149420 Hs.468801 NM_152835 HPRD:15110 PDIK1L CLIK1L|STK35L2 PDLIM1 interacting kinase 1 like protein-coding 0.009901 0.399015 561_WT_peak_675 chr1 200875001 200875179 + 39 NA intron (NM_018265, intron 5 of 9) MIR|SINE|MIR 11141 NM_001142569 55765 Hs.518997 NM_018265 HPRD:07712 C1orf106 - chromosome 1 open reading frame 106 protein-coding 0.011236 0.463687 561_WT_peak_5294 chr3 155523754 155523993 + 39 NA intron (NM_173657, intron 1 of 5) CpG 182 NM_173657 285315 Hs.350846 NM_173657 HPRD:08095 C3orf33 AC3-33 chromosome 3 open reading frame 33 protein-coding 0.108787 0.691667 -76(TCCACGCC,+,0.00) -93(CCCCGGCCCCGG,-,0.00) 561_WT_peak_402 chr1 116961084 116961269 + 39 NA promoter-TSS (NR_027645) promoter-TSS (NR_027645) 5 NR_024126 84852 Hs.664752 NM_032766 ENSG00000203865 ATP1A1-AS1 ATP1A1OS|C1orf203 ATP1A1 antisense RNA 1 ncRNA 0.086486 0.677419 -49(GCTTCCGGGGAG,-,0.00) -151(CACTCGGCCC,-,0.00) 561_WT_peak_1300 chr11 59534858 59534946 + 39 NA intron (NM_001178040, intron 1 of 9) intron (NM_001178040, intron 1 of 9) 12370 NM_004177 6809 Hs.180711 NM_004177 HPRD:15985 STX3 STX3A syntaxin 3 protein-coding 0.000000 0.415730 561_WT_peak_7002 chr8 42911255 42911577 + 39 NA promoter-TSS (NM_002027) promoter-TSS (NM_002027) -26 NR_033698 2339 Hs.370312 NM_002027 HPRD:00607 FNTA FPTA|PGGT1A|PTAR2 farnesyltransferase, CAAX box, alpha protein-coding 0.096273 0.727554 117(CCGGGCAGCCGG,-,0.00) 6(GGCCTCGA,-,0.00) 57(CGGACCGA,+,0.00) 134(CCCCCGCC,-,0.00) -111(CGGCGGAC,+,0.00) -6(AAAACAGGAAGT,+,0.00) -125(GCCGCGCA,+,0.00),98(GCTGCGCA,+,0.00) 30(GCGGGGCCTCCG,+,0.00) -50(CCGCCAAG,-,0.00) 53(GCTGCGGACC,+,0.00) -58(CCGGCAGCCCGC,-,0.00) 561_WT_peak_381 chr1 112019635 112019892 + 38 NA intron (NM_001300835, intron 3 of 4) intron (NM_001300835, intron 3 of 4) 3272 NM_001300835 128346 Hs.288010 NM_174896 HPRD:14495 C1orf162 - chromosome 1 open reading frame 162 protein-coding 0.000000 0.457364 561_WT_peak_6807 chr7 105662978 105663177 + 38 NA intron (NM_001301161, intron 13 of 17) intron (NM_001301161, intron 13 of 17) 59420 NM_001301161 222256 Hs.150120 NM_152750 HPRD:08042 CDHR3 CDH28 cadherin-related family member 3 protein-coding 0.005025 0.480000 6(AGAGACTT,-,0.00) -57(CATAACCG,+,0.00) 561_WT_peak_2551 chr15 75092411 75092684 + 38 NA intron (NM_004383, intron 5 of 12) intron (NM_004383, intron 5 of 12) -11449 NR_039738 100616183 NR_039738 miRBase:MI0016879 MIR4513 - microRNA 4513 ncRNA 0.014652 0.624088 90(CTCTGCCGCC,-,0.00) 75(CTAGGCGG,+,0.00) 561_WT_peak_229 chr1 47800081 47800271 + 38 NA intron (NM_001136140, intron 1 of 4) CpG 707 NR_046395 51727 Hs.731647 NM_016308 HPRD:18258 CMPK1 CK|CMK|CMPK|UMK|UMP-CMPK|UMPK cytidine monophosphate (UMP-CMP) kinase 1, cytosolic protein-coding 0.068421 0.607330 -13(CCGCGCCTTCCC,-,0.00) -76(CGGATTTG,-,0.00) -132(AGCGCGCA,+,0.00) 561_WT_peak_4105 chr2 64954469 64954499 + 38 NA Intergenic Intergenic -73438 NM_014755 9792 Hs.591569 NM_014755 HPRD:18040 SERTAD2 Sei-2|TRIP-Br2 SERTA domain containing 2 protein-coding 0.000000 0.258065 561_WT_peak_3582 chr19 3762436 3762628 + 38 NA promoter-TSS (NM_172251) promoter-TSS (NM_172251) -133 NM_172251 116541 Hs.356578 NM_172251 HPRD:14772 MRPL54 L54mt|MRP-L54 mitochondrial ribosomal protein L54 protein-coding 0.020833 0.424870 -9(AGACACCT,-,0.00) 561_WT_peak_1024 chr10 70360239 70360429 + 38 NA intron (NM_030625, intron 2 of 11) intron (NM_030625, intron 2 of 11) 40217 NM_030625 80312 Hs.567594 NM_030625 HPRD:09694 TET1 CXXC6|LCX|bA119F7.1 tet methylcytosine dioxygenase 1 protein-coding 0.005263 0.486911 -42(GGCCAGGGCTGC,-,0.00) 561_WT_peak_2250 chr14 62127560 62127683 + 38 NA Intergenic Intergenic -34498 NM_181054 3091 Hs.597216 NM_001530 HPRD:04517 HIF1A HIF-1A|HIF-1alpha|HIF1|HIF1-ALPHA|MOP1|PASD8|bHLHe78 hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) protein-coding 0.000000 0.403226 561_WT_peak_4232 chr2 99388247 99388650 + 38 NA Intergenic Intergenic -40859 NM_012214 11320 Hs.177576 NM_012214 HPRD:06860 MGAT4A GNT-IV|GNT-IVA|GnT-4a mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A protein-coding 0.022333 0.512376 -60(CACACAGGAAGC,+,0.00),55(GACTCCTGTTTC,-,0.00) 561_WT_peak_6301 chr6 34724589 34724819 + 38 NA promoter-TSS (NR_029472) promoter-TSS (NR_029472) -167 NR_029472 6631 Hs.1063 NM_003093 SNRPC U1C|Yhc1 small nuclear ribonucleoprotein polypeptide C protein-coding 0.069565 0.558442 -42(CTCGGCCTCC,-,0.00) -85(GCCGGGCG,+,0.00) -4(ACCGCGCC,+,0.00) -46(CCGCCTCG,-,0.00) 561_WT_peak_6542 chr6 159464634 159464682 + 38 NA exon (NM_054114, exon 4 of 10) exon (NM_054114, exon 4 of 10) -1273 NM_001278733 117289 Hs.529984 NM_054114 HPRD:18143 TAGAP ARHGAP47|IDDM21|TAGAP1 T-cell activation RhoGTPase activating protein protein-coding 0.000000 0.428571 561_WT_peak_1412 chr11 74303505 74303900 + 38 NA promoter-TSS (NR_046410) promoter-TSS (NR_046410) 52 NR_046410 10714 Hs.82502 NM_006591 HPRD:11446 POLD3 P66|P68|PPP1R128 polymerase (DNA-directed), delta 3, accessory subunit protein-coding 0.086076 0.641414 -73(CGGGGAAA,+,0.00) 31(CACCATGGCGGA,-,0.00) 561_WT_peak_1106 chr10 97802890 97803071 + 38 NA promoter-TSS (NM_001134376) promoter-TSS (NM_001134376) -179 NM_001134375 54619 Hs.596479 NM_019084 HPRD:07710 CCNJ bA690P14.1 cyclin J protein-coding 0.071823 0.554945 -115(GGCGTCGG,-,0.00),-93(GGCATCGA,-,0.00) -113(CGTCGGAA,+,0.00) 561_WT_peak_5287 chr3 150421813 150422089 + 38 NA promoter-TSS (NM_152394) promoter-TSS (NM_152394) 189 NR_121674 101928085 Hs.561114 NR_121674 ERICH6-AS1 - ERICH6 antisense RNA 1 ncRNA 0.047101 0.523466 28(AAGTGGCT,+,0.00) -155(CGGCAGGA,-,0.00) -155(CGGCAGGAGCTG,+,0.00) 38(TAGCGACG,-,0.00) 41(CGACGGAC,+,0.00) -125(GGGTGCCGAGGG,+,0.00) 561_WT_peak_114 chr1 25566430 25566600 + 38 NA Intergenic CpG 7470 NM_020317 57035 Hs.259412 NM_020317 HPRD:14835 RSRP1 C1orf63|DJ465N24.2.1|NPD014 arginine/serine-rich protein 1 protein-coding 0.052941 0.631579 -9(AGACGCTT,-,0.00) -129(TAGGGACG,-,0.00) 561_WT_peak_2675 chr16 3451399 3451684 + 38 NA promoter-TSS (NM_017810) promoter-TSS (NM_017810) 351 NM_001032292 7727 Hs.155204 NM_003450 HPRD:04876 ZNF174 ZSCAN8 zinc finger protein 174 protein-coding 0.094737 0.667832 -94(AGCCGCTT,-,0.00) -48(CGGCTGGCGCTG,-,0.00) 7(CCGGTCGG,-,0.00) -152(GCCGCGGG,+,0.00),-52(CCCCCGGC,-,0.00) -149(GCGGGGCCGCCC,+,0.00) -150(CGCGGGGCCGCC,+,0.00) -144(GCCGCCCTGGAG,+,0.00) -152(GCCGCGGGGC,+,0.00) 561_WT_peak_2301 chr14 76448584 76448945 + 38 NA promoter-TSS (NM_003239) promoter-TSS (NM_003239) -399 NM_003239 7043 Hs.592317 NM_003239 TGFB3 ARVD|ARVD1|RNHF|TGF-beta3 transforming growth factor, beta 3 protein-coding 0.110803 0.720994 -93(CGTCCGCG,-,0.00) -90(CCGCGGCCCGCG,+,0.00) 18(GGCCATGCCAGC,-,0.00) 80(GCTCCGCGGC,-,0.00) 561_WT_peak_888 chr10 12490754 12490924 + 38 NA intron (NM_020397, intron 1 of 9) intron (NM_020397, intron 1 of 9) 99256 NM_153498 57118 Hs.659517 NM_020397 HPRD:06409 CAMK1D CKLiK|CaM-K1|CaMKID calcium/calmodulin-dependent protein kinase ID protein-coding 0.047059 0.491228 -80(CACGTACG,+,0.00) -32(TGGTTTTG,-,0.00) 561_WT_peak_4921 chr22 39898336 39898526 + 38 NA 5' UTR (NM_019008, exon 1 of 6) 5' UTR (NM_019008, exon 1 of 6) 147 NM_019008 54471 Hs.728085 NM_019008 HPRD:13371 MIEF1 HSU79252|MID51|SMCR7L|dJ1104E15.3 mitochondrial elongation factor 1 protein-coding 0.100000 0.706806 -73(CGCGCACG,+,0.00) -75(AGCGCGCA,+,0.00),-23(TGGGCGGC,-,0.00) 561_WT_peak_843 chr10 3110530 3110734 + 38 NA promoter-TSS (NM_001242339) promoter-TSS (NM_001242339) -187 NM_001242339 5214 Hs.26010 NM_002627 HPRD:01384 PFKP ATP-PFK|PFK-C|PFK-P|PFKF phosphofructokinase, platelet protein-coding 0.107843 0.653659 -84(CCTTCCGGCTCG,-,0.00) -69(CAAAAACG,+,0.00) -11(GGATCAGGAAGC,+,0.00) 18(AGCGGCGCCGCG,+,0.00),18(AGCGGCGCCGCG,-,0.00) 561_WT_peak_503 chr1 149871594 149871854 + 38 NA exon (NM_016074, exon 2 of 2) exon (NM_016074, exon 2 of 2) 569 NM_016074 51027 Hs.13880 NM_016074 HPRD:13036 BOLA1 - bolA family member 1 protein-coding 0.088462 0.666667 -60(TCGGTCCG,-,0.00) -137(TGGGCGGC,-,0.00) -69(CCGGGGCCATCG,+,0.00) -104(TGGCCGCGTT,+,0.00) 4(GCTTCGCAAC,-,0.00) 561_WT_peak_2665 chr16 3105347 3105411 + 38 NA intron (NR_123723, intron 3 of 4) intron (NR_123723, intron 3 of 4) 3992 NR_123723 100507419 Hs.312579 NR_123723 LOC100507419 - uncharacterized LOC100507419 ncRNA 0.015625 0.430769 561_WT_peak_3734 chr19 36390678 36390850 + 38 NA intron (NM_139239, intron 1 of 11) CpG 788 NM_139239 84807 Hs.466531 NM_139239 HPRD:18140 NFKBID IkappaBNS|TA-NFKBH nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta protein-coding 0.122093 0.699422 -164(TGGCTCGGAAAC,+,0.00) -36(TCGTGGCG,+,0.00) -17(CCCGCGCA,+,0.00) -53(GCGGGGCGCGCG,+,0.00) -147(CGACGCGG,+,0.00),-57(CGAGGCGG,+,0.00) -133(GACGCCACGGCG,+,0.00) 561_WT_peak_5893 chr5 130588798 130588930 + 38 NA Intergenic Intergenic -10838 NM_001038702 56990 Hs.508829 NM_020240 HPRD:16695 CDC42SE2 SPEC2 CDC42 small effector 2 protein-coding 0.015152 0.458647 561_WT_peak_7610 chrX 128911357 128911527 + 38 NA Intergenic Intergenic -2450 NM_018990 54440 Hs.61469 NM_018990 HPRD:02342 SASH3 753P9|CXorf9|HACS2|SH3D6C|SLY SAM and SH3 domain containing 3 protein-coding 0.082353 0.660819 -56(AGGCCCGGAAGA,+,0.00) -29(CCTCCCTCACGG,+,0.00) -35(CTGCTTCCTCCC,-,0.00) -109(CAAACAGGAAGC,+,0.00) -63(GCTGCGCA,+,0.00) -85(CGAGGCGG,+,0.00) -89(CCTGCGAGGC,+,0.00) 561_WT_peak_125 chr1 27019544 27019846 + 38 NA Intergenic Intergenic -2827 NM_006015 8289 Hs.468972 NM_006015 HPRD:04319 ARID1A B120|BAF250|BAF250a|BM029|C1orf4|ELD|MRD14|OSA1|P270|SMARCF1|hELD|hOSA1 AT rich interactive domain 1A (SWI-like) protein-coding 0.066225 0.574257 -79(GCGGTCGG,-,0.00) 94(GCTGCCTGGGTG,+,0.00) 561_WT_peak_1347 chr11 65188712 65188751 + 38 NA Intergenic Intergenic -1538 NR_028272 283131 Hs.523789 NR_002802 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA 0.051282 0.650000 -147(GGAGGAGGCCGC,-,0.00) 561_WT_peak_4843 chr22 21213210 21213445 + 38 NA promoter-TSS (NM_058004) promoter-TSS (NM_058004) 35 NM_004782 9342 Hs.108002 NM_004782 HPRD:11968 SNAP29 CEDNIK|SNAP-29 synaptosomal-associated protein, 29kDa protein-coding 0.157447 0.733051 56(TCGACGAC,+,0.00) 1(CAGACCGA,+,0.00) -114(AGGGCGGGGC,-,0.00) 18(CGGCACCA,-,0.00) 54(GTTCGACG,-,0.00) 11(GCCGCGCC,+,0.00) -111(GCGGGGCCACCT,+,0.00),-64(GCGGGGTCGGCG,+,0.00),-51(GCGGGGCGAGGC,+,0.00) 561_WT_peak_1470 chr11 107436344 107436600 + 38 NA promoter-TSS (NM_138775) promoter-TSS (NM_138775) -11 NM_001301010 91801 Hs.503763 NM_138775 HPRD:14287 ALKBH8 ABH8 alkB, alkylation repair homolog 8 (E. coli) protein-coding 0.054688 0.556420 46(AAGTGTCT,+,0.00) 6(TCTTCGCCTCCC,-,0.00) -70(GGCGCGGC,-,0.00) 561_WT_peak_7543 chrX 48815515 48815658 + 38 NA promoter-TSS (NM_001136158) promoter-TSS (NM_001136158) 62 NM_001136159 55593 Hs.496098 NM_017602 HPRD:06488 OTUD5 DUBA OTU deubiquitinase 5 protein-coding 0.062937 0.583333 -144(CACGTACG,+,0.00) -148(GTCCCACG,-,0.00) 561_WT_peak_5133 chr3 57541731 57541982 + 38 NA promoter-TSS (NM_177966) promoter-TSS (NM_177966) -125 NM_177966 201626 Hs.572993 NM_177966 PDE12 2'-PDE phosphodiesterase 12 protein-coding 0.055777 0.488095 -75(CAAAACCG,+,0.00) 62(CGAGTCGG,+,0.00) 561_WT_peak_6025 chr5 174944820 174945082 + 38 NA intron (NM_022754, intron 8 of 10) intron (NM_022754, intron 8 of 10) 39437 NM_022754 94081 Hs.369440 NM_022754 HPRD:18044 SFXN1 - sideroflexin 1 protein-coding 0.019084 0.517110 -121(CCGCTTGTTCCC,-,0.00) 561_WT_peak_6140 chr6 26043662 26043891 + 38 NA exon (NM_021062, exon 1 of 1) exon (NM_021062, exon 1 of 1) 109 NM_021062 3018 Hs.553494 NM_021062 HPRD:07536 HIST1H2BB H2B.1|H2B/f|H2BFF histone cluster 1, H2bb protein-coding 0.048035 0.513043 -35(CGCTTACG,+,0.00) 561_WT_peak_3639 chr19 12903784 12903954 + 38 NA 3' UTR (NM_002229, exon 1 of 1) 3' UTR (NM_002229, exon 1 of 1) 1559 NM_002229 3726 Hs.25292 NM_002229 HPRD:01303 JUNB AP-1 jun B proto-oncogene protein-coding 0.058824 0.497076 -49(GGGAAGAGGGGG,+,0.00) -25(AGCTGGCCCCGC,-,0.00) -32(GCGGCGGAGC,+,0.00),-20(GCCCCGCCGC,-,0.00) 561_WT_peak_4797 chr21 38936611 38936851 + 38 NA Intergenic Intergenic 144129 NM_001396 1859 Hs.368240 NM_001396 HPRD:09018 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A protein-coding 0.029167 0.543568 561_WT_peak_2299 chr14 75963548 75963676 + 38 NA Intergenic Intergenic -25172 NM_006399 10538 Hs.509964 NM_006399 HPRD:09820 BATF B-ATF|BATF1|SFA-2|SFA2 basic leucine zipper transcription factor, ATF-like protein-coding 0.007812 0.596899 -66(AGGCCTCT,+,0.00) 561_WT_peak_3675 chr19 17416178 17416553 + 38 NA promoter-TSS (NM_023937) promoter-TSS (NM_023937) -112 NM_023937 64981 Hs.515242 NM_023937 HPRD:14754 MRPL34 L34mt mitochondrial ribosomal protein L34 protein-coding 0.069333 0.659574 -14(AGCCGCTT,-,0.00) 105(CGCACGCG,-,0.00) 14(CGCCCGGC,-,0.00) 561_WT_peak_5928 chr5 134209763 134209821 + 37 NA 5' UTR (NM_024715, exon 1 of 5) 5' UTR (NM_024715, exon 1 of 5) 332 NM_024715 79770 Hs.741304 NM_024715 HPRD:08658 TXNDC15 C5orf14|UNQ335 thioredoxin domain containing 15 protein-coding 0.051724 0.593220 561_WT_peak_600 chr1 165738080 165738285 + 37 NA promoter-TSS (NM_001256164) promoter-TSS (NM_001256164) 16 NR_125374 100147773 Hs.633824 NR_125374 LOC100147773 - uncharacterized LOC100147773 ncRNA 0.068293 0.563107 -115(GCTTCCGGGGCA,-,0.00) -31(TGGAGCTGAAGG,+,0.00) 561_WT_peak_4277 chr2 120124114 120124335 + 37 NA promoter-TSS (NM_001282636) promoter-TSS (NM_001282636) 34 NM_001017927 130355 Hs.99488 NM_001017927 HPRD:18547 C2orf76 AIM29 chromosome 2 open reading frame 76 protein-coding 0.063348 0.599099 -3(GCGTGCCG,+,0.00) -156(AGGGAGGAGCGG,+,0.00),-14(CCCCTTCCCCCG,-,0.00) 561_WT_peak_4251 chr2 111506142 111506331 + 37 NA intron (NM_001142807, intron 1 of 17) intron (NM_001142807, intron 1 of 17) 16086 NM_001142807 55289 Hs.253320 NM_018308 HPRD:12418 ACOXL - acyl-CoA oxidase-like protein-coding 0.010582 0.505263 -67(AGGTGGCT,+,0.00) 561_WT_peak_7293 chr9 73027089 73027410 + 37 NA intron (NM_001206, intron 1 of 1) intron (NM_001206, intron 1 of 1) 2324 NM_001206 687 Hs.150557 NM_001206 HPRD:04211 KLF9 BTEB|BTEB1 Kruppel-like factor 9 protein-coding 0.028037 0.437888 112(AACCACTT,-,0.00) 129(CCGACAAG,-,0.00) 561_WT_peak_1827 chr12 101801723 101801936 + 37 NA promoter-TSS (NM_001301068) promoter-TSS (NM_001301068) -231 NM_001301068 400 Hs.372616 NM_001177 HPRD:04574 ARL1 ARFL1 ADP-ribosylation factor-like 1 protein-coding 0.079812 0.537383 -83(GGCCTCGA,-,0.00) -6(CGGGGCCAGCCC,+,0.00) -71(TCGTCCCG,+,0.00) -7(GCGGGGCCAGCC,+,0.00) -90(CGAGTCGG,+,0.00) 561_WT_peak_3129 chr17 33905699 33905905 + 37 NA promoter-TSS (NM_000286) promoter-TSS (NM_000286) -146 NM_000286 5193 Hs.591190 NM_000286 HPRD:03455 PEX12 PAF-3|PBD3A peroxisomal biogenesis factor 12 protein-coding 0.058252 0.594203 -109(TGGTTTTG,-,0.00) -154(GCTTCCGCTCCC,-,0.00) 5(ACCGCGCA,+,0.00) -147(CTCCCGCCCCGC,-,0.00) 561_WT_peak_282 chr1 67772990 67773247 + 37 NA promoter-TSS (NM_001258215) promoter-TSS (NM_001258215) 71 NM_001258215 3595 Hs.479347 NM_001559 HPRD:03383 IL12RB2 - interleukin 12 receptor, beta 2 protein-coding 0.050584 0.527132 -44(CGTCTCTA,+,0.00) -114(TGGGCGGT,-,0.00) 561_WT_peak_1185 chr11 1874169 1874349 + 37 NA promoter-TSS (NM_002339) promoter-TSS (NM_002339) 59 NM_002339 4046 Hs.56729 NM_002339 HPRD:01083 LSP1 WP34|pp52 lymphocyte-specific protein 1 protein-coding 0.027778 0.574586 -47(GAAGCCGCCC,-,0.00) 561_WT_peak_6484 chr6 135945706 135945873 + 37 NA intron (NR_026805, intron 1 of 3) intron (NR_026805, intron 1 of 3) 126850 NR_026805 100131814 Hs.734007 NR_026805 ENSG00000231028 LINC00271 C6orf217|NCRNA00271 long intergenic non-protein coding RNA 271 ncRNA 0.005988 0.375000 -8(CTTTCCTGTTTC,-,0.00) 561_WT_peak_5771 chr5 64399062 64399336 + 37 NA Intergenic CpG 334454 NM_001297644 10283 Hs.371372 NM_005869 HPRD:11541 CWC27 NY-CO-10|SDCCAG10 CWC27 spliceosome-associated protein homolog (S. cerevisiae) protein-coding 0.062044 0.636364 -144(GACGGCCGAG,+,0.00) -103(TCGTGCCC,+,0.00) -37(CTCAGGCCCCGC,-,0.00) -13(GCCGCCCTGGGA,+,0.00) -32(GCCCCGCCGC,-,0.00) 561_WT_peak_3532 chr18 74766871 74767369 + 37 NA intron (NM_001025101, intron 3 of 8) intron (NM_001025101, intron 3 of 8) -38065 NM_001025092 4155 Hs.551713 NM_002385 HPRD:01158 MBP - myelin basic protein protein-coding 0.018072 0.537074 107(AGGCGGCT,+,0.00),225(AAGTGGCT,+,0.00) 177(AGGAAGGAGCTG,+,0.00) 110(CGGCTTTG,-,0.00) 109(GCGGCTTTGCTG,+,0.00) 561_WT_peak_5535 chr4 84405823 84406120 + 37 NA intron (NM_139076, intron 1 of 8) CpG 319 NM_139076 84142 Hs.334772 NM_139076 HPRD:08584 FAM175A ABRA1|CCDC98 family with sequence similarity 175, member A protein-coding 0.094276 0.664430 -121(GGCGCCGA,-,0.00),49(GGCGTCGG,-,0.00),118(GCGACGCC,+,0.00) -87(TGGGTCGG,-,0.00) -23(GGGCACGA,-,0.00) 122(CGCCGGAC,+,0.00) 41(GGCGCGGC,-,0.00) 90(GGCAGGCCGCGC,-,0.00) 16(GGCAGAGCCGCG,+,0.00) 88(GAGGCAGGCCGC,-,0.00) 561_WT_peak_5523 chr4 83821958 83822128 + 37 NA promoter-TSS (NR_034076) promoter-TSS (NR_034076) 26 NR_034077 100499177 Hs.728916 NR_034075 ENSG00000251022 THAP9-AS1 - THAP9 antisense RNA 1 ncRNA 0.111765 0.736842 -113(CCGGGAGCGCGG,-,0.00) -68(TCGAAGCC,+,0.00) -48(GCGGGGCCCGGC,+,0.00),-16(GCGGGGCCGGGC,+,0.00) -153(GCTCCGCAGT,-,0.00) -46(GGGGCCCGGCGG,+,0.00),-13(GGGCCGGGCCGC,-,0.00) 561_WT_peak_896 chr10 17045207 17045383 + 37 NA intron (NM_001081, intron 28 of 66) intron (NM_001081, intron 28 of 66) 126521 NM_001081 8029 Hs.166206 NM_001081 HPRD:04296 CUBN IFCR|MGA1|gp280 cubilin (intrinsic factor-cobalamin receptor) protein-coding 0.022727 0.491525 -3(GCCCAGCCCT,+,0.00) 561_WT_peak_5522 chr4 83812194 83812648 + 37 NA promoter-TSS (NM_016211) promoter-TSS (NM_016211) -2 NM_014933 22872 Hs.370024 NM_014933 HPRD:15314 SEC31A ABP125|ABP130|HSPC334|SEC31L1 SEC31 homolog A (S. cerevisiae) protein-coding 0.112335 0.679121 45(AGCGACAT,-,0.00) -42(CCTCCTCCCCGG,+,0.00) -53(TCGCCGCC,+,0.00) -72(CGTCGGAC,+,0.00) 54(TTTCCCCG,-,0.00),231(TGGGTAAA,+,0.00) -107(CCTTCGGCAGCC,-,0.00) 79(CCGCCACG,-,0.00) -34(CCGGCCAGGGCC,+,0.00),275(ACCGCCGTGGCC,+,0.00) 561_WT_peak_5987 chr5 150473700 150473853 + 37 NA Intergenic Intergenic -6555 NM_001252390 10318 Hs.355141 NM_006058 HPRD:09216 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding 0.032680 0.551948 -130(AGGAAGGAGCAG,+,0.00) -62(TTTCCCCG,-,0.00) 561_WT_peak_1208 chr11 10772733 10772977 + 37 NA promoter-TSS (NM_014633) promoter-TSS (NM_014633) 44 NM_014633 9646 Hs.725151 NM_014633 HPRD:06717 CTR9 SH2BP1|TSBP|p150|p150TSP CTR9, Paf1/RNA polymerase II complex component protein-coding 0.110656 0.681633 -97(AAGCGGCT,+,0.00),35(AGACACTT,-,0.00) -58(GCCGCGGG,+,0.00) -122(GTCCGCCG,-,0.00) 27(GCGGGGCGAGAC,+,0.00) -64(AGCGGCGCCGCG,+,0.00),-64(AGCGGCGCCGCG,-,0.00),18(TGCGGAGCGGCG,+,0.00) -145(GGGCGGGGTC,+,0.00) -58(GCCGCGGGGC,+,0.00),16(GCTGCGGAGC,+,0.00),24(GCGGCGGGGC,+,0.00) 561_WT_peak_32 chr1 6453853 6454042 + 37 NA promoter-TSS (NM_007274) promoter-TSS (NM_007274) -121 NM_007274 11332 Hs.126137 NM_007274 HPRD:12517 ACOT7 ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH acyl-CoA thioesterase 7 protein-coding 0.100529 0.694737 -70(CCCCCGCC,-,0.00) -50(CGGCACCA,-,0.00) -114(CGGAAGGCGCGG,+,0.00) -152(GCCGCGCC,+,0.00),-137(TGGGCGGC,-,0.00),-109(GGCGCGGC,-,0.00) -108(GCGCGGCCCGGG,+,0.00) -109(GGCGCGGCCC,-,0.00),-17(AGATCGGCCC,-,0.00) 561_WT_peak_2101 chr13 111805606 111805733 + 36 NA promoter-TSS (NM_003899) promoter-TSS (NM_003899) 255 NR_120398 101060553 Hs.662213 NR_120398 LOC101060553 - uncharacterized LOC101060553 ncRNA 0.078740 0.726562 -92(GGGCCGAGCGGG,-,0.00) -68(GCGGGGCCAGGC,+,0.00) 561_WT_peak_4553 chr20 4666792 4666912 + 36 NA promoter-TSS (NM_001080123) promoter-TSS (NM_001080123) 55 NM_000311 5621 Hs.472010 NM_000311 HPRD:01453 PRNP ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30 prion protein protein-coding 0.058333 0.462810 561_WT_peak_6500 chr6 143832633 143832841 + 36 NA exon (NM_032020, exon 1 of 7) exon (NM_032020, exon 1 of 7) 283 NM_032020 2519 Hs.17680 NM_032020 HPRD:00649 FUCA2 dJ20N2.5 fucosidase, alpha-L- 2, plasma protein-coding 0.105769 0.732057 -20(GGCGCAGGCCGG,-,0.00) -154(GGCGTCCA,-,0.00),-133(GGGGTCGA,-,0.00) 10(CCCGCGGC,-,0.00) -105(GGGCACGGCGGC,-,0.00) 561_WT_peak_7426 chr9 128003992 128004181 + 36 NA promoter-TSS (NM_005347) promoter-TSS (NM_005347) -420 NM_005347 3309 Hs.743241 NM_005347 HPRD:00682 HSPA5 BIP|GRP78|HEL-S-89n|MIF2 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) protein-coding 0.031746 0.552632 -90(GAAGCGGGAAGC,+,0.00) 561_WT_peak_7467 chr9 134955149 134955349 + 36 NA promoter-TSS (NM_004269) promoter-TSS (NM_004269) 25 NM_001253882 9442 Hs.374262 NM_004269 HPRD:05438 MED27 CRAP34|CRSP34|CRSP8|TRAP37 mediator complex subunit 27 protein-coding 0.085000 0.592040 -57(CAAAGCCG,+,0.00) 561_WT_peak_3176 chr17 40021142 40021334 + 36 NA exon (NM_018143, exon 1 of 2) exon (NM_018143, exon 1 of 2) 391 NM_018143 55175 Hs.592134 NM_018143 HPRD:13924 KLHL11 - kelch-like family member 11 protein-coding 0.114583 0.683938 561_WT_peak_2550 chr15 74392406 74392578 + 36 NA Intergenic CpG -17601 NM_001038640 342096 Hs.546408 NM_001038640 ENSG00000159289 GOLGA6A GLP|GOLGA6 golgin A6 family, member A protein-coding 0.075581 0.658960 561_WT_peak_5492 chr4 57301353 57301719 + 36 NA promoter-TSS (NM_006452) promoter-TSS (NM_006452) 266 NM_002703 5471 Hs.331420 NM_002703 HPRD:01402 PPAT ATASE|GPAT|PRAT phosphoribosyl pyrophosphate amidotransferase protein-coding 0.090164 0.670300 -57(AAGCGGCT,+,0.00) -103(CGGTCCTCCCGG,+,0.00) -142(TCGACGCC,+,0.00),128(TCGCCGCC,+,0.00) -117(TAGGTCGG,-,0.00) -29(CCCCCGCC,-,0.00) -56(AGCGGCTCCGAG,-,0.00) 193(AGCTCGGCCC,-,0.00) 561_WT_peak_879 chr10 8446767 8446825 + 36 NA Intergenic Intergenic -136528 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA 0.000000 0.338983 561_WT_peak_6046 chr5 179125974 179126293 + 36 NA intron (NM_001746, intron 1 of 14) CpG 203 NM_001746 821 Hs.567968 NM_001746 HPRD:00252 CANX CNX|IP90|P90 calnexin protein-coding 0.112853 0.743750 -159(AGGCCTCT,+,0.00) 70(GGGCTGGCTCTT,-,0.00) -134(ACGGTCGG,-,0.00) -143(CGGCACGT,-,0.00),-130(TCGGGCCG,+,0.00) -37(GAGGTGAGAGGG,-,0.00),14(GGGCTGGGAGCG,-,0.00) 97(GGCCGACG,-,0.00) -56(CGCGGTCCCCGG,-,0.00),47(GCGTGGCCGGCG,+,0.00) 561_WT_peak_1856 chr12 111051690 111051860 + 36 NA promoter-TSS (NM_001173975) promoter-TSS (NM_001173975) -57 NM_001173976 79600 Hs.211511 NM_024549 HPRD:08636 TCTN1 JBTS13|TECT1 tectonic family member 1 protein-coding 0.100000 0.684211 -44(CCGCCCTCCGGC,+,0.00) -128(TTTACACG,-,0.00) -52(CCCAGGCGCCGC,-,0.00) -48(GGCGCCGCCC,-,0.00),-24(GGATCCGCCC,-,0.00) 561_WT_peak_260 chr1 61797949 61798137 + 36 NA intron (NM_001145511, intron 3 of 10) intron (NM_001145511, intron 3 of 10) -78853 NR_104180 645030 Hs.632410 NR_104180 NFIA-AS1 - NFIA antisense RNA 1 ncRNA 0.000000 0.370370 561_WT_peak_2969 chr17 1419608 1419781 + 36 NA promoter-TSS (NR_028514) promoter-TSS (NR_028514) 488 NM_016532 51763 Hs.632238 NM_016532 HPRD:08489 INPP5K PPS|SKIP inositol polyphosphate-5-phosphatase K protein-coding 0.057803 0.689655 -45(CTCTGCCGCC,-,0.00) -72(GGCGCCGA,-,0.00) -95(CACCCCCAGCCC,+,0.00) -41(GCCGCCAGGGTG,+,0.00) 561_WT_peak_7169 chr8 135844708 135844879 + 36 NA Intergenic CpG -17385 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA 0.105263 0.697674 561_WT_peak_1153 chr10 119135065 119135392 + 36 NA promoter-TSS (NM_173791) promoter-TSS (NM_173791) -291 NM_173791 118987 Hs.501149 NM_173791 PDZD8 PDZK8|bA129M16.2 PDZ domain containing 8 protein-coding 0.131498 0.710366 -159(CCGGGCACGCGG,-,0.00),-13(CTGGGGACGCGG,-,0.00) 121(GGCGTCGC,-,0.00) -152(CGCGGACG,+,0.00),-150(CGGACGCG,-,0.00) -36(GCGGTCGG,-,0.00) -81(CCCGCGGC,-,0.00) 123(CGTCGCTC,+,0.00) 15(GTCCGGCG,-,0.00) 94(CGCAGTCCCCGC,-,0.00) 561_WT_peak_2072 chr13 77565690 77565984 + 36 NA promoter-TSS (NM_006493) promoter-TSS (NM_006493) -222 NM_006493 1203 Hs.30213 NM_006493 CLN5 NCL ceroid-lipofuscinosis, neuronal 5 protein-coding 0.030612 0.525424 -47(CACCCCCAGCCC,+,0.00) 50(CGGTGTTG,-,0.00),82(TGGTTTTG,-,0.00) 38(GGGGTAAA,+,0.00) 561_WT_peak_1213 chr11 13484692 13484862 + 36 NA promoter-TSS (NM_001297741) promoter-TSS (NM_001297741) 67 NM_032320 84280 Hs.332382 NM_032320 HPRD:17045 BTBD10 GMRP-1|GMRP1 BTB (POZ) domain containing 10 protein-coding 0.076471 0.678363 -120(AGGTGGCT,+,0.00),-96(AGGCGGCT,+,0.00) -95(GGCGGCTGCGCG,-,0.00),-82(AGCGGAGCCGCC,+,0.00) -52(GCTCCTCAGC,-,0.00) 561_WT_peak_7321 chr9 86571103 86571524 + 36 NA exon (NM_032307, exon 1 of 4) exon (NM_032307, exon 1 of 4) 350 NM_032307 84267 Hs.208914 NM_032307 HPRD:12969 C9orf64 - chromosome 9 open reading frame 64 protein-coding 0.071259 0.606635 -102(TCGTCCTGCTCC,+,0.00) -34(GTCGGCCGCC,-,0.00) 63(CGTACGCC,-,0.00) -92(CCGACCAA,+,0.00) -35(CGTCGGCC,+,0.00) 193(CGGGTCAA,+,0.00) 20(CTCTGGCCCCGC,-,0.00) 188(CTAGGCGG,+,0.00) -30(GCCGCCCTGGGG,+,0.00),30(GCCGCCTTGGCC,+,0.00) 25(GCCCCGCCGC,-,0.00) 561_WT_peak_7098 chr8 103580214 103580478 + 36 NA Intergenic Intergenic 16498 NM_024410 4956 Hs.159274 NM_024410 HPRD:01687 ODF1 CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF outer dense fiber of sperm tails 1 protein-coding 0.022727 0.490566 561_WT_peak_1989 chr13 33721140 33721329 + 36 NA intron (NM_178006, intron 3 of 13) L1MC1|LINE|L1 38982 NM_001243466 90627 Hs.156551 NM_052851 HPRD:11607 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR-related lipid transfer (START) domain containing 13 protein-coding 0.005291 0.410526 561_WT_peak_5602 chr4 140477993 140478166 + 36 NA promoter-TSS (NM_030648) promoter-TSS (NM_030648) -502 NM_030648 80854 Hs.480792 NM_030648 HPRD:16226 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing (lysine methyltransferase) 7 protein-coding 0.104046 0.683908 -28(TGGCCCGGATTC,+,0.00) -59(AGCCGATT,-,0.00) -120(CTGCACGA,-,0.00) -135(CGTCGCCA,+,0.00) 561_WT_peak_677 chr1 201476364 201476534 + 36 NA promoter-TSS (NM_001193571) promoter-TSS (NM_001193571) -62 NM_001193570 1465 Hs.108080 NM_004078 HPRD:00470 CSRP1 CRP|CRP1|CSRP|CYRP|D1S181E|HEL-141 cysteine and glycine-rich protein 1 protein-coding 0.117647 0.725146 -134(CCGGGAAGGCCG,-,0.00) -45(TCGCCGCC,+,0.00) -113(GGCGGGGG,+,0.00) -73(TCGTGCTG,+,0.00) -50(CCCTGTCGCCGC,-,0.00) 561_WT_peak_2895 chr16 70834567 70834653 + 36 NA intron (NM_018052, intron 1 of 18) intron (NM_018052, intron 1 of 18) 451 NM_018052 55697 Hs.445061 NM_018052 HPRD:07660 VAC14 ArPIKfyve|TAX1BP2|TRX Vac14 homolog (S. cerevisiae) protein-coding 0.023256 0.551724 -113(GCTGGGAAGG,+,0.00) 561_WT_peak_2947 chr16 88767129 88767299 + 36 NA intron (NM_001171816, intron 2 of 5) intron (NM_001171816, intron 2 of 5) 2811 NM_001171816 115992 Hs.513804 NM_178841 HPRD:15260 RNF166 - ring finger protein 166 protein-coding 0.029412 0.649123 -7(CCCGCGGC,-,0.00) -146(GGACATGGGGGC,-,0.00) 561_WT_peak_1406 chr11 72854135 72854265 + 36 NA Intergenic Intergenic -1057 NM_014824 9873 Hs.744959 NM_014824 HPRD:13321 FCHSD2 NWK|SH3MD3 FCH and double SH3 domains 2 protein-coding 0.053846 0.572519 -98(CCGCTGAGAGGG,-,0.00) 561_WT_peak_5269 chr3 136471080 136471250 + 36 NA promoter-TSS (NM_005862) promoter-TSS (NM_005862) 80 NM_005862 10274 Hs.412586 NM_005862 HPRD:05076 STAG1 SA1|SCC3A stromal antigen 1 protein-coding 0.094118 0.654971 -107(GCCGGGGG,+,0.00) -86(GCCGCGCC,+,0.00) -92(GCGGGGGCCGCG,+,0.00) -88(GGGCCGCGCC,+,0.00) -29(GCCAATGGCGCC,-,0.00) 561_WT_peak_5335 chr3 182513135 182513316 + 36 NA intron (NM_014616, intron 1 of 29) intron (NM_014616, intron 1 of 29) 1934 NM_014616 23200 Hs.478429 NM_014616 HPRD:10432 ATP11B ATPIF|ATPIR ATPase, class VI, type 11B protein-coding 0.005525 0.362637 -3(AGGGCCGGAA,-,0.00) 561_WT_peak_5118 chr3 51720678 51720848 + 36 NA intron (NM_001243725, intron 3 of 4) intron (NM_001243725, intron 3 of 4) 15120 NR_103463 51368 Hs.517864 NM_015926 HPRD:15492 TEX264 ZSIG11 testis expressed 264 protein-coding 0.017647 0.625731 -48(AGGCCTCT,+,0.00) -147(GCGGGCTGGCTG,+,0.00) 561_WT_peak_7072 chr8 96112518 96112666 + 36 NA Intergenic Intergenic -27368 NR_037484 100500907 NR_037484 miRBase:MI0016426 MIR3150B - microRNA 3150b ncRNA 0.000000 0.335570 561_WT_peak_7480 chr9 138800233 138800403 + 36 NA Intergenic CpG-27310 -1313 NM_015447 157922 Hs.522493 NM_015447 HPRD:13001 CAMSAP1 PRO2405|bA100C15.1 calmodulin regulated spectrin-associated protein 1 protein-coding 0.070588 0.649123 -131(CGCCCGGC,-,0.00) 561_WT_peak_3372 chr17 78121241 78121458 + 36 NA promoter-TSS (NM_014740) promoter-TSS (NM_014740) -367 NM_014740 9775 Hs.389649 NM_014740 HPRD:06482 EIF4A3 DDX48|MUK34|NMP265|NUK34|RCPS|eIF4AIII eukaryotic translation initiation factor 4A3 protein-coding 0.105991 0.683486 37(CACGGCCGCC,-,0.00) -124(GGGCCGCGAGGG,-,0.00) -129(GGCTGGGGCCGC,-,0.00) -101(GGGCGGGGTC,+,0.00) -80(CCGCCTCG,-,0.00) 561_WT_peak_7257 chr9 37464991 37465284 + 36 NA intron (NM_014872, intron 1 of 1) CpG 270 NM_014872 9925 Hs.161276 NM_014872 HPRD:08829 ZBTB5 - zinc finger and BTB domain containing 5 protein-coding 0.102389 0.683673 69(CCGCCCCCCTCC,+,0.00),72(CCCCCCTCCTCC,+,0.00) -157(GGCGTCGG,-,0.00),-29(CCGACGCC,+,0.00) -39(TGCGCGCT,-,0.00) 65(GGCTCCGCCC,-,0.00) -27(GACGCCTTGGCG,+,0.00),-25(CGCCTTGGCGCG,-,0.00) -121(CCGCCTGGCCCC,-,0.00) 561_WT_peak_3033 chr17 8066059 8066229 + 36 NA intron (NM_014232, intron 1 of 4) CpG 149 NM_014232 6844 Hs.25348 NM_014232 HPRD:01717 VAMP2 SYB2|VAMP-2 vesicle-associated membrane protein 2 (synaptobrevin 2) protein-coding 0.135294 0.783626 -41(GGCGGCCGAC,+,0.00) -25(GGCGGGGG,+,0.00) -144(GCCTGGCCCCGG,-,0.00),-24(GCGGGGGCAGCG,+,0.00) 561_WT_peak_1617 chr12 13254359 13254526 + 36 NA intron (NM_001206842, intron 1 of 5) CpG 2188 NM_001080555 83445 Hs.240053 NM_031289 HPRD:11015 GSG1 - germ cell associated 1 protein-coding 0.083832 0.732143 -57(CGCGGAGGGCGG,-,0.00) -57(CGCGGAGGGCGG,-,0.00) -135(TCCGTCGG,-,0.00) -77(AGGCCAGGGA,-,0.00),-52(AGGGCGGGGC,-,0.00) -27(GCTGGGCCGGGG,+,0.00) -65(CGGCGAGCCGCG,+,0.00) 561_WT_peak_2327 chr14 90864450 90864659 + 36 NA intron (NM_006888, intron 1 of 5) CpG 1227 NM_006888 801 Hs.282410 NM_006888 HPRD:00241 CALM1 CALML2|CAMI|CPVT4|DD132|PHKD|caM calmodulin 1 (phosphorylase kinase, delta) protein-coding 0.100478 0.752381 -142(CGGGGGAGGAGG,-,0.00) -56(TCGTCGCC,+,0.00) -160(GGCGGGGG,+,0.00),-144(GGCGGGGG,+,0.00),-65(GCCGCGGG,+,0.00),13(GCCGGGGG,+,0.00) -104(TAGAGACG,-,0.00) -45(GGGAGCAGAAGC,+,0.00) 4(TGCGCGGG,-,0.00) -72(CGGCGGCGCCGC,-,0.00) -71(GGCGGCGCCGCG,+,0.00),-71(GGCGGCGCCGCG,-,0.00) -73(GCGGCGGCGC,+,0.00) 561_WT_peak_3629 chr19 11925073 11925272 + 36 NA promoter-TSS (NM_152357) promoter-TSS (NM_152357) 65 NM_152357 126070 Hs.418192 NM_152357 HPRD:11718 ZNF440 - zinc finger protein 440 protein-coding 0.070352 0.605000 -151(TCGCCCTCCGTC,+,0.00) 561_WT_peak_3285 chr17 58603122 58603311 + 36 NA exon (NM_006380, exon 1 of 13) exon (NM_006380, exon 1 of 13) 385 NM_006380 10513 Hs.84084 NM_006380 HPRD:05616 APPBP2 APP-BP2|HS.84084|PAT1 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 protein-coding 0.063492 0.578947 14(CCCTCCTCCTCC,+,0.00) -5(CACGGCCGCC,-,0.00) 561_WT_peak_2416 chr15 31556413 31556595 + 36 NA Intergenic Intergenic -33454 NM_001243538 283710 Hs.591097 NM_001243538 LOC283710 - uncharacterized LOC283710 protein-coding 0.027473 0.655738 -26(GCTGCCAGGGCC,+,0.00) 561_WT_peak_5308 chr3 160283000 160283372 + 36 NA 5' UTR (NM_002268, exon 1 of 17) 5' UTR (NM_002268, exon 1 of 17) 190 NM_002268 3840 Hs.467866 NM_002268 HPRD:04275 KPNA4 IPOA3|QIP1|SRP3 karyopherin alpha 4 (importin alpha 3) protein-coding 0.112903 0.713137 78(CCGCCCCCCCGC,+,0.00) -73(CCCCCGCC,-,0.00),83(CCCCCGCC,-,0.00),134(GCCGGGCG,+,0.00) 167(CGGCTGAGAGGG,-,0.00) 16(GCCGCGCC,+,0.00) -67(CCCGGGCCCCGC,-,0.00),-66(CCGGGCCCCGCG,+,0.00) -54(GGATCCGCCC,-,0.00) -101(TCCGCCATGGCC,+,0.00),-99(CGCCATGGCCGG,-,0.00) 19(GCGCCGCCGC,-,0.00) 561_WT_peak_1256 chr11 36531654 36531827 + 36 NA 5' UTR (NM_004620, exon 1 of 7) 5' UTR (NM_004620, exon 1 of 7) 123 NM_145803 7189 Hs.444172 NM_004620 TRAF6 MGC:3310|RNF85 TNF receptor-associated factor 6, E3 ubiquitin protein ligase protein-coding 0.092486 0.678161 -55(CGCTGGCCGCCC,-,0.00) -113(CCGAGACG,-,0.00) -154(CAGCCAAGGCGC,-,0.00) 561_WT_peak_6469 chr6 130536760 130536902 + 36 NA intron (NM_001017373, intron 2 of 11) intron (NM_001017373, intron 2 of 11) 199 NM_001277185 154075 Hs.440508 NM_152552 HPRD:11530 SAMD3 - sterile alpha motif domain containing 3 protein-coding 0.000000 0.468531 -95(AAGTGGTT,+,0.00) 561_WT_peak_643 chr1 181057693 181058031 + 36 NA 5' UTR (NM_016545, exon 1 of 1) 5' UTR (NM_016545, exon 1 of 1) 224 NM_016545 51278 Hs.15725 NM_016545 HPRD:06210 IER5 SBBI48 immediate early response 5 protein-coding 0.115385 0.666667 -67(GGCGGTCGAG,+,0.00) 152(GGCGCCGA,-,0.00) -128(CGTGCGCG,-,0.00) -18(TAGCGACC,-,0.00) -126(TGCGCGGC,-,0.00) 98(GGGCGGACTT,+,0.00) -161(GGCCCTGGCGCC,-,0.00) -37(GCAGCCAGGCTG,+,0.00),-36(CAGCCAGGCTGC,-,0.00) 561_WT_peak_3603 chr19 7702070 7702254 + 36 NA intron (NM_001272034, intron 1 of 18) CpG 175 NM_001127396 6813 Hs.515104 NM_006949 HPRD:03423 STXBP2 FHL5|Hunc18b|MUNC18-2|UNC18-2|UNC18B|pp10122 syntaxin binding protein 2 protein-coding 0.097826 0.740541 -49(GGCGTCCGAG,+,0.00) -77(TGGCGGCT,+,0.00) 2(TGGACGCC,+,0.00) -146(GGGCCGGGCT,+,0.00),-60(GGGCCGGGCT,+,0.00) -61(GGGGCCGGGCTG,+,0.00) 561_WT_peak_1654 chr12 39861352 39861589 + 36 NA Intergenic Tigger1|DNA|TcMar-Tigger -24278 NM_001173465 55605 Hs.374201 NM_017641 HPRD:10506 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding 0.000000 0.369748 561_WT_peak_7085 chr8 101514945 101515154 + 36 NA Intergenic Intergenic 56890 NM_001270378 157567 Hs.530199 NM_198401 HPRD:14103 ANKRD46 ANK-S|GENX-115279 ankyrin repeat domain 46 protein-coding 0.004785 0.466667 561_WT_peak_377 chr1 111746464 111746775 + 36 NA intron (NM_001271833, intron 1 of 11) CpG 541 NM_001271833 79961 Hs.557850 NM_024901 DENND2D - DENN/MADD domain containing 2D protein-coding 0.083601 0.730769 31(AACGGCTT,-,0.00) 124(GCTCCTTCCCGC,+,0.00) -114(GGCGGCGA,-,0.00) 64(CCCCCTCAGGCC,+,0.00),112(CCCTCTCCGCGC,+,0.00) -50(CACAACCG,+,0.00) 35(GCTTCCTGTGTC,-,0.00) -158(CGCTGGCTCCGA,-,0.00),82(CGCCGTCCCCGC,-,0.00) -43(GGGGCGCTTT,+,0.00) -120(TCCCAGGGCGGC,-,0.00) 561_WT_peak_5072 chr3 42623698 42623992 + 36 NA promoter-TSS (NM_001201584) promoter-TSS (NM_001201584) -325 NM_004206 9117 Hs.445892 NM_004206 HPRD:04938 SEC22C SEC22L3 SEC22 vesicle trafficking protein homolog C (S. cerevisiae) protein-coding 0.074830 0.630508 66(CCGACCCA,+,0.00) -102(TCCTGCCG,+,0.00) 64(GTCCGACC,-,0.00) -63(GGAGGCTCCGCG,-,0.00),-10(CGCGGCTGGGCG,-,0.00) 561_WT_peak_537 chr1 154130429 154130590 + 36 NA 3' UTR (NM_001043352, exon 8 of 8) 3' UTR (NM_001043352, exon 8 of 8) -2917 NM_207308 91181 Hs.67639 NM_207308 HPRD:14852 NUP210L - nucleoporin 210kDa-like protein-coding 0.006211 0.438272 -75(AGGTTTTG,-,0.00) -113(GAAAGAGCAAGC,+,0.00) 561_WT_peak_2097 chr13 111364971 111365222 + 36 NA promoter-TSS (NM_198219) promoter-TSS (NM_198219) 126 NM_198217 3621 Hs.46700 NM_005537 HPRD:03337 ING1 p24ING1c|p33|p33ING1|p33ING1b|p47|p47ING1a inhibitor of growth family, member 1 protein-coding 0.071713 0.666667 -146(GGGGGAGGGCGG,-,0.00) -57(AGCGGCCT,-,0.00),78(AAGCCGTT,+,0.00) -146(GGGGGAGGGCGG,-,0.00) -107(CCGGCCGA,+,0.00),-103(CCGACCGG,+,0.00) 36(CGGCACTA,-,0.00) 55(CCCTCTCAGGCC,+,0.00) -130(GGGAGCTGAATG,+,0.00) -81(TGGGCGGC,-,0.00) -152(CGACGCGG,+,0.00) 561_WT_peak_5735 chr5 49736989 49737443 + 36 NA promoter-TSS (NM_198449) promoter-TSS (NM_198449) 18 NM_198449 133418 Hs.561411 NM_198449 HPRD:13271 EMB GP70 embigin protein-coding 0.074890 0.650549 116(CCGGCCTCCGCC,+,0.00) -15(CCCGGCCGCC,-,0.00) 66(TGGCGTTCCCGG,+,0.00),123(CCGCCCTCTCGG,+,0.00) -120(TCGCCGCC,+,0.00) -77(GGCCCGGCGCTC,-,0.00) 26(GCCCGGCCCT,+,0.00) -115(GCCGCGGG,+,0.00),-56(GCCGCGGG,+,0.00),25(CGCCCGGC,-,0.00) 126(CCCTCTCGGCTC,+,0.00) 21(ACCGCGCC,+,0.00) 8(CCGAGACG,-,0.00) -11(GCCGCCTTGCCC,+,0.00) -19(GGGGCCCGGCCG,+,0.00) 561_WT_peak_4535 chr20 388819 389100 + 36 NA 5' UTR (NM_006462, exon 1 of 11) 5' UTR (NM_006462, exon 1 of 11) 250 NM_031229 10616 Hs.247280 NM_006462 HPRD:16643 RBCK1 C20orf18|HOIL-1|HOIL1|PBMEI|RBCK2|RNF54|UBCE7IP3|XAP3|XAP4|ZRANB4 RanBP-type and C3HC4-type zinc finger containing 1 protein-coding 0.103203 0.716312 -18(AAGCCGCT,+,0.00) -73(CCCTCCCAGTCC,+,0.00) -137(GTCCGCCG,-,0.00) 48(GACGCCAGGGGC,+,0.00) 561_WT_peak_5845 chr5 86636618 86636821 + 36 NA intron (NM_002890, intron 5 of 24) intron (NM_002890, intron 5 of 24) 71978 NM_022650 5921 Hs.664080 NM_002890 HPRD:00745 RASA1 CM-AVM|CMAVM|GAP|PKWS|RASA|RASGAP|p120GAP|p120RASGAP RAS p21 protein activator (GTPase activating protein) 1 protein-coding 0.004926 0.401961 561_WT_peak_5146 chr3 69062775 69063015 + 36 NA non-coding (NR_103826, exon 1 of 16) non-coding (NR_103826, exon 1 of 16) 150 NM_001278689 285203 Hs.518059 NM_173654 HPRD:12435 EOGT AER61|AOS4|C3orf64|EOGT1 EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase protein-coding 0.116667 0.755187 -137(AACCGGCT,+,0.00),33(AGCGGCTT,-,0.00),51(AGCGGCCT,-,0.00) 54(GGCCTCGA,-,0.00) 20(GCCCGACG,-,0.00) -140(CATAACCG,+,0.00) -97(GCTGGGCCAGGG,+,0.00),-35(CTCGGGCCCCGC,-,0.00),15(GCGGGGCCCGAC,+,0.00) -50(GGCGCCGTGGGC,+,0.00),6(GGCCAGGGCGCG,-,0.00) 561_WT_peak_2064 chr13 53024699 53024891 + 36 NA promoter-TSS (NM_016075) promoter-TSS (NM_016075) 18 NM_001282168 51028 Hs.109520 NM_016075 HPRD:12620 VPS36 C13orf9|EAP45 vacuolar protein sorting 36 homolog (S. cerevisiae) protein-coding 0.145833 0.787565 -162(AGGCCGCT,+,0.00),-16(AGCGGCCT,-,0.00) -120(CAGCCCCGGCCC,+,0.00) -60(TCGGACGG,-,0.00) -117(CCCCGGCCCT,+,0.00) -23(CGGAGGGAGCGG,+,0.00) -65(TAGCGTCG,-,0.00) -62(CGTCGGAC,+,0.00),-61(GTCGGACG,-,0.00) -79(CCTGCGGCGCCC,-,0.00) 3(GGCGCGGC,-,0.00) 5(CGCGGCTGCGAG,-,0.00) -44(CGAGTCGG,+,0.00) -139(GTCCATGGCCGC,-,0.00) -12(GCCTGGCAGC,-,0.00) -15(GCGGCCTGGCAG,+,0.00) 561_WT_peak_6700 chr7 72300052 72300222 + 36 NA non-coding (NR_024111, exon 1 of 4) non-coding (NR_024111, exon 1 of 4) 185 NR_024109 155370 Hs.585053 NR_001588 ENSG00000225648 SBDSP1 SBDSP Shwachman-Bodian-Diamond syndrome pseudogene 1 pseudo 0.117647 0.678363 -140(TGGCGGCT,+,0.00) -72(TCGGTCGT,-,0.00) -109(GCCGCGCA,+,0.00) -115(CGCGGCGCCGCG,+,0.00),-115(CGCGGCGCCGCG,-,0.00) 561_WT_peak_6472 chr6 131521013 131521238 + 35 NA intron (NM_016377, intron 6 of 7) intron (NM_016377, intron 6 of 7) -50174 NM_138633 9465 Hs.486483 NM_004842 HPRD:16065 AKAP7 AKAP15|AKAP18 A kinase (PRKA) anchor protein 7 protein-coding 0.017778 0.495575 -55(TTTACCCC,-,0.00) -130(GCATCCTGTTGC,-,0.00) 561_WT_peak_97 chr1 22366390 22366581 + 35 NA Intergenic Intergenic -12635 NM_001791 998 Hs.467637 NM_001791 HPRD:00309 CDC42 CDC42Hs|G25K cell division cycle 42 protein-coding 0.015707 0.562500 -63(CAACACCG,+,0.00) -148(GGGCCTCTTT,+,0.00) -50(GCAGCCAGGGCC,+,0.00) 561_WT_peak_2005 chr13 41579163 41579357 + 35 NA intron (NM_172373, intron 1 of 8) intron (NM_172373, intron 1 of 8) 14248 NM_172373 1997 Hs.135646 NM_172373 HPRD:01808 ELF1 - E74-like factor 1 (ets domain transcription factor) protein-coding 0.000000 0.333333 561_WT_peak_4257 chr2 112264607 112264796 + 35 NA Intergenic Intergenic -12009 NR_024373 541471 Hs.560805 NR_015395 ENSG00000172965 MIR4435-1HG AGD2|LINC00978 MIR4435-1 host gene (non-protein coding) ncRNA 0.010582 0.521053 -37(CTTCTCGG,+,0.00) 561_WT_peak_3023 chr17 7745664 7745848 + 35 NA intron (NM_001080424, intron 1 of 21) CpG 2521 NM_001080424 23135 Hs.223678 NM_001080424 ENSG00000132510 KDM6B JMJD3 lysine (K)-specific demethylase 6B protein-coding 0.059783 0.589189 -70(CGCGTGCG,+,0.00) -138(TGGGTCGG,-,0.00) -128(CGGGAGAGGCTG,+,0.00) 561_WT_peak_1513 chr11 122933020 122933234 + 35 NA promoter-TSS (NM_006597) promoter-TSS (NM_006597) -84 NM_153201 3312 Hs.180414 NM_006597 HPRD:07205 HSPA8 HEL-33|HEL-S-72p|HSC54|HSC70|HSC71|HSP71|HSP73|HSPA10|LAP-1|LAP1|NIP71 heat shock 70kDa protein 8 protein-coding 0.121495 0.716279 24(GCGGGAGGGAGG,-,0.00) -23(GGCGGGGG,+,0.00) -81(CGGGGAAA,+,0.00) -59(CAGCGAGTCCGC,-,0.00) 561_WT_peak_4363 chr2 172016852 172017069 + 35 NA 5' UTR (NM_012290, exon 1 of 21) 5' UTR (NM_012290, exon 1 of 21) 450 NM_012290 9874 Hs.744917 NM_012290 ENSG00000198586 TLK1 PKU-beta tousled-like kinase 1 protein-coding 0.096774 0.692661 34(AGGGCTGGGA,-,0.00) 0(GGCGGGGG,+,0.00) 35(GGGCTGGGAGGG,-,0.00) 1(GCGGGGGCCGCG,+,0.00) 5(GGGCCGCGCT,+,0.00) -6(CGTCATGGCGGG,-,0.00) 561_WT_peak_3517 chr18 60173386 60173653 + 35 NA Intergenic Intergenic -17139 NM_017742 54877 Hs.114191 NM_017742 HPRD:11696 ZCCHC2 C18orf49 zinc finger, CCHC domain containing 2 protein-coding 0.011236 0.380597 561_WT_peak_2066 chr13 60970206 60970390 + 35 NA promoter-TSS (NM_001146071) promoter-TSS (NM_001146071) -293 NM_030794 81550 Hs.525061 NM_030794 HPRD:11625 TDRD3 - tudor domain containing 3 protein-coding 0.038043 0.562162 -68(GCAGGGGCAGCG,+,0.00) 561_WT_peak_509 chr1 150241141 150241376 + 35 NA non-coding (NR_045034, exon 1 of 4) non-coding (NR_045034, exon 1 of 4) 351 NM_001243771 51107 Hs.108408 NM_016022 ENSG00000117362 APH1A 6530402N02Rik|APH-1|APH-1A|CGI-78 APH1A gamma secretase subunit protein-coding 0.085106 0.686441 -137(CGAACGCG,-,0.00) 11(GGCGCGGT,-,0.00) -6(AACGCGACCC,-,0.00) -102(GCCCCCATGGCT,+,0.00),-100(CCCCATGGCTGG,-,0.00) 561_WT_peak_6960 chr8 29265955 29266104 + 35 NA Intergenic Intergenic -57762 NM_001394 1846 Hs.417962 NM_001394 HPRD:04123 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding 0.026846 0.420000 -24(AGGCCTCT,+,0.00) 561_WT_peak_5706 chr5 40679487 40679787 + 35 NA promoter-TSS (NM_000958) promoter-TSS (NM_000958) -395 NM_000958 5734 Hs.199248 NM_000958 HPRD:03350 PTGER4 EP4|EP4R prostaglandin E receptor 4 (subtype EP4) protein-coding 0.090000 0.621262 92(AGCGGCTA,-,0.00) -114(CGCACGCG,-,0.00) 109(CGGGGAAA,+,0.00) 36(CGAGGCGG,+,0.00) 32(GCAGCGAGGC,+,0.00) 561_WT_peak_6303 chr6 35227529 35227795 + 35 NA intron (NM_003427, intron 1 of 13) CpG 171 NM_001292032 7629 Hs.388024 NM_003427 HPRD:01929 ZNF76 D6S229E|ZNF523|Zfp523 zinc finger protein 76 protein-coding 0.097744 0.779026 -35(GCGGGAGGCCGG,-,0.00),-27(CCGGGCGGGCGC,-,0.00) -143(GGGCCGGCGCTG,-,0.00) -107(TCTGTCGG,-,0.00) -28(GCCGGGCG,+,0.00) -146(GTGGGGCCGGCG,+,0.00),-128(GCGGGGCCCGGT,+,0.00),-28(GCCGGGCGGGCG,+,0.00) -42(GCCCAGGGCGGG,-,0.00) 41(GCGGCCTGGCCG,+,0.00),42(CGGCCTGGCCGC,-,0.00),61(CGGCCGGGCCCC,-,0.00) 561_WT_peak_2393 chr14 106467347 106467531 + 35 NA Intergenic Intergenic -29081 NR_002224 8755 Hs.662288 NR_002224 ENSG00000233988 ADAM6 C14orf96|tMDCIV ADAM metallopeptidase domain 6, pseudogene pseudo 0.021739 0.627027 561_WT_peak_5671 chr5 14595384 14595472 + 35 NA intron (NM_019018, intron 1 of 7) intron (NM_019018, intron 1 of 7) 13537 NM_019018 54491 Hs.155085 NM_019018 FAM105A NET20 family with sequence similarity 105, member A protein-coding 0.000000 0.449438 561_WT_peak_5062 chr3 39447745 39447785 + 35 NA promoter-TSS (NM_002295) promoter-TSS (NM_002295) -439 NM_002295 3921 Hs.449909 NM_002295 HPRD:01038 RPSA 37LRP|67LR|ICAS|LAMBR|LAMR1|LBP|LBP/p40|LRP|LRP/LR|NEM/1CHD4|SA|lamR|p40 ribosomal protein SA protein-coding 0.025000 0.341463 561_WT_peak_6047 chr5 179248685 179248728 + 35 NA intron (NM_003900, intron 1 of 7) CpG 864 NM_003900 8878 Hs.724025 NM_003900 HPRD:03319 SQSTM1 A170|OSIL|PDB3|ZIP3|p60|p62|p62B sequestosome 1 protein-coding 0.116279 0.636364 561_WT_peak_6339 chr6 44280849 44281245 + 35 NA promoter-TSS (NM_020745) promoter-TSS (NM_020745) 16 NM_020745 57505 Hs.158381 NM_020745 HPRD:12397 AARS2 AARSL|COXPD8|LKENP|MT-ALARS|MTALARS alanyl-tRNA synthetase 2, mitochondrial protein-coding 0.095960 0.680101 151(CTCTGCCGCC,-,0.00) -156(GCCGCGGG,+,0.00),205(CGCCCGGC,-,0.00) -154(CGCGGGGCCGCA,+,0.00) -89(AAGGCGGCCC,-,0.00),113(ACAGCGGCCC,-,0.00) -120(GTGGCCATGGCG,+,0.00),-118(GGCCATGGCGGT,-,0.00),-69(GGCCTTGGCTGC,-,0.00),-22(CCCGCCATGCGG,+,0.00) -156(GCCGCGGGGC,+,0.00) 561_WT_peak_6824 chr7 115785553 115785781 + 35 NA Intergenic Intergenic -64880 NM_015641 26136 Hs.592286 NM_015641 HPRD:05833 TES TESS|TESS-2 testis derived transcript (3 LIM domains) protein-coding 0.000000 0.401747 561_WT_peak_93 chr1 20834732 20834869 + 35 NA promoter-TSS (NM_024544) promoter-TSS (NM_024544) -126 NM_024544 79594 Hs.10101 NM_024544 HPRD:07799 MUL1 C1orf166|GIDE|MAPL|MULAN|RNF218 mitochondrial E3 ubiquitin protein ligase 1 protein-coding 0.080292 0.673913 -83(CGCTCCATGGCC,+,0.00) 561_WT_peak_7064 chr8 90741407 90741547 + 34 NA Intergenic Intergenic -28498 NM_003821 8767 Hs.103755 NM_003821 HPRD:04585 RIPK2 CARD3|CARDIAK|CCK|GIG30|RICK|RIP2 receptor-interacting serine-threonine kinase 2 protein-coding 0.014286 0.482270 -147(CAGTTTTG,-,0.00) 561_WT_peak_1140 chr10 106098544 106098738 + 34 NA promoter-TSS (NM_001272013) promoter-TSS (NM_001272013) -390 NM_001272013 85450 Hs.523252 NM_033397 ITPRIP DANGER|KIAA1754|bA127L20|bA127L20.2 inositol 1,4,5-trisphosphate receptor interacting protein protein-coding 0.030928 0.430769 561_WT_peak_7635 chrY 1274847 1275058 + 34 NA intron (NM_001012288, intron 2 of 4).2 intron (NM_001012288, intron 2 of 4).2 6664 NM_001012288 64109 Hs.287729 NM_022148 HPRD:02288 CRLF2 CRL2|CRLF2Y|TSLPR cytokine receptor-like factor 2 protein-coding 0.052133 0.419811 -92(AGCGACTA,-,0.00) 10(ATCCGACG,-,0.00) 561_WT_peak_3501 chr18 47339560 47339765 + 34 NA promoter-TSS (NR_117096) promoter-TSS (NR_117096) 589 NM_006111 10449 Hs.200136 NM_006111 HPRD:10380 ACAA2 DSAEC acetyl-CoA acyltransferase 2 protein-coding 0.063415 0.519417 -107(TGCACCGAAATC,+,0.00) -93(TGTCGCTA,+,0.00) -13(CAAAACCG,+,0.00) 561_WT_peak_3127 chr17 33668606 33668859 + 34 NA Intergenic MER11D|LTR|ERVK 31988 NM_001104589 91607 Hs.745059 NM_152270 HPRD:08178 SLFN11 SLFN8/9 schlafen family member 11 protein-coding 0.015810 0.448819 40(ACATCCTGTTTC,-,0.00) 561_WT_peak_3003 chr17 5487890 5488060 + 34 NA promoter-TSS (NM_033004) promoter-TSS (NM_033004) -143 NM_033007 22861 Hs.652273 NM_014922 HPRD:07364 NLRP1 CARD7|CIDED|CLR17.1|DEFCAP|DEFCAP-L/S|NAC|NALP1|PP1044|SLEV1|VAMAS1 NLR family, pyrin domain containing 1 protein-coding 0.023529 0.590643 561_WT_peak_4001 chr2 27603621 27603967 + 34 NA promoter-TSS (NM_144631) promoter-TSS (NM_144631) -183 NM_144631 130557 Hs.515872 NM_144631 HPRD:15813 ZNF513 HMFT0656|RP58 zinc finger protein 513 protein-coding 0.104046 0.694524 -20(GCGGGGAGCCGG,-,0.00) 113(GCGACGCC,+,0.00) -154(CGTACTCG,-,0.00) -143(CCGCTTCCGCCG,-,0.00) -49(CGAGGCGG,+,0.00),111(CCGCGACG,-,0.00) 110(GCCGCGACGC,+,0.00) 39(CAGCCAGACCGG,-,0.00),120(CCGCCAGGCCGG,-,0.00) 561_WT_peak_3715 chr19 32836536 32836906 + 34 NA intron (NM_014910, intron 1 of 5) CpG 207 NM_001136156 22847 Hs.205392 NM_014910 HPRD:11722 ZNF507 - zinc finger protein 507 protein-coding 0.091892 0.711590 -144(TGAGGAGGGGGA,-,0.00),-88(GGACGAGGGCGA,-,0.00) 59(AGGCCTCT,+,0.00) -107(CCGGGAGAGAGG,-,0.00) 90(CCGGCCGA,+,0.00) -111(AGAGCCGGGA,-,0.00) 98(CCCCCGCC,-,0.00) -39(CGGAAGCAGCAG,+,0.00) 25(TAGCGCCG,-,0.00) 139(CGGTTCTG,-,0.00) -8(ACCGCGCC,+,0.00) 27(GCGCCGCCGC,-,0.00) -66(GGGTCCTGGCTG,+,0.00) 561_WT_peak_3450 chr18 18691270 18691463 + 34 NA 5' UTR (NM_005406, exon 1 of 33) 5' UTR (NM_005406, exon 1 of 33) 446 NM_005406 6093 Hs.306307 NM_005406 ROCK1 P160ROCK|ROCK-I Rho-associated, coiled-coil containing protein kinase 1 protein-coding 0.119171 0.716495 -35(CCGCGTCCCCGG,+,0.00) -80(CGGGCCGGGC,-,0.00),-14(GCCCGGCCCG,+,0.00) -11(CGGCCCGA,-,0.00) -9(GCCCGACG,-,0.00) -78(GGCCGGGCCCGC,-,0.00) -20(TACTCGGCCC,-,0.00) -21(CTACTCGG,+,0.00) 561_WT_peak_2768 chr16 29801678 29801907 + 34 NA promoter-TSS (NM_007317) promoter-TSS (NM_007317) -242 NM_001256269 3835 Hs.612151 NM_007317 HPRD:04445 KIF22 A-328A3.2|KID|KNSL4|OBP|OBP-1|OBP-2|SEMDJL2 kinesin family member 22 protein-coding 0.104803 0.673913 -56(GCCGGGCG,+,0.00) -21(CGTCGCCA,+,0.00) -151(GTCCCACG,-,0.00) 38(TGCGCGGC,-,0.00) -130(CCCTGGCTCCGC,-,0.00) -53(GGGCGGCGCT,+,0.00) -125(GCTCCGCAGA,-,0.00),36(GCTGCGCGGC,+,0.00) 561_WT_peak_6942 chr8 22301349 22301417 + 34 NA intron (NM_005605, intron 1 of 13) intron (NM_005605, intron 1 of 13) 2900 NM_001243974 5533 Hs.731683 NM_005605 HPRD:00236 PPP3CC CALNA3|CNA3|PP2Bgamma protein phosphatase 3, catalytic subunit, gamma isozyme protein-coding 0.029412 0.449275 561_WT_peak_4999 chr3 9974887 9975223 + 34 NA promoter-TSS (NM_015513) promoter-TSS (NM_015513) -469 NM_015513 78987 Hs.9383 NM_015513 HPRD:06206 CRELD1 AVSD2|CIRRIN cysteine-rich with EGF-like domains 1 protein-coding 0.104167 0.721068 -148(GTGTCCGGGCCC,-,0.00) 77(CCGCGTTCCGGG,+,0.00) -120(ACGACGCC,+,0.00) -11(CGTACCCG,-,0.00) -72(AGGGCCGGGC,-,0.00) -69(GCCGGGCG,+,0.00),-63(CGCCCGGC,-,0.00) -124(CCGCACGA,-,0.00) 561_WT_peak_2953 chr16 89574372 89574695 + 34 NA promoter-TSS (NM_199367) promoter-TSS (NM_199367) -263 NM_003119 6687 Hs.185597 NM_003119 HPRD:04149 SPG7 CAR|CMAR|PGN|SPG5C spastic paraplegia 7 (pure and complicated autosomal recessive) protein-coding 0.123839 0.740741 -100(GATTCCGGCCCG,-,0.00) 23(TTCACCCG,-,0.00) -144(CTCCGGCGCCGC,-,0.00) -140(GGCGCCGCCC,-,0.00) 27(CCCGCCAGGCCC,+,0.00) 561_WT_peak_3848 chr19 49479519 49479702 + 34 NA intron (NR_027763, intron 9 of 14) intron (NR_027763, intron 9 of 14) 11044 NM_000146 2512 Hs.433670 NM_000146 HPRD:00616 FTL LFTD|NBIA3 ferritin, light polypeptide protein-coding 0.005464 0.516304 -75(AAGCCTCT,+,0.00) 561_WT_peak_2873 chr16 67876434 67876684 + 34 NA exon (NM_020457, exon 1 of 1) exon (NM_020457, exon 1 of 1) 346 NM_020457 57215 Hs.632200 NM_020457 HPRD:11629 THAP11 CTG-B43a|CTG-B45d|RONIN THAP domain containing 11 protein-coding 0.108000 0.657371 78(GGTACGCG,-,0.00) -164(CGGGCCGGGC,-,0.00) -18(GCGTGCCG,+,0.00) -151(GCGGCGCAGC,+,0.00),-151(GCGGCGCAGC,-,0.00) -163(GGGCCGGGCCGC,-,0.00) 561_WT_peak_1131 chr10 104154167 104154397 + 34 NA promoter-TSS (NM_001077494) promoter-TSS (NM_001077494) -53 NM_001077494 4791 Hs.73090 NM_002502 HPRD:01239 NFKB2 CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p105|p52 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) protein-coding 0.091304 0.666667 -86(GGGGGCCGAG,+,0.00) -96(CCCCCCTCCGGG,+,0.00) -17(TGGGTCGG,-,0.00) -67(TCCCGGCCCT,+,0.00) -84(GGGCCGAGAAGG,-,0.00) -81(CCGAGAAG,-,0.00),19(CCGCCACG,-,0.00) 18(GCCGCCACGGTG,+,0.00) 561_WT_peak_6036 chr5 177659460 177659630 + 34 NA exon (NM_153373, exon 1 of 13) exon (NM_153373, exon 1 of 13) 278 NM_153373 85007 Hs.248746 NM_153373 HPRD:18482 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding 0.147059 0.783626 -147(CCCCCCGCCCGG,+,0.00) -20(GGGCTGGGCCTC,-,0.00) -60(TCAGTCGG,-,0.00) -160(CCCCCGCC,-,0.00),-146(CCCCCGCC,-,0.00) -115(TCAGGGCCAGCG,+,0.00) -105(CGTGTCGG,+,0.00) -80(GCGGCCATGGTG,+,0.00),-78(GGCCATGGTGGG,-,0.00) 561_WT_peak_7111 chr8 110346641 110346815 + 34 NA promoter-TSS (NM_032869) promoter-TSS (NM_032869) 176 NR_036472 56943 Hs.492555 NM_020189 HPRD:13121 ENY2 e(y)2 enhancer of yellow 2 homolog (Drosophila) protein-coding 0.103448 0.685714 -14(CCGCGCTCGCGG,+,0.00) -79(AGGGCCGGGA,-,0.00) -141(CGTCGCTG,+,0.00) -68(CCGGGCCCAGCC,+,0.00) -137(GCTGGGAAGG,+,0.00) 561_WT_peak_4996 chr3 5239405 5239577 + 34 NA intron (NM_014674, intron 2 of 11) intron (NM_014674, intron 2 of 11) 10132 NM_014674 9695 Hs.224616 NM_014674 HPRD:09644 EDEM1 EDEM ER degradation enhancer, mannosidase alpha-like 1 protein-coding 0.005814 0.404624 561_WT_peak_3365 chr17 76352294 76352527 + 34 NA TTS (NM_003955) TTS (NM_003955) 3750 NM_003955 9021 Hs.527973 NM_003955 HPRD:05006 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding 0.017167 0.619658 -85(GGGGTGGGGCTC,-,0.00) 34(CGGAACGA,-,0.00) 561_WT_peak_5222 chr3 119396348 119396541 + 34 NA promoter-TSS (NM_005694) promoter-TSS (NM_005694) -201 NM_005694 10063 Hs.534383 NM_005694 COX17 - COX17 cytochrome c oxidase copper chaperone protein-coding 0.046632 0.525773 -4(CCGCTCCTCCCC,-,0.00) 561_WT_peak_1870 chr12 113646152 113646412 + 34 NA intron (NM_138451, intron 1 of 2) LTR33A_|LTR|ERVL 12617 NM_138451 115811 Hs.568276 NM_138451 HPRD:13744 IQCD 4933433C09Rik|CFAP84|DRC10 IQ motif containing D protein-coding 0.011538 0.509579 -78(AGGGCAGGAA,-,0.00) 561_WT_peak_4397 chr2 191399527 191399698 + 34 NA promoter-TSS (NM_001142645) promoter-TSS (NM_001142645) -144 NM_001142645 100131211 Hs.659824 NM_001142645 TMEM194B - transmembrane protein 194B protein-coding 0.122807 0.779070 -140(CCAGCCTCCGCC,+,0.00) -33(GCCTCCGGGCCT,-,0.00) -8(GGCGTCCA,-,0.00) -17(CGCACGCG,-,0.00) -130(CCCGCGGC,-,0.00) -111(GCGGGCCCAGGC,+,0.00) -118(GGGCACGGCGGG,-,0.00) 561_WT_peak_7603 chrX 118781975 118782145 + 34 NA intron (NM_145799, intron 5 of 10) intron (NM_145799, intron 5 of 10) -1249 NR_030413 768218 NR_030413 MIR766 MIRN766|hsa-mir-766 microRNA 766 ncRNA 0.000000 0.479532 561_WT_peak_2711 chr16 17684907 17684950 + 34 NA Intergenic Intergenic -120190 NM_022166 64131 Hs.22907 NM_022166 HPRD:12168 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI xylosyltransferase I protein-coding 0.000000 0.522727 561_WT_peak_6465 chr6 128255667 128255849 + 34 NA Intergenic Intergenic -15982 NM_001164687 387357 Hs.661756 NM_001010923 HPRD:16662 THEMIS C6orf190|C6orf207|GASP|SPOT|TSEPA|bA325O24.3|bA325O24.4 thymocyte selection associated protein-coding 0.005495 0.404372 561_WT_peak_1697 chr12 51420294 51420467 + 34 NA promoter-TSS (NM_001174129) promoter-TSS (NM_001174129) -181 NM_001174127 4891 Hs.505545 NM_000617 HPRD:02750 SLC11A2 DCT1|DMT1|NRAMP2 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 protein-coding 0.063584 0.683908 -11(TTCCTGCCCT,+,0.00) -70(CCCACACAGCCC,+,0.00) 561_WT_peak_7549 chrX 52926044 52926367 + 34 NA promoter-TSS (NM_001242491) promoter-TSS (NM_001242491) -117 NM_001242491 29057 Hs.6451 NM_014138 HPRD:06683 FAM156A PRO0659|TMEM29 family with sequence similarity 156, member A protein-coding 0.130031 0.682099 -140(AAGCCGCT,+,0.00) -132(CCGGGAACGCCG,-,0.00),94(GCCGGAGGGCGG,-,0.00) -95(TCCACGCC,+,0.00),24(GGCGTCGC,-,0.00) -82(CCCTCGCAGTCC,+,0.00) 56(CGCCGGCGCCCC,-,0.00) 141(GGGCGGCGCT,+,0.00) 75(GCTGCGGCGC,+,0.00) 561_WT_peak_527 chr1 151811031 151811401 + 34 NA exon (NM_001136003, exon 2 of 2) exon (NM_001136003, exon 2 of 2) 271 NR_024237 100132111 Hs.697059 NR_024237 LOC100132111 - uncharacterized LOC100132111 ncRNA 0.148649 0.781671 63(GCCGCCGGGCCG,-,0.00) -1(CAGCCTTCGCGG,+,0.00),38(GCGGGGAGGCCG,-,0.00) 152(GGGCAGGCGCTT,-,0.00) -91(GCCGCGGG,+,0.00),-79(CCCCCGGC,-,0.00),71(GCCGCGGG,+,0.00) 59(ACGTGCCG,+,0.00) 98(GGGAGCCGAGGC,+,0.00) 46(GCCGCGCC,+,0.00) 168(GCGGGCCCGGGG,+,0.00) 65(CGCCGGGCCGCG,+,0.00) 3(CTTCGCGG,+,0.00),54(CCGCCACG,-,0.00),104(CGAGGCGG,+,0.00) -142(GGGGCCCGGCAG,+,0.00),7(GCGGCCCGCCAG,+,0.00),64(CCGCCGGGCCGC,-,0.00) 561_WT_peak_5193 chr3 107810191 107810509 + 34 NA promoter-TSS (NM_198793) promoter-TSS (NM_198793) -415 NM_001777 961 Hs.446414 NM_001777 HPRD:03017 CD47 IAP|MER6|OA3 CD47 molecule protein-coding 0.116352 0.708464 -36(CCGCCCCAGCCC,+,0.00) 53(CGGACGCG,-,0.00) 107(AGGGCAGGGC,-,0.00) 43(CCGTTTCCTCCG,-,0.00) 67(TAGCGCCG,-,0.00) -51(GGGCCGGGTC,+,0.00) 96(CCGCCACG,-,0.00) 95(GCCGCCACGCCC,+,0.00) 561_WT_peak_4580 chr20 23338552 23338728 + 34 NA non-coding (NR_109884, exon 1 of 3) non-coding (NR_109884, exon 1 of 3) 124 NR_109884 100505683 Hs.140295 NR_109884 ENSG00000232645 LINC01431 - long intergenic non-protein coding RNA 1431 ncRNA 0.090909 0.649718 -129(CTGACCGA,+,0.00) -61(TGGGTAAA,+,0.00) -47(CCCAGACCCCGC,-,0.00) 561_WT_peak_6699 chr7 72299739 72299864 + 34 NA promoter-TSS (NM_001145440) promoter-TSS (NM_001145440) -151 NR_024111 155370 Hs.585053 NR_001588 ENSG00000225648 SBDSP1 SBDSP Shwachman-Bodian-Diamond syndrome pseudogene 1 pseudo 0.032000 0.325397 -64(CGGAACGA,-,0.00) 561_WT_peak_1046 chr10 74130070 74130302 + 34 NA intron (NM_001195518, intron 11 of 11) intron (NM_001195518, intron 11 of 11) -15279 NM_017626 54788 Hs.500013 NM_017626 HPRD:07086 DNAJB12 DJ10 DnaJ (Hsp40) homolog, subfamily B, member 12 protein-coding 0.000000 0.420601 -68(CAAAACCT,+,0.00),11(CAAAACCC,+,0.00),18(CAAAACCA,+,0.00),38(CAAAACCC,+,0.00),45(CAAAACCA,+,0.00) -15(GAGACAGGAAAC,+,0.00) 561_WT_peak_3147 chr17 37009830 37010113 + 34 NA promoter-TSS (NM_000978) promoter-TSS (NM_000978) 82 NM_000978 9349 Hs.406300 NM_000978 RPL23 L23|rpL17 ribosomal protein L23 protein-coding 0.070671 0.556338 41(CCACCCTCCTCA,+,0.00) -87(CTGCACGA,-,0.00) 71(CGGCCTCTTCCG,-,0.00) -54(CAAAACCT,+,0.00),65(AAAAACCG,+,0.00) -137(AAAGCGCCCC,-,0.00) 561_WT_peak_3937 chr19 58951158 58951478 + 34 NA 5' UTR (NM_003433, exon 1 of 3) 5' UTR (NM_003433, exon 1 of 3) 271 NM_003433 7691 Hs.156169 NM_003433 HPRD:07240 ZNF132 pHZ-12 zinc finger protein 132 protein-coding 0.059375 0.635514 -29(AGGCCTCT,+,0.00) 102(GGCGCGGT,-,0.00) 28(CGCTGGCTCCAC,-,0.00) 561_WT_peak_4041 chr2 42795984 42796188 + 34 NA intron (NM_020744, intron 1 of 13) CpG 429 NM_020744 57504 Hs.435413 NM_020744 HPRD:12359 MTA3 - metastasis associated 1 family, member 3 protein-coding 0.083333 0.746341 11(AGGCCTCT,+,0.00) -120(GGGCTGGGGCGC,-,0.00) -95(GGGGCCGGGA,-,0.00) -18(CCCTCGCACCCC,+,0.00) -153(GGGAGCCAAGGG,+,0.00),-66(CCTTCCCCTCCC,-,0.00) 561_WT_peak_2613 chr15 92400907 92400965 + 34 NA intron (NM_013272, intron 1 of 9) intron (NM_013272, intron 1 of 9) 3998 NM_013272 28232 Hs.311187 NM_013272 HPRD:07502 SLCO3A1 OATP-D|OATP3A1|OATPD|SLC21A11 solute carrier organic anion transporter family, member 3A1 protein-coding 0.017241 0.474576 561_WT_peak_2742 chr16 24740756 24741142 + 34 NA promoter-TSS (NM_014494) promoter-TSS (NM_014494) -100 NM_014494 27327 Hs.655057 NM_014494 HPRD:11640 TNRC6A CAGH26|GW1|GW182|TNRC6 trinucleotide repeat containing 6A protein-coding 0.121762 0.744186 168(CCCGCGGC,-,0.00) 210(GCCGCGCC,+,0.00) -140(CGCAGGCCCCCC,-,0.00),70(GCGGCGGCGGCG,+,0.00),88(GCGGCGGCGGCG,+,0.00),91(GCGGCGGCGGCG,+,0.00),94(GCGGCGGCGGCG,+,0.00),97(GCGGCGGCGGCG,+,0.00),100(GCGGCGGCGGCG,+,0.00),103(GCGGCGGCGGCG,+,0.00),106(GCGGCGGCGGCG,+,0.00),112(GCGGCGGCAGCG,+,0.00) 170(CGCGGCGCTGCG,+,0.00),170(CGCGGCGCTGCG,-,0.00) 11(GGCCGTGGCGCC,-,0.00) 176(GCTGCGGAGG,+,0.00),205(CCTTCGCCGC,-,0.00) -128(CAGCCACTCCGC,-,0.00) 561_WT_peak_6337 chr6 43655348 43655531 + 34 NA exon (NM_018135, exon 1 of 6) exon (NM_018135, exon 1 of 6) 110 NM_001193343 55168 Hs.520149 NM_018135 HPRD:14780 MRPS18A HumanS18b|MRP-S18-3|MRPS18-3|S18bmt mitochondrial ribosomal protein S18A protein-coding 0.065574 0.619565 -66(GCTGCCGGGCCC,-,0.00) -35(GCCGCCCA,+,0.00) -38(GAAGCCGCCC,-,0.00) -126(GCTGGGACGC,+,0.00) 561_WT_peak_5897 chr5 131133012 131133205 + 34 NA promoter-TSS (NM_133372) promoter-TSS (NM_133372) -352 NM_133372 96459 Hs.591273 NM_133372 HPRD:17233 FNIP1 - folliculin interacting protein 1 protein-coding 0.082902 0.654639 -10(TGGCGGCT,+,0.00) -128(GGCTTCGA,-,0.00),-124(TCGACTCC,+,0.00) 22(CGTACCCG,-,0.00) -71(CCTTGTCAGCCC,+,0.00) -127(GCTTCGACTCCC,-,0.00) 561_WT_peak_6330 chr6 43138899 43139117 + 34 NA promoter-TSS (NM_003131) promoter-TSS (NM_003131) -25 NM_003131 6722 Hs.520140 NM_003131 HPRD:02788 SRF MCM1 serum response factor (c-fos serum response element-binding transcription factor) protein-coding 0.087156 0.675799 -13(CTCCGCCGCC,-,0.00),29(CTCGGCCGCG,-,0.00) -76(AGCGGCCT,-,0.00) -99(GCGCTGGGGCTC,-,0.00) 6(TCCCGGCCCC,+,0.00) -106(GGCGGGGG,+,0.00) -11(CCGCCGCCAGCG,+,0.00) 26(CGTCTCGG,+,0.00) 561_WT_peak_4378 chr2 178129887 178130057 + 34 NA promoter-TSS (NM_006164) promoter-TSS (NM_006164) -113 NM_006164 4780 Hs.744006 NM_006164 HPRD:02732 NFE2L2 NRF2 nuclear factor, erythroid 2-like 2 protein-coding 0.058824 0.672515 -133(CCGGGGTGGGGG,-,0.00),-67(CTCCCTTCCCGG,+,0.00) -153(CCGCCCGA,+,0.00) 561_WT_peak_5780 chr5 66299768 66299814 + 34 NA promoter-TSS (NM_001297651) promoter-TSS (NM_001297651) 191 NR_111908 101928794 Hs.672435 NR_111908 LOC101928794 - uncharacterized LOC101928794 ncRNA 0.086957 0.574468 -146(CGTCCGCG,-,0.00) 561_WT_peak_1417 chr11 76155440 76155901 + 34 NA promoter-TSS (NM_020193) promoter-TSS (NM_020193) -399 NM_001300943 56946 Hs.352588 NM_020193 HPRD:10544 C11orf30 EMSY chromosome 11 open reading frame 30 protein-coding 0.071584 0.560606 -126(AATCGGCT,+,0.00),145(AGCCGATT,-,0.00) 8(TCGACGGC,+,0.00) 247(CGCGTACG,+,0.00) 43(CGTCCCTA,+,0.00) 561_WT_peak_6892 chr7 149119307 149119449 + 34 NA Intergenic Intergenic 38675 NM_015694 27153 Hs.38512 NM_015694 HPRD:13849 ZNF777 - zinc finger protein 777 protein-coding 0.070423 0.678322 -62(GCCGGGCG,+,0.00) -145(GGGGCCTTGGCC,+,0.00) -65(GCGGCCGGGCGG,+,0.00) 561_WT_peak_1323 chr11 62622426 62622540 + 34 NA promoter-TSS (NR_002563) promoter-TSS (NR_002563) 72 NR_002563 9301 NR_002563 ENSG00000255717 SNORD27 RNU27|U27 small nucleolar RNA, C/D box 27 snoRNA 0.000000 0.365217 561_WT_peak_6915 chr7 156433492 156433760 + 34 NA promoter-TSS (NR_026865) promoter-TSS (NR_026865) 185 NM_001184996 140545 Hs.446194 NM_030936 HPRD:11517 RNF32 FKSG33|HSD15|LMBR2 ring finger protein 32 protein-coding 0.104478 0.680297 -144(AGAGGCTT,-,0.00) -159(GGAGTCGA,-,0.00) -70(CGTCCGCG,-,0.00) 5(TAGCGGCG,-,0.00) -40(GCCGGGCCGGCG,+,0.00) -100(GGGCGGGGTC,+,0.00) -32(GGCGATGGCCGC,-,0.00) -65(GCGGCCTCGCTT,+,0.00),-42(GAGCCGGGCCGG,-,0.00) 561_WT_peak_1546 chr12 1099747 1099936 + 34 NA promoter-TSS (NM_001297419) promoter-TSS (NM_001297419) -533 NR_027949 23085 Hs.601216 NM_178039 HPRD:06181 ERC1 Cast2|ELKS|ERC-1|RAB6IP2 ELKS/RAB6-interacting/CAST family member 1 protein-coding 0.105820 0.657895 -4(CCCGCGGC,-,0.00) -137(TGCGCAGC,-,0.00) -135(CGCAGCCCCGCG,-,0.00) -94(CGGCCGCGTT,+,0.00),-45(AAAGCGTCCC,-,0.00) 561_WT_peak_40 chr1 8014028 8014304 + 34 NA Intergenic CpG -7548 NM_007262 11315 Hs.419640 NM_007262 HPRD:03961 PARK7 DJ-1|DJ1|HEL-S-67p parkinson protein 7 protein-coding 0.101449 0.660650 -59(AAGCGACT,+,0.00),82(TAGCGGCT,+,0.00) 68(CGGCGCGA,-,0.00) 43(CGTCGGAT,+,0.00) -107(CCGGCAGGCCGC,-,0.00) 561_WT_peak_1316 chr11 62358812 62359146 + 34 NA exon (NM_022830, exon 1 of 9) exon (NM_022830, exon 1 of 9) 130 NM_022830 64852 Hs.728983 NM_022830 HPRD:15226 TUT1 PAPD2|RBM21|STARPAP|TUTase terminal uridylyl transferase 1, U6 snRNA-specific protein-coding 0.095808 0.588060 163(TAGCCGCT,+,0.00) -107(CGCTTACG,+,0.00) -19(TAGCGACT,-,0.00) 109(TGCGCGGA,-,0.00) -26(GCCGCCATAGCG,+,0.00) 561_WT_peak_5254 chr3 130465874 130466056 + 34 NA promoter-TSS (NM_014602) promoter-TSS (NM_014602) -269 NM_014602 30849 Hs.149032 NM_014602 HPRD:04010 PIK3R4 VPS15|p150 phosphoinositide-3-kinase, regulatory subunit 4 protein-coding 0.005495 0.371585 561_WT_peak_6207 chr6 27560596 27560774 + 34 NA Intergenic Intergenic -101129 NR_038293 100507173 Hs.635987 NR_038292 LINC01012 - long intergenic non-protein coding RNA 1012 ncRNA 0.039326 0.497207 561_WT_peak_6870 chr7 139930709 139930892 + 34 NA Intergenic Intergenic 53739 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 JHDM1D-AS1 - JHDM1D antisense RNA 1 (head to head) ncRNA 0.049180 0.576087 -149(GGGGGCCGTAGG,+,0.00) -161(GCTGGGGGGC,+,0.00) 561_WT_peak_1314 chr11 62323938 62324277 + 34 NA Intergenic Intergenic 3671 NR_037427 100500804 NR_037427 MIR3654 - microRNA 3654 ncRNA 0.020649 0.600000 -164(GCTTCCCCTTTC,-,0.00) 561_WT_peak_4057 chr2 46844304 46844488 + 34 NA promoter-TSS (NM_173074) promoter-TSS (NM_173074) 85 NM_014171 9419 Hs.133998 NM_014171 HPRD:05208 CRIPT SSMDF cysteine-rich PDZ-binding protein protein-coding 0.048913 0.562162 -3(GGAGGAGGCTGG,-,0.00) -20(GGGCCGCTTC,+,0.00) 561_WT_peak_1037 chr10 71905612 71905884 + 34 NA exon (NM_173555, exon 1 of 4) exon (NM_173555, exon 1 of 4) 748 NR_073594 219743 Hs.533655 NM_173555 HPRD:15593 TYSND1 NET41 trypsin domain containing 1 protein-coding 0.106618 0.688645 -38(CCGCGCTCCTCC,+,0.00),-26(TCCACCTCCTCC,+,0.00),37(TCCGCCTCCTCG,+,0.00) -117(GGCGCCGA,-,0.00) -106(GGGAGCCGCAGA,+,0.00) -154(CGCAGCTCAGCG,-,0.00) -53(ACCGCCATGGCT,+,0.00),-51(CGCCATGGCTGG,-,0.00) 561_WT_peak_3716 chr19 33651407 33651612 + 34 NA intron (NM_173479, intron 8 of 10) L2b|LINE|L2 28511 NM_173479 126248 Hs.211046 NM_173479 HPRD:14033 WDR88 PQWD WD repeat domain 88 protein-coding 0.009756 0.543689 -39(CAGACAGGAAGC,+,0.00) 561_WT_peak_5339 chr3 183354731 183354920 + 33 NA intron (NM_017644, intron 1 of 7) intron (NM_017644, intron 1 of 7) 1414 NM_017644 54800 Hs.407709 NM_017644 HPRD:16838 KLHL24 DRE1|KRIP6 kelch-like family member 24 protein-coding 0.052910 0.515789 -154(AGGACCGGAAAA,+,0.00) 561_WT_peak_2154 chr14 24911739 24911926 + 33 NA promoter-TSS (NM_001290293) promoter-TSS (NM_001290293) -173 NM_001290293 56948 Hs.643552 NM_020195 HPRD:16598 SDR39U1 C14orf124|HCDI short chain dehydrogenase/reductase family 39U, member 1 protein-coding 0.048128 0.611702 -124(TCCCCCTCCTCG,+,0.00) -11(AAGCGGAT,+,0.00) -23(GTGCCCTCCCGG,+,0.00) -69(CTTCTCGG,+,0.00) 561_WT_peak_1038 chr10 72338361 72338598 + 33 NA Intergenic Intergenic 24052 NM_001083116 5551 Hs.2200 NM_005041 HPRD:01362 PRF1 FLH2|HPLH2|P1|PFN1|PFP perforin 1 (pore forming protein) protein-coding 0.008439 0.415966 561_WT_peak_5834 chr5 80051548 80051762 + 33 NA intron (NM_002439, intron 12 of 23) intron (NM_002439, intron 12 of 23) -100855 NR_110936 1719 Hs.592364 NM_000791 HPRD:00519 DHFR DHFRP1|DYR dihydrofolate reductase protein-coding 0.014019 0.441860 561_WT_peak_5016 chr3 14473484 14473673 + 33 NA intron (NM_001134367, intron 10 of 22) intron (NM_001134367, intron 10 of 22) 29502 NM_001134368 6533 Hs.529488 NM_003043 HPRD:01734 SLC6A6 TAUT solute carrier family 6 (neurotransmitter transporter), member 6 protein-coding 0.021164 0.600000 -77(GGGCTGGCCCGG,-,0.00) -19(CCTTCCAGTTTC,-,0.00) -76(GGCTGGCCCGGC,-,0.00) -136(GCGCCCTGACTG,+,0.00) 561_WT_peak_1371 chr11 65657944 65658392 + 33 NA 5' UTR (NM_006848, exon 1 of 1) 5' UTR (NM_006848, exon 1 of 1) 293 NM_006848 11007 Hs.66713 NM_006848 HPRD:16101 CCDC85B DIPA coiled-coil domain containing 85B protein-coding 0.118304 0.741648 149(GGAGGCCGAG,+,0.00),270(CGCGGCCGCC,-,0.00) 131(AGAGGCCT,-,0.00) 46(CGCGTGCG,+,0.00) 196(CGGCGCTA,+,0.00) 84(GCCCGACG,-,0.00) -97(CTCAGGCCCCGC,-,0.00),-21(CGCGCGCCCCGC,-,0.00),51(GCGGAGCCGGAG,+,0.00),221(GCGGCGCCTGCG,+,0.00) 103(GGCCGCGGCGGC,-,0.00),143(AGCCATGGAGGC,-,0.00),248(GCGCCTGGCGGC,-,0.00) -16(GCCCCGCCGC,-,0.00) 163(GCGGCCTGGAGG,+,0.00),267(CAGCGCGGCCGC,-,0.00) 561_WT_peak_6953 chr8 27950617 27950837 + 33 NA 5' UTR (NM_018091, exon 1 of 15) 5' UTR (NM_018091, exon 1 of 15) 143 NM_001284225 55140 Hs.491336 NM_018091 HPRD:10936 ELP3 KAT9 elongator acetyltransferase complex subunit 3 protein-coding 0.063636 0.542986 -46(AGGCAGAAGCGG,+,0.00) -115(TTTCCCCG,-,0.00) 561_WT_peak_182 chr1 36851999 36852340 + 33 NA promoter-TSS (NM_032017) promoter-TSS (NM_032017) -641 NM_001282546 83931 Hs.471768 NM_032017 HPRD:11359 STK40 SHIK|SgK495 serine/threonine kinase 40 protein-coding 0.017595 0.538012 7(TCCTCCTCCTCC,+,0.00) -47(AGCGACTA,-,0.00) -48(TAGCGACT,-,0.00) 561_WT_peak_1458 chr11 94822601 94822837 + 33 NA promoter-TSS (NM_015036) promoter-TSS (NM_015036) -255 NM_015036 23052 Hs.167115 NM_015036 ENSG00000149218 ENDOD1 - endonuclease domain containing 1 protein-coding 0.105932 0.708861 -115(GGCGGCCGTG,+,0.00) -158(CGCAGCTCCACG,-,0.00) -121(CACCAGGGCGGC,-,0.00) 561_WT_peak_1015 chr10 65028782 65028798 + 33 NA 5' UTR (NM_001282948, exon 1 of 25) 5' UTR (NM_001282948, exon 1 of 25) 193 NM_001282948 221037 Hs.413416 NM_004241 HPRD:05141 JMJD1C TRIP8 jumonji domain containing 1C protein-coding 0.000000 0.529412 561_WT_peak_1701 chr12 51718029 51718207 + 33 NA promoter-TSS (NM_001290009) promoter-TSS (NM_001290009) -136 NM_016293 51411 Hs.14770 NM_016293 HPRD:05805 BIN2 BRAP-1 bridging integrator 2 protein-coding 0.073034 0.715084 -133(GGAGCAGGCCGG,-,0.00) -78(TCGAGGCC,+,0.00) -162(GCCCGCCCCT,+,0.00),-116(AGGGGCGGGC,-,0.00) -158(GCCCCTCAGCCC,+,0.00) -112(GCGGGCCCGGGG,+,0.00) 561_WT_peak_3663 chr19 15578085 15578258 + 33 NA Intergenic L2c|LINE|L2 -2789 NM_022904 64926 Hs.136979 NM_022904 ENSG00000105122 RASAL3 - RAS protein activator like 3 protein-coding 0.011561 0.477011 561_WT_peak_759 chr1 226927219 226927345 + 33 NA promoter-TSS (NM_002221) promoter-TSS (NM_002221) -406 NM_002221 3707 Hs.528087 NM_002221 HPRD:00942 ITPKB IP3-3KB|IP3K|IP3K-B|IP3KB|PIG37 inositol-trisphosphate 3-kinase B protein-coding 0.015873 0.370079 561_WT_peak_3566 chr19 2236519 2236739 + 33 NA promoter-TSS (NM_007165) promoter-TSS (NM_007165) -187 NM_007165 8175 Hs.115232 NM_007165 HPRD:02877 SF3A2 PRP11|PRPF11|SAP62|SF3a66 splicing factor 3a, subunit 2, 66kDa protein-coding 0.109091 0.665158 -115(GGCGCAGGCGGA,-,0.00) -6(CGCACGCG,-,0.00) -35(CGGACCGA,+,0.00) 10(CTTCCAGGCCGC,-,0.00) 561_WT_peak_6412 chr6 100016412 100016703 + 33 NA 5' UTR (NM_005190, exon 1 of 12) 5' UTR (NM_005190, exon 1 of 12) 133 NM_005190 892 Hs.430646 NM_005190 HPRD:00456 CCNC CycC cyclin C protein-coding 0.103093 0.630137 -63(TCGACTCC,+,0.00),-48(GGCGGCGA,-,0.00) -1(CCGGCCGA,+,0.00) -67(CGGCTCGA,-,0.00) 22(CAAACCCG,+,0.00) 66(GGGAGCCGGAGG,+,0.00) -47(GCGGCGACGGCG,+,0.00) -59(CTCCGCTCCGCG,-,0.00) -134(GGAGCGGCCC,-,0.00) -55(GCTCCGCGGC,-,0.00) 561_WT_peak_7088 chr8 101734660 101734894 + 33 NA promoter-TSS (NM_002568) promoter-TSS (NM_002568) -462 NM_002568 26986 Hs.387804 NM_002568 HPRD:05247 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein, cytoplasmic 1 protein-coding 0.132479 0.753191 -93(GCTTCCGGGTTC,-,0.00),37(CCCTCCGGGCCC,-,0.00),43(GGGCCCGGTTTC,+,0.00) -56(CGCGGCCGCC,-,0.00) -60(CGTGCGCG,-,0.00) -157(GCCCGCCCCT,+,0.00) -128(TTAACCCG,-,0.00) -93(GCTTCCGGGTTC,-,0.00) -108(TGGGCGGT,-,0.00),-58(TGCGCGGC,-,0.00) -27(GGCCGGCCCGGC,-,0.00) -25(CCGGCCCGGCTC,+,0.00) 561_WT_peak_705 chr1 206957849 206958048 + 33 NA Intergenic Intergenic -12109 NM_000572 3586 Hs.193717 NM_000572 HPRD:00495 IL10 CSIF|GVHDS|IL-10|IL10A|TGIF interleukin 10 protein-coding 0.040201 0.590000 2(GGCGGGGG,+,0.00) -6(CCGGGGGCGGCG,+,0.00) 561_WT_peak_1673 chr12 48099956 48100065 + 33 NA promoter-TSS (NM_001146075) promoter-TSS (NM_001146075) -166 NM_024604 79657 Hs.437855 NM_024604 RPAP3 - RNA polymerase II associated protein 3 protein-coding 0.000000 0.381818 561_WT_peak_4517 chr2 239197587 239197871 + 33 NA promoter-TSS (NM_022817) promoter-TSS (NM_022817) -522 NM_022817 8864 Hs.58756 NM_003894 HPRD:04575 PER2 FASPS|FASPS1 period circadian clock 2 protein-coding 0.130282 0.712281 -28(CGGGGAGCGCGG,-,0.00) -72(GGCGTCGG,-,0.00),-68(TCGGCGCC,+,0.00) -119(CGCGTTCG,+,0.00),-11(CGCGTACC,+,0.00) 3(GGCGGGGG,+,0.00) -21(CGCGGAGTGGCG,+,0.00) 4(GCGGGGGAGC,+,0.00) 42(CCGGCCTGGCAG,+,0.00) 561_WT_peak_4428 chr2 200820085 200820423 + 33 NA non-coding (NR_109905, exon 1 of 5) non-coding (NR_109905, exon 1 of 5) 205 NR_109905 129450 Hs.204619 NM_152382 HPRD:08232 TYW5 C2orf60|hTYW5 tRNA-yW synthesizing protein 5 protein-coding 0.091716 0.678466 90(GGTTGCCGAAGG,+,0.00) 129(GCGGGGACGGGG,+,0.00) -61(GGCCATGGTTGC,-,0.00) 561_WT_peak_2459 chr15 44955929 44956295 + 33 NA promoter-TSS (NM_001160227) promoter-TSS (NM_001160227) -236 NM_025137 80208 Hs.656271 NM_025137 HPRD:07963 SPG11 KIAA1840 spastic paraplegia 11 (autosomal recessive) protein-coding 0.043716 0.566757 -74(AGCCACAT,-,0.00) 59(CCTCCAGCTCCC,-,0.00) 561_WT_peak_5605 chr4 143326190 143326408 + 33 NA intron (NM_001101669, intron 6 of 25) GA-rich|Low_complexity|Low_complexity 441305 NM_003866 8821 Hs.531403 NM_003866 HPRD:06322 INPP4B - inositol polyphosphate-4-phosphatase, type II, 105kDa protein-coding 0.022936 0.515982 -91(GGCGGGGG,+,0.00) 561_WT_peak_3309 chr17 63053084 63053376 + 33 NA promoter-TSS (NM_006572) promoter-TSS (NM_006572) -310 NM_006572 10672 Hs.515018 NM_006572 HPRD:05100 GNA13 G13 guanine nucleotide binding protein (G protein), alpha 13 protein-coding 0.089041 0.668942 -158(CGGGGAGGGCTG,-,0.00),-47(CCGGGAGGCCGG,-,0.00) 64(TCGAGGCC,+,0.00) -24(CGGACGCG,-,0.00) 54(CCGACCCA,+,0.00) -13(CTTTGGGCTCCC,-,0.00) -109(ACTTTCTGTTTC,-,0.00) 45(ACCGCCCA,+,0.00) 38(CGCTGTCACCGC,-,0.00) -122(GCTGGGGAGC,+,0.00) 561_WT_peak_6502 chr6 144472531 144472740 + 33 NA intron (NM_003764, intron 1 of 1) intron (NM_003764, intron 1 of 1) 981 NM_003764 8676 Hs.118958 NM_003764 STX11 FHL4|HLH4|HPLH4 syntaxin 11 protein-coding 0.014354 0.428571 561_WT_peak_6630 chr7 27779847 27780036 + 33 NA intron (NM_006024, intron 1 of 16) CpG 227 NM_006024 8887 Hs.34576 NM_006024 HPRD:05618 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 (human T-cell leukemia virus type I) binding protein 1 protein-coding 0.058201 0.636842 -117(GCGCCTCCCCGG,+,0.00) -22(GGGGCCTGGCCG,+,0.00) 561_WT_peak_3506 chr18 48724422 48724591 + 33 NA promoter-TSS (NM_016626) promoter-TSS (NM_016626) -455 NM_016626 51320 Hs.465144 NM_016626 HPRD:15255 MEX3C MEX-3C|RKHD2|RNF194 mex-3 RNA binding family member C protein-coding 0.023669 0.564706 -116(ATGTGGCT,+,0.00),-81(AGCGGCCT,-,0.00) 561_WT_peak_4301 chr2 132250397 132250880 + 33 NA promoter-TSS (NM_001085365) promoter-TSS (NM_001085365) 252 NR_026922 150776 Hs.535622 NR_026922 ENSG00000152117 LOC150776 - sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3) pseudogene pseudo 0.111801 0.698347 257(CGGCCCGGCGGC,+,0.00) 108(TGGCGGCT,+,0.00) 279(CCGGGCAGGCTG,-,0.00) 185(CCGACGCC,+,0.00) 252(TCGGGCGG,-,0.00) 44(CGCCCGGC,-,0.00),50(GCCGCGGG,+,0.00) 133(CGACGCTA,+,0.00) 183(GTCCGACG,-,0.00) 38(TTTTCCCG,-,0.00) 93(GGCGCGGT,-,0.00) 59(CGTGGCTCTGCG,-,0.00) 50(GCCGCGGGGC,+,0.00) 43(CCGCCCGGCCGC,-,0.00),256(GCGGCCCGGCGG,+,0.00) 561_WT_peak_3627 chr19 11546179 11546448 + 33 NA promoter-TSS (NM_001289102) promoter-TSS (NM_001289102) -153 NM_002743 5589 Hs.610830 NM_002743 HPRD:03518 PRKCSH AGE-R2|G19P1|PCLD|PKCSH|PLD1 protein kinase C substrate 80K-H protein-coding 0.070632 0.596296 -100(AGCCGCCA,-,0.00) -155(TCCCGCCCCT,+,0.00) 5(CTCTGGCACCGC,-,0.00) -3(CGTCTCGG,+,0.00) -74(GCTGCGCCGC,+,0.00),-74(GCTGCGCCGC,-,0.00) 561_WT_peak_2489 chr15 55569303 55569494 + 33 NA intron (NM_183235, intron 1 of 6) HAL1|LINE|L1 -6291 NM_183236 5873 Hs.654978 NM_004580 HPRD:04845 RAB27A GS2|HsT18676|RAB27|RAM RAB27A, member RAS oncogene family protein-coding 0.000000 0.385417 561_WT_peak_1232 chr11 20409027 20409351 + 32 NA 5' UTR (NM_001145167, exon 1 of 15) 5' UTR (NM_001145167, exon 1 of 15) 113 NM_005788 10196 Hs.152337 NM_005788 HPRD:11934 PRMT3 HRMT1L3 protein arginine methyltransferase 3 protein-coding 0.151235 0.750769 -155(GGAGGAGGCGGA,-,0.00) -58(CGGCGTTCCCGG,+,0.00) -96(TCGAGGCC,+,0.00) -15(GCCGCGGG,+,0.00) -160(CGGCAGGA,-,0.00) -136(CTCTCGCCCCGC,-,0.00),55(CCCGGTCCCCGC,-,0.00),137(CCCTGGCCCCTC,-,0.00) -13(CGCGGGTTCGCG,-,0.00) 561_WT_peak_6804 chr7 104936096 104936157 + 32 NA intron (NM_001278273, intron 2 of 16) L1MB4|LINE|L1 3100 NM_001278273 6733 Hs.285197 NM_182691 HPRD:04280 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding 0.016393 0.290323 561_WT_peak_6581 chr7 6048960 6049269 + 32 NA promoter-TSS (NM_000535) promoter-TSS (NM_000535) 232 NM_006303 7965 Hs.301613 NM_006303 HPRD:02915 AIMP2 JTV-1|JTV1|P38 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 protein-coding 0.113269 0.725806 34(CGCACGCG,-,0.00) -16(GCCGGGCG,+,0.00),21(CCCCCGCC,-,0.00) -37(CGGCAGGA,-,0.00) -117(CAGGTAAA,+,0.00) 75(CCGGAGCGAGCG,+,0.00) 67(CCCCCAGGCCGG,-,0.00) 561_WT_peak_1632 chr12 26985234 26985448 + 32 NA intron (NM_002223, intron 1 of 56) intron (NM_002223, intron 1 of 56) 790 NM_002223 3709 Hs.512235 NM_002223 HPRD:02536 ITPR2 CFAP48|IP3R2 inositol 1,4,5-trisphosphate receptor, type 2 protein-coding 0.042056 0.511628 561_WT_peak_4718 chr20 61585363 61585805 + 32 NA intron (NM_022082, intron 1 of 12) intron (NM_022082, intron 1 of 12) 1585 NM_022082 63910 Hs.512686 NM_022082 HPRD:12777 SLC17A9 C20orf59|VNUT solute carrier family 17 (vesicular nucleotide transporter), member 9 protein-coding 0.045249 0.598194 106(CCGCCCTCCTGC,+,0.00) 118(AGCCACAT,-,0.00) 133(GCTGGGCCAGGC,+,0.00),192(GCCTGGCCCGGC,-,0.00),197(GCCCGGCCCCGC,-,0.00) 561_WT_peak_709 chr1 207494553 207494785 + 32 NA promoter-TSS (NM_000574) promoter-TSS (NM_000574) -148 NM_000574 1604 Hs.126517 NM_000574 HPRD:00500 CD55 CR|CROM|DAF|TC CD55 molecule, decay accelerating factor for complement (Cromer blood group) protein-coding 0.073276 0.613734 -22(CCCCCTCTCCCG,-,0.00) 13(TAGCGAGG,-,0.00) 51(CGCAGGCCCCAC,-,0.00) -159(CGCGTCTCAGCG,-,0.00) 561_WT_peak_548 chr1 155220531 155220721 + 32 NA intron (NM_198264, intron 5 of 8) intron (NM_198264, intron 5 of 8) 4648 NM_001267608 10712 Hs.348308 NM_006589 HPRD:08511 FAM189B C1orf2|COTE1 family with sequence similarity 189, member B protein-coding 0.031579 0.675393 -164(AGGCACGA,-,0.00) -153(CTCCGACG,-,0.00) -79(TGGGCGGC,-,0.00) 561_WT_peak_2561 chr15 76196068 76196243 + 32 NA promoter-TSS (NM_012170) promoter-TSS (NM_012170) -45 NM_012170 26263 Hs.591115 NM_012170 HPRD:16437 FBXO22 FBX22|FISTC1 F-box protein 22 protein-coding 0.114286 0.619318 -55(CCACCTTCCCCG,+,0.00) -10(GCGCGCCGGCCG,+,0.00) -28(CGCGGACG,+,0.00) 561_WT_peak_3186 chr17 41116400 41116840 + 32 NA promoter-TSS (NM_001261434) promoter-TSS (NM_001261434) -105 NM_001261434 80755 Hs.317403 NM_001261434 HPRD:14524 AARSD1 - alanyl-tRNA synthetase domain containing 1 protein-coding 0.065909 0.535147 -85(CGCACGCG,-,0.00) -53(GAGCGACG,-,0.00) -47(CGTGGGAC,+,0.00) 16(CGGTTTGG,-,0.00) 561_WT_peak_370 chr1 111162172 111162357 + 32 NA intron (NM_001204269, intron 1 of 4) intron (NM_001204269, intron 1 of 4) 11832 NM_001204269 3737 Hs.248139 NM_004974 HPRD:01443 KCNA2 HBK5|HK4|HUKIV|KV1.2|MK2|NGK1|RBK2 potassium voltage-gated channel, shaker-related subfamily, member 2 protein-coding 0.070270 0.623656 -120(TCAACGCC,+,0.00) -158(TCGGGCGG,-,0.00) -58(GCCGCGCC,+,0.00) 561_WT_peak_1002 chr10 61666597 61666787 + 32 NA promoter-TSS (NM_005436) promoter-TSS (NM_005436) -278 NM_005436 8030 Hs.591360 NM_005436 HPRD:09064 CCDC6 D10S170|H4|PTC|TPC|TST1 coiled-coil domain containing 6 protein-coding 0.084211 0.680628 -131(CACGGCCGCC,-,0.00) -110(GGGCTCGCGCCC,-,0.00) -121(CAGCCTCTTCCG,-,0.00),5(CCCCATCTTCCG,-,0.00) -91(GAAAAAGGAAAC,+,0.00) -127(GCCGCCCA,+,0.00) -134(GCCCACGGCCGC,-,0.00) -65(GCCTCGCAGG,-,0.00) 561_WT_peak_7575 chrX 70751934 70752121 + 32 NA promoter-TSS (NM_181672) promoter-TSS (NM_181672) -885 NM_181673 8473 Hs.405410 NM_003605 HPRD:02222 OGT HRNT1|O-GLCNAC O-linked N-acetylglucosamine (GlcNAc) transferase protein-coding 0.016043 0.393617 561_WT_peak_5835 chr5 80597507 80597717 + 32 NA promoter-TSS (NR_034121) promoter-TSS (NR_034121) 210 NM_001131035 84240 Hs.15536 NM_032280 HPRD:15704 ZCCHC9 PPP1R41 zinc finger, CCHC domain containing 9 protein-coding 0.071429 0.672986 -60(TAGCCGCT,+,0.00) -16(GGCGGCGA,-,0.00) 561_WT_peak_3494 chr18 43735940 43736121 + 32 NA Intergenic MamGypLTR1c|LTR|Gypsy -17958 NM_001008239 147339 Hs.116486 NM_145055 HPRD:12690 C18orf25 ARKL1|RNF111L1 chromosome 18 open reading frame 25 protein-coding 0.000000 0.384615 561_WT_peak_5555 chr4 99064683 99064869 + 32 NA promoter-TSS (NM_174952) promoter-TSS (NM_174952) -385 NM_174952 285555 Hs.680226 NM_174952 HPRD:14650 STPG2 C4orf37 sperm-tail PG-rich repeat containing 2 protein-coding 0.075269 0.641711 -161(GGAGGAGGCGGG,-,0.00) -72(TCCCGGCTCT,+,0.00) -61(TTTACCCG,-,0.00) -113(GGGCCGAGCC,+,0.00) 561_WT_peak_6963 chr8 29381710 29381891 + 32 NA Intergenic Intergenic -173533 NM_001394 1846 Hs.417962 NM_001394 HPRD:04123 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding 0.011050 0.423077 561_WT_peak_2791 chr16 30933989 30934229 + 32 NA promoter-TSS (NM_001282351) promoter-TSS (NM_001282351) -267 NM_001282351 54620 Hs.152149 NM_019085 HPRD:12366 FBXL19 CXXC11|Fbl19|JHDM1C F-box and leucine-rich repeat protein 19 protein-coding 0.079167 0.659751 34(GGCGGGCGAG,+,0.00) -143(AGACGCCT,-,0.00),-97(AGCCGCCA,-,0.00) -109(CCCCGGCCCT,+,0.00) -109(CCCCGGCCCTGC,-,0.00),-82(CGGTGGCCCCGC,-,0.00) 561_WT_peak_3109 chr17 29298065 29298367 + 32 NA exon (NM_001184992, exon 1 of 6) exon (NM_001184992, exon 1 of 6) 260 NM_197939 84282 Hs.29874 NM_032322 HPRD:11506 RNF135 MMFD|REUL|Riplet ring finger protein 135 protein-coding 0.119205 0.752475 -155(CCCGGCCGCC,-,0.00) 17(GCGACGCC,+,0.00) -164(CGTCCGCG,-,0.00),126(CGCACGCG,-,0.00) -24(CAGCTTCTGCCG,-,0.00) 58(GCCGCGCA,+,0.00),119(GCCGCGCC,+,0.00) 28(CGCTGGGCCTGC,-,0.00) -46(CCGCCACG,-,0.00),15(CCGCGACG,-,0.00),107(CCGACAAG,-,0.00) -141(GGCCATGGCGGG,-,0.00),47(GCCGCCAGGGCG,+,0.00),49(CGCCAGGGCGCC,-,0.00) 58(GCCGCGCAGC,-,0.00) 48(CCGCCAGGGCGC,-,0.00) 561_WT_peak_6349 chr6 52926528 52926845 + 32 NA promoter-TSS (NM_016513) promoter-TSS (NM_016513) -86 NM_014920 22858 Hs.417022 NM_014920 HPRD:09996 ICK ECO|LCK2|MRK intestinal cell (MAK-like) kinase protein-coding 0.113565 0.694969 49(CGCGGCCGAG,+,0.00) 57(AGCCGCCA,-,0.00) -35(CCGCTTTCCCTG,+,0.00) 141(CCGAACGA,+,0.00) -85(CGGCAGGA,-,0.00) -153(GTCCGGCG,-,0.00) -12(CCTGCAGCTCCC,-,0.00) 2(CGCTGGCCCTGC,-,0.00) -38(CGGCCGCTTT,+,0.00) 58(GCCGCCAGGCGC,+,0.00) 51(CGGCCGAGCCGC,-,0.00) 561_WT_peak_1465 chr11 102322582 102322773 + 32 NA intron (NM_052932, intron 1 of 4) CpG 1098 NM_052932 114908 Hs.503709 NM_052932 ENSG00000152558 TMEM123 KCT3|PORIMIN|PORMIN transmembrane protein 123 protein-coding 0.104712 0.651042 -26(AGCCCCGAAGTC,+,0.00) -73(CCGCGAGGGCGG,-,0.00) -140(TCGGCCGG,-,0.00) -68(AGGGCGGGGC,-,0.00) -161(GCTGCGCA,+,0.00),-159(TGCGCAGC,-,0.00) -101(CCCGCCATGGGG,+,0.00),-99(CGCCATGGGGGC,-,0.00) -161(GCTGCGCAGC,+,0.00),-161(GCTGCGCAGC,-,0.00) 561_WT_peak_5005 chr3 12437150 12437399 + 32 NA intron (NM_005037, intron 4 of 6) intron (NM_005037, intron 4 of 6) 44273 NM_015869 5468 Hs.162646 NM_005037 HPRD:03288 PPARG CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma peroxisome proliferator-activated receptor gamma protein-coding 0.012048 0.396000 561_WT_peak_3758 chr19 39564391 39564566 + 32 NA Intergenic Intergenic -10467 NM_001004318 390928 Hs.448934 NM_001004318 HPRD:13361 PAPL - iron/zinc purple acid phosphatase-like protein protein-coding 0.017143 0.585227 -146(GTCACAGGAAGC,+,0.00) 561_WT_peak_4530 chr2 242576856 242577067 + 32 NA promoter-TSS (NM_178326) promoter-TSS (NM_178326) -66 NM_013325 23192 Hs.283610 NM_013325 HPRD:16499 ATG4B APG4B|AUTL1 autophagy related 4B, cysteine peptidase protein-coding 0.170616 0.735849 -43(TGGCGGCT,+,0.00) -2(TCGCCGCC,+,0.00) -55(CGTACGCC,-,0.00) 28(CCCGCGGC,-,0.00) -108(CGACACGA,-,0.00) -138(CGTCGGAC,+,0.00),-114(GTCCCACG,-,0.00),-67(CGTCGGCC,+,0.00) 561_WT_peak_3979 chr2 20851068 20851277 + 32 NA promoter-TSS (NM_022460) promoter-TSS (NM_022460) -308 NM_022460 64342 Hs.531785 NM_022460 HPRD:13357 HS1BP3 ETM2|HS1-BP3 HCLS1 binding protein 3 protein-coding 0.047847 0.533333 -35(CCCCCTCTGCCC,+,0.00) -113(CTGTTTTG,-,0.00),-45(CAAAACCA,+,0.00) -97(TTTAGCCG,-,0.00) 561_WT_peak_3087 chr17 26645716 26645900 + 32 NA promoter-TSS (NM_014573) promoter-TSS (NM_014573) -313 NM_014573 27346 Hs.199695 NM_014573 HPRD:14343 TMEM97 MAC30 transmembrane protein 97 protein-coding 0.048913 0.567568 -149(CCTCGGGCTCCC,-,0.00) 561_WT_peak_1553 chr12 4252339 4252599 + 32 NA Intergenic Intergenic -130433 NM_001759 894 Hs.376071 NM_001759 HPRD:00451 CCND2 KIAK0002 cyclin D2 protein-coding 0.034615 0.517241 -102(CAAAACCG,+,0.00) 83(GGGAGGCCAAGG,+,0.00) 561_WT_peak_5343 chr3 184016684 184016887 + 32 NA promoter-TSS (NM_002808) promoter-TSS (NM_002808) -101 NM_002808 5708 Hs.518464 NM_002808 HPRD:05870 PSMD2 P97|RPN1|S2|TRAP2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 protein-coding 0.088670 0.656863 -27(CGGGGGAGGCTG,-,0.00) 24(AGGGCGGGGC,-,0.00) 19(GTCCGAGG,-,0.00) -129(ACCGCCCA,+,0.00) 12(GGGCGGGGTC,+,0.00),25(GGGCGGGGCT,+,0.00) 561_WT_peak_1567 chr12 7068202 7068365 + 32 NA intron (NM_080549, intron 11 of 15) intron (NM_080549, intron 11 of 15) -4579 NR_029779 406985 NR_029779 miRBase:MI0000650 MIR200C MIRN200C microRNA 200c ncRNA 0.049080 0.664634 -65(CCGGGGACGCGG,-,0.00) 561_WT_peak_7315 chr9 82208104 82208268 + 32 NA intron (NR_104239, intron 4 of 20) intron (NR_104239, intron 4 of 20) 21498 NR_104239 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|ESG|ESG4|GRG4 transducin-like enhancer of split 4 protein-coding 0.024390 0.418182 -138(GAAAACCG,+,0.00),-125(TGGTTTTG,-,0.00) 561_WT_peak_5607 chr4 143337931 143338039 + 32 NA intron (NM_001101669, intron 5 of 25) intron (NM_001101669, intron 5 of 25) 429619 NM_003866 8821 Hs.531403 NM_003866 HPRD:06322 INPP4B - inositol polyphosphate-4-phosphatase, type II, 105kDa protein-coding 0.009259 0.366972 -131(GGTGTCGA,-,0.00) -141(GGGCTTTGAGGG,-,0.00) 561_WT_peak_573 chr1 159880539 159880576 + 32 NA Intergenic Intergenic -10651 NM_012337 25790 Hs.647705 NM_012337 HPRD:05514 CFAP45 CCDC19|NESG1 cilia and flagella associated protein 45 protein-coding 0.027027 0.552632 561_WT_peak_3349 chr17 74099995 74100179 + 32 NA promoter-TSS (NM_001145298) promoter-TSS (NM_001145298) -219 NM_015219 23265 Hs.514496 NM_015219 HPRD:16292 EXOC7 2-5-3p|EX070|EXO70|EXOC1|Exo70p|YJL085W exocyst complex component 7 protein-coding 0.065217 0.562162 -157(TCGACGCG,+,0.00),-29(GGCGACGA,-,0.00) -125(TCGATCGG,-,0.00) -109(CCCGCGGC,-,0.00) -156(CGACGCGG,+,0.00) 561_WT_peak_74 chr1 16245858 16246047 + 32 NA exon (NM_015001, exon 8 of 15) exon (NM_015001, exon 8 of 15) 56675 NM_001287603 7709 Hs.433764 NM_003443 HPRD:04968 ZBTB17 MIZ-1|ZNF151|ZNF60|pHZ-67 zinc finger and BTB domain containing 17 protein-coding 0.026455 0.426316 -121(GGGTTTTG,-,0.00),0(AGGTTTTG,-,0.00) 561_WT_peak_4131 chr2 70363446 70363515 + 32 NA Intergenic Intergenic -11032 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LOC100133985 - uncharacterized LOC100133985 ncRNA 0.000000 0.428571 561_WT_peak_253 chr1 55681168 55681343 + 32 NA promoter-TSS (NM_015306) promoter-TSS (NM_015306) 174 NR_038320 100507634 Hs.735428 NR_038320 LOC100507634 - uncharacterized LOC100507634 ncRNA 0.131429 0.732955 -78(TCGTCGCC,+,0.00) -161(CGGAGGGAGGGG,+,0.00) -77(CGTCGCCA,+,0.00) -150(GCCGCGCC,+,0.00),-15(GCCGCGCA,+,0.00) -21(CGCAGCGCCGCG,+,0.00),-21(CGCAGCGCCGCG,-,0.00) -152(GGGCCGCGCC,+,0.00) -145(GCCGCGGAGC,+,0.00),-15(GCCGCGCAGC,-,0.00) -109(CAGCCAGGCAGA,-,0.00) 561_WT_peak_529 chr1 151918224 151918390 + 32 NA Intergenic Intergenic -35946 NM_053055 117145 Hs.164070 NM_053055 THEM4 CTMP thioesterase superfamily member 4 protein-coding 0.018072 0.449102 561_WT_peak_2850 chr16 57075367 57075587 + 32 NA exon (NM_032206, exon 17 of 48) exon (NM_032206, exon 17 of 48) 24491 NM_032206 84166 Hs.528836 NM_032206 HPRD:14831 NLRC5 CLR16.1|NOD27|NOD4 NLR family, CARD domain containing 5 protein-coding 0.009091 0.511312 -80(GGGAGGAAGCTG,+,0.00) 561_WT_peak_5132 chr3 56817857 56818100 + 32 NA intron (NM_001289698, intron 2 of 10) intron (NM_001289698, intron 2 of 10) -8233 NM_001128616 50650 Hs.476402 NM_019555 HPRD:12480 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor (GEF) 3 protein-coding 0.000000 0.409836 -132(AAATTGGCCC,-,0.00) 561_WT_peak_1877 chr12 120524860 120525030 + 32 NA intron (NM_207311, intron 7 of 8) CpG 29698 NM_001167606 11021 Hs.524788 NM_006861 HPRD:05010 RAB35 H-ray|RAB1C|RAY RAB35, member RAS oncogene family protein-coding 0.082353 0.666667 -163(TCGGCGCC,+,0.00) -151(GCCGGGGG,+,0.00) 561_WT_peak_6714 chr7 73866868 73866947 + 31 NA Intergenic LTR8A|LTR|ERV1 -1213 NM_005685 9569 Hs.647056 NM_005685 HPRD:08379 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding 0.000000 0.412500 561_WT_peak_3377 chr17 78676943 78677143 + 31 NA intron (NM_020761, intron 3 of 33) intron (NM_020761, intron 3 of 33) 102389 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA 0.030000 0.477612 561_WT_peak_4450 chr2 204756169 204756339 + 31 NA Intergenic MamGypLTR1d|LTR|Gypsy 23743 NM_005214 1493 Hs.247824 NM_005214 HPRD:00474 CTLA4 CD|CD152|CELIAC3|CTLA-4|GRD4|GSE|IDDM12 cytotoxic T-lymphocyte-associated protein 4 protein-coding 0.000000 0.409357 561_WT_peak_71 chr1 15929970 15930147 + 31 NA Intergenic CpG -13895 NM_032341 84301 Hs.718857 NM_032341 DDI2 - DNA-damage inducible 1 homolog 2 (S. cerevisiae) protein-coding 0.079096 0.606742 -42(GGCGTCGC,-,0.00) -13(CGCGGACG,+,0.00) -15(TGCGCGGA,-,0.00) 561_WT_peak_4038 chr2 42068371 42068650 + 31 NA Intergenic CpG -36185 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LOC388942 - uncharacterized LOC388942 ncRNA 0.064516 0.628571 70(AAGTGGCT,+,0.00) -126(CCCGCGGC,-,0.00) -8(CGGTTCTG,-,0.00) 561_WT_peak_7475 chr9 136548804 136548974 + 31 NA intron (NM_007101, intron 17 of 20) intron (NM_007101, intron 17 of 20) -26359 NR_102735 138948 Hs.223858 NR_002783 ENSG00000225756 DBH-AS1 NCRNA00118 DBH antisense RNA 1 ncRNA 0.023529 0.567251 561_WT_peak_3523 chr18 61089880 61090254 + 31 NA promoter-TSS (NM_004869) promoter-TSS (NM_004869) -315 NM_004869 9525 Hs.126550 NM_004869 HPRD:15653 VPS4B SKD1|SKD1B|VPS4-2 vacuolar protein sorting 4 homolog B (S. cerevisiae) protein-coding 0.080214 0.610667 196(GCCGCGGG,+,0.00) -95(GGGTTTTG,-,0.00) 155(TGCGCGGT,-,0.00) 125(CGTCTCGG,+,0.00) -141(GCAGCCTGGCAG,+,0.00),189(CAGTCAGGCCGC,-,0.00) 561_WT_peak_5298 chr3 156806553 156806882 + 31 NA promoter-TSS (NR_034008) promoter-TSS (NR_034008) -953 NR_034008 100498859 Hs.633655 NR_034008 ENSG00000241135 LINC00881 - long intergenic non-protein coding RNA 881 ncRNA 0.069909 0.651515 108(AGGCGGCT,+,0.00) 30(CGGCACGT,-,0.00) -73(GGGCTGGCAGGG,-,0.00),-44(GCCTCCCAGCCC,+,0.00) -105(CGTTTTTG,-,0.00) -156(CGGATAAA,+,0.00) 72(GGGCAGCTTT,+,0.00) -44(GCCTCCCAGC,-,0.00) -75(GCGGGCTGGCAG,+,0.00) 561_WT_peak_4573 chr20 18268716 18268934 + 31 NA promoter-TSS (NM_001282995) promoter-TSS (NM_001282995) -102 NM_001282996 7692 Hs.472221 NM_003434 HPRD:04964 ZNF133 ZNF150|pHZ-13|pHZ-66 zinc finger protein 133 protein-coding 0.082569 0.639269 -163(AGGCGGCT,+,0.00),-138(AGGCCGCT,+,0.00),0(AAGTCGCT,+,0.00) 561_WT_peak_5604 chr4 140780136 140780306 + 31 NA intron (NM_018717, intron 3 of 5) intron (NM_018717, intron 3 of 5) 193299 NM_002413 4258 Hs.81874 NM_002413 HPRD:03436 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding 0.000000 0.403509 561_WT_peak_5718 chr5 43007756 43007955 + 31 NA Intergenic MER61D|LTR|ERV1 11058 NR_034086 648987 Hs.649468 NR_034085 ENSG00000177738 LOC648987 - uncharacterized LOC648987 ncRNA 0.040201 0.530000 -77(AGCGCGCA,+,0.00) 561_WT_peak_5811 chr5 74062854 74063025 + 31 NA non-coding (NR_073403, exon 1 of 7) non-coding (NR_073403, exon 1 of 7) 123 NM_001271665 10412 Hs.482526 NM_014886 HPRD:18191 NSA2 CDK105|HCL-G1|HCLG1|HUSSY29|TINP1 NSA2 ribosome biogenesis homolog (S. cerevisiae) protein-coding 0.070175 0.558140 -160(TCGACGCC,+,0.00) -95(CCGCCTCG,-,0.00) 561_WT_peak_3367 chr17 76355963 76356183 + 31 NA promoter-TSS (NM_003955) promoter-TSS (NM_003955) 87 NM_003955 9021 Hs.527973 NM_003955 HPRD:05006 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding 0.150000 0.800905 -31(TGGCGGCT,+,0.00) -44(CCGGGCGGGCGG,-,0.00),42(CCGCGCTCGCGG,+,0.00) -134(GGGCGCCCGCCC,+,0.00) -45(GCCGGGCG,+,0.00) -3(CGGCAGCAGCGG,+,0.00) -45(GCCGGGCGGGCG,+,0.00) -129(CCCGCCCTGCCC,+,0.00) 2(GCAGCGGAGC,+,0.00) 561_WT_peak_937 chr10 30990729 30990908 + 31 NA intron (NR_036438, intron 5 of 9) intron (NR_036438, intron 5 of 9) 9615 NR_036438 645954 Hs.408581 NR_036438 ENSG00000234814 SVILP1 - supervillin pseudogene 1 pseudo 0.011173 0.455556 -73(AAGTGTCT,+,0.00) -54(TTTATCCG,-,0.00) -34(GAATCAGGCAGC,+,0.00) 561_WT_peak_1194 chr11 6624687 6624867 + 31 NA promoter-TSS (NM_001014795) promoter-TSS (NM_001014795) 103 NM_015324 23378 Hs.652255 NM_015324 RRP8 KIAA0409|NML ribosomal RNA processing 8, methyltransferase, homolog (yeast) protein-coding 0.094444 0.674033 -27(CGACCCGGAAAC,+,0.00) -117(AGGGTCGGGA,-,0.00) -33(CAGAACCG,+,0.00) -149(CCGCCTCG,-,0.00) -150(GCCGCCTCGGCC,+,0.00) 561_WT_peak_18 chr1 1655947 1656128 + 31 NA promoter-TSS (NM_033529) promoter-TSS (NM_033529) -178 NM_033487 984 Hs.651228 NM_001787 HPRD:08909 CDK11B CDC2L1|CDK11|CDK11-p110|CDK11-p46|CDK11-p58|CLK-1|PITSLREA|PK58|p58|p58CDC2L1|p58CLK-1 cyclin-dependent kinase 11B protein-coding 0.143646 0.681319 -150(GGCGCCGA,-,0.00),-137(GCGACGCC,+,0.00),-8(TGGACGCC,+,0.00) -139(GAGCGACG,-,0.00),-58(TAGCGAAG,-,0.00) -107(TGCGCGGA,-,0.00) 561_WT_peak_2121-2 chr14 21852002 21852019 + 31 NA intron (NM_007192, intron 1 of 25) CpG 415 NM_007192 11198 Hs.213724 NM_007192 HPRD:16088 SUPT16H CDC68|FACTP140|SPT16/CDC68 suppressor of Ty 16 homolog (S. cerevisiae) protein-coding 0.000000 0.388889 561_WT_peak_2121 chr14 21851845 21851958 + 31 NA intron (NM_007192, intron 1 of 25) CpG 524 NM_007192 11198 Hs.213724 NM_007192 HPRD:16088 SUPT16H CDC68|FACTP140|SPT16/CDC68 suppressor of Ty 16 homolog (S. cerevisiae) protein-coding 0.088496 0.578947 -60(GGCGCCGA,-,0.00) -80(CTGACCGA,+,0.00) -155(GGGCAGCGTT,+,0.00) 561_WT_peak_3904 chr19 56166974 56167183 + 30 NA intron (NM_001012478, intron 1 of 11) CpG-14459 1662 NM_001012478 11338 Hs.528007 NM_007279 HPRD:01872 U2AF2 U2AF65 U2 small nuclear RNA auxiliary factor 2 protein-coding 0.052632 0.571429 -109(AGCCGTTT,-,0.00) -72(CGCGTACC,+,0.00) -144(GGGCCCCTTT,+,0.00) 561_WT_peak_1183 chr11 819877 820061 + 30 NA intron (NM_020376, intron 2 of 9) CpG-3673 1068 NM_020376 57104 Hs.654697 NM_020376 HPRD:11443 PNPLA2 1110001C14Rik|ATGL|PEDF-R|TTS-2.2|TTS2|iPLA2zeta patatin-like phospholipase domain containing 2 protein-coding 0.125000 0.783784 -21(GGTTCCGGTCCG,-,0.00) -101(GCGGGAAGGCCG,-,0.00) -41(TCGGTGGG,-,0.00) -126(GCCGGGGG,+,0.00),-113(GGCGGGGG,+,0.00),-83(GCCGGGGG,+,0.00),-52(CCCGCGGC,-,0.00) -131(GCGGGGCCGGGG,+,0.00),-88(GCGGGGCCGGGG,+,0.00) -45(CGAGTCGG,+,0.00) -54(GCCCCGCGGC,-,0.00) -109(GGGGGCTGGCGG,+,0.00) 561_WT_peak_4132 chr2 70369166 70369337 + 30 NA Intergenic CpG -16803 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LOC100133985 - uncharacterized LOC100133985 ncRNA 0.099415 0.755814 -96(CCCTCCTCCTCC,+,0.00) -114(CGGTCCTCCCGG,+,0.00) 561_WT_peak_7237 chr9 26956483 26956626 + 30 NA promoter-TSS (NR_121605) promoter-TSS (NR_121605) 183 NM_001099224 80173 Hs.145402 NM_025103 HPRD:09727 IFT74 CCDC2|CMG-1|CMG1 intraflagellar transport 74 protein-coding 0.062937 0.576389 561_WT_peak_4901 chr22 37373637 37373772 + 30 NA Intergenic Intergenic 12415 NR_038954 100506241 Hs.640023 NR_038954 ENSG00000215403 LL22NC01-81G9.3 - uncharacterized protein FLJ39582-like ncRNA 0.007407 0.558824 561_WT_peak_4755 chr21 26945293 26945509 + 30 NA promoter-TSS (NR_030784) promoter-TSS (NR_030784) -891 NR_030784 406947 NR_030784 miRBase:MI0000681 MIR155 MIRN155|miRNA155 microRNA 155 ncRNA 0.000000 0.350230 561_WT_peak_1485 chr11 113644460 113644750 + 30 NA promoter-TSS (NM_004724) promoter-TSS (NM_004724) -120 NM_004724 9183 Hs.503886 NM_004724 HPRD:04902 ZW10 HZW10|KNTC1AP zw10 kinetochore protein protein-coding 0.075862 0.512027 -112(CCCGGAAGGCGA,-,0.00) -74(ACCGCGCC,+,0.00) 561_WT_peak_822 chr1 244463011 244463134 + 30 NA Intergenic Intergenic -52865 NM_001276349 200159 Hs.442703 NM_001012970 HPRD:13168 C1orf100 - chromosome 1 open reading frame 100 protein-coding 0.016260 0.483871 561_WT_peak_3728 chr19 36204013 36204224 + 30 NA intron (NM_014383, intron 1 of 5) intron (NM_014383, intron 1 of 5) 288 NM_014383 27033 Hs.99430 NM_014383 HPRD:12055 ZBTB32 FAXF|FAZF|Rog|TZFP|ZNF538 zinc finger and BTB domain containing 32 protein-coding 0.009479 0.528302 -61(GAGACAGGAGGC,+,0.00) 561_WT_peak_1704 chr12 52418760 52418863 + 30 NA intron (NM_001202233, intron 1 of 7) intron (NM_001202233, intron 1 of 7) 2195 NM_001202233 3164 Hs.524430 NM_002135 HPRD:00744 NR4A1 GFRP1|HMR|N10|NAK-1|NGFIB|NP10|NUR77|TR3 nuclear receptor subfamily 4, group A, member 1 protein-coding 0.038835 0.519231 -160(CTGCACGA,-,0.00) -123(AGGAAGGAGCTG,+,0.00) 561_WT_peak_5748 chr5 54013412 54013593 + 29 NA intron (NR_104658, intron 1 of 2) L1MA9|LINE|L1 -14350 NR_104659 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA 0.005525 0.335165 561_WT_peak_3511 chr18 56338729 56338970 + 29 NA exon (NM_001289967, exon 1 of 2) exon (NM_001289967, exon 1 of 2) 231 NM_173844 10892 Hs.601217 NM_006785 HPRD:06892 MALT1 IMD12|MLT|MLT1 mucosa associated lymphoid tissue lymphoma translocation gene 1 protein-coding 0.136929 0.785124 -108(CGGCTCGGAGGC,+,0.00) 21(CTCGGCCGCC,-,0.00) -17(ATGTCGCT,+,0.00) -63(CGGGGCGGGCGG,-,0.00),26(CCGCCCCCACGG,+,0.00) -150(CCGTGCCG,+,0.00),60(CGGCGCGA,-,0.00) -98(GCGAGCGGAAGG,+,0.00) -110(CGCGGCTCGGAG,-,0.00) 561_WT_peak_2490 chr15 55610929 55611118 + 29 NA promoter-TSS (NM_004855) promoter-TSS (NM_004855) -110 NM_004855 9488 Hs.612814 NM_004855 HPRD:04988 PIGB GPI-MT-III|PIG-B phosphatidylinositol glycan anchor biosynthesis, class B protein-coding 0.031746 0.400000 561_WT_peak_2155 chr14 25103483 25103677 + 29 NA promoter-TSS (NM_004131) promoter-TSS (NM_004131) -148 NM_004131 3002 Hs.1051 NM_004131 HPRD:00476 GZMB CCPI|CGL-1|CGL1|CSP-B|CSPB|CTLA1|CTSGL1|HLP|SECT granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) protein-coding 0.005155 0.507692 561_WT_peak_4651 chr20 44992806 44993007 + 29 NA intron (NM_001281460, intron 1 of 10) CpG 191 NM_015945 51006 Hs.593344 NM_015945 HPRD:15371 SLC35C2 BA394O2.1|C20orf5|CGI-15|OVCOV1 solute carrier family 35 (GDP-fucose transporter), member C2 protein-coding 0.079602 0.747525 -95(CCGGGGAGGGGC,-,0.00),12(CCGGGAGGCCGG,-,0.00) -19(CAGCCCCGGCCC,+,0.00) -58(CCCGCGCA,+,0.00) -16(CCCCGGCCCCCC,-,0.00) -11(GCCCCCCAGC,-,0.00) 561_WT_peak_2400 chr15 22423178 22423363 + 29 NA Intergenic L1PA13|LINE|L1 9808 NR_028067 390539 Hs.666555 NR_028067 ENSG00000259435 OR4N3P OR15-2 olfactory receptor, family 4, subfamily N, member 3 pseudogene pseudo 0.000000 0.446237 -14(GGGCTGACAGGA,-,0.00) 561_WT_peak_4425 chr2 198380837 198381009 + 29 NA promoter-TSS (NM_001204094) promoter-TSS (NM_001204094) -99 NM_001204094 25843 Hs.633165 NM_015387 HPRD:10165 MOB4 2C4D|MOB1|MOB3|MOBKL3|PHOCN|PREI3 MOB family member 4, phocein protein-coding 0.087209 0.710983 -25(GGGCTGGGGCAC,-,0.00) -111(CTTGTCGG,+,0.00),-42(CGAGGCGG,+,0.00) -45(GGCCGAGGCGGC,-,0.00) -31(GCGGGCGGGCTG,+,0.00) 561_WT_peak_1960 chr13 25861523 25861745 + 29 NA promoter-TSS (NM_004685) promoter-TSS (NM_004685) 70 NM_004685 9107 Hs.643702 NM_004685 HPRD:11946 MTMR6 - myotubularin related protein 6 protein-coding 0.103604 0.699552 1(GGAGGAGGCCGG,-,0.00) -52(AGCGGCTT,-,0.00) -103(GCGGCCTCCCGG,+,0.00),-102(CGGCCTCCCGGG,+,0.00) -106(CCCGCGGC,-,0.00) -38(TCGTCCCG,+,0.00) -48(GCTTGCTGGTTC,-,0.00) 32(CGAGGCGG,+,0.00) 561_WT_peak_2888 chr16 70323219 70323399 + 29 NA promoter-TSS (NM_001257174) promoter-TSS (NM_001257174) 103 NM_001605 16 Hs.315137 NM_001605 HPRD:03042 AARS CMT2N alanyl-tRNA synthetase protein-coding 0.077778 0.718232 -20(CCCCCGCC,-,0.00) -110(GCGGGCCCAGCC,+,0.00) -17(CCGCCAAG,-,0.00) -18(CCCGCCAAGGGC,+,0.00) -134(GCTGCGGAGC,+,0.00) 561_WT_peak_1728 chr12 56583553 56583642 + 29 NA promoter-TSS (NM_003075) promoter-TSS (NM_003075) -246 NM_003075 6601 Hs.236030 NM_003075 HPRD:03437 SMARCC2 BAF170|CRACC2|Rsc8 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 protein-coding 0.078652 0.655556 -138(CCTCGCTA,+,0.00) 561_WT_peak_2630 chr15 100346542 100347018 + 29 NA intron (NR_003260, intron 1 of 4) CpG 352 NR_003260 196968 Hs.567763 NM_194295 HPRD:13192 DNM1P46 C15orf51|DNM1DN14.2|DNM1DN14@ DNM1 pseudogene 46 pseudo 0.102941 0.675052 -67(CTCGGCCTCC,-,0.00) 35(GGCGTCGG,-,0.00),286(GGCGTCTA,-,0.00) 39(TCGGTCGC,-,0.00),168(TCGGCCGG,-,0.00) -159(CGCCCGGC,-,0.00),-25(CGCCCGGC,-,0.00),171(GCCGGGCG,+,0.00) 37(CGTCGGTC,+,0.00) -121(TTTCCCCG,-,0.00) 215(CCTTCCGCGCCC,-,0.00) 69(GCCGCGCA,+,0.00) 73(CGCAGCTCCCCG,-,0.00),151(GGCGAAGCCGCG,+,0.00) -71(CCGCCTCG,-,0.00) 69(GCCGCGCAGC,-,0.00) 561_WT_peak_6105 chr6 13428599 13428799 + 29 NA intron (NM_018988, intron 1 of 1) intron (NM_018988, intron 1 of 1) -20330 NM_001242630 54438 Hs.484686 NM_018988 HPRD:13574 GFOD1 ADG-90|C6orf114 glucose-fructose oxidoreductase domain containing 1 protein-coding 0.045000 0.587065 -120(GGAGGAGGGGGT,-,0.00) -122(CGGGAGGAGGGG,+,0.00) -127(CGAGGCGG,+,0.00) 561_WT_peak_1798 chr12 93322792 93322969 + 29 NA 5' UTR (NM_003566, exon 1 of 29) 5' UTR (NM_003566, exon 1 of 29) 227 NM_003566 8411 Hs.567367 NM_003566 HPRD:05460 EEA1 MST105|MSTP105|ZFYVE2 early endosome antigen 1 protein-coding 0.090395 0.662921 -10(CCGGGAAGGAGG,-,0.00) -25(TGGGCCGGGA,-,0.00) -24(GGGCCGGGAGGG,-,0.00) -69(TGCGCGGG,-,0.00),-43(TGCGCGGG,-,0.00) -53(CTACTCGG,+,0.00) -96(GCGCCGCCGC,-,0.00) 561_WT_peak_6134 chr6 25992869 25993094 + 29 NA Intergenic CpG 25059 NM_005325 3024 Hs.150206 NM_005325 HPRD:00820 HIST1H1A H1.1|H1A|H1F1|HIST1 histone cluster 1, H1a protein-coding 0.071111 0.654867 -134(TCGCCCTGCGCG,+,0.00) -125(GCGCCTCCCCGC,+,0.00) -162(GGGCGCCAGCGC,+,0.00) -20(GCCGCGCC,+,0.00) -126(CGCGCCTCCCCG,-,0.00) 561_WT_peak_1896 chr12 122028619 122028790 + 29 NA Intergenic Intergenic -9784 NM_032590 84678 Hs.524800 NM_032590 HPRD:12362 KDM2B CXXC2|FBXL10|Fbl10|JHDM1B|PCCX2 lysine (K)-specific demethylase 2B protein-coding 0.005848 0.482558 561_WT_peak_2685 chr16 5083708 5083906 + 29 NA non-coding (NR_038913, exon 1 of 2) non-coding (NR_038913, exon 1 of 2) 104 NR_038913 100507589 Hs.729936 NR_038913 NAGPA-AS1 - NAGPA antisense RNA 1 ncRNA 0.101010 0.713568 -131(GGCGGCCGTG,+,0.00) -36(TCGAGGCC,+,0.00) -29(CGCCGGAC,+,0.00) -156(CGTCGCGG,+,0.00),-41(CCGAGTCG,-,0.00) 561_WT_peak_1633 chr12 27175574 27175824 + 29 NA non-coding (NR_073464, exon 1 of 4) non-coding (NR_073464, exon 1 of 4) 244 NR_073463 9412 Hs.286145 NM_004264 HPRD:09156 MED21 SRB7|SURB7|hSrb7 mediator complex subunit 21 protein-coding 0.068000 0.597610 -9(GCCGGGCG,+,0.00) -123(AAAGGGGCCC,-,0.00) 561_WT_peak_7511-2 chrX 21858209 21858302 + 29 NA intron (NM_015884, intron 1 of 10) intron (NM_015884, intron 1 of 10) 599 NM_015884 51360 Hs.443490 NM_015884 HPRD:02243 MBTPS2 BRESEK|IFAP|KFSD|KFSDX|OLMSX|S2P membrane-bound transcription factor peptidase, site 2 protein-coding 0.010753 0.457447 561_WT_peak_10 chr1 1209111 1209344 + 29 NA promoter-TSS (NM_058167) promoter-TSS (NM_058167) 7 NM_058167 118424 Hs.191987 NM_058167 HPRD:15600 UBE2J2 NCUBE-2|NCUBE2|PRO2121 ubiquitin-conjugating enzyme E2, J2 protein-coding 0.141631 0.756410 -28(GCTTCCGGTGCG,-,0.00) -110(CCCACCGA,+,0.00) -20(TGCGCGGT,-,0.00),41(ACCGCGCC,+,0.00) -153(GCGGGGCCCGCG,+,0.00),-91(CGCCGCCGCCGC,-,0.00),-88(CGCCGCCGCCGC,-,0.00) -92(GCGCCGCCGC,-,0.00) 561_WT_peak_2249 chr14 62061181 62061388 + 29 NA intron (NR_039985, intron 1 of 2) intron (NR_039985, intron 1 of 2) -23913 NR_110416 101927780 Hs.254789 NR_110416 ENSG00000250548 LOC101927780 - uncharacterized LOC101927780 ncRNA 0.000000 0.418269 561_WT_peak_2648 chr16 1429387 1429557 + 29 NA intron (NM_001193388, intron 10 of 14) CpG 212 NM_001276414 64718 Hs.643536 NM_023076 HPRD:15612 UNKL C16orf28|ZC3H5L|ZC3HDC5L unkempt family zinc finger-like protein-coding 0.141176 0.771930 -113(CCGAGAAGGCGA,-,0.00) -105(GCGACGCC,+,0.00) -132(CGCCCGGC,-,0.00),-59(CCCGCGGC,-,0.00),-15(GGCGGGGG,+,0.00) -162(CGGCCCGA,-,0.00) -99(CCTTCGCCTCGC,-,0.00) -44(CCCGGCTCCGTG,-,0.00) -113(CCGAGAAG,-,0.00) -148(GCTGGGAAGC,+,0.00) 561_WT_peak_6308 chr6 36563235 36563292 + 29 NA intron (NR_036610, intron 1 of 6) L1MB5|LINE|L1 1173 NM_003017 6428 Hs.405144 NM_003017 SRSF3 SFRS3|SRp20 serine/arginine-rich splicing factor 3 protein-coding 0.017544 0.568966 561_WT_peak_7511 chrX 21857999 21858112 + 29 NA intron (NM_015884, intron 1 of 10) CpG 399 NM_015884 51360 Hs.443490 NM_015884 HPRD:02243 MBTPS2 BRESEK|IFAP|KFSD|KFSDX|OLMSX|S2P membrane-bound transcription factor peptidase, site 2 protein-coding 0.115044 0.701754 -155(GCGCCTCCCGGG,+,0.00) -75(GCCGCGGG,+,0.00) -109(GGATCGGCCC,-,0.00) 561_WT_peak_4833 chr22 19419908 19420196 + 29 NA promoter-TSS (NM_003325) promoter-TSS (NM_003325) 16 NM_003776 64976 Hs.431307 NM_003776 MRPL40 MRP-L22|MRPL22|NLVCF|URIM mitochondrial ribosomal protein L40 protein-coding 0.131944 0.743945 98(CGCGTGCG,+,0.00) -163(TGCGCAGC,-,0.00) -127(GCGGGGACAGGC,+,0.00) -148(CTAGGCGG,+,0.00),48(CCGACTAG,-,0.00) 2(AGCCATGACGGC,-,0.00) -115(GCGTCCCAGC,-,0.00),20(GCTGCGAAGT,+,0.00) 561_WT_peak_6297 chr6 33872179 33872356 + 29 NA Intergenic Intergenic 5355 NR_106982 102466816 NR_106982 MIR7159 hsa-mir-7159 microRNA 7159 ncRNA 0.011299 0.567416 -141(ACTGCGCA,+,0.00) 561_WT_peak_1986 chr13 33112891 33113079 + 29 NA promoter-TSS (NM_014887) promoter-TSS (NM_014887) 37 NM_001278432 10443 Hs.507680 NM_014887 HPRD:15119 N4BP2L2 92M18.3|CG005|PFAAP5 NEDD4 binding protein 2-like 2 protein-coding 0.085106 0.550265 -137(CGTACGCA,-,0.00) -28(CGGCACGG,-,0.00) -60(GTCCGACG,-,0.00) 561_WT_peak_2354 chr14 98444440 98444604 + 28 NA promoter-TSS (NR_015430) promoter-TSS (NR_015430) -61 NR_015430 388011 Hs.651477 NR_015430 ENSG00000246223 C14orf64 - chromosome 14 open reading frame 64 ncRNA 0.036585 0.557576 -94(AAACGCTT,-,0.00) -152(CCTCCGGCTCTC,-,0.00) 561_WT_peak_6174 chr6 26474458 26474627 + 28 NA intron (NR_038992, intron 3 of 3) MER57C2|LTR|ERV1 8195 NR_038992 285819 Hs.575357 NR_038992 LOC285819 - uncharacterized LOC285819 ncRNA 0.029586 0.500000 -153(TCAGTCGG,-,0.00) 561_WT_peak_6203 chr6 27441118 27441288 + 28 NA promoter-TSS (NM_007149) promoter-TSS (NM_007149) -306 NM_007149 7738 Hs.158174 NM_007149 HPRD:03785 ZNF184 - zinc finger protein 184 protein-coding 0.047059 0.502924 -92(GGAGGCCGAG,+,0.00) -135(CTGACCGA,+,0.00) -24(CGTCTCTA,+,0.00) 561_WT_peak_6536 chr6 159065265 159065451 + 28 NA intron (NM_001291603, intron 1 of 4) CpG 460 NM_006519 6993 Hs.445999 NM_006519 HPRD:15987 DYNLT1 CW-1|TCTEL1|tctex-1 dynein, light chain, Tctex-type 1 protein-coding 0.118280 0.764706 -32(CGGGCCGGAGGC,+,0.00) -128(CCCGGCCGCC,-,0.00) -106(AGGCTGGGGCTG,-,0.00),-100(GGGCTGGGGCTG,-,0.00) -137(CGCTCCCAGCCC,+,0.00) -121(GCCGCGCC,+,0.00) -131(CAGCCCGGCCGC,-,0.00) 561_WT_peak_4798 chr21 40138968 40139188 + 28 NA intron (NR_027065, intron 1 of 6) intron (NR_027065, intron 1 of 6) 1820 NR_027066 400866 Hs.278704 NM_001001789 HPRD:10744 LINC00114 C21orf24|NCRNA00114 long intergenic non-protein coding RNA 114 ncRNA 0.036364 0.565611 41(TTTACCCC,-,0.00) -88(CGCGGCTCTGCA,-,0.00) -84(GCTCTGCAGC,-,0.00) 561_WT_peak_651 chr1 184020906 184021122 + 28 NA exon (NM_001127394, exon 1 of 4) exon (NM_001127394, exon 1 of 4) 229 NR_125335 116461 Hs.548197 NM_052965 HPRD:12292 TSEN15 C1orf19|sen15 TSEN15 tRNA splicing endonuclease subunit protein-coding 0.078704 0.677419 -29(GGAGCAGGGCGC,-,0.00) -141(AGCGGCCT,-,0.00) -152(CCCCCGGC,-,0.00) -109(TGGCGACG,-,0.00) -115(CGGCTTTG,-,0.00) -127(GGGCGGTGTT,+,0.00) -140(GCGGCCTGGGTC,+,0.00) 561_WT_peak_6369 chr6 71122727 71122984 + 28 NA promoter-TSS (NM_001105531) promoter-TSS (NM_001105531) -252 NM_020819 57579 Hs.211700 NM_020819 HPRD:11144 FAM135A KIAA1411 family with sequence similarity 135, member A protein-coding 0.058366 0.523256 -90(AAACGGCT,+,0.00) -149(TCTACCCG,-,0.00),-87(CGGCTAAA,+,0.00) 561_WT_peak_1965 chr13 26760737 26760925 + 28 NA Intergenic CpG 35063 NM_183044 6049 Hs.136885 NM_005977 HPRD:05027 RNF6 - ring finger protein (C3H2C3 type) 6 protein-coding 0.106383 0.629630 -149(CTCGGCCGCC,-,0.00) -39(GAGCGCCGGCTC,+,0.00) -22(AGGGCAGGGA,-,0.00) -108(CGGCGCTA,+,0.00) -36(CGCCGGCTCCGG,-,0.00) 561_WT_peak_27 chr1 2488049 2488349 + 28 NA intron (NM_003820, intron 1 of 7) intron (NM_003820, intron 1 of 7) 251 NR_037844 115110 Hs.132272 NR_026927 LOC115110 - uncharacterized LOC115110 ncRNA 0.040000 0.667774 66(GGCGTCCA,-,0.00) -62(CAAAACCG,+,0.00) 100(CGGGTCAA,+,0.00) 561_WT_peak_6264 chr6 30525123 30525378 + 28 NA 5' UTR (NM_005275, exon 1 of 12) 5' UTR (NM_005275, exon 1 of 12) 121 NM_005275 2794 Hs.83147 NM_005275 HPRD:00879 GNL1 HSR1 guanine nucleotide binding protein-like 1 protein-coding 0.054902 0.628906 47(CGCACGCG,-,0.00) -156(CGAAAGAAGCAG,+,0.00) -53(GGTCTGGGAGGG,-,0.00) 561_WT_peak_3872 chr19 50879583 50879968 + 28 NA promoter-TSS (NM_007121) promoter-TSS (NM_007121) 95 NM_001256647 7376 Hs.432976 NM_007121 HPRD:02660 NR1H2 LXR-b|LXRB|NER|NER-I|RIP15|UNR nuclear receptor subfamily 1, group H, member 2 protein-coding 0.085714 0.616580 -79(CGGACCGGAAGT,+,0.00) 152(CGCGTACT,+,0.00) 212(CCCGCGGC,-,0.00) -12(CGGAAGAAGTGG,+,0.00) 26(TAGCGGCG,-,0.00) -146(TCTACCCG,-,0.00),-141(CCGGTAAA,+,0.00) 106(GGGAGACGCAGG,+,0.00) -24(GGGCGGGGTT,+,0.00) 137(CTTCTCGG,+,0.00) 561_WT_peak_2488 chr15 55559712 55559954 + 28 NA intron (NM_183234, intron 1 of 6) intron (NM_183234, intron 1 of 6) 2651 NM_183234 5873 Hs.654978 NM_004580 HPRD:04845 RAB27A GS2|HsT18676|RAB27|RAM RAB27A, member RAS oncogene family protein-coding 0.012397 0.390947 561_WT_peak_4850 chr22 21983457 21983634 + 28 NA intron (NM_001017964, intron 3 of 4) CpG-17595 795 NM_001017964 150223 Hs.355952 NM_001017964 HPRD:18559 YDJC - YdjC homolog (bacterial) protein-coding 0.084746 0.679775 -99(GGCATCGA,-,0.00) 3(CGTCCGCG,-,0.00) -140(GGGCGGAGCGGG,-,0.00) 561_WT_peak_6655 chr7 44079959 44080220 + 28 NA non-coding (NR_015401, exon 2 of 3) non-coding (NR_015401, exon 2 of 3) 133 NR_024116 401331 Hs.530089 NR_024116 RASA4CP RASA4P RAS p21 protein activator 4C, pseudogene pseudo 0.091954 0.740458 81(CGCGCACG,+,0.00),83(CGCACGCG,-,0.00) -9(GCCCGCCCCT,+,0.00) 56(TCGTGCTG,+,0.00) -90(CCTTAGGCTCCG,-,0.00) -34(GCTCCCTGGTTC,-,0.00) 17(AACCCGGCCC,-,0.00) 561_WT_peak_2008 chr13 41635547 41635766 + 28 NA promoter-TSS (NM_007187) promoter-TSS (NM_007187) -41 NM_007187 11193 Hs.411300 NM_007187 HPRD:16086 WBP4 FBP21 WW domain binding protein 4 protein-coding 0.095890 0.640909 -25(AGGTGTCT,+,0.00) -95(CGAACGCG,-,0.00) 9(TCGGGCGG,-,0.00) 32(TCGTCCCG,+,0.00) -47(CGCTGGTCCCGG,-,0.00) 561_WT_peak_915 chr10 22971288 22971472 + 28 NA intron (NM_005028, intron 1 of 9) intron (NM_005028, intron 1 of 9) 32123 NM_005028 5305 Hs.57079 NM_005028 HPRD:11931 PIP4K2A PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK phosphatidylinositol-5-phosphate 4-kinase, type II, alpha protein-coding 0.000000 0.335135 561_WT_peak_4152 chr2 74699693 74700094 + 28 NA promoter-TSS (NM_053050) promoter-TSS (NM_053050) 49 NM_053050 116540 Hs.534527 NM_053050 MRPL53 L53MT mitochondrial ribosomal protein L53 protein-coding 0.074813 0.567164 -60(CGCCCCGGAAGA,+,0.00) -46(TCGTGCAG,+,0.00),108(CGGCACAA,-,0.00) 123(GGGAGCCCAAAG,+,0.00) -77(GCTGCCATGGTG,+,0.00) 561_WT_peak_186 chr1 38325069 38325213 + 28 NA intron (NM_005955, intron 1 of 10) intron (NM_005955, intron 1 of 10) 151 NM_005955 4520 Hs.471991 NM_005955 HPRD:02546 MTF1 MTF-1|ZRF metal-regulatory transcription factor 1 protein-coding 0.055556 0.593103 -83(CCGCGCCTCCCG,-,0.00) -96(GGGAGCCTAAGT,+,0.00) 561_WT_peak_5526 chr4 84047092 84047161 + 28 NA Intergenic AluSz|SINE|Alu -11215 NM_001130715 51316 Hs.546392 NM_016619 HPRD:06335 PLAC8 C15|DGIC|onzin placenta-specific 8 protein-coding 0.014493 0.428571 561_WT_peak_4373 chr2 175499283 175499385 + 28 NA promoter-TSS (NM_003387) promoter-TSS (NM_003387) -27 NM_003387 7456 Hs.128067 NM_003387 HPRD:03835 WIPF1 PRPL-2|WASPIP|WIP WAS/WASL interacting protein family, member 1 protein-coding 0.029412 0.495146 561_WT_peak_7128 chr8 123931253 123931491 + 28 NA intron (NM_014943, intron 2 of 3) intron (NM_014943, intron 2 of 3) 123291 NM_024295 79139 Hs.241576 NM_024295 HPRD:12302 DERL1 DER-1|DER1 derlin 1 protein-coding 0.008403 0.485356 561_WT_peak_5755 chr5 54830488 54830711 + 28 NA promoter-TSS (NR_001575) promoter-TSS (NR_001575) -229 NR_001575 379013 Hs.745164 NR_001575 RNF138P1 - ring finger protein 138, E3 ubiquitin protein ligase pseudogene 1 pseudo 0.125561 0.758929 -145(GGCGGCCGAG,+,0.00) -152(GCGGGACGGCGG,-,0.00) -116(GGGCCGGGGCTG,-,0.00) 30(TAGTGCCG,+,0.00) -106(TGGCGACG,-,0.00) -83(CCCTCCCAGCCG,+,0.00),-49(GGGCTGAGACCG,-,0.00),3(CCCTCACAGCCC,+,0.00) -38(GGGCGGCGCT,+,0.00) 561_WT_peak_6099 chr6 11224783 11224968 + 28 NA intron (NM_001142393, intron 2 of 7) intron (NM_001142393, intron 2 of 7) 8040 NM_182966 4739 Hs.37982 NM_006403 HPRD:11888 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding 0.016216 0.430108 561_WT_peak_6298 chr6 34150617 34150830 + 27 NA Intergenic MLT1K|LTR|ERVL-MaLR -27324 NM_001256809 2914 Hs.429018 NM_000841 HPRD:04978 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate receptor, metabotropic 4 protein-coding 0.009390 0.523364 561_WT_peak_6496 chr6 141130859 141131029 + 27 NA Intergenic L1MB8|LINE|L1 125993 NR_039675 100616180 NR_039675 miRBase:MI0016816 MIR4465 - microRNA 4465 ncRNA 0.005882 0.403509 -121(CAAAACCA,+,0.00) 561_WT_peak_6550 chr6 161695075 161695242 + 27 NA promoter-TSS (NM_020133) promoter-TSS (NM_020133) -51 NM_020133 56895 Hs.353175 NM_020133 HPRD:12437 AGPAT4 1-AGPAT4|LPAAT-delta|dJ473J16.2 1-acylglycerol-3-phosphate O-acyltransferase 4 protein-coding 0.023952 0.470238 561_WT_peak_366 chr1 110527309 110527495 + 27 NA promoter-TSS (NM_006621) promoter-TSS (NM_006621) 15 NM_001242673 10768 Hs.743973 NM_006621 HPRD:07613 AHCYL1 DCAL|IRBIT|PPP1R78|PRO0233|XPVKONA adenosylhomocysteinase-like 1 protein-coding 0.102151 0.673797 -140(TCCCCCTCCCGG,+,0.00),-139(CCCCCTCCCGGG,+,0.00) -148(CCGCCTCTTCCC,-,0.00) 1(CGTCGCTG,+,0.00) 561_WT_peak_3548 chr19 572190 572375 + 27 NA promoter-TSS (NM_001728) promoter-TSS (NM_001728) -172 NM_001728 682 Hs.501293 NM_001728 HPRD:00176 BSG 5F7|CD147|EMMPRIN|M6|OK|TCSF basigin (Ok blood group) protein-coding 0.075676 0.596774 4(CCGCGTCCCCGC,+,0.00) 561_WT_peak_3565 chr19 2096276 2096446 + 27 NA promoter-TSS (NM_130807) promoter-TSS (NM_130807) -92 NM_130807 126308 Hs.744938 NM_130807 HPRD:17583 MOB3A MOB1C|MOBKL2A|moblak MOB kinase activator 3A protein-coding 0.158824 0.760234 -164(CTCGGCCGCC,-,0.00),-155(CTCAGCCGCC,-,0.00) -87(CCGACCGC,+,0.00) -113(GCCGCGGG,+,0.00) -39(TCCGCGCA,+,0.00) -45(CGGGGCTCCGCG,-,0.00) -142(CCGCCTCG,-,0.00) -140(GCCTCGCAGC,-,0.00) 561_WT_peak_5964 chr5 141303083 141303356 + 27 NA promoter-TSS (NM_014773) promoter-TSS (NM_014773) -166 NM_001142603 9812 Hs.210532 NM_014773 HPRD:13780 KIAA0141 DELE KIAA0141 protein-coding 0.080586 0.678832 -89(AAGCCGCT,+,0.00) -86(CCGCTCCAGCCC,+,0.00) -153(AGGGCCTGGA,-,0.00) 61(CGCTGGCCCCGA,-,0.00) 561_WT_peak_5618 chr4 151749402 151749532 + 27 NA exon (NM_001199282, exon 30 of 57) exon (NM_001199282, exon 30 of 57) 186952 NM_001199282 987 Hs.480938 NM_006726 HPRD:07344 LRBA BGL|CDC4L|CVID8|LAB300|LBA LPS-responsive vesicle trafficking, beach and anchor containing protein-coding 0.023077 0.450382 561_WT_peak_5793 chr5 69006633 69006966 + 27 NA promoter-TSS (NR_027386).2 promoter-TSS (NR_027386).2 -445 NR_027386 653188 Hs.631974 NR_027386 ENSG00000253203 GUSBP3 - glucuronidase, beta pseudogene 3 pseudo 0.102102 0.742515 -23(GGTTCCGGCCCG,-,0.00) 124(GGCGCCGA,-,0.00) -143(CGGCGCCAGCCG,+,0.00) -134(CCGACCGC,+,0.00) 26(CCCGCTCAGGCC,+,0.00) -153(CCAGGGCCGGCG,+,0.00),-144(GCGGCGCCAGCC,+,0.00),-118(GCGGGGCGCGCC,+,0.00),-82(CGCTGAGCCCGC,-,0.00),95(GCGCGGCCAGAG,+,0.00) 561_WT_peak_714 chr1 208046721 208046891 + 26 NA Intergenic Intergenic 37877 NM_001025109 947 Hs.374990 NM_001773 HPRD:00790 CD34 - CD34 molecule protein-coding 0.005882 0.485380 561_WT_peak_4331 chr2 152266345 152266579 + 26 NA promoter-TSS (NM_001177664) promoter-TSS (NM_001177664) 62 NM_001177664 55183 Hs.655671 NM_018151 HPRD:10603 RIF1 - replication timing regulatory factor 1 protein-coding 0.068376 0.629787 -93(AGCCGCCA,-,0.00) -62(CGCACGCG,-,0.00) -116(CCCGCGCA,+,0.00) 561_WT_peak_4441 chr2 202125348 202125364 + 26 NA intron (NM_033356, intron 1 of 7) intron (NM_033356, intron 1 of 7) 133 NM_033356 841 Hs.599762 NM_001228 HPRD:03459 CASP8 ALPS2B|CAP4|Casp-8|FLICE|MACH|MCH5 caspase 8, apoptosis-related cysteine peptidase protein-coding 0.000000 0.411765 561_WT_peak_1852 chr12 110906254 110906428 + 26 NA promoter-TSS (NM_001164373) promoter-TSS (NM_001164373) 109 NM_013300 29902 Hs.436618 NM_013300 HPRD:17119 FAM216A C12orf24|HSU79274 family with sequence similarity 216, member A protein-coding 0.057471 0.514286 -90(TCGGTCCG,-,0.00) 561_WT_peak_2356 chr14 99398498 99398642 + 26 NA Intergenic Intergenic 220620 NM_182560 283598 Hs.448754 NM_182560 HPRD:08075 C14orf177 - chromosome 14 open reading frame 177 protein-coding 0.013889 0.448276 -154(AGAGGCCT,-,0.00) -121(GGCGGGGG,+,0.00) -125(GCGGGGCGGGGG,+,0.00) 561_WT_peak_3883 chr19 52552467 52552728 + 26 NA promoter-TSS (NM_014650) promoter-TSS (NM_014650) -524 NM_014650 9668 Hs.655934 NM_014650 HPRD:11716 ZNF432 - zinc finger protein 432 protein-coding 0.049808 0.492366 -108(AAGCGTTT,+,0.00) 561_WT_peak_792 chr1 231748613 231748745 + 26 NA promoter-TSS (NR_034037) promoter-TSS (NR_034037) -843 NR_034037 100287814 Hs.25555 NR_034037 ENSG00000229228 LINC00582 - long intergenic non-protein coding RNA 582 ncRNA 0.000000 0.375940 -94(TCCCTCCCCT,+,0.00) 561_WT_peak_5453 chr4 40057505 40057708 + 26 NA promoter-TSS (NM_018177) promoter-TSS (NM_018177) -918 NM_018177 55728 Hs.391463 NM_018177 HPRD:11382 N4BP2 B3BP NEDD4 binding protein 2 protein-coding 0.073892 0.647059 21(CCTTTGTCTCCC,-,0.00) 561_WT_peak_5053 chr3 33034234 33034471 + 25 NA Intergenic Intergenic 41286 NM_005508 1233 Hs.184926 NM_005508 CCR4 CC-CKR-4|CD194|CKR4|CMKBR4|ChemR13|HGCN:14099|K5-5 chemokine (C-C motif) receptor 4 protein-coding 0.012658 0.550420 34(CAAAACCC,+,0.00) 561_WT_peak_5255 chr3 130569059 130569320 + 25 NA promoter-TSS (NM_001199180) promoter-TSS (NM_001199180) -180 NM_001199182 27032 Hs.584884 NM_014382 HPRD:05089 ATP2C1 ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1 ATPase, Ca++ transporting, type 2C, member 1 protein-coding 0.011494 0.400763 561_WT_peak_1276 chr11 47600313 47600549 + 25 NA promoter-TSS (NM_004551) promoter-TSS (NM_004551) 90 NM_016506 55709 Hs.718483 NM_016506 HPRD:13757 KBTBD4 BKLHD4|HSPC252 kelch repeat and BTB (POZ) domain containing 4 protein-coding 0.076271 0.641350 46(GCTTCCGGCTCC,-,0.00) 561_WT_peak_2790 chr16 30886711 30886881 + 25 NA promoter-TSS (NR_039744) promoter-TSS (NR_039744) 15 NR_110941 101928736 Hs.303197 NR_110940 LOC101928736 - uncharacterized LOC101928736 ncRNA 0.088235 0.684211 -107(GCTGCGCCGC,+,0.00),-107(GCTGCGCCGC,-,0.00) 561_WT_peak_5635 chr4 166248408 166248653 + 25 NA promoter-TSS (NM_006745) promoter-TSS (NM_006745) -288 NM_001017369 6307 Hs.105269 NM_006745 HPRD:07396 MSMO1 DESP4|ERG25|SC4MOL methylsterol monooxygenase 1 protein-coding 0.114286 0.691057 -110(CGGCGCGA,-,0.00) -43(GGCGACTCCGCG,-,0.00) -23(CGAGGCGG,+,0.00) 10(CGCCGTGGCGCG,-,0.00) 29(GCTTCCCCGC,-,0.00) 561_WT_peak_401 chr1 116920624 116920828 + 25 NA intron (NM_001160233, intron 1 of 22) intron (NM_001160233, intron 1 of 22) 4237 NM_001160233 476 Hs.371889 NM_000701 HPRD:01662 ATP1A1 - ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding 0.009804 0.385366 561_WT_peak_3774 chr19 41859966 41860181 + 25 NA promoter-TSS (NM_000660) promoter-TSS (NM_000660) -235 NM_000660 7040 Hs.645227 NM_000660 TGFB1 CED|DPD1|LAP|TGFB|TGFbeta transforming growth factor, beta 1 protein-coding 0.065116 0.685185 -84(GGCGGCCAAG,+,0.00) -120(CCCCGGCTCCGC,-,0.00) -119(CCCGGCTCCGCC,-,0.00) -116(GGCTCCGCCC,-,0.00) -83(GCGGCCAAGC,+,0.00) 561_WT_peak_1133 chr10 104159296 104159475 + 25 NA exon (NM_001261403, exon 13 of 22) exon (NM_001261403, exon 13 of 22) 4032 NM_001261403 4791 Hs.73090 NM_002502 HPRD:01239 NFKB2 CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p105|p52 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) protein-coding 0.150838 0.716667 -53(CGCGGACG,+,0.00),-51(CGGACGCG,-,0.00) -53(CGCGGACGCGCG,+,0.00) 561_WT_peak_2793 chr16 31085617 31085873 + 24 NA promoter-TSS (NM_001172668) promoter-TSS (NM_001172668) 2 NM_014699 9726 Hs.119273 NM_014699 HPRD:15886 ZNF646 - zinc finger protein 646 protein-coding 0.050781 0.571984 48(CCCCCCTTCTCC,+,0.00) -122(CGGCTCGGAGGC,+,0.00) 80(CCCACCTCCCGG,+,0.00) -152(TAGCGCCG,-,0.00) -52(ACTTCCTGTTTC,-,0.00) -78(GCGGGGAAGC,+,0.00) 561_WT_peak_4809 chr21 43826579 43826757 + 24 NA intron (NM_001001895, intron 2 of 13) intron (NM_001001895, intron 2 of 13) 2697 NM_001001895 53347 Hs.473912 NM_018961 HPRD:06904 UBASH3A CLIP4|STS-2|TULA|TULA-1 ubiquitin associated and SH3 domain containing A protein-coding 0.005618 0.474860 561_WT_peak_230 chr1 51425747 51425999 + 24 NA promoter-TSS (NM_007051) promoter-TSS (NM_007051) 63 NM_007051 11124 Hs.530402 NM_007051 HPRD:05124 FAF1 HFAF1s|UBXD12|UBXN3A|hFAF1 Fas (TNFRSF6) associated factor 1 protein-coding 0.134921 0.711462 -17(TCCGCCTCCTCC,+,0.00) -27(CGCGGCCGCC,-,0.00) -55(CCGAGCGA,+,0.00) -71(GGCGGGGG,+,0.00) -16(CCGCCTCCTCCG,-,0.00),-7(CCGCTTCCTCCC,-,0.00) -63(CGGGGAAA,+,0.00) -107(AGCGCGCA,+,0.00) -70(GCGGGGGCGGGG,+,0.00) 78(GCGCCGCTTT,+,0.00) 561_WT_peak_1695 chr12 51158284 51158526 + 24 NA intron (NM_005171, intron 1 of 6) CpG 616 NM_005171 466 Hs.648565 NM_005171 HPRD:00440 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding 0.128099 0.699588 -1(GGCGGAGGGCGG,-,0.00) -14(GGGCCCGGAGCC,+,0.00) -91(GCCGCGGG,+,0.00),-5(GCCGGGCG,+,0.00) 34(GTCCGCCG,-,0.00) -102(CGAAACCG,+,0.00) 26(GGCGCGGT,-,0.00) 43(GCGGAGCCCGGG,+,0.00) -11(CCCGGAGCCGGG,+,0.00) -68(GAAGCCGCCC,-,0.00) 561_WT_peak_3449 chr18 18690944 18691148 + 24 NA 5' UTR (NM_005406, exon 1 of 33) 5' UTR (NM_005406, exon 1 of 33) 766 NM_005406 6093 Hs.306307 NM_005406 ROCK1 P160ROCK|ROCK-I Rho-associated, coiled-coil containing protein kinase 1 protein-coding 0.107843 0.736585 -139(GGAGCCGGAACC,+,0.00),-63(GACCCCGGGCCG,-,0.00) -28(CTCGGACGCC,-,0.00) -152(GCCGCGGG,+,0.00),-55(GCCGGGGG,+,0.00) -101(CCCCGTCTTCCC,-,0.00) 28(CGTCGCCA,+,0.00) -160(GGTTCGCAGC,-,0.00),-152(GCCGCGGGGC,+,0.00) 561_WT_peak_204 chr1 43147645 43147820 + 24 NA promoter-TSS (NM_004559) promoter-TSS (NM_004559) -334 NM_004559 4904 Hs.473583 NM_004559 HPRD:01095 YBX1 BP-8|CSDA2|CSDB|DBPB|MDR-NF1|NSEP-1|NSEP1|YB-1|YB1 Y box binding protein 1 protein-coding 0.091429 0.659091 -128(AGGCGTCT,+,0.00) -23(CCGCCAGCCCGG,+,0.00) -25(GCCCGCCAGCCC,+,0.00) -91(CGGGTAAT,+,0.00) -23(CCGCCAGCCCGG,-,0.00),-19(CAGCCCGGCGGC,-,0.00) 561_WT_peak_4398 chr2 191746457 191746834 + 24 NA intron (NM_001256310, intron 1 of 14) intron (NM_001256310, intron 1 of 14) 1098 NM_014905 2744 Hs.116448 NM_014905 HPRD:00700 GLS AAD20|GAC|GAM|GLS1|KGA glutaminase protein-coding 0.063660 0.603175 164(GGCACCGGAAAC,+,0.00),201(GAATCCGGTCAT,-,0.00) -130(AGGCCGCT,+,0.00) -41(CTGCACGA,-,0.00) -135(CAGAGAGGCCGC,-,0.00) 561_WT_peak_7472 chr9 136009408 136009591 + 24 NA intron (NM_001042368, intron 1 of 17) intron (NM_001042368, intron 1 of 17) -2955 NM_001271774 5900 Hs.106185 NM_006266 HPRD:03371 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding 0.027322 0.630435 -66(AAGTCGCT,+,0.00) -10(TCGTGCAG,+,0.00) 561_WT_peak_4785 chr21 36260515 36260685 + 24 NA 5' UTR (NM_001001890, exon 1 of 6) 5' UTR (NM_001001890, exon 1 of 6) 387 NM_001122607 861 Hs.149261 NM_001754 HPRD:01043 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBFA2|EVI-1|PEBP2aB runt-related transcription factor 1 protein-coding 0.129412 0.672515 -82(TCGGGCGG,-,0.00) -8(CCTCGGAC,+,0.00) -107(GCTCCGCGGC,-,0.00) 561_WT_peak_876 chr10 8179484 8179812 + 24 NA Intergenic Intergenic 82981 NM_001002295 2625 Hs.524134 NM_002051 HPRD:00572 GATA3 HDR|HDRS GATA binding protein 3 protein-coding 0.027439 0.489362 131(AGGCTGAGAGAG,-,0.00) 67(GAAGCAGGAACC,+,0.00) 144(GACGGAGCCGCG,+,0.00) 561_WT_peak_979 chr10 43915730 43915947 + 24 NA Intergenic Intergenic -11142 NM_001098204 3185 Hs.808 NM_004966 HPRD:03023 HNRNPF HNRPF|OK/SW-cl.23|mcs94-1 heterogeneous nuclear ribonucleoprotein F protein-coding 0.041475 0.513761 -7(AGCCGCCT,-,0.00) -159(CAGCTCCTTCCC,-,0.00) 561_WT_peak_4753 chr21 26934510 26934839 + 24 NA intron (NR_001458, intron 1 of 2) CpG 217 NR_001458 114614 Hs.697120 NR_001458 ENSG00000234883 MIR155HG BIC|MIRHG2|NCRNA00172 MIR155 host gene (non-protein coding) ncRNA 0.115502 0.715152 -37(GACTTCGGTGCG,-,0.00) 142(GGGGGAAGGAGG,-,0.00) 17(CGCGCACG,+,0.00) -44(GCCGGGGG,+,0.00),6(GGCGGGGG,+,0.00) 144(GGGAAGGAGGGG,+,0.00) -14(CGGGTTAA,+,0.00) 15(AGCGCGCA,+,0.00) 7(GCGGGGGCAGCG,+,0.00) 561_WT_peak_5622 chr4 153457092 153457504 + 24 NA promoter-TSS (NR_033797) promoter-TSS (NR_033797) -118 NR_033797 54553 Hs.142307 NR_033797 ENSG00000268471 DKFZP434I0714 - uncharacterized protein DKFZP434I0714 ncRNA 0.111650 0.711864 -4(GGAGGAGAGCGG,-,0.00) 210(AGCCGCCA,-,0.00) -11(AGGGGCGGGA,-,0.00) 196(GCCGCGGG,+,0.00) 192(TCGGGCCG,+,0.00) -105(GCGGCGGCGGCG,+,0.00),-102(GCGGCGGCGGCG,+,0.00),-96(GCGGCGGCAGCG,+,0.00),4(GCGGCGCCTGCC,+,0.00) 111(CCCGCCCTGGGC,+,0.00) 104(CAGCCACCCCGC,-,0.00) 561_WT_peak_4262 chr2 113012087 113012550 + 24 NA intron (NM_032494, intron 1 of 8) CpG 346 NM_032494 84524 Hs.418416 NM_032494 HPRD:11695 ZC3H8 Fliz1|ZC3HDC8 zinc finger CCCH-type containing 8 protein-coding 0.086393 0.642241 -108(AGACGCTA,-,0.00) 1(CAGCCCCGGCCC,+,0.00) 4(CCCCGGCCCT,+,0.00) -18(CCCCCGCC,-,0.00),92(CGCCCGGC,-,0.00) 63(CCGCACGA,-,0.00) 125(TCGCGACG,-,0.00) 189(CCCGCTGAGCCC,+,0.00) 80(GTCAGACG,-,0.00) 253(CCGTTTTG,-,0.00),278(GGGTTTTG,-,0.00) 42(GCTTCTGCTCCC,-,0.00) -132(GAAACAGGCAAC,+,0.00) 55(CCCGGACCCCGC,-,0.00) 129(GACGCGGCCC,-,0.00),265(GGGCCGGGTT,+,0.00) 128(CGACGCGG,+,0.00) -21(GCTCCCCCGC,-,0.00) 561_WT_peak_555 chr1 156024349 156024566 + 23 NA promoter-TSS (NM_020131) promoter-TSS (NM_020131) -60 NM_001145264 28956 Hs.632483 NM_014017 HPRD:17463 LAMTOR2 ENDAP|HSPC003|MAPBPIP|MAPKSP1AP|ROBLD3|Ragulator2|p14 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 protein-coding 0.073733 0.582569 8(GGGCGGGGTT,+,0.00) 561_WT_peak_1306 chr11 60828720 60828951 + 23 NA Intergenic Intergenic -41095 NM_014207 921 Hs.58685 NM_014207 HPRD:01078 CD5 LEU1|T1 CD5 molecule protein-coding 0.017316 0.474138 19(TTTACCAG,-,0.00) 561_WT_peak_1858 chr12 111180873 111181062 + 23 NA promoter-TSS (NM_002710) promoter-TSS (NM_002710) -184 NM_002710 5501 Hs.79081 NM_002710 HPRD:08911 PPP1CC PP-1G|PP1C|PPP1G protein phosphatase 1, catalytic subunit, gamma isozyme protein-coding 0.089947 0.631579 -162(CCGCGTCCCCGC,+,0.00) -95(CCGAGCGA,+,0.00) -126(CGAGTAAA,+,0.00) -130(GGGCCGAGTA,+,0.00),-121(AAATAGGCCC,-,0.00) -21(GCGGCCATCGCC,+,0.00) 561_WT_peak_7372 chr9 101855470 101855657 + 23 NA Intergenic Intergenic -11849 NM_001130916 7046 Hs.494622 NM_004612 HPRD:01822 TGFBR1 AAT5|ACVRLK4|ALK-5|ALK5|ESS1|LDS1|LDS1A|LDS2A|MSSE|SKR4|TGFR-1 transforming growth factor, beta receptor 1 protein-coding 0.010695 0.521277 -31(CAAAAGCG,+,0.00),12(TGGTTTTG,-,0.00) 561_WT_peak_6549 chr6 160941492 160941793 + 23 NA Intergenic LTR12E|LTR|ERV1 -9486 NR_028093 80350 Hs.654503 NM_024492 HPRD:17441 LPAL2 APOA2|APOAL|APOARGC lipoprotein, Lp(a)-like 2, pseudogene pseudo 0.096346 0.741722 -47(TCCGCGCA,+,0.00) -87(GCGGCGCCTGCT,+,0.00),-62(GCGGGGCCCGCT,+,0.00) 60(CCGCCTCG,-,0.00) 561_WT_peak_3394 chr17 80186256 80186443 + 23 NA promoter-TSS (NM_001042422) promoter-TSS (NM_001042422) 67 NM_001206950 9123 Hs.500761 NM_004207 HPRD:04854 SLC16A3 MCT 3|MCT 4|MCT-3|MCT-4|MCT3|MCT4 solute carrier family 16 (monocarboxylate transporter), member 3 protein-coding 0.096257 0.723404 -142(AGCCACCT,-,0.00) -79(GCCGCGGG,+,0.00) 1(GGTCGGAC,+,0.00),2(GTCGGACG,-,0.00) -84(CGCAGGCCGCGG,-,0.00) -147(CGCGGAGCCACC,+,0.00) -74(GGGCCGCTCC,+,0.00) -95(CATCCAGGCAGC,-,0.00) 561_WT_peak_574 chr1 160231533 160231863 + 23 NA intron (NM_015726, intron 1 of 13) intron (NM_015726, intron 1 of 13) 579 NR_028106 50717 Hs.632447 NM_015726 HPRD:18300 DCAF8 GAN2|H326|WDR42A DDB1 and CUL4 associated factor 8 protein-coding 0.042424 0.525680 40(GGGGGAGGGGGA,-,0.00) 80(GGGAGACGCAGG,+,0.00) 57(TGCGCGGT,-,0.00) 18(GCTGGGCCTGGG,+,0.00) 561_WT_peak_2566 chr15 78729965 78730111 + 23 NA promoter-TSS (NM_004136) promoter-TSS (NM_004136) -480 NM_004136 3658 Hs.436031 NM_004136 HPRD:08858 IREB2 ACO3|IRP2|IRP2AD iron-responsive element binding protein 2 protein-coding 0.054795 0.544218 -129(AGAGGCTT,-,0.00) 561_WT_peak_164 chr1 33592745 33592760 + 22 NA Intergenic Intergenic 46038 NM_001293562 113451 Hs.101807 NM_052998 HPRD:17657 AZIN2 ADC|AZI2|ODC-p|ODC1L|ODCp antizyme inhibitor 2 protein-coding 0.000000 0.500000 561_WT_peak_226 chr1 46216627 46216766 + 22 NA promoter-TSS (NM_005897) promoter-TSS (NM_005897) -211 NM_005897 3652 Hs.744252 NM_005897 HPRD:00940 IPP KLHL27 intracisternal A particle-promoted polypeptide protein-coding 0.057554 0.535714 561_WT_peak_1129 chr10 103912296 103912532 + 21 NA intron (NM_004741, intron 1 of 12) CpG 481 NM_001284389 9221 Hs.523238 NM_004741 ENSG00000166197 NOLC1 NOPP130|NOPP140|NS5ATP13|P130 nucleolar and coiled-body phosphoprotein 1 protein-coding 0.059322 0.607595 -9(TCGGTCGC,-,0.00) -145(GGGCTGAGATGA,-,0.00) -154(GCGGGGACCGGG,+,0.00) 561_WT_peak_5662 chr5 392675 393025 + 21 NA intron (NM_020731, intron 4 of 11) intron (NM_020731, intron 4 of 11) 50408 NM_138464 116349 Hs.446702 NM_138464 ENSG00000221990 C5orf55 - chromosome 5 open reading frame 55 protein-coding 0.048571 0.538462 -48(GCGGGAAGGCTG,-,0.00) -106(CCAAACCG,+,0.00) 174(CTTCTCGG,+,0.00) 561_WT_peak_246 chr1 53791737 53792057 + 21 NA intron (NM_001018054, intron 2 of 17) CpG 1924 NM_004631 7804 Hs.280387 NM_004631 LRP8 APOER2|HSZ75190|LRP-8|MCI1 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor protein-coding 0.075000 0.672897 -8(GGCGCCCGAG,+,0.00) 64(AGGGCAGGGC,-,0.00) 31(TGCGCGGG,-,0.00) -10(GCGGCGCCCGAG,+,0.00),51(GCGGGGCCGGGG,+,0.00),73(CGGTGCCCCCGC,-,0.00) -13(AAAGCGGCGC,-,0.00) -162(CTTCTCGG,+,0.00) 137(GGCCACGGGGGC,-,0.00) 561_WT_peak_6905 chr7 151329739 151329828 + 21 NA promoter-TSS (NM_024429) promoter-TSS (NM_024429) -439 NM_024429 51422 Hs.647072 NM_016203 HPRD:04119 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase, AMP-activated, gamma 2 non-catalytic subunit protein-coding 0.044944 0.566667 561_WT_peak_1345 chr11 65149622 65149871 + 21 NA 5' UTR (NM_001278250, exon 1 of 5) 5' UTR (NM_001278250, exon 1 of 5) 111 NM_001300820 283130 Hs.661604 NM_182556 HPRD:14142 SLC25A45 - solute carrier family 25, member 45 protein-coding 0.044177 0.676000 -163(TCGTGCAG,+,0.00),-135(GCGTGCCG,+,0.00) 41(GGGCATGGCCGC,-,0.00) 561_WT_peak_1367 chr11 65624643 65624939 + 20 NA intron (NM_005507, intron 1 of 3) CpG 1013 NM_005507 1072 Hs.170622 NM_005507 HPRD:03261 CFL1 CFL|HEL-S-15 cofilin 1 (non-muscle) protein-coding 0.101351 0.680135 26(GGCGGCCGGG,+,0.00) 42(CGTGCGCG,-,0.00),46(CGCGCACG,+,0.00),48(CGCACGCG,-,0.00) 56(CCGACAGA,+,0.00) -99(TCGGGCCG,+,0.00) -114(CGGTTTTC,-,0.00) 3(CGCTGGCCCAGG,-,0.00) -38(AACTCGGCTC,-,0.00) 561_WT_peak_5627 chr4 156874810 156875040 + 20 NA exon (NM_001334, exon 1 of 8) exon (NM_001334, exon 1 of 8) 123 NM_001334 1519 Hs.75262 NM_001334 HPRD:02772 CTSO CTSO1 cathepsin O protein-coding 0.147826 0.761905 41(CTCTGCCGCC,-,0.00) -132(CCGGGGAGGCGC,-,0.00),-110(CCCGGAAGGCGG,-,0.00),-36(CCGCCGCCCCGG,+,0.00) -39(TCGCCGCC,+,0.00) 31(CGCCCGGC,-,0.00) -131(CGGGGAGGCGCG,+,0.00),-86(CGCGGCTCCGCG,+,0.00),-86(CGCGGCTCCGCG,-,0.00) 20(GTCCATTGCGGC,-,0.00) -82(GCTCCGCGGC,-,0.00),-42(GCATCGCCGC,-,0.00)