PeakID (cmd=annotatePeaks.pl /home/sierramc/tox2/ChIPseq/motif_analysis/wt_act.bed hg19 -m motif10.motif motif11.motif motif12.motif motif13.motif motif14.motif motif15.motif motif16.motif motif17.motif motif18.motif motif19.motif motif1.motif motif20.motif motif21.motif motif22.motif motif23.motif motif24.motif motif25.motif motif26.motif motif27.motif motif28.motif motif2.motif motif3.motif motif4.motif motif5.motif motif6.motif motif7.motif motif8.motif motif9.motif) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type CpG% GC% 12-TCGCCCTCCTCC,BestGuess:MA0528.1_ZNF263/Jaspar(0.702) Distance From Peak(sequence,strand,conservation) 14-NDVNYCGDNNNN,BestGuess:Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer(0.717) Distance From Peak(sequence,strand,conservation) 13-GGCGGCCGAG,BestGuess:ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer(0.618) Distance From Peak(sequence,strand,conservation) 10-AAGCGGCT,BestGuess:PH0115.1_Nkx2-6/Jaspar(0.701) Distance From Peak(sequence,strand,conservation) 16-CCGCCTTCCCGG,BestGuess:Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer(0.625) Distance From Peak(sequence,strand,conservation) 11-TCGACGCC,BestGuess:PB0113.1_E2F3_2/Jaspar(0.681) Distance From Peak(sequence,strand,conservation) 19-GAGCGCCAGCCC,BestGuess:MA0506.1_NRF1/Jaspar(0.649) Distance From Peak(sequence,strand,conservation) 14-CGCGTACG,BestGuess:PB0094.1_Zfp128_1/Jaspar(0.695) Distance From Peak(sequence,strand,conservation) 15-CCGACCGA,BestGuess:PB0179.1_Sp100_2/Jaspar(0.573) Distance From Peak(sequence,strand,conservation) 20-TCCCGGCCCT,BestGuess:Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer(0.761) Distance From Peak(sequence,strand,conservation) 1-GCCGGGGG,BestGuess:PB0164.1_Smad3_2/Jaspar(0.686) Distance From Peak(sequence,strand,conservation) 17-TCGTGCCG,BestGuess:HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer(0.647) Distance From Peak(sequence,strand,conservation) 20-CGGAAGAAGCGG,BestGuess:MA0062.2_GABPA/Jaspar(0.663) Distance From Peak(sequence,strand,conservation) 19-CGTCGCTA,BestGuess:PB0056.1_Rfxdc2_1/Jaspar(0.743) Distance From Peak(sequence,strand,conservation) 21-CCCTCTCAGCCC,BestGuess:Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer(0.629) Distance From Peak(sequence,strand,conservation) 20-CGTCGGAC,BestGuess:PB0179.1_Sp100_2/Jaspar(0.614) Distance From Peak(sequence,strand,conservation) 21-CAAAACCG,BestGuess:MF0009.1_TRP(MYB)_class/Jaspar(0.681) Distance From Peak(sequence,strand,conservation) 22-CGGGTAAA,BestGuess:PB0153.1_Nr2f2_2/Jaspar(0.680) Distance From Peak(sequence,strand,conservation) 24-GGGAGCCGAAGG,BestGuess:POL013.1_MED-1/Jaspar(0.640) Distance From Peak(sequence,strand,conservation) 25-GAAACAGGAAGC,BestGuess:Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer(0.798) Distance From Peak(sequence,strand,conservation) 2-RCCGCGCA,BestGuess:PB0199.1_Zfp161_2/Jaspar(0.810) Distance From Peak(sequence,strand,conservation) 3-GCGGGGCCAGCG,BestGuess:Sp1(Zf)/Promoter/Homer(0.696) Distance From Peak(sequence,strand,conservation) 4-CGCGGAGCCGCG,BestGuess:POL013.1_MED-1/Jaspar(0.687) Distance From Peak(sequence,strand,conservation) 4-GGGCCGAKTT,BestGuess:POL003.1_GC-box/Jaspar(0.654) Distance From Peak(sequence,strand,conservation) 6-CKACTCGG,BestGuess:PB0199.1_Zfp161_2/Jaspar(0.534) Distance From Peak(sequence,strand,conservation) 7-GCCGCCATGGCS,BestGuess:Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.695) Distance From Peak(sequence,strand,conservation) 7-GCTGCGAAGC,BestGuess:POL013.1_MED-1/Jaspar(0.627) Distance From Peak(sequence,strand,conservation) 11-GCGGCCTGGCTG,BestGuess:ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer(0.681) Distance From Peak(sequence,strand,conservation) 127 chr9 74383237 74383672 + 0 NA 5' UTR (NM_001135820, exon 1 of 23) 5' UTR (NM_001135820, exon 1 of 23) 346 NM_013390 23670 Hs.494146 NM_013390 HPRD:09317 TMEM2 - transmembrane protein 2 protein-coding 0.094253 0.688073 153(TCCGCCTCCGCC,+,0.00),159(TCCGCCTCCTCC,+,0.00),165(TCCTCCTCCTCC,+,0.00),168(TCCTCCTCCTCC,+,0.00),171(TCCTCCTCCTCC,+,0.00),174(TCCTCCTCCTCC,+,0.00) -79(AGTCGCTT,-,0.00) 181(CCTCCTGCCCCG,+,0.00) 226(CCCGGAGCCGCC,+,0.00) -82(CCGAGTCG,-,0.00) 289(GGCCCGGGCGGC,-,0.00) 32 chr6 130536668 130536902 + 0 NA intron (NM_001017373, intron 2 of 11) intron (NM_001017373, intron 2 of 11) 245 NM_001277185 154075 Hs.440508 NM_152552 HPRD:11530 SAMD3 - sterile alpha motif domain containing 3 protein-coding 0.000000 0.446809 59(AAGTGGTT,+,0.00) 90 chr6 33043324 33043514 + 0 NA promoter-TSS (NM_002121) promoter-TSS (NM_002121) -284 NM_002121 3115 Hs.485130 NM_002121 HLA-DPB1 DPB1|HLA-DP|HLA-DP1B|HLA-DPB major histocompatibility complex, class II, DP beta 1 protein-coding 0.005263 0.439791 206 chr13 39612168 39612412 + 0 NA promoter-TSS (NM_025138) promoter-TSS (NM_025138) -77 NM_025138 80209 Hs.318526 NM_025138 HPRD:12616 PROSER1 C13orf23 proline and serine rich 1 protein-coding 0.036885 0.506122 118 chr4 6692121 6692369 + 0 NA Intergenic Intergenic -3321 NM_005980 6286 Hs.2962 NM_005980 S100P MIG9 S100 calcium binding protein P protein-coding 0.020161 0.606426 114(TGGCCTTCCCGG,+,0.00) 38(CCGACTGA,+,0.00) 86(GCGGCCTTGCCG,+,0.00) 71 chr15 70391610 70391900 + 0 NA Intergenic CpG-8039 -1499 NM_001105192 7090 Hs.287362 NM_005078 HPRD:02558 TLE3 ESG|ESG3|GRG3|HsT18976 transducin-like enhancer of split 3 protein-coding 0.100000 0.594502 19(GGCCGCCAGCCC,+,0.00) 123(CGGCTCGA,-,0.00) -92(CGCTTTTG,-,0.00) 102 chr7 32529730 32530155 + 0 NA promoter-TSS (NM_012322) promoter-TSS (NM_012322) 81 NM_012322 23658 Hs.424908 NM_012322 HPRD:06285 LSM5 YER146W LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) protein-coding 0.075294 0.586854 -87(GGAGGAGCCCGA,-,0.00) 40(CTCGGCCCCC,-,0.00) 137(AGCCGCCA,-,0.00) 205(CCGCTTTTTCCG,-,0.00) 293(TTTCCCCG,-,0.00) 38(CCCTCGGCCCCC,-,0.00) 64(GCTCCCTGTTCC,-,0.00) 273(GGGTCGCGTT,+,0.00) 138(GCCGCCATGGCT,+,0.00),140(CGCCATGGCTAC,-,0.00) 112(GCTGCGACGG,+,0.00) 200 chr12 47609411 47609676 + 0 NA intron (NR_026544, intron 2 of 2) intron (NR_026544, intron 2 of 2) 683 NR_026544 100233209 Hs.657722 NR_026544 ENSG00000247774 PCED1B-AS1 - PCED1B antisense RNA 1 ncRNA 0.015094 0.511278 32(AAGCGGTT,+,0.00) -60(AGGCTGGGGCTC,-,0.00) 83(GGGAGGCCAAGG,+,0.00) 47(TGCCATGGTGGC,-,0.00),87(GGCCAAGGCGGG,-,0.00) 18 chr19 16435586 16436110 + 0 NA intron (NM_016270, intron 1 of 2) CpG 197 NM_016270 10365 Hs.744182 NM_016270 HPRD:03602 KLF2 LKLF Kruppel-like factor 2 protein-coding 0.135496 0.748571 144(GGCGGCCGGG,+,0.00) -39(CCGCCCGCCCGC,+,0.00),100(CCGCGAGCGCGG,-,0.00),132(CGGGGACGGCGG,-,0.00),251(CGGGGATCGCGG,-,0.00) 16(CGTCCGCG,-,0.00) 66(TCCTGCCG,+,0.00),95(CCGTGCCG,+,0.00) 362(GTCCGGCG,-,0.00) -90(GCCGCGCC,+,0.00),158(TGGGCGGC,-,0.00) -97(CGCGCGCGCCGC,-,0.00),-70(GCGGGCCCGGCC,+,0.00),-47(AGCCGTCCCCGC,-,0.00),131(GCGGGGACGGCG,+,0.00),339(CGCTGGCCGCGC,-,0.00) 41(CCGGCCATGGCG,+,0.00),43(GGCCATGGCGCT,-,0.00) 298(GCCCCGCCGC,-,0.00) -19(CAGCCCGGCCTC,-,0.00) 125 chr10 30984726 30985038 + 0 NA non-coding (NR_036438, exon 2 of 10) non-coding (NR_036438, exon 2 of 10) 3679 NR_036438 645954 Hs.408581 NR_036438 ENSG00000234814 SVILP1 - supervillin pseudogene 1 pseudo 0.032051 0.472843 96(CCTGCGGAGC,+,0.00) 16 chr5 35854079 35854352 + 0 NA Intergenic Intergenic -2762 NM_002185 3575 Hs.591742 NM_002185 HPRD:00893 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding 0.007326 0.445255 44 chr20 42578870 42579067 + 0 NA intron (NM_001098798, intron 1 of 7) intron (NM_001098798, intron 1 of 7) 4432 NM_001098798 84969 Hs.26608 NM_032883 HPRD:12734 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding 0.040609 0.616162 -57(AAGCGGAT,+,0.00) -75(AGGAAGAAGCCG,+,0.00) 70(GCTTCCTCTTTC,-,0.00) 20(CGCTGGCTCCCC,-,0.00) -5(GCTCTGCAGC,-,0.00) 55 chr1 182360475 182360905 + 0 NA promoter-TSS (NM_001033056) promoter-TSS (NM_001033056) -151 NM_001033056 2752 Hs.518525 NM_002065 HPRD:00701 GLUL GLNS|GS|PIG43|PIG59 glutamate-ammonia ligase protein-coding 0.106977 0.709977 -89(GGCGCAGGCCGG,-,0.00) 212(GACACCGGGCCG,-,0.00) 244(CCGAGCAGGCGG,-,0.00) 25(CAGCGCCAGCCC,+,0.00) 123(AGGGCTGGGA,-,0.00) 82(TCATGCCG,+,0.00) 257(CGGGTAAA,+,0.00) 163(TGGGCGGC,-,0.00) -62(GGGCGGCGCT,+,0.00) 263(AAGCTAGGCCGC,-,0.00) 84 chr16 10970474 10971515 + 0 NA promoter-TSS (NM_000246) promoter-TSS (NM_000246) -61 NM_000246 4261 Hs.701991 NM_000246 HPRD:02475 CIITA C2TA|CIITAIV|MHC2TA|NLRA class II, major histocompatibility complex, transactivator protein-coding 0.015370 0.510557 131(GGCGGAGGGCTA,-,0.00) 863(AGGTGTCT,+,0.00) 626(TCCACGCC,+,0.00) 553(GGGCACGA,-,0.00) 225(CGTCAGAC,+,0.00) 523(GGCATCCGAAGG,+,0.00) 368(GAAACAGAAATC,+,0.00) 454(CTTGGCGG,+,0.00) 587(GCTGCCTGGCTG,+,0.00) 27 chr6 99872826 99873295 + 0 NA intron (NM_032870, intron 1 of 11) CpG 147 NM_015491 25957 Hs.520287 NM_015491 HPRD:10787 PNISR C6orf111|HSPC306|SFRS18|SRrp130|bA98I9.2 PNN-interacting serine/arginine-rich protein protein-coding 0.066098 0.495745 188(TCGCCGCC,+,0.00) 60(AGCGTACG,+,0.00),62(CGTACGCA,-,0.00) 233 chr10 51623098 51623308 + 0 NA non-coding (NR_073029, exon 1 of 8) non-coding (NR_073029, exon 1 of 8) 183 NR_073030 100287932 Hs.524308 NM_006327 ENSG00000138297 TIMM23 TIM23 translocase of inner mitochondrial membrane 23 homolog (yeast) protein-coding 0.100000 0.635071 -3(TCCCCCGCCTCC,+,0.00) -96(CTTACGCG,-,0.00),-72(CGCGTGCG,+,0.00) -2(CCCCCGCC,-,0.00) -8(CCGCTTCCCCCG,-,0.00) -78(CAAATCCG,+,0.00),-19(TGGTTTTG,-,0.00) 94(CGGGTAAC,+,0.00) -7(CGCTTCCCCCGC,-,0.00) 190 chr22 37881023 37881423 + 0 NA intron (NM_002405, intron 1 of 7) (CA)n|Simple_repeat|Simple_repeat 1202 NM_001166343 4242 Hs.517603 NM_002405 HPRD:03988 MFNG - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding 0.050000 0.615960 165(CTCAGCCGCC,-,0.00) 168(AGCCGCCA,-,0.00) -1(GGGCTGGAAGGG,-,0.00) 242(AGACATGGCGGC,-,0.00) 130(CAGGCAGGCCTC,-,0.00) 161 chr20 17551948 17552118 + 0 NA intron (NM_006870, intron 1 of 3) intron (NM_006870, intron 1 of 3) 1434 NM_001011546 11034 Hs.304192 NM_006870 HPRD:16446 DSTN ACTDP|ADF|HEL32|bA462D18.2 destrin (actin depolymerizing factor) protein-coding 0.017647 0.380117 -61(CAGTTTTG,-,0.00) 194 chr2 70141528 70141808 + 0 NA promoter-TSS (NM_001202514) promoter-TSS (NM_001202514) -505 NM_001202514 4084 Hs.468908 NM_002357 HPRD:02487 MXD1 BHLHC58|MAD|MAD1 MAX dimerization protein 1 protein-coding 0.082143 0.704626 168(AGCCACTT,-,0.00) -10(TGGACGCC,+,0.00) -86(CAGACCGA,+,0.00) -38(CGACACGA,-,0.00) 116(CCCTCCCAGCCA,+,0.00) 44(GTCCGAGG,-,0.00),105(CGCCGGAC,+,0.00) 16(TTTCCCCG,-,0.00) 96(GCCGCCCA,+,0.00) 93(AGCGCCGCCC,-,0.00) 71(GCTCCGCAGC,-,0.00) 147(GCAGCCAGGCTG,+,0.00),148(CAGCCAGGCTGC,-,0.00) 95 chr7 155088770 155089163 + 0 NA promoter-TSS (NM_198337) promoter-TSS (NM_198337) -520 NM_198337 3638 Hs.520819 NM_005542 HPRD:03633 INSIG1 CL-6|CL6 insulin induced gene 1 protein-coding 0.089059 0.670051 262(CCGCCTCCCGGC,+,0.00) -76(CTCCCTCAGCCC,+,0.00) -46(CAAAGCCG,+,0.00) -10(CGACTCGG,+,0.00) 183(CCCGCCATTGCG,+,0.00) 57 chr9 95056242 95056644 + 0 NA promoter-TSS (NM_013417) promoter-TSS (NM_013417) -405 NM_013417 3376 Hs.445403 NM_002161 HPRD:02832 IARS IARS1|ILERS|ILRS|IRS|PRO0785 isoleucyl-tRNA synthetase protein-coding 0.047264 0.456576 51(AGGTGGCT,+,0.00),98(AAGCCGCT,+,0.00),99(AGCCGCTT,-,0.00) -57(GGCGCCGA,-,0.00) 96(CAAAGCCG,+,0.00) 220 chr4 83812195 83812648 + 0 NA promoter-TSS (NM_016211) promoter-TSS (NM_016211) -2 NM_014933 22872 Hs.370024 NM_014933 HPRD:15314 SEC31A ABP125|ABP130|HSPC334|SEC31L1 SEC31 homolog A (S. cerevisiae) protein-coding 0.112583 0.680617 106(AGCGACAT,-,0.00) 19(CCTCCTCCCCGG,+,0.00) 8(TCGCCGCC,+,0.00) -11(CGTCGGAC,+,0.00) 115(TTTCCCCG,-,0.00),292(TGGGTAAA,+,0.00) -46(CCTTCGGCAGCC,-,0.00) 140(CCGCCACG,-,0.00) 27(CCGGCCAGGGCC,+,0.00),336(ACCGCCGTGGCC,+,0.00) 20 chr9 66458125 66458484 + 0 NA intron (NR_121647, intron 1 of 4) CpG 1015 NR_121647 103352539 Hs.351215 NR_121647 LINC01410 - long intergenic non-protein coding RNA 1410 ncRNA 0.086351 0.688889 102(TCGCCACCCCGG,+,0.00) 31(TAGACGCC,+,0.00) -32(TCCCGACCCT,+,0.00) 4(GCCGGGCG,+,0.00),115(GCCGCGGG,+,0.00) 109(CCCGGGGCCGCG,+,0.00) 64(AGCCCGGCCC,-,0.00) 45(GGCGCCTGGCTG,+,0.00),73(CAGCCAAGCCCG,-,0.00) 243 chr10 17270264 17270573 + 0 NA 5' UTR (NM_003380, exon 1 of 10) 5' UTR (NM_003380, exon 1 of 10) 160 NM_003380 7431 Hs.455493 NM_003380 HPRD:01899 VIM CTRCT30|HEL113 vimentin protein-coding 0.071197 0.577419 5(CCGACCGC,+,0.00) 115(CTAAACCG,+,0.00) 152(GGCGCGGT,-,0.00) 231 chr7 45151250 45151632 + 0 NA promoter-TSS (NM_199122) promoter-TSS (NM_199122) -95 NM_004749 9238 Hs.231411 NM_004749 HPRD:10263 TBRG4 CPR2|FASTKD4 transforming growth factor beta regulator 4 protein-coding 0.091623 0.621410 34(GCTTCCGGCCAC,-,0.00) 231(CGTAGGCG,-,0.00) -51(TGCGCGGC,-,0.00) 0(GCCTCGCCCCGC,-,0.00) 163 chr19 3985010 3985488 + 0 NA intron (NM_001961, intron 1 of 14) CpG 212 NM_001961 1938 Hs.515070 NM_001961 HPRD:00561 EEF2 EEF-2|EF-2|EF2|SCA26 eukaryotic translation elongation factor 2 protein-coding 0.108787 0.672234 328(GGCGGCGA,-,0.00),331(GGCGACGA,-,0.00) 315(TCGCGCCG,+,0.00) 151(CGCCGCTA,+,0.00) 139(CTCCGGCCCCGC,-,0.00),204(CGTAGGCCCCGC,-,0.00),215(CGGAGGCCCCGC,-,0.00) 227(CGCCGCTCCGGG,-,0.00) 104(AGACATGGCGGC,-,0.00) 144(GCCCCGCCGC,-,0.00),220(GCCCCGCCGC,-,0.00) 109 chr5 170814238 170814611 + 0 NA promoter-TSS (NM_199185) promoter-TSS (NM_199185) -284 NM_002520 4869 Hs.557550 NM_002520 HPRD:01246 NPM1 B23|NPM nucleophosmin (nucleolar phosphoprotein B23, numatrin) protein-coding 0.067024 0.558824 188(GCGGGAGGCCGG,-,0.00) 150(CCGACGCC,+,0.00) 172(GCTGCGCA,+,0.00) 184(CTTGGCGG,+,0.00) 151 chr11 60741884 60742170 + 0 NA intron (NM_001254750, intron 1 of 10) intron (NM_001254750, intron 1 of 10) 2914 NM_001254750 923 Hs.744366 NM_006725 HPRD:01724 CD6 TP120 CD6 molecule protein-coding 0.031469 0.554007 30(CTCCTTCTTCCC,-,0.00) -85(TAGAGACG,-,0.00) 18(ACCGCGCC,+,0.00) 89 chr15 48623690 48623931 + 0 NA promoter-TSS (NM_001948) promoter-TSS (NM_001948) 189 NM_001025248 1854 Hs.527980 NM_001948 HPRD:03165 DUT dUTPase deoxyuridine triphosphatase protein-coding 0.116183 0.698347 32(CTCTCCGGGCCA,-,0.00) 53(CTCGGCCGCG,-,0.00) 45(GCCCGCCCCT,+,0.00) 57(GCCGCGCC,+,0.00),62(GCCGCGCA,+,0.00) -65(CCCTCGCCCCGC,-,0.00) 62(GCCGCGCAGC,-,0.00),120(GCCGCGGAGC,+,0.00) 175 chr6 26198300 26200339 + 0 NA promoter-TSS (NM_003522) promoter-TSS (NM_003522) 202 NM_003530 8351 Hs.532144 NM_003530 HPRD:11905 HIST1H3D H3/b|H3FB histone cluster 1, H3d protein-coding 0.046101 0.474510 998(GAGTCCGGCCCG,-,0.00) 127(AAGTCTCT,+,0.00) 925(GCGCGCCGGCCC,+,0.00) 975(TGTACGCG,-,0.00),1057(CGCGTCCG,+,0.00),1501(CGTGTACG,+,0.00),1678(CGTACGCC,-,0.00) 941(TCGCTCGG,-,0.00) 902(CAACACCG,+,0.00) 770(TTTACCCA,-,0.00) 445(ACCGCGCC,+,0.00) 928(CGCCGGCCCCGA,-,0.00),962(GCGGAGCAAGCG,+,0.00) 746(AACACCGCCC,-,0.00),856(GGGCGGCGTT,+,0.00),977(TACGCGGCCC,-,0.00) 936(CCGACTCG,-,0.00),1007(CCGCGAAG,-,0.00) 148 chr3 46411427 46411670 + 0 NA promoter-TSS (NM_000579) promoter-TSS (NM_000579) -85 NM_000579 1234 Hs.450802 NM_000579 HPRD:03223 CCR5 CC-CKR-5|CCCKR5|CCR-5|CD195|CKR-5|CKR5|CMKBR5|IDDM22 chemokine (C-C motif) receptor 5 (gene/pseudogene) protein-coding 0.012346 0.426230 11(CCGCCAAG,-,0.00) 31 chr1 101702099 101702383 + 0 NA promoter-TSS (NM_001400) promoter-TSS (NM_001400) -64 NM_001400 1901 Hs.154210 NM_001400 HPRD:03578 S1PR1 CD363|CHEDG1|D1S3362|ECGF1|EDG-1|EDG1|S1P1 sphingosine-1-phosphate receptor 1 protein-coding 0.024648 0.480702 -93(AAGTCTCT,+,0.00) 23(GGCTCCGCCC,-,0.00) 35 chr6 134496116 134496448 + 0 NA promoter-TSS (NM_005627) promoter-TSS (NM_005627) -248 NM_001291995 6446 Hs.510078 NM_005627 HPRD:04264 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding 0.129518 0.726727 59(GGCGGAGGGCGC,-,0.00) -89(TGGCGGCT,+,0.00) 70(CGGGGAGGGCCG,-,0.00),212(CCCTCTCCCCGG,+,0.00) -46(GAGGGCGAGCCC,+,0.00) -32(GGCGGGGG,+,0.00) -64(CGGTTCTG,-,0.00) 23(CCATCGGCTCCT,-,0.00) 169(TGCGCGGC,-,0.00) 177(GGCCACGGTGGC,-,0.00) 138(GGTTCGCAGC,-,0.00),156(GCTTCCCGGC,-,0.00) 11 chr12 56323698 56324207 + 0 NA promoter-TSS (NM_001345) promoter-TSS (NM_001345) -994 NM_001345 1606 Hs.524488 NM_001345 HPRD:00517 DGKA DAGK|DAGK1|DGK-alpha diacylglycerol kinase, alpha 80kDa protein-coding 0.005894 0.386275 123(AGAGGCTT,-,0.00) 208 chr17 38478735 38479051 + 0 NA intron (NM_001145301, intron 1 of 8) intron (NM_001145301, intron 1 of 8) 4420 NM_001145301 5914 Hs.654583 NM_000964 RARA NR1B1|RAR retinoic acid receptor, alpha protein-coding 0.031646 0.621451 -33(TCCCGGCCCT,+,0.00) 123(CGGCAGGA,-,0.00) 188(CCCTGTCAGTCC,+,0.00) 78 chr6 57038048 57038312 + 0 NA intron (NM_004282, intron 1 of 2) intron (NM_004282, intron 1 of 2) 1076 NM_004282 9532 Hs.745046 NM_004282 BAG2 BAG-2|dJ417I1.2 BCL2-associated athanogene 2 protein-coding 0.045455 0.490566 75(CGCGGACG,+,0.00) 32(TCGTGCAG,+,0.00) -43(CAAAACCA,+,0.00) 93 chr1 161493548 161493852 + 0 NA promoter-TSS (NM_002155) promoter-TSS (NM_002155) -336 NM_002155 3310 Hs.654614 NM_002155 HPRD:00775 HSPA6 - heat shock 70kDa protein 6 (HSP70B') protein-coding 0.036184 0.413115 4(GAACCCGGGCCT,-,0.00) -93(AGCCACCT,-,0.00) 145(CGGTTTGG,-,0.00) 106 chr22 35795436 35796013 + 0 NA promoter-TSS (NM_006739) promoter-TSS (NM_006739) -392 NM_006739 4174 Hs.517582 NM_006739 HPRD:04075 MCM5 CDC46|P1-CDC46 minichromosome maintenance complex component 5 protein-coding 0.055459 0.519031 430(CCCGGAAGGAGG,-,0.00) 327(GCGCGCCCGCCC,+,0.00) 331(GCCCGCCCCT,+,0.00) 380(CCTTCCCAGC,-,0.00) 157 chr13 113864213 113864548 + 0 NA exon (NM_001008895, exon 2 of 20) exon (NM_001008895, exon 2 of 20) 561 NM_001008895 8451 Hs.339735 NM_003589 HPRD:07218 CUL4A - cullin 4A protein-coding 0.125373 0.750000 -46(TCTCCCTCCGCC,+,0.00) -22(CTCGGCTGCC,-,0.00),95(GGCGGCCGGG,+,0.00) 147(GGGCGGCCGCTC,-,0.00) 217(AGGGCCGGGA,-,0.00) 144(GCCGGGCG,+,0.00) 19(CTGCACGA,-,0.00) 115(CCGCTCCTGCCC,-,0.00) 183(GGGAGCGGAAAG,+,0.00) -85(CTACGCGG,+,0.00),-73(CTTCGCGG,+,0.00),8(CGTGGCGG,+,0.00),24(CGAGGCGG,+,0.00) -74(GCTTCGCGGC,-,0.00),164(GCCTCGCAGG,-,0.00) 141(GCGGCCGGGCGG,+,0.00) 65 chr9 130213375 130214021 + 0 NA promoter-TSS (NM_001005373) promoter-TSS (NM_001005373) 13 NM_000976 6136 Hs.408054 NM_000976 HPRD:01603 RPL12 L12 ribosomal protein L12 protein-coding 0.085139 0.633694 179(TTGGCCTCCTCC,+,0.00) 143(GAACCCGGATTC,+,0.00),190(CGAGCCGAAAGC,+,0.00) -14(AGCGGCTT,-,0.00),125(AGGCGGCT,+,0.00) 99(GGGGTCGA,-,0.00) 158(ACGACCGA,+,0.00) 438(TCCCAGCCCT,+,0.00) 154(CGGGACGA,-,0.00) -40(CAACACCG,+,0.00) 7(CGGGGAAA,+,0.00) 508(AGCCCCGCCC,-,0.00) -53(GGCCGGGGCGGC,-,0.00) 29 chr1 174128624 174129131 + 0 NA promoter-TSS (NR_121197) promoter-TSS (NR_121197) 325 NM_014857 9910 Hs.585378 NM_014857 HPRD:16464 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1-like protein-coding 0.104536 0.728346 -60(CCGCCCTCCTCG,+,0.00),2(GGTGGAGGGTGG,-,0.00),251(TCGGCCGCCTCC,+,0.00) -19(CGGCCCGGCTTC,+,0.00),104(CGGCCCGGCGGC,+,0.00),112(CGGCCCGGATCC,+,0.00) 250(GTCGGCCGCC,-,0.00) 341(TAGTGGCT,+,0.00) 150(GGCGTCGG,-,0.00),316(TCGGCGCC,+,0.00) 183(GGGCCCCAGCCG,+,0.00) 288(CCGCTCCTCGCG,-,0.00) -75(CCCTCTCAGTTC,+,0.00) 152(CGTCGGGC,+,0.00) 310(GCGGGGTCGGCG,+,0.00) 53(CGCGGAGACGTG,+,0.00),115(CCCGGATCCGCG,+,0.00),115(CCCGGATCCGCG,-,0.00) 234(GGGCGGGTTC,+,0.00),308(GGGCGGGGTC,+,0.00) -99(CTGCCAGGCGGC,-,0.00),-20(CCGGCCCGGCTT,+,0.00),103(GCGGCCCGGCGG,+,0.00),134(GCTGCCTGGGTG,+,0.00) 197 chr11 63753812 63754251 + 0 NA intron (NR_003089, intron 1 of 5) CpG 706 NM_017670 55611 Hs.473788 NM_017670 OTUB1 OTB1|OTU1 OTU deubiquitinase, ubiquitin aldehyde binding 1 protein-coding 0.093394 0.713636 136(CGAGGAGGGAGG,-,0.00) -23(CAACCCGGAAGC,+,0.00),116(GATGCCGGGCCA,-,0.00) 17(GGCGGCGGAG,+,0.00) -42(CCGGGAGGACGG,-,0.00),258(CCGGGAGGGAGC,-,0.00) 169(GGGGTCGA,-,0.00) -13(GCGGTCGG,-,0.00) 251(CCCCCGGC,-,0.00),290(CCCGCGGC,-,0.00) 126(CAGCTGCTCCCG,-,0.00) -90(CGTTGCTA,+,0.00) 119(GCCGGGCCAGCT,+,0.00),322(GCGGGGCCTGGG,+,0.00) 275(CGAGGCGG,+,0.00) -75(TGCCAAGGCGGG,-,0.00) 324(GGGGCCTGGGTC,+,0.00) 203 chr3 57541732 57541982 + 0 NA promoter-TSS (NM_177966) promoter-TSS (NM_177966) -124 NM_177966 201626 Hs.572993 NM_177966 PDE12 2'-PDE phosphodiesterase 12 protein-coding 0.056000 0.486056 -14(CAAAACCG,+,0.00) 123(CGAGTCGG,+,0.00) 138 chr1 27021866 27022358 + 0 NA promoter-TSS (NM_139135) promoter-TSS (NM_139135) -410 NM_006015 8289 Hs.468972 NM_006015 HPRD:04319 ARID1A B120|BAF250|BAF250a|BM029|C1orf4|ELD|MRD14|OSA1|P270|SMARCF1|hELD|hOSA1 AT rich interactive domain 1A (SWI-like) protein-coding 0.117886 0.718053 46(GGCTCCGGGCCG,-,0.00) -95(GGCGGCCGCG,+,0.00),217(GGCGGCCGCG,+,0.00),327(CTCGCCCGCC,-,0.00) 98(AAGCGGCT,+,0.00),300(TAGCCGCT,+,0.00) 10(CCGGGAGGGAGG,-,0.00) 312(CCGGCCGA,+,0.00),316(CCGACCGC,+,0.00) -60(GCCGCGGG,+,0.00) 258(TCGTGTCG,+,0.00) 2(TAGGGACG,-,0.00) 206(CGGGTTTG,-,0.00) -56(CGGGTAAA,+,0.00),234(TGGGTAAA,+,0.00) 40(TGCGCGGG,-,0.00),341(GCCGCGCA,+,0.00) 42(CGCGGGCTCCGG,-,0.00),185(CGCCCGCTCCGC,-,0.00) 52(GGGCCGGGTT,+,0.00) -98(CGAGGCGG,+,0.00),222(CCGCGACG,-,0.00),259(CGTGTCGG,+,0.00) -101(GGCCGAGGCGGC,-,0.00) 78(GCGGCGGCGC,+,0.00),341(GCCGCGCAGC,-,0.00) 199 chr8 101734044 101734328 + 0 NA 5' UTR (NM_002568, exon 1 of 15) 5' UTR (NM_002568, exon 1 of 15) 129 NM_002568 26986 Hs.387804 NM_002568 HPRD:05247 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein, cytoplasmic 1 protein-coding 0.070423 0.494737 -54(GCGGGCGGGCGG,-,0.00),157(CCGGGGAGAAGG,-,0.00) -57(GCCGCGGG,+,0.00),21(GGCGGGGG,+,0.00) 25(GGGGAGACGCGG,+,0.00),159(GGGGAGAAGGGG,+,0.00) 139(CACTCTCAGCAC,+,0.00) -62(GCGGGGCCGCGG,+,0.00) -63(TGCGGGGCCGCG,+,0.00) -65(GCTGCGGGGC,+,0.00) 114 chr7 56118878 56119174 + 0 NA promoter-TSS (NM_001762) promoter-TSS (NM_001762) 242 NM_004577 5723 Hs.512656 NM_004577 HPRD:01406 PSPH PSP|PSPHD phosphoserine phosphatase protein-coding 0.060811 0.572391 45(CTTCGCTA,+,0.00) 226 chr3 47822643 47822951 + 0 NA intron (NM_003074, intron 1 of 27) intron (NM_003074, intron 1 of 27) 608 NM_003074 6599 Hs.476179 NM_003074 HPRD:03435 SMARCC1 BAF155|CRACC1|Rsc8|SRG3|SWI3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 protein-coding 0.058442 0.550162 75(TAGTGGCT,+,0.00) 176(CCGGGATCGCGG,-,0.00) 166(CAGTCAGGCCCC,-,0.00) 58 chr3 49066646 49066878 + 0 NA TTS (NM_017730) TTS (NM_017730) 113 NM_000884 3615 Hs.654400 NM_000884 HPRD:00895 IMPDH2 IMPD2|IMPDH-II IMP (inosine 5'-monophosphate) dehydrogenase 2 protein-coding 0.094828 0.639485 117(AGCCGATT,-,0.00) -16(GTCCGTCG,-,0.00),-1(CGTAGGAC,+,0.00) 70(ACCGCGCC,+,0.00),99(GCCGCGCC,+,0.00) 97(GGGCCGCGCC,+,0.00) 28(TCGGCCATGGCC,+,0.00) 211 chr19 1848464 1848878 + 0 NA promoter-TSS (NM_020695) promoter-TSS (NM_020695) -219 NM_020695 57455 Hs.192477 NM_020695 HPRD:15478 REXO1 ELOABP1|EloA-BP1|REX1|TCEB3BP1 REX1, RNA exonuclease 1 homolog (S. cerevisiae) protein-coding 0.099034 0.691566 58(GGGCAGGGGCTG,-,0.00),142(GAGCCCCAGGCC,+,0.00) 106(CCGCCCGA,+,0.00) 22(TGGGCCGGGA,-,0.00) 38(GCCGCGGG,+,0.00) 127(TAGCGGCG,-,0.00) 157(GCGGCGCCAGGG,+,0.00),200(CGCGGGGCCCGC,-,0.00),201(GCGGGGCCCGCT,+,0.00) 159(GGCGCCAGGGCT,+,0.00) 100(GCGCCGCCGC,-,0.00) 153 chr22 47132347 47132590 + 0 NA intron (NM_022766, intron 1 of 12) intron (NM_022766, intron 1 of 12) 1684 NM_022766 64781 Hs.200668 NM_022766 HPRD:09878 CERK LK4|dA59H18.2|dA59H18.3|hCERK ceramide kinase protein-coding 0.012346 0.540984 15 chr19 2478794 2478996 + 0 NA TTS (NM_015675) TTS (NM_015675) 2772 NM_015675 4616 Hs.110571 NM_015675 HPRD:05382 GADD45B GADD45BETA|MYD118 growth arrest and DNA-damage-inducible, beta protein-coding 0.054455 0.546798 -28(GCCTCCGGGCCA,-,0.00) 41(AGCCACCT,-,0.00) 70(GGCGCGGT,-,0.00) 137 chr17 79829285 79829682 + 0 NA promoter-TSS (NM_001185078) promoter-TSS (NM_001185078) -201 NM_001301240 396 Hs.159161 NM_004309 HPRD:03565 ARHGDIA GDIA1|HEL-S-47e|NPHS8|RHOGDI|RHOGDI-1 Rho GDP dissociation inhibitor (GDI) alpha protein-coding 0.125945 0.731156 151(GGCGGCCGCG,+,0.00) 1(GGCGTCGT,-,0.00),140(TCGAGGCC,+,0.00) 62(CCTACGCG,-,0.00) -102(TCGGGCGG,-,0.00),211(TCGGTCCG,-,0.00) -61(GCCGGGGG,+,0.00) -48(CGTCGCCA,+,0.00) 214(GTCCGACT,-,0.00) -78(TGCGCGGC,-,0.00),174(CCCGCGCA,+,0.00) -90(GGCCAGGGCGCA,-,0.00),71(GCCCAGGGCGCC,-,0.00) 81 chr21 30445615 30445945 + 0 NA 5' UTR (NM_001282907, exon 1 of 16) 5' UTR (NM_001282907, exon 1 of 16) 338 NM_001282909 10694 Hs.125113 NM_006585 HPRD:10816 CCT8 C21orf112|Cctq|D21S246|PRED71 chaperonin containing TCP1, subunit 8 (theta) protein-coding 0.084848 0.637462 -77(TCGGCCTTCTCC,+,0.00) -31(GGTGGCCGAG,+,0.00),76(CGCGGCCGCC,-,0.00) 17(CCCCCGGC,-,0.00) -93(TCGTGCCG,+,0.00) 41(CACGCTCAGCCC,+,0.00) -41(CGCAGGCTCCGG,-,0.00),26(GCTGAGCCAGGG,+,0.00) 187(AGCGCCATGGCC,+,0.00) 60 chr17 16342414 16342597 + 0 NA promoter-TSS (NR_002744) promoter-TSS (NR_002744) 204 NR_027169 125144 Hs.368934 NM_152350 HPRD:17549 LRRC75A-AS1 C17orf45|C17orf76-AS1|FAM211A-AS1|NCRNA00188|TSAP19 LRRC75A antisense RNA 1 ncRNA 0.092896 0.668478 -54(CCGGGAAGCCTG,-,0.00) 25(CGGCGGGCGCTG,-,0.00) 42(CGGTATTG,-,0.00) -11(CGTGGCTCCCCG,-,0.00) 101 chr2 44223291 44223636 + 0 NA promoter-TSS (NM_133259) promoter-TSS (NM_133259) -319 NM_133259 10128 Hs.368084 NM_133259 HPRD:06343 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine-rich pentatricopeptide repeat containing protein-coding 0.063768 0.557803 27(AGAGGCTT,-,0.00) 113(CCCCCGCC,-,0.00) 194(AACGCGGGCC,-,0.00) 156(GACGCCATGTCC,+,0.00) 73 chr8 144699645 144700122 + 0 NA promoter-TSS (NM_003313) promoter-TSS (NM_003313) -151 NM_003313 7264 Hs.404119 NM_003313 HPRD:00654 TSTA3 FX|P35B|SDR4E1 tissue specific transplantation antigen P35B protein-coding 0.136268 0.763598 96(CTCGTCCGCC,-,0.00) -72(AGCGGCTT,-,0.00),75(AAGCCGCT,+,0.00),76(AGCCGCTT,-,0.00) 22(CCGGGGGCGCGC,-,0.00) 246(GGCGTCGG,-,0.00) 211(GAGGGCCAGCCG,+,0.00) -20(GGGGCCGGGA,-,0.00) 241(CCCGCGGC,-,0.00) 352(TCGCGCCG,+,0.00) 99(GTCCGCCG,-,0.00),248(CGTCGGAA,+,0.00) 73(CAAAGCCG,+,0.00) -88(CCGCCGGCTCCC,-,0.00) -39(GCGGAGCCAGGT,+,0.00),-22(GCGGGGCCGGGA,+,0.00),102(CGCCGGCCGCGC,-,0.00) -40(CGCGGAGCCAGG,+,0.00) 354(GCGCCGCAGC,-,0.00) 273(GGGGCCAGGCGG,+,0.00) 86 chr3 130060306 130060476 + 0 NA Intergenic Intergenic -3968 NM_001278298 256076 Hs.205403 NM_153264 HPRD:08196 COL6A5 COL29A1|VWA4 collagen, type VI, alpha 5 protein-coding 0.000000 0.368421 19(GGGTTTTG,-,0.00) 76 chr11 10480663 10481105 + 0 NA intron (NM_001025390, intron 1 of 14) intron (NM_001025390, intron 1 of 14) -1794 NM_001172430 272 Hs.501890 NM_000480 HPRD:00041 AMPD3 - adenosine monophosphate deaminase 3 protein-coding 0.006787 0.544018 184(GAGCTGAGAGGG,-,0.00) 62 chr1 19577892 19578590 + 0 NA promoter-TSS (NM_015047) promoter-TSS (NM_015047) 166 NM_016183 51154 Hs.463797 NM_016183 HPRD:12725 MRTO4 C1orf33|MRT4|dJ657E11.4 mRNA turnover 4 homolog (S. cerevisiae) protein-coding 0.104585 0.682403 64(TCCGCCTCCGCG,+,0.00) -2(CTCAGCCGCC,-,0.00) 1(AGCCGCCA,-,0.00),537(AGGTGGCT,+,0.00) 33(CCGCCGTCCCGG,+,0.00),65(CCGCCTCCGCGG,+,0.00) 243(GAGGGGCAGCCC,+,0.00) -96(CACGTACG,+,0.00),-94(CGTACGCA,-,0.00) 108(TCGGTCGG,-,0.00),112(TCGGACGG,-,0.00),550(CCGGTCGG,-,0.00) 55(GCCGCGGG,+,0.00),441(GGCGGGGG,+,0.00) 304(CACCGTCTTCCG,-,0.00) -6(CCCACTCAGCCG,+,0.00) 110(GGTCGGAC,+,0.00),111(GTCGGACG,-,0.00) 525(TAAAACCG,+,0.00) -17(GAAACGAGAAGC,+,0.00) 50(ACCGCGCC,+,0.00) 57(CGCGGGCTCCGC,-,0.00) 2(GCCGCCATGATG,+,0.00) 489(GCCTCGCTGC,-,0.00) 191(GCGGCTTGGCAG,+,0.00),486(GCTGCCTCGCTG,+,0.00) 247 chr16 89788479 89788682 + 0 NA intron (NR_110129, intron 1 of 10) CpG 628 NM_001113525 92822 Hs.290154 NM_152287 HPRD:12235 ZNF276 CENP-Z|CENPZ|ZADT|ZFP276|ZNF477 zinc finger protein 276 protein-coding 0.118227 0.725490 87(GGAGGAGGGTGC,-,0.00) 57(CAGCGCCTGCCC,+,0.00) -20(TCGTGCCC,+,0.00) -81(CGCTGTCACCGC,-,0.00) -11(CGCGGAGCCGGA,+,0.00) 67 chr2 101618438 101619027 + 0 NA promoter-TSS (NM_001099693) promoter-TSS (NM_001099693) 41 NM_001098577 6160 Hs.469473 NM_000993 HPRD:17994 RPL31 L31 ribosomal protein L31 protein-coding 0.067912 0.613559 -79(TGGCCCTGCTCC,+,0.00) 154(CGACCCGGAAGT,+,0.00),437(ATTTCCGGGTCG,-,0.00) -94(AAGTCTCT,+,0.00) 65(ACGACGCC,+,0.00) 324(CCGAGCCAGCCC,+,0.00) 61(CGCCACGA,-,0.00) 47(CAAAAGCG,+,0.00),343(CGGTTGTG,-,0.00) -40(TTTATCCG,-,0.00) 418(GGGAGCCGGAGC,+,0.00) -82(CCCTGGCCCTGC,-,0.00),77(AGCTGGCCCCAC,-,0.00) 53(CGCGGCCCCGCC,-,0.00) 51(AGCGCGGCCC,-,0.00) -6(CTTCGCGG,+,0.00),60(CCGCCACG,-,0.00) 326(GAGCCAGCCCGG,-,0.00) 204 chr19 55770530 55770809 + 0 NA promoter-TSS (NM_014931) promoter-TSS (NM_014931) -631 NM_014931 22870 Hs.515610 NM_014931 HPRD:17207 PPP6R1 KIAA1115|PP6R1|SAP190|SAPS1 protein phosphatase 6, regulatory subunit 1 protein-coding 0.093190 0.607143 -67(TGCCCCGGAATA,+,0.00) 154(TCGTTCCG,+,0.00) -30(GCTGCGCA,+,0.00) 241 chr15 63796014 63796908 + 0 NA promoter-TSS (NR_046341) promoter-TSS (NR_046341) -249 NR_046341 9960 Hs.458499 NM_006537 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding 0.092841 0.654749 641(GGCGGGCGAG,+,0.00),711(GTCGGCCGAG,+,0.00) 58(AGGTGGCT,+,0.00) 175(CCGCCTCCCCCG,+,0.00),405(CACCCTTCCCGG,+,0.00),419(CCGGGGAAGCGG,-,0.00),526(CCGGGGGCGGGG,-,0.00) 396(TCGGCGCC,+,0.00) 372(CGCGGACG,+,0.00) 137(TCGGGCGG,-,0.00) 513(GGCGGGGG,+,0.00),721(CGCCCGGC,-,0.00) 507(GGGCTGGGCGGG,-,0.00),535(GGGCGGGGAGGG,-,0.00) -42(GTCCTACG,-,0.00),710(CGTCGGCC,+,0.00) 196(CCTTGGCCTCCC,-,0.00) 184(CCGGGGCCAGGC,+,0.00),413(CCGGGGCCGGGG,+,0.00) 318(CCGAGTAG,-,0.00) 165 chr12 56520017 56520186 + 0 NA Intergenic Intergenic -1885 NM_015292 23344 Hs.632729 NM_015292 HPRD:14367 ESYT1 FAM62A|MBC2 extended synaptotagmin-like protein 1 protein-coding 0.005917 0.523529 -49(AGACACTT,-,0.00) 198 chr14 23235510 23235924 + 0 NA promoter-TSS (NM_005015) promoter-TSS (NM_005015) -14 NM_005015 5018 Hs.151134 NM_005015 HPRD:03043 OXA1L OXA1 oxidase (cytochrome c) assembly 1-like protein-coding 0.043478 0.462651 142(TTTACCCA,-,0.00),291(CGGGCAAA,+,0.00) 261(ACTGCGCA,+,0.00) 162(CCGCCAAG,-,0.00) 139 chr3 69133928 69134167 + 0 NA promoter-TSS (NM_006407) promoter-TSS (NM_006407) -43 NM_006407 10550 Hs.518060 NM_006407 HPRD:09303 ARL6IP5 DERP11|GTRAP3-18|JWA|PRAF3|addicsin|hp22|jmx ADP-ribosylation factor-like 6 interacting protein 5 protein-coding 0.058577 0.554167 64(CCGACCGA,+,0.00) -82(CGTCTCTA,+,0.00) 59(CAAAGCCG,+,0.00) -44(GGTTCCTGTTTT,-,0.00) 119(CGCCGCCGCCGC,-,0.00),122(CGCCGCCGCCGC,-,0.00) 68(CCGAGACG,-,0.00) 129 chr10 104404457 104405064 + 0 NA exon (NM_030912, exon 1 of 6) exon (NM_030912, exon 1 of 6) 508 NM_030912 81603 Hs.336810 NM_030912 HPRD:06934 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding 0.093904 0.672697 -2(GAAGCCGGGCCT,-,0.00) -46(AGCGGCCT,-,0.00) -40(CTCGTACG,+,0.00),-38(CGTACGCT,-,0.00),394(CCTACGCG,-,0.00) 163(GTCCCACG,-,0.00),352(GTGCGACG,-,0.00) 362(GAGATCCGAAGG,+,0.00) 119(CCCGCGCA,+,0.00) 72(CGCCGGCGGCGC,-,0.00),114(CGCTGCCCGCGC,-,0.00) 104(CGCGGCCCCCCG,-,0.00) 99(GCCGCCGCGGCC,+,0.00) 141(GCTGCGAGGC,+,0.00) 2 chr12 40014914 40015161 + 0 NA Intergenic AluSz6|SINE|Alu -1194 NM_005164 225 Hs.117852 NM_005164 ABCD2 ABC39|ALDL1|ALDR|ALDRP|hALDR ATP-binding cassette, sub-family D (ALD), member 2 protein-coding 0.024291 0.552419 -57(TGGCACGA,-,0.00) 65(GGGTTTTG,-,0.00) -33(CCTCCGCCTCCC,-,0.00),123(CCTTAGCCTCCC,-,0.00) -2(CCGAGTAG,-,0.00) 17 chr1 65431583 65431759 + 0 NA intron (NM_002227, intron 1 of 24) CpG 516 NM_002227 3716 Hs.207538 NM_002227 HPRD:00992 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding 0.096591 0.655367 -79(GAGCTGGCGGTC,-,0.00) 47(CGTGCGCG,-,0.00) -47(TAGGGACG,-,0.00) 49(TGCGCGCT,-,0.00) 186 chr17 21191105 21191622 + 0 NA promoter-TSS (NM_002756) promoter-TSS (NM_002756) 15 NM_002756 5606 Hs.514012 NM_002756 HPRD:03816 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding 0.030948 0.644788 388(GGGCAGGCCCTC,-,0.00) 395(CCCTCTGTGCCC,+,0.00) 364(CCTCGGAC,+,0.00) 172(GCCGGGGCAGCG,+,0.00) 110 chr2 10588826 10589276 + 0 NA promoter-TSS (NM_002539) promoter-TSS (NM_002539) -371 NM_001287188 4953 Hs.467701 NM_002539 HPRD:01324 ODC1 ODC ornithine decarboxylase 1 protein-coding 0.080000 0.674058 309(GGACCCGGATCC,+,0.00) 181(AGCCGCCT,-,0.00) 188(TCCACGCC,+,0.00) -40(TCGTGCCC,+,0.00) 49(GCCGCCCA,+,0.00),332(GCCGCCCA,+,0.00) 15(CGTGGGCCCCGC,-,0.00) 82 chr11 33744229 33744408 + 0 NA promoter-TSS (NM_001127223) promoter-TSS (NM_001127223) -45 NM_001127223 966 Hs.278573 NM_000611 CD59 16.3A5|1F5|EJ16|EJ30|EL32|G344|HRF-20|HRF20|MAC-IP|MACIF|MEM43|MIC11|MIN1|MIN2|MIN3|MIRL|MSK21|p18-20 CD59 molecule, complement regulatory protein protein-coding 0.005587 0.505556 30(CTTCTCGG,+,0.00) 147 chr1 40505281 40505496 + 0 NA promoter-TSS (NM_006367) promoter-TSS (NM_006367) -867 NM_001105530 10487 Hs.370581 NM_006367 HPRD:09869 CAP1 CAP|CAP1-PEN CAP, adenylate cyclase-associated protein 1 (yeast) protein-coding 0.065116 0.550926 -71(AGGGGCGGGA,-,0.00),35(TCCCGGCCCA,+,0.00) 106(CCGAGTAG,-,0.00) 228 chr6 43138882 43139117 + 0 NA promoter-TSS (NM_003131) promoter-TSS (NM_003131) -34 NM_003131 6722 Hs.520140 NM_003131 HPRD:02788 SRF MCM1 serum response factor (c-fos serum response element-binding transcription factor) protein-coding 0.085106 0.656780 66(CTCCGCCGCC,-,0.00),108(CTCGGCCGCG,-,0.00) 3(AGCGGCCT,-,0.00) -20(GCGCTGGGGCTC,-,0.00) 85(TCCCGGCCCC,+,0.00) -27(GGCGGGGG,+,0.00) 68(CCGCCGCCAGCG,+,0.00) 105(CGTCTCGG,+,0.00) 236 chr22 50624066 50624265 + 0 NA promoter-TSS (NM_025204) promoter-TSS (NM_025204) -195 NM_025204 80305 Hs.517731 NM_025204 HPRD:11450 TRABD LP6054|PP2447 TraB domain containing protein-coding 0.125628 0.750000 -10(GGACCCGGGAGC,+,0.00) -6(CCGGGAGCGCCG,-,0.00),3(CCGGGGGGGGGG,-,0.00) 2(GCCGGGGG,+,0.00),20(GGCGGGGG,+,0.00) 56(GTCCGAAG,-,0.00) 22(CGGGGGCCCCGC,-,0.00) 218 chr19 3178750 3178951 + 0 NA exon (NM_003775, exon 1 of 1) exon (NM_003775, exon 1 of 1) 114 NM_003775 8698 Hs.662006 NM_003775 HPRD:04779 S1PR4 EDG6|LPC1|S1P4|SLP4 sphingosine-1-phosphate receptor 4 protein-coding 0.099502 0.762376 61(GGAGGATGGCGG,-,0.00) 44(GCCGGGCG,+,0.00) 32(TCGGGCCG,+,0.00) -93(CGTCGGGC,+,0.00) 54(GGGGGCCGGAGG,+,0.00) 69(GCGGCCTGGGGG,+,0.00) 202 chr3 167452511 167452724 + 0 NA promoter-TSS (NM_005025) promoter-TSS (NM_005025) 13 NM_145860 11235 Hs.478150 NM_007217 HPRD:10141 PDCD10 CCM3|TFAR15 programmed cell death 10 protein-coding 0.056338 0.607477 50(GCGACGCC,+,0.00) -102(TCAGCCATGGCC,+,0.00),-100(AGCCATGGCCCC,-,0.00) 168 chr1 155220532 155220721 + 0 NA intron (NM_198264, intron 5 of 8) intron (NM_198264, intron 5 of 8) 4648 NM_001267608 10712 Hs.348308 NM_006589 HPRD:08511 FAM189B C1orf2|COTE1 family with sequence similarity 189, member B protein-coding 0.031746 0.678947 -92(CTCCGACG,-,0.00) -18(TGGGCGGC,-,0.00) 184 chr17 61776739 61776922 + 0 NA promoter-TSS (NR_046273) promoter-TSS (NR_046273) 689 NM_030576 80774 Hs.591166 NM_030576 HPRD:14407 LIMD2 - LIM domain containing 2 protein-coding 0.038251 0.684783 16(TCACCCACCTCC,+,0.00) -99(AGCCCGGCCC,-,0.00) -100(CAGCCCGGCCCC,-,0.00) 135 chr15 60690001 60690322 + 0 NA promoter-TSS (NM_001136015) promoter-TSS (NM_001136015) 24 NM_001002858 302 Hs.511605 NM_004039 HPRD:01061 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding 0.096573 0.745342 -75(GCCTCCGGGGCC,-,0.00) 55(GAGCTGAGAGCG,-,0.00) 110(TATACCCG,-,0.00) -98(CCTTCAGCCCCC,-,0.00) 23(GGCGCGCCCCGC,-,0.00),142(GGCCCGCCCCGC,-,0.00) 4(GCCCATCGCGGG,-,0.00) -56(GGGGCCTCCCTG,+,0.00),-47(CTGCCAGGCCGT,-,0.00) 14 chr19 45971363 45972053 + 0 NA 5' UTR (NM_001114171, exon 1 of 3) 5' UTR (NM_001114171, exon 1 of 3) 455 NM_006732 2354 Hs.590958 NM_006732 HPRD:01270 FOSB AP-1|G0S3|GOS3|GOSB FBJ murine osteosarcoma viral oncogene homolog B protein-coding 0.053623 0.575977 407(GACTCCGGCTCC,-,0.00) 139(AGCGGCAT,-,0.00) 213(GCTCCTTCCCCG,+,0.00) 15(CGGACGCG,-,0.00) 3(CGTGGGAC,+,0.00),12(CGCCGGAC,+,0.00),108(GTCCTACG,-,0.00) 391(TTTCCCCG,-,0.00) 408(ACTCCGGCTCCC,-,0.00) 329(GCTTCCCGGC,-,0.00) 112 chr10 120938089 120938333 + 0 NA intron (NM_006793, intron 1 of 6) CpG 166 NM_014098 10935 Hs.523302 NM_006793 HPRD:05305 PRDX3 AOP-1|AOP1|HBC189|MER5|PRO1748|SP-22|prx-III peroxiredoxin 3 protein-coding 0.094262 0.677551 122(CTCGGGCGCC,-,0.00) -66(AGGCCTCT,+,0.00),103(AGCCGCCA,-,0.00) -75(CCCGGAGGGAGG,-,0.00) 44(TCCACGCC,+,0.00) -102(CGGTTCTG,-,0.00) -52(GTTACCCG,-,0.00) 69 chr15 83208754 83209491 + 0 NA promoter-TSS (NR_111943).2 promoter-TSS (NR_111943).2 86 NR_111943 6218 Hs.433427 NM_001021 HPRD:01600 RPS17 DBA4|RPS17L|RPS17L1|RPS17L2|S17 ribosomal protein S17 protein-coding 0.094980 0.658537 289(GGAGGATGGCGG,-,0.00) 391(AAGCCGCT,+,0.00),392(AGCCGCTT,-,0.00) 220(GCGCCTTCCCGG,+,0.00) 86(GGCGCCGA,-,0.00),299(GGCCTCGA,-,0.00) 92(GAGCCCCGGCCG,+,0.00) 17(CGAACGCG,-,0.00) 226(TCCCGGCCCA,+,0.00) 158(GCCGGGCG,+,0.00),401(CGCCCGGC,-,0.00) 6(CGGTTTTG,-,0.00) 146(CGGCTAAA,+,0.00) 528(CTTTCCGCTCCC,-,0.00) 348(GAAACAGGAAGC,+,0.00) 118(CGCCGGCTGCGC,-,0.00),463(GCGGGGGCGGCG,+,0.00) 21(CGCGGCCCTGCG,-,0.00),88(CGCCGAGCCCCG,+,0.00) -9(GGGCCGCCTT,+,0.00),19(AACGCGGCCC,-,0.00) 425(CTACTCGG,+,0.00) -14(GACCCGGGCCGC,-,0.00) 191 chr5 180230802 180231186 + 0 NA promoter-TSS (NM_001114620) promoter-TSS (NM_001114620) -92 NM_001114620 4245 Hs.519818 NM_002406 HPRD:01189 MGAT1 GLCNAC-TI|GLCT1|GLYT1|GNT-1|GNT-I|MGAT mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase protein-coding 0.046875 0.612987 121(TCGTGCAG,+,0.00) 193(CAAAACTG,+,0.00) 172 chr19 49469047 49469447 + 0 NA intron (NM_000146, intron 2 of 3) CpG-14126 681 NM_000146 2512 Hs.433670 NM_000146 HPRD:00616 FTL LFTD|NBIA3 ferritin, light polypeptide protein-coding 0.072500 0.578554 -5(GGCGGCCGCG,+,0.00) -100(ATGTGGCT,+,0.00),-80(AGCCACTT,-,0.00) 66(CGTGCGCG,-,0.00) 173(TCGTGCAG,+,0.00) -78(CCACTTCTTCCG,-,0.00) 220(TAGGGACG,-,0.00) -17(CAAAACCA,+,0.00),130(CGGTCTTG,-,0.00) -8(CGTGGCGG,+,0.00) 145 chr16 29757321 29757803 + 0 NA promoter-TSS (NM_175900) promoter-TSS (NM_175900) -222 NM_175900 283897 Hs.331095 NM_175900 HPRD:08183 C16orf54 - chromosome 16 open reading frame 54 protein-coding 0.035270 0.581781 344(GGCGGCTGAG,+,0.00) 343(AGGCGGCT,+,0.00) 153(GAAAGAGGACGC,+,0.00) 164(CCGGGGCCAGGC,+,0.00) 49 chr7 16685838 16686035 + 0 NA promoter-TSS (NM_020319) promoter-TSS (NM_020319) 177 NM_001159767 28969 Hs.487635 NM_014038 HPRD:16571 BZW2 MST017|MSTP017 basic leucine zipper and W2 domains 2 protein-coding 0.096447 0.702020 32(CCGCCCCGCCGG,+,0.00) -82(CTGCACGA,-,0.00) -47(CGTCGCTA,+,0.00),23(TAGCGACT,-,0.00) -36(CCTCGGAC,+,0.00) 178 chr1 206976825 206976994 + 0 NA intron (NM_153758, intron 1 of 5) intron (NM_153758, intron 1 of 5) 4694 NM_153758 29949 Hs.661017 NM_013371 HPRD:05747 IL19 IL-10C|MDA1|NG.1|ZMDA1 interleukin 19 protein-coding 0.005917 0.535294 51(GGGCTGATGGGG,-,0.00) -25(AAAGAGGCCC,-,0.00) 24 chr3 42642174 42642412 + 0 NA intron (NM_005385, intron 1 of 16) CpG 146 NM_005385 4820 Hs.529509 NM_005385 HPRD:01195 NKTR p104 natural killer cell triggering receptor protein-coding 0.121849 0.719665 15(CGTGCGCG,-,0.00) 127(GCCCCGCCCT,+,0.00) -85(TAGCGGCG,-,0.00),82(TCGCGACG,-,0.00) 119(TCGTCTCAGCCC,+,0.00) 17(TGCGCGCT,-,0.00) 126(AGCCCCGCCC,-,0.00) 33(GCCGCGAGGC,+,0.00) 224 chr15 92401014 92401391 + 0 NA intron (NM_013272, intron 1 of 9) intron (NM_013272, intron 1 of 9) 4264 NM_013272 28232 Hs.311187 NM_013272 HPRD:07502 SLCO3A1 OATP-D|OATP3A1|OATPD|SLC21A11 solute carrier organic anion transporter family, member 3A1 protein-coding 0.005305 0.383598 -99(AAGCCTCT,+,0.00) 187 chr3 50651453 50651759 + 0 NA intron (NM_001243926, intron 3 of 12) intron (NM_001243926, intron 3 of 12) 2313 NM_001243926 7867 Hs.234521 NM_004635 HPRD:03678 MAPKAPK3 3PK|MAPKAP-K3|MAPKAP3|MAPKAPK-3|MK-3 mitogen-activated protein kinase-activated protein kinase 3 protein-coding 0.003268 0.501629 149(CCCTCTCATGCC,+,0.00) -63(GGGTTTTG,-,0.00) 140 chr19 19774484 19774879 + 0 NA promoter-TSS (NM_020410) promoter-TSS (NM_020410) -178 NM_020410 57130 Hs.501794 NM_020410 HPRD:12501 ATP13A1 ATP13A ATPase type 13A1 protein-coding 0.073418 0.646465 161(CCGGCAAGGCGG,-,0.00) 76(GGCGTCGC,-,0.00) 61(CGGAAGAAGAGG,+,0.00) 78(CGTCGCCA,+,0.00) 133(CGCCGGAC,+,0.00) 11(GGCTGGCCCCGG,-,0.00) -34(GCCGCCATGGCA,+,0.00),-32(CGCCATGGCAGC,-,0.00),40(GCCGCCATGACA,+,0.00) 251(GGGGCGAAGC,+,0.00) 9(CAGGCTGGCCCC,-,0.00) 223 chr13 30169005 30169510 + 0 NA intron (NM_003045, intron 1 of 12) CpG 568 NM_003045 6541 Hs.14846 NM_003045 HPRD:00091 SLC7A1 ATRC1|CAT-1|ERR|HCAT1|REC1L solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding 0.128713 0.758893 266(CACTCCGGGGCC,-,0.00) -73(GGCGGCCGGG,+,0.00) -76(CCGGGCGGCCGG,-,0.00),314(CAGCGTTCCCGG,+,0.00) 26(TCGCCGCC,+,0.00) 246(GGGCACCAGCCC,+,0.00) 79(CGCCTACG,+,0.00) 279(GCCCGGCCCT,+,0.00) -92(GCCGCGGG,+,0.00),278(CGCCCGGC,-,0.00) -24(TCGTGGCG,+,0.00) 107(TAGCGGCG,-,0.00) 175(CGGTGTTG,-,0.00) 0(ACCGCGCC,+,0.00) 270(CCGGGGCCCGCC,+,0.00),371(GCGGCGCCAGGG,+,0.00) 115(CGCGGGTCCCCG,-,0.00),360(CGCGGCCCCACG,-,0.00) -23(CGTGGCGG,+,0.00) 350(GCCGCCCTGCCG,+,0.00),373(GGCGCCAGGGCC,+,0.00) -72(GCGGCCGGGCAG,+,0.00) 124 chr5 32585600 32586197 + 0 NA intron (NM_006713, intron 1 of 4) CpG 293 NM_006713 10923 Hs.229641 NM_006713 HPRD:02737 SUB1 P15|PC4|p14 SUB1 homolog (S. cerevisiae) protein-coding 0.117253 0.727425 302(GGCGGCCGGG,+,0.00) 140(TGGCGGCT,+,0.00) 171(CGGCGTCCCCGG,+,0.00),249(CCGGGGAGCCGA,-,0.00),339(CGGCGTCCCCGG,+,0.00) 203(TCCACGCC,+,0.00) -80(CAGCCCCAGCGC,+,0.00),268(CGGCGGGCGCTG,-,0.00) 382(CGCGTGCG,+,0.00) 19(CCGAGCGA,+,0.00) 129(GCCGCGGG,+,0.00),403(CCCCCGCC,-,0.00),467(GCCGGGGG,+,0.00) 73(CCCTCCCAGCCG,+,0.00) 97(CCTTCGGCCCTC,-,0.00) 35(TGCGCGGG,-,0.00) -67(GCGGGGCCGGCG,+,0.00) 250(CGGGGAGCCGAG,+,0.00) 257(CCGAGTCG,-,0.00),263(CGAGGCGG,+,0.00) 122(GGCAATGGCCGC,-,0.00) -70(GCGGCGGGGC,+,0.00) 79(CAGCCGGGCCGT,-,0.00),363(GCGGCCTGCCTA,+,0.00) 104 chr3 127317248 127317609 + 0 NA intron (NR_073375, intron 1 of 15) CpG 228 NR_073375 4171 Hs.477481 NM_004526 HPRD:00303 MCM2 BM28|CCNL1|CDCL1|D3S3194|MITOTIN|cdc19 minichromosome maintenance complex component 2 protein-coding 0.088643 0.662983 -101(AACCACTT,-,0.00) -13(GGGCGGGCGCCG,-,0.00) 152(CCCTGGGCTCCC,-,0.00) 18(TGCGCGCT,-,0.00) 33(CTCTGGCCCCGG,-,0.00) 49(GGGCGGCGCT,+,0.00),171(AGCTCGGCCC,-,0.00) -19(CGTGGCGG,+,0.00) 44(GCCCAGGGCGGC,-,0.00) 131 chr9 99180388 99180682 + 0 NA 5' UTR (NM_153695, exon 1 of 5) 5' UTR (NM_153695, exon 1 of 5) 134 NM_153695 195828 Hs.494557 NM_153695 HPRD:18330 ZNF367 AFF29|CDC14B|ZFF29 zinc finger protein 367 protein-coding 0.095238 0.674576 -35(AGCCACCT,-,0.00) 88(GCCCGGCCCT,+,0.00) -82(TCCTGCCG,+,0.00) 73(GGGAAGCAGCGG,+,0.00) 175(TTTTCCCG,-,0.00) -43(TGCGCAGC,-,0.00) -99(CCGAGTCG,-,0.00) 85(GCGGCCCGGCCC,+,0.00) 181 chr12 122017772 122017951 + 0 NA intron (NM_032590, intron 1 of 22) intron (NM_032590, intron 1 of 22) 503 NM_001005366 84678 Hs.524800 NM_032590 HPRD:12362 KDM2B CXXC2|FBXL10|Fbl10|JHDM1B|PCCX2 lysine (K)-specific demethylase 2B protein-coding 0.011173 0.311111 -83(TTTTCCCG,-,0.00) 234 chr17 76124984 76125425 + 0 NA promoter-TSS (NM_001127198) promoter-TSS (NM_001127198) -343 NM_001127198 11322 Hs.632227 NM_007267 HPRD:08386 TMC6 EV1|EVER1|EVIN1|LAK-4P transmembrane channel-like 6 protein-coding 0.034014 0.579186 118(CCCCCGCC,-,0.00),162(GGCGGGGG,+,0.00) 315(TGTACCCG,-,0.00) 122(CGCCGCCCCCGC,-,0.00) 200(GGGCGGGGTT,+,0.00) 121 chr1 113498454 113498655 + 0 NA promoter-TSS (NR_103744) promoter-TSS (NR_103744) 131 NM_001166496 6566 Hs.75231 NM_003051 HPRD:02816 SLC16A1 HHF7|MCT|MCT1 solute carrier family 16 (monocarboxylate transporter), member 1 protein-coding 0.089552 0.702970 -14(CCTCCCTCCGCC,+,0.00) -22(CTGGGCCGCC,-,0.00) 73(GCGTGCCG,+,0.00) 43(GGGCAGCGAGGG,-,0.00) -63(GTCCGAGG,-,0.00) 79 chr5 102594803 102595072 + 0 NA intron (NM_033211, intron 1 of 2) CpG 495 NM_033211 90355 Hs.482976 NM_033211 HPRD:12383 C5orf30 - chromosome 5 open reading frame 30 protein-coding 0.126394 0.755556 -20(CTGGTAAA,+,0.00) -42(GGCACCCGAAGG,+,0.00) -93(TGGGCGGC,-,0.00) -82(GCGGCCCCAGCG,+,0.00),-8(GTGGGGCCCGCG,+,0.00) -90(GCGGCGGGGC,+,0.00) 212 chr12 2986385 2986778 + 0 NA promoter-TSS (NM_021953) promoter-TSS (NM_021953) 216 NM_001252500 83695 Hs.198853 NM_001252499 HPRD:17487 RHNO1 C12orf32|RHINO RAD9-HUS1-RAD1 interacting nuclear orphan 1 protein-coding 0.094148 0.682741 -41(CTGGTAAGGCGG,-,0.00),10(CCGGGGAGGGGC,-,0.00) 116(TCCTGCCG,+,0.00) -10(GGGAAGAAGTGG,+,0.00) 48(GCGAGCCGAGGG,+,0.00) 4(GTGGGGCCGGGG,+,0.00),101(CCCTGGGCCCGC,-,0.00) 106(GGCCCGCTTT,+,0.00) 154 chr6 139695423 139696108 + 0 NA promoter-TSS (NM_001168389) promoter-TSS (NM_001168389) 22 NM_006079 10370 Hs.82071 NM_006079 HPRD:04245 CITED2 ASD8|MRG-1|MRG1|P35SRJ|VSD2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding 0.102190 0.667638 387(CCGCGTCCCCGC,+,0.00) 143(TCGGCGCC,+,0.00),145(GGCGCCGA,-,0.00) -7(GAGCCCCAGCCA,+,0.00) 545(CCGCCCGA,+,0.00) 477(TCCCGGCCCA,+,0.00) 233(CGCCCGGC,-,0.00),401(CCCGCGGC,-,0.00) 224(CGGCAGGA,-,0.00),405(CGGCACGT,-,0.00) 571(TAGCCACG,-,0.00) 213(CCCTCACAGCTC,+,0.00) 29(CGTTTTTG,-,0.00) -43(CGGGCAAA,+,0.00) 438(GCCGCCCA,+,0.00) 306(GCGGAGCGAGAG,+,0.00),425(GCGGGGCCCGGG,+,0.00) 380(CCCGGAGCCGCG,+,0.00) 328(GGGCGGCGCC,+,0.00) 85(GCTCAGCAGC,-,0.00),422(GCTGCGGGGC,+,0.00) 23 chr11 65190020 65191040 + 0 NA non-coding (NR_028272, exon 1 of 1) non-coding (NR_028272, exon 1 of 1) 261 NR_028272 283131 Hs.523789 NR_002802 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA 0.048039 0.628795 403(GGTGGAGGGGGA,-,0.00) 197(AAGTGGCT,+,0.00) 96(CCGGTGACGCGG,-,0.00),592(CCGGGAGGGCTA,-,0.00) 265(GGGCTGGGGGTG,-,0.00) 744(TCGCTCGG,-,0.00) 588(AGGGCCGGGA,-,0.00) 75(TCGTCCCG,+,0.00) 152(TAGCGACA,-,0.00) 589(GGGCCGGGAGGG,-,0.00) -102(CATTCGCCTCCC,-,0.00) 770(CCGGGCCCAGCC,+,0.00) 802(GGTGCGAAGC,+,0.00) 808(AAGCCAGGCCCC,-,0.00) 96 chr6 392980 393261 + 0 NA non-coding (NR_046000, exon 2 of 10) non-coding (NR_046000, exon 2 of 10) 1381 NM_002460 3662 Hs.401013 NM_002460 HPRD:03543 IRF4 LSIRF|MUM1|NF-EM5 interferon regulatory factor 4 protein-coding 0.131673 0.726950 -79(GACTCCGGGGCC,-,0.00) 86(GGCGGCCGAG,+,0.00) 52(CGCGGACG,+,0.00) 58(CGGCACGC,-,0.00),106(CGGCATGA,-,0.00) 129(GCAACGGGAAGC,+,0.00) 92(CGAGGCGG,+,0.00) -95(GCTTCGCAGC,-,0.00) 126 chr9 101018124 101018392 + 0 NA promoter-TSS (NM_001267571) promoter-TSS (NM_001267571) -255 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family, member 2 protein-coding 0.070896 0.613383 151(GGCGTCGC,-,0.00) 91(TCGGACGG,-,0.00) 89(CCTCGGAC,+,0.00) 132(GCTGGGAGGC,+,0.00) 238 chr22 43583580 43583958 + 0 NA promoter-TSS (NM_015140) promoter-TSS (NM_015140) -632 NM_015140 23170 Hs.517670 NM_015140 HPRD:13782 TTLL12 dJ526I14.2 tubulin tyrosine ligase-like family, member 12 protein-coding 0.092593 0.633245 51(AGGACCGGAAAA,+,0.00),74(CGGCCCGGAAGG,+,0.00) 15(CCGGGAGGGCGG,-,0.00),103(CCGGTGAGGCGG,-,0.00) -47(CGCACGCG,-,0.00) 66(CCCACCGA,+,0.00) 209(CAAAATCG,+,0.00) -78(ACCGCGCC,+,0.00) 159 chr8 21771118 21771367 + 0 NA promoter-TSS (NM_003974) promoter-TSS (NM_003974) -37 NM_003974 9046 Hs.71215 NM_003974 HPRD:05411 DOK2 p56DOK|p56dok-2 docking protein 2, 56kDa protein-coding 0.020080 0.456000 160 chr11 118972718 118972896 + 0 NA promoter-TSS (NM_001382) promoter-TSS (NM_001382) -22 NM_001382 1798 Hs.524081 NM_001382 HPRD:01879 DPAGT1 ALG7|CDG-Ij|CDG1J|CMSTA2|D11S366|DGPT|DPAGT|DPAGT2|G1PT|GPT|UAGT|UGAT dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) protein-coding 0.044944 0.469274 65(CATTCCGGTTCC,-,0.00) 176 chr6 26021741 26022520 + 0 NA TTS (NM_003529) TTS (NM_003529) 223 NM_003538 8359 Hs.248178 NM_003538 HPRD:04157 HIST1H4A H4FA histone cluster 1, H4a protein-coding 0.048780 0.517949 196(AAGCGGAT,+,0.00) -48(TGCGCGCT,-,0.00),428(GCCGCCCA,+,0.00) 184(CGTGGCGG,+,0.00) 47 chr10 43048234 43048531 + 0 NA promoter-TSS (NR_026777) promoter-TSS (NR_026777) -64 NR_026777 100129482 Hs.278064 NR_026777 ENSG00000234420 ZNF37BP KOX21|ZNF37B zinc finger protein 37B, pseudogene pseudo 0.077441 0.540268 -54(AAGCGGCT,+,0.00) 0(TCGCGCCG,+,0.00),46(TCGCGCCG,+,0.00),92(TCGCGCCG,+,0.00) -79(ACCGCGCA,+,0.00) 43(CCCTCGCGCCGC,-,0.00) -55(AAAGCGGCTC,-,0.00) 8 chr12 4381429 4382133 + 0 NA intron (NR_125790, intron 1 of 1) CpG -1121 NM_001759 894 Hs.376071 NM_001759 HPRD:00451 CCND2 KIAK0002 cyclin D2 protein-coding 0.082386 0.672340 112(TCCCCTTCCTCC,+,0.00) 512(AGACACCT,-,0.00) 457(TCCCCCTCCCGG,+,0.00),458(CCCCCTCCCGGG,+,0.00) 267(GGCGGCGA,-,0.00) 23(TCAGTCGG,-,0.00),256(CCGACCGT,+,0.00),519(TCGGGCGG,-,0.00) 579(GCCGCGGG,+,0.00) 321(CGAAACCG,+,0.00) 382(CGGGGAAA,+,0.00) 283(CAGTCGGCTCCC,-,0.00) 144(GGCGCGGT,-,0.00) 574(CGCTGGCCGCGG,-,0.00) 57(CACGCCATGCCC,+,0.00),59(CGCCATGCCCGC,-,0.00) -55(CACCCAGCCCGC,-,0.00) 209 chr1 206730382 206730551 + 0 NA promoter-TSS (NM_182665) promoter-TSS (NM_182665) -26 NM_182665 83593 Hs.497579 NM_031437 HPRD:06117 RASSF5 Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3 Ras association (RalGDS/AF-6) domain family member 5 protein-coding 0.082840 0.700000 -59(GGAGGCGGGGGA,-,0.00),42(GGAGGCGGGGGA,-,0.00) -2(AAGTGGCT,+,0.00) -63(GCGGGGAGGCGG,-,0.00),38(CGCGGGAGGCGG,-,0.00) -56(GGCGGGGG,+,0.00),45(GGCGGGGG,+,0.00) -26(CGGCTTTG,-,0.00) 16(TTTACGCG,-,0.00) -73(CACCCAGGCGGC,-,0.00),-35(CAGCCGAGCCGG,-,0.00) 98 chr1 151811032 151811401 + 0 NA exon (NM_001136003, exon 2 of 2) exon (NM_001136003, exon 2 of 2) 271 NR_024237 100132111 Hs.697059 NR_024237 LOC100132111 - uncharacterized LOC100132111 ncRNA 0.146341 0.781081 124(GCCGCCGGGCCG,-,0.00) 60(CAGCCTTCGCGG,+,0.00),99(GCGGGGAGGCCG,-,0.00) 213(GGGCAGGCGCTT,-,0.00) -30(GCCGCGGG,+,0.00),-18(CCCCCGGC,-,0.00),132(GCCGCGGG,+,0.00) 120(ACGTGCCG,+,0.00) 159(GGGAGCCGAGGC,+,0.00) 107(GCCGCGCC,+,0.00) 229(GCGGGCCCGGGG,+,0.00) 126(CGCCGGGCCGCG,+,0.00) 64(CTTCGCGG,+,0.00),115(CCGCCACG,-,0.00),165(CGAGGCGG,+,0.00) -81(GGGGCCCGGCAG,+,0.00),68(GCGGCCCGCCAG,+,0.00),125(CCGCCGGGCCGC,-,0.00) 216 chr1 25291402 25291946 + 0 NA promoter-TSS (NM_001031680) promoter-TSS (NM_001031680) -173 NM_001031680 864 Hs.170019 NM_004350 HPRD:02565 RUNX3 AML2|CBFA3|PEBP2aC runt-related transcription factor 3 protein-coding 0.040441 0.592661 40(GGCGGCCGGG,+,0.00) 385(AAGCGGTT,+,0.00) 44(GCCGGGGG,+,0.00) 78(CCCGCGCA,+,0.00) 212(GGGCCGCGGT,+,0.00),360(CACGCGGCCC,-,0.00) 87(GGCCCTGGAGGC,-,0.00) -60(GCTCCGAAGC,+,0.00) 37 chr20 1640996 1641259 + 0 NA Intergenic Intergenic -2702 NM_001039508 55423 Hs.590883 NM_018556 ENSG00000089012 SIRPG CD172g|SIRP-B2|SIRPB2|SIRPgamma|bA77C3.1 signal-regulatory protein gamma protein-coding 0.003802 0.352273 117 chr11 32112848 32113420 + 0 NA intron (NM_002901, intron 1 of 5) CpG 657 NM_002901 5954 Hs.97887 NM_002901 HPRD:04111 RCN1 HEL-S-84|PIG20|RCAL|RCN reticulocalbin 1, EF-hand calcium binding domain protein-coding 0.092657 0.694590 -79(GGAGCTGGGCGA,-,0.00) 274(GCGGGGAGGCGA,-,0.00),453(CCGGGGAGAAGG,-,0.00) 156(GGCCTCGA,-,0.00),239(TCGCCGCC,+,0.00) 186(GCGCTGGGGCTC,-,0.00),319(GAGGGCCCGCCC,+,0.00) 299(GCCGCGGG,+,0.00) -90(CGGCCCGA,-,0.00) 87(GTCCGAGG,-,0.00) 247(GCCGCGCC,+,0.00) -76(GCTGGGCGAGCG,+,0.00),53(CCGCGGCCAGGG,+,0.00),240(CGCCGCCGCCGC,-,0.00) 180(AACTCGGCGC,-,0.00) -86(CCGACTCG,-,0.00),-85(CGACTCGG,+,0.00) 55(GCGGCCAGGGCC,+,0.00),57(GGCCAGGGCCCC,-,0.00),95(GCCGCCTGGGCG,+,0.00) 43 chr9 117692685 117692958 + 0 NA promoter-TSS (NM_001244) promoter-TSS (NM_001244) 54 NM_001244 944 Hs.494901 NM_001244 TNFSF8 CD153|CD30L|CD30LG tumor necrosis factor (ligand) superfamily, member 8 protein-coding 0.036630 0.518248 49(AGGTGGCT,+,0.00) 69(CGCGTAGG,+,0.00) 195 chr7 45018580 45019167 + 0 NA promoter-TSS (NM_033054) promoter-TSS (NM_033054) -169 NM_033054 64005 Hs.37617 NM_033054 HPRD:17622 MYO1G HA2|HLA-HA2|MHAG myosin IG protein-coding 0.027257 0.573129 -12(CCAGCCTCCTCC,+,0.00) 162(GGGGCCGGATGC,+,0.00) -28(CCCCCGCC,-,0.00) 93(GCTTCCTGTCCC,-,0.00) -26(CCCGCCCTGCCC,+,0.00) 5 chr3 119013619 119013930 + 0 NA exon (NM_020754, exon 1 of 12) exon (NM_020754, exon 1 of 12) 554 NM_020754 57514 Hs.668218 NM_020754 HPRD:16697 ARHGAP31 AOS1|CDGAP Rho GTPase activating protein 31 protein-coding 0.057878 0.589744 -9(GGCGGCAGAG,+,0.00) 72(AGCCGCCA,-,0.00) -69(GCCGCGGG,+,0.00),152(CCCCCGCC,-,0.00) -75(CCCAGAGCCGCG,+,0.00) -69(GCCGCGGGGC,+,0.00) 170 chr17 27220613 27220836 + 0 NA intron (NM_004475, intron 1 of 10) LTR2B|LTR|ERV1 3991 NM_004475 2319 Hs.514038 NM_004475 HPRD:00580 FLOT2 ECS-1|ECS1|ESA|ESA1|M17S1 flotillin 2 protein-coding 0.013453 0.419643 -5(AGGCCCGAAACC,+,0.00) -12(CAGCGCCAGGCC,+,0.00) 33 chrX 128911358 128911527 + 0 NA Intergenic Intergenic -2450 NM_018990 54440 Hs.61469 NM_018990 HPRD:02342 SASH3 753P9|CXorf9|HACS2|SH3D6C|SLY SAM and SH3 domain containing 3 protein-coding 0.076923 0.658824 5(AGGCCCGGAAGA,+,0.00) 32(CCTCCCTCACGG,+,0.00) 26(CTGCTTCCTCCC,-,0.00) -48(CAAACAGGAAGC,+,0.00) -2(GCTGCGCA,+,0.00) -24(CGAGGCGG,+,0.00) -28(CCTGCGAGGC,+,0.00) 21 chr1 236029872 236030082 + 0 NA intron (NM_001301365, intron 1 of 52) CpG 250 NM_000081 1130 Hs.532411 NM_000081 HPRD:06060 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding 0.119048 0.772512 -80(CGGCCCGGCGGC,+,0.00) -93(GAGCTCCCGCCC,+,0.00) 47(TCCCGGCCCT,+,0.00) -84(CCCGCGGC,-,0.00) 30(CGCCCTCAGCCC,+,0.00) 82(CCAAACCG,+,0.00) -82(CGCGGCCCGGCG,-,0.00),-56(CCCGGCGCCGCG,+,0.00),-56(CCCGGCGCCGCG,-,0.00) -63(AAGGCGGCCC,-,0.00) -81(GCGGCCCGGCGG,+,0.00),-60(GCGGCCCGGCGC,+,0.00) 63 chr10 96122725 96123057 + 0 NA promoter-TSS (NM_022451) promoter-TSS (NM_022451) -208 NM_022451 64318 Hs.74899 NM_022451 HPRD:12562 NOC3L AD24|C10orf117|FAD24 nucleolar complex associated 3 homolog (S. cerevisiae) protein-coding 0.093373 0.600601 150(TCGGGCTCCTCC,+,0.00) -17(TGGACCGGTTGC,+,0.00) -97(CTCCGCCGCC,-,0.00) 54(GCGGGAAGCCGG,-,0.00),62(CCGGGCGGGAGG,-,0.00) 38(GGCGTCGG,-,0.00) -54(GGGCTCGCGCCC,-,0.00) 2(CGTGCGCG,-,0.00) -5(CCCCCGGC,-,0.00),61(GCCGGGCG,+,0.00) 17(TGGCACGA,-,0.00) 7 chr20 17512050 17512241 + 0 NA promoter-TSS (NM_001195) promoter-TSS (NM_001195) -131 NM_001195 631 Hs.129702 NM_001195 HPRD:04494 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1, filensin protein-coding 0.099476 0.625000 -85(CCCCCGGC,-,0.00) -34(CGCTGGGCCCGG,-,0.00) 1(GGCCCGCTTT,+,0.00) 227 chr5 64064264 64064453 + 0 NA promoter-TSS (NM_001297644) promoter-TSS (NM_001297644) 138 NM_173829 285672 Hs.69504 NM_173829 HPRD:08210 SREK1IP1 P18SRP|SFRS12IP1 SREK1-interacting protein 1 protein-coding 0.063492 0.600000 -86(CCTTGCGCTCCC,-,0.00) 26 chr5 177659461 177659630 + 0 NA exon (NM_153373, exon 1 of 13) exon (NM_153373, exon 1 of 13) 278 NM_153373 85007 Hs.248746 NM_153373 HPRD:18482 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding 0.147929 0.782353 -86(CCCCCCGCCCGG,+,0.00) 41(GGGCTGGGCCTC,-,0.00) 1(TCAGTCGG,-,0.00) -99(CCCCCGCC,-,0.00),-85(CCCCCGCC,-,0.00) -54(TCAGGGCCAGCG,+,0.00) -44(CGTGTCGG,+,0.00) -19(GCGGCCATGGTG,+,0.00),-17(GGCCATGGTGGG,-,0.00) 80 chr11 65657945 65658392 + 0 NA 5' UTR (NM_006848, exon 1 of 1) 5' UTR (NM_006848, exon 1 of 1) 293 NM_006848 11007 Hs.66713 NM_006848 HPRD:16101 CCDC85B DIPA coiled-coil domain containing 85B protein-coding 0.118568 0.741071 210(GGAGGCCGAG,+,0.00),331(CGCGGCCGCC,-,0.00) 192(AGAGGCCT,-,0.00) 107(CGCGTGCG,+,0.00) 257(CGGCGCTA,+,0.00) 145(GCCCGACG,-,0.00) -36(CTCAGGCCCCGC,-,0.00),40(CGCGCGCCCCGC,-,0.00),112(GCGGAGCCGGAG,+,0.00),282(GCGGCGCCTGCG,+,0.00) 164(GGCCGCGGCGGC,-,0.00),204(AGCCATGGAGGC,-,0.00),309(GCGCCTGGCGGC,-,0.00) 45(GCCCCGCCGC,-,0.00) 224(GCGGCCTGGAGG,+,0.00),328(CAGCGCGGCCGC,-,0.00) 193 chr22 40859143 40859453 + 0 NA 5' UTR (NM_001282660, exon 1 of 12) 5' UTR (NM_001282660, exon 1 of 12) 146 NM_001282660 57591 Hs.654688 NM_020831 HPRD:10445 MKL1 BSAC|MAL|MRTF-A megakaryoblastic leukemia (translocation) 1 protein-coding 0.022581 0.488746 -25(CTTACGCG,-,0.00) -19(CGGCATGA,-,0.00) 15(GTCCGGCG,-,0.00) 119 chr4 140477270 140477441 + 0 NA 5' UTR (NM_030648, exon 1 of 8) 5' UTR (NM_030648, exon 1 of 8) 222 NM_030648 80854 Hs.480792 NM_030648 HPRD:16226 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing (lysine methyltransferase) 7 protein-coding 0.087719 0.709302 17(GGAGGAGGAGGA,-,0.00),20(GGAGGAGGAGGA,-,0.00) -16(GGCGGCTGAG,+,0.00) -81(TGGCGGCT,+,0.00) 48(GGGCTGGCTCGC,-,0.00) -38(TCCCGTCCCT,+,0.00) -93(CGTCGCTA,+,0.00) -50(TGCGCGGC,-,0.00) -56(CGGGGCTGCGCG,-,0.00) -86(ATCCATGGCGGC,-,0.00) -52(GCTGCGCGGC,+,0.00) 180 chr19 12904411 12904953 + 0 NA TTS (NM_002229) TTS (NM_002229) 2372 NM_002229 3726 Hs.25292 NM_002229 HPRD:01303 JUNB AP-1 jun B proto-oncogene protein-coding 0.110701 0.758748 337(GGAGCGGGGCGA,-,0.00) 65(AGGCGGCT,+,0.00) 36(CCGGGAAGGGGG,-,0.00),59(CCGGGCAGGCGG,-,0.00) 256(CCGACGCC,+,0.00) 44(GGGGCCGGGA,-,0.00) 362(TCCTGCCG,+,0.00),380(TCGGGCCG,+,0.00) 208(CGTCTGAC,+,0.00) -88(TTTCCCCG,-,0.00),54(TTTTCCCG,-,0.00) 189(GCCGCGCC,+,0.00),423(CCCGCGCA,+,0.00) 295(GCGGCGCCCGCC,+,0.00) 29(CGCGGCGCCGGG,+,0.00),29(CGCGGCGCCGGG,-,0.00) 293(GGGCGGCGCC,+,0.00) 184(GCCCCGCCGC,-,0.00) 99 chr9 71589323 71589520 + 0 NA intron (NR_110647, intron 1 of 2) intron (NR_110647, intron 1 of 2) 1336 NR_110647 101927069 Hs.663405 NR_110647 LOC101927069 - uncharacterized LOC101927069 ncRNA 0.015228 0.419192 65(GGTGTCGA,-,0.00) 244 chr12 122750777 122751082 + 0 NA exon (NM_022916, exon 1 of 13) exon (NM_022916, exon 1 of 13) 139 NM_022916 65082 Hs.592009 NM_022916 HPRD:15651 VPS33A - vacuolar protein sorting 33 homolog A (S. cerevisiae) protein-coding 0.114754 0.663399 192(CAACCCGGAAAC,+,0.00) 68(AGCCGCCA,-,0.00) 106(CCAACCGA,+,0.00) -38(TCCCGCCCCT,+,0.00) 12(TCGCGACG,-,0.00) 55(CGTAGGAC,+,0.00),114(GTCCGCCG,-,0.00) -63(GGGAGGCGAGGG,+,0.00) 22(CCGCCTCG,-,0.00) 179 chr19 17958600 17958783 + 0 NA intron (NM_000215, intron 1 of 23) CpG 150 NM_000215 3718 Hs.515247 NM_000215 HPRD:02547 JAK3 JAK-3|JAK3_HUMAN|JAKL|L-JAK|LJAK Janus kinase 3 protein-coding 0.060109 0.679348 -28(CTGCCCCAGCCC,+,0.00) 57(CGGGCAGGGA,-,0.00) -10(CCCCCGCC,-,0.00) 21(GGGCCGAGCC,+,0.00) -86(GCCTCGCAGC,-,0.00) 162 chr16 67225433 67226403 + 0 NA promoter-TSS (NM_001950) promoter-TSS (NM_001950) -150 NM_001950 1874 Hs.108371 NM_001950 HPRD:02806 E2F4 E2F-4 E2F transcription factor 4, p107/p130-binding protein-coding 0.054639 0.589083 598(GGCGGAGGCCGG,-,0.00) 778(TGGGCCGGTAGC,+,0.00) 802(GGCGGCCCAG,+,0.00) 506(CCGGCTGCCCGG,+,0.00) 644(CGGCACGA,-,0.00) 534(CGGAAGTGGCGG,+,0.00) 28(GCTTGCTGTTTG,-,0.00) 498(CGCTGGCTCCGG,-,0.00),545(GCGGCGCCGGCC,+,0.00),621(CGCCGCCCCCGG,-,0.00) 303(TGCCAGGGCGGC,-,0.00),550(GCCGGCCTGGCC,+,0.00),590(GGCGCGATGGCG,+,0.00) 542(GCGGCGGCGC,+,0.00),617(GCGCCGCCGC,-,0.00) 551(CCGGCCTGGCCT,+,0.00),561(CTGGCCTGGCTG,+,0.00),803(GCGGCCCAGCTG,+,0.00) 72 chr19 45393404 45393961 + 0 NA promoter-TSS (NM_006114) promoter-TSS (NM_006114) -795 NM_001128917 10452 Hs.655909 NM_006114 HPRD:16274 TOMM40 C19orf1|D19S1177E|PER-EC1|PEREC1|TOM40 translocase of outer mitochondrial membrane 40 homolog (yeast) protein-coding 0.039497 0.508961 438(GGGCCCGGCTGC,+,0.00) 405(TAGGTCGG,-,0.00) 102(AGGGCCGGAA,-,0.00) 399(CGGTTTTA,-,0.00) -39(AGGAGCCCAAGG,+,0.00) 328(CGAGGAGCAGCG,+,0.00) 437(GGGGCCCGGCTG,+,0.00) 246 chr19 47615241 47616506 + 0 NA intron (NM_015168, intron 1 of 14) CpG-14022 1136 NM_015168 23211 Hs.104661 NM_015168 ENSG00000130749 ZC3H4 C19orf7 zinc finger CCCH-type containing 4 protein-coding 0.098814 0.702212 217(TCCTCCTCCTCC,+,0.00),220(TCCTCCTCCTCC,+,0.00),223(TCCTCCTCCTCC,+,0.00),226(TCCTCCTCCTCC,+,0.00),229(TCCTCCTCCTCC,+,0.00),232(TCCTCCTCCTCC,+,0.00),235(TCCTCCTCCTCC,+,0.00),279(TCCTCCTCCTCC,+,0.00),1100(GGCGGAGGCGGA,-,0.00) 1030(TGGCGGCT,+,0.00) 239(CCTCCTCCGCGG,+,0.00),302(CCGGGGACGCAG,-,0.00),771(CCCGGGGGGCGG,-,0.00),988(CCGGCTGCCCGG,+,0.00) 391(GGCGTCGG,-,0.00),419(GGCGTTGA,-,0.00),434(GGCGGCGA,-,0.00),449(GGCGGCGA,-,0.00),679(TCGCCGCC,+,0.00) 311(CAGCCCCGGCCC,+,0.00) 643(CGCGTAGG,+,0.00) 200(CCCACCGA,+,0.00) 383(GCCGGGCG,+,0.00),470(GGCGGGGG,+,0.00),1000(CCCCCGCC,-,0.00) 1038(CGGCCCGA,-,0.00) 864(GGGGAGAAGAGG,+,0.00) 964(CCTTCTCTGCCC,+,0.00) 41(GTCCGAGG,-,0.00) 613(CGGTTTCG,-,0.00) 347(GGGAGCGGGAGG,+,0.00),409(AGGAGGCGAAGG,+,0.00) 485(GGCGCGGC,-,0.00) 383(GCCGGGCGGGCG,+,0.00),429(GCGGCGGCGGCG,+,0.00),444(GCGGCGGCGGCG,+,0.00),829(CGCGGGCCGCGC,-,0.00) 941(CGCGGAGACGGG,+,0.00) 206(GACCCCGCCC,-,0.00),1034(GGCTCGGCCC,-,0.00) 550(CGTGGCGG,+,0.00),642(CCGCGTAG,-,0.00) -3(CCCCACGGCGCC,-,0.00),258(CAACATGGCGGC,-,0.00),437(GGCGATGGCGGC,-,0.00),547(GGGCGTGGCGGG,-,0.00) -16(TCTCCGCAGC,-,0.00),692(TCTCCGCAGC,-,0.00) -35(CAGCCAGGACCC,-,0.00),247(GCGGCCCGGCCC,+,0.00) 240 chr13 30424560 30424857 + 0 NA 5' UTR (NM_007106, exon 1 of 5) 5' UTR (NM_007106, exon 1 of 5) 112 NM_007106 5412 Hs.145575 NM_007106 HPRD:05275 UBL3 HCG-1|PNSC1 ubiquitin-like 3 protein-coding 0.097643 0.674497 -17(TCCTCCTCCTCC,+,0.00) 17(CGCGGCCGCC,-,0.00) -80(CGGAAGAGGCCG,+,0.00) 61(GCGGCGGCGGCG,+,0.00),64(GCGGCGGCGGCG,+,0.00) 48(CAACATGGCGGC,-,0.00) 120(CCCTCGCAGC,-,0.00) 74 chr19 36204014 36204224 + 0 NA intron (NM_014383, intron 1 of 5) intron (NM_014383, intron 1 of 5) 289 NM_014383 27033 Hs.99430 NM_014383 HPRD:12055 ZBTB32 FAXF|FAZF|Rog|TZFP|ZNF538 zinc finger and BTB domain containing 32 protein-coding 0.009524 0.530806 0(GAGACAGGAGGC,+,0.00) 182 chr2 208031193 208031566 + 0 NA promoter-TSS (NM_003709) promoter-TSS (NM_003709) 201 NM_001270942 8609 Hs.59908 NM_003709 HPRD:07279 KLF7 UKLF Kruppel-like factor 7 (ubiquitous) protein-coding 0.112601 0.735294 121(CCCGCCTCCGCC,+,0.00) -63(CGCGTCCG,+,0.00) 2(ACGGTCGG,-,0.00) 69(GCCGCGGG,+,0.00) 235(GGGCTGCCAGGG,-,0.00) 54(GGCGCGGC,-,0.00) -58(CCGGAGCCCGCG,+,0.00),160(GCGGTGCCGGGG,+,0.00) -25(CGCGTCGCCGCG,+,0.00),-25(CGCGTCGCCGCG,-,0.00) 156(CGAGGCGG,+,0.00) -24(GCGTCGCCGC,-,0.00),72(GCGGGGAAGC,+,0.00) 61 chr2 198569561 198569869 + 0 NA promoter-TSS (NM_138395) promoter-TSS (NM_138395) -313 NM_138395 92935 Hs.744330 NM_138395 HPRD:14363 MARS2 MetRS|mtMetRS methionyl-tRNA synthetase 2, mitochondrial protein-coding 0.019481 0.404531 68(AAACGGCT,+,0.00) 230 chr17 76164089 76164823 + 0 NA promoter-TSS (NM_004710) promoter-TSS (NM_004710) -215 NM_004710 9144 Hs.464210 NM_004710 HPRD:04891 SYNGR2 - synaptogyrin 2 protein-coding 0.088556 0.708844 272(TGGCCCGGAGAC,+,0.00) 367(CTCGCCCGCC,-,0.00) 220(CCGTCTTCCCGG,+,0.00),612(CCGGGGAGGGCG,-,0.00),613(CGGGGAGGGCGG,-,0.00) 492(GGCGGCGA,-,0.00) 443(TCGGGCGG,-,0.00) 360(CCCGCGGC,-,0.00),427(CCCCCGGC,-,0.00) 409(TAGCGGCG,-,0.00) 189(GGGCAAAGAGGG,-,0.00) 525(GGCGCGGC,-,0.00) 481(GCGGCGGCAGCG,+,0.00),493(GCGGCGACGGCG,+,0.00),514(GCGGGGCCTACG,+,0.00),621(GCGGGCCGAGGG,+,0.00) 265(GCCGGCGTGGCC,+,0.00),528(GCGGCCAAGGCG,+,0.00),530(GGCCAAGGCGGG,-,0.00) 319(GCTCCGCGGC,-,0.00) 108 chr12 76477984 76478402 + 0 NA intron (NM_139207, intron 1 of 15) CpG 545 NM_139207 4673 Hs.524599 NM_004537 HPRD:01248 NAP1L1 NAP1|NAP1L|NRP nucleosome assembly protein 1-like 1 protein-coding 0.107656 0.727924 73(CCCTCTCAGGCT,+,0.00) 109(GTCCGACC,-,0.00) 11(GCCGCGCC,+,0.00),208(GCCGCCCA,+,0.00),293(GCTGCGCA,+,0.00) 141(GGGCGGCCAGCG,+,0.00) -87(GCGGCGCAGC,+,0.00),-87(GCGGCGCAGC,-,0.00) -50(GCGGCCTCGCTC,+,0.00),4(CCTCCAGGCCGC,-,0.00),277(GAGCCAGGCGGC,-,0.00) 115 chr22 20104807 20105019 + 0 NA promoter-TSS (NM_001257994) promoter-TSS (NM_001257994) -34 NM_001278640 5902 Hs.24763 NM_002882 HPRD:03110 RANBP1 HTF9A RAN binding protein 1 protein-coding 0.146226 0.708920 -21(CGGGCCGGGC,-,0.00) -7(GCCGCGGG,+,0.00) 71(TGGTTTTG,-,0.00) -44(TGCGCGCT,-,0.00) 17(GCGGGGCGGGCC,+,0.00) 92 chr6 44214877 44215435 + 0 NA intron (NM_001271972, intron 1 of 11) CpG 461 NM_007355 3326 Hs.509736 NM_007355 HPRD:06763 HSP90AB1 D6S182|HSP84|HSP90B|HSPC2|HSPCB heat shock protein 90kDa alpha (cytosolic), class B member 1 protein-coding 0.060932 0.567084 165(TCGGCGCC,+,0.00),294(GGCGTCGG,-,0.00) 279(CGGACGCG,-,0.00),383(CGGACGCG,-,0.00) 318(GGCGGGGG,+,0.00) 182(TAGCGAGG,-,0.00) 296(CGTCGGAG,+,0.00) 127(CGGTTTTC,-,0.00) 211(TGGGCGGC,-,0.00) 240(GCGCGGCCCGGG,+,0.00) 283(CGCGGCTACGGG,-,0.00) 103 chr15 52311279 52311561 + 0 NA promoter-TSS (NM_002748) promoter-TSS (NM_002748) 9 NM_002748 5597 Hs.411847 NM_002748 HPRD:04213 MAPK6 ERK3|HsT17250|PRKM6|p97MAPK mitogen-activated protein kinase 6 protein-coding 0.134752 0.731449 69(GGCGGCGA,-,0.00) -59(CGCGTGCG,+,0.00) -37(GGCGGGGG,+,0.00) 70(GCGGCGACTGCG,+,0.00),154(CGCGAGCCCCGC,-,0.00) 9(CGTGGCACCGCG,-,0.00),17(CGCGAAGCCCCG,+,0.00) 22(AGCCCCGCCC,-,0.00) 16(CCGCGAAG,-,0.00) -43(GGGCAGGGCGGG,-,0.00) 79(GCGGCAAAGC,+,0.00) 201 chr13 113862874 113863067 + 0 NA promoter-TSS (NM_018386) promoter-TSS (NM_018386) -8 NM_001258213 55795 Hs.508769 NM_018386 HPRD:07749 PCID2 F10 PCI domain containing 2 protein-coding 0.124352 0.737113 -8(GAGCGCCACCCC,+,0.00) 43(TCGGTCCG,-,0.00) 34(TTCCGGCCCT,+,0.00) 65(CCCCCGGC,-,0.00),76(GCCGCGGG,+,0.00) 66(CCCCGGCCCCGC,-,0.00) 71(GCCCCGCCGC,-,0.00) -100(CAACCACGCCGC,-,0.00) 232 chr19 41859967 41860181 + 0 NA promoter-TSS (NM_000660) promoter-TSS (NM_000660) -236 NM_000660 7040 Hs.645227 NM_000660 TGFB1 CED|DPD1|LAP|TGFB|TGFbeta transforming growth factor, beta 1 protein-coding 0.065421 0.683721 -23(GGCGGCCAAG,+,0.00) -59(CCCCGGCTCCGC,-,0.00) -58(CCCGGCTCCGCC,-,0.00) -55(GGCTCCGCCC,-,0.00) -22(GCGGCCAAGC,+,0.00) 10 chr12 9822438 9822753 + 0 NA intron (NM_001197319, intron 1 of 2) intron (NM_001197319, intron 1 of 2) 291 NR_036693 29121 Hs.268326 NM_013269 CLEC2D CLAX|LLT1|OCIL C-type lectin domain family 2, member D protein-coding 0.000000 0.332278 113 chr19 50180452 50180724 + 0 NA intron (NM_001207042, intron 1 of 7) CpG 179 NM_198318 3276 Hs.20521 NM_001536 HPRD:04257 PRMT1 ANM1|HCP1|HRMT1L2|IR1B4 protein arginine methyltransferase 1 protein-coding 0.091912 0.670330 -11(GGCAGCCGAG,+,0.00) 50(AGGCGGCT,+,0.00) 59(TGGGTCGG,-,0.00) 125(CCCCCGCC,-,0.00) 53(CGGCTTTG,-,0.00) -25(CGGGTGAA,+,0.00) -51(CTTGGCGG,+,0.00) -54(GGTCTTGGCGGC,-,0.00),35(GCCGCCGTGGGC,+,0.00) 152 chr1 38157761 38158106 + 0 NA promoter-TSS (NM_018101) promoter-TSS (NM_018101) -140 NM_018101 55143 Hs.524571 NM_018101 HPRD:13017 CDCA8 BOR|BOREALIN|DasraB|MESRGP cell division cycle associated 8 protein-coding 0.063768 0.656069 -37(AGCCGCCA,-,0.00),43(AGCCGCCA,-,0.00) 122(AGGGCGGGGA,-,0.00) 231(CGGCAGGA,-,0.00) 126(CGGGGAAA,+,0.00) 97(GGCGGAGCCGGG,+,0.00) 96(GGGCGGAGCC,+,0.00) 163(CCGCGACG,-,0.00) -87(GGTCACGGCGGC,-,0.00),91(GGCCAGGGCGGA,-,0.00) -57(CAGCCAGGCCAG,-,0.00),174(GCGGCCTCGCTG,+,0.00) 189 chr17 38210710 38210932 + 0 NA promoter-TSS (NM_001079518) promoter-TSS (NM_001079518) 68 NR_052017 9862 Hs.462983 NM_014815 HPRD:06107 MED24 ARC100|CRSP100|CRSP4|DRIP100|THRAP4|TRAP100 mediator complex subunit 24 protein-coding 0.076577 0.573991 84(AGGCCGCT,+,0.00) 100(GGCGTCGC,-,0.00) -5(CTAGTCGG,+,0.00) 225 chr19 11071062 11071367 + 0 NA promoter-TSS (NM_001128849) promoter-TSS (NM_001128849) -384 NM_003072 6597 Hs.327527 NM_003072 HPRD:04459 SMARCA4 BAF190|BAF190A|BRG1|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding 0.085246 0.647059 182(CGCGGCCGCC,-,0.00) 16(AAGCGGTT,+,0.00) -7(TCGCCGCC,+,0.00) -42(ACGGTCGG,-,0.00) 81(GTCCTACG,-,0.00) 60(CGGTCTTG,-,0.00) 95(GGTTCCTATTTC,-,0.00) -39(GTCGGGCCCCGC,-,0.00) -10(GCCTCGCCGC,-,0.00) 207 chr12 132413755 132413934 + 0 NA promoter-TSS (NM_025215) promoter-TSS (NM_025215) 31 NM_025215 80324 Hs.592004 NM_025215 HPRD:10481 PUS1 MLASA1 pseudouridylate synthase 1 protein-coding 0.134078 0.727778 -99(CTCGGCCGCC,-,0.00) 32(TCGACTCC,+,0.00) -83(TCGGTCGT,-,0.00) -27(CGTCGCGA,+,0.00) 57(GCGGGGCGGGAG,+,0.00) -30(CCGCGTCG,-,0.00),9(CGACGCGG,+,0.00) 142 chr2 111878674 111879094 + 0 NA intron (NM_207002, intron 1 of 3) CpG-15379 393 NM_001204111 10018 Hs.469658 NM_006538 HPRD:04828 BCL2L11 BAM|BIM|BOD BCL2-like 11 (apoptosis facilitator) protein-coding 0.114286 0.665083 96(AGACGCTT,-,0.00) 273(CCGGGCAGGAGG,-,0.00) -78(TCGGCGCC,+,0.00),107(TCGGCGCC,+,0.00),303(TCGGCGCC,+,0.00) 304(CGGCGCCGGCCC,+,0.00) 55(CGGCACCA,-,0.00) 307(CGCCGGCCCGGG,-,0.00) -83(CCGCCTCG,-,0.00) 91 chr14 102553139 102553330 + 0 NA intron (NM_001017963, intron 2 of 11) CpG 278 NM_005348 3320 Hs.525600 NM_005348 HPRD:00777 HSP90AA1 EL52|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90kDa alpha (cytosolic), class A member 1 protein-coding 0.099476 0.734375 -50(CGCGGCCGCC,-,0.00) -41(CCGGGAGCGCGG,-,0.00) 16(CCGCGCCAGCCG,+,0.00) -36(AGCGCGGCCC,-,0.00) -31(GGCCCTGGCTGC,-,0.00) 167 chr4 89744834 89745205 + 0 NA promoter-TSS (NM_001265580) promoter-TSS (NM_001265580) -507 NM_001265578 10144 Hs.97270 NM_014883 HPRD:10944 FAM13A ARHGAP48|FAM13A1 family with sequence similarity 13, member A protein-coding 0.013477 0.392473 0(TAGTCGCT,+,0.00),60(AAGTCTCT,+,0.00) 48 chr19 924745 925966 + 0 NA promoter-TSS (NM_005224) promoter-TSS (NM_005224) -682 NM_005224 1820 Hs.501296 NM_005224 ARID3A BRIGHT|DRIL1|DRIL3|E2FBP1 AT rich interactive domain 3A (BRIGHT-like) protein-coding 0.087633 0.691489 985(GGAGGGGGGCGA,-,0.00) 410(GGCTCCGGGTCC,-,0.00) 346(GGCAGCCGAG,+,0.00) 679(AGAGACTT,-,0.00) 843(CCGGGGGCGGGG,-,0.00),948(CAGCGCCCCCGG,+,0.00),982(GCGGGAGGGGGG,-,0.00) 512(CCGACGCC,+,0.00) 771(CCGCCCCAGCCC,+,0.00),777(CAGCCCCTGCCC,+,0.00) 148(CCGACCGC,+,0.00) -70(AGGGGAGGGA,-,0.00),376(CGGGCCGGGC,-,0.00) 786(CCCCCGGC,-,0.00),842(GCCGGGGG,+,0.00),858(CCCGCGGC,-,0.00) 748(CCTCTTCTTCCC,-,0.00) 833(CGTCCCTA,+,0.00) 510(CTCCGACG,-,0.00),973(CGTCAGAC,+,0.00) 1006(CGGGGAAA,+,0.00) 109(CCCGCGCA,+,0.00),194(TGCGCAGT,-,0.00),423(AGCGCGCA,+,0.00) 781(CCCTGCCCCCGG,-,0.00) -51(AACCCCGCCC,-,0.00),514(GACGCCGCCC,-,0.00),808(GGGCCGCGTC,+,0.00) 811(CCGCGTCG,-,0.00) 942(GCTCCCCAGC,-,0.00) 372(CAGCCGGGCCGG,-,0.00),713(CGGCCAGCCCGC,-,0.00),1042(CGCCCGGGCCGC,-,0.00) 107 chr21 26934042 26934308 + 0 NA promoter-TSS (NR_001458) promoter-TSS (NR_001458) -282 NR_001458 114614 Hs.697120 NR_001458 ENSG00000234883 MIR155HG BIC|MIRHG2|NCRNA00172 MIR155 host gene (non-protein coding) ncRNA 0.063910 0.524345 -54(CCGACTGA,+,0.00) 32(GGCGCGGT,-,0.00) 87 chr8 145149847 145150195 + 0 NA promoter-TSS (NM_001916) promoter-TSS (NM_001916) 83 NM_001916 1537 Hs.289271 NM_001916 HPRD:00480 CYC1 MC3DN6|UQCR4 cytochrome c-1 protein-coding 0.158046 0.787966 41(GGAGGAGGCCAA,-,0.00),202(CCGGCCTCCGCG,+,0.00) 30(GGCGGCCGCG,+,0.00) -31(CCGCGCTCCCCG,+,0.00),120(GCGCGTGCCCGG,+,0.00) 2(TCGTGGCG,+,0.00) 17(GGCCGACG,-,0.00) -10(AGGTTTTG,-,0.00) -94(CCGGGACCAGCG,+,0.00),-44(GCCCGGCCCCGC,-,0.00),98(GCGGGGCGCGGG,+,0.00) 212(CGCGGCCCCGCA,-,0.00) -45(AGCCCGGCCC,-,0.00) 75(CTTCGCGG,+,0.00) 174 chr6 27113485 27114612 + 0 NA promoter-TSS (NM_080596) promoter-TSS (NM_080596) 589 NM_080593 85236 Hs.437275 NM_080593 HPRD:13658 HIST1H2BK H2B/S|H2BFAiii|H2BFT|H2BK histone cluster 1, H2bk protein-coding 0.055013 0.507092 409(ATGTGGCT,+,0.00),554(AAGTGGCT,+,0.00),591(AGACGCTT,-,0.00) 906(TCTTGCCG,+,0.00) 76(GGGGTGAGGGGG,-,0.00) 648(CCTCGGAC,+,0.00) 319(GAGCCAGGAAGC,+,0.00) 77 chr10 25013225 25013692 + 0 NA promoter-TSS (NM_020824) promoter-TSS (NM_020824) -861 NM_020824 57584 Hs.524195 NM_020824 HPRD:06445 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding 0.068522 0.598291 166(AGGCGGCT,+,0.00) 250(TCCCGGGCCT,+,0.00) 221(CGGCACAA,-,0.00) 0(CGTGGGAC,+,0.00) 224(CACAACCG,+,0.00) 142(GGCGCGGC,-,0.00) 143(GCGCGGCTAGCG,+,0.00) 211(TCCGGAGCCGCG,+,0.00) 209(GCTCCGGAGC,+,0.00),209(GCTCCGGAGC,-,0.00) 214 chr2 241505128 241505439 + 0 NA Intergenic Intergenic -2721 NM_018226 57140 Hs.5345 NM_018226 RNPEPL1 - arginyl aminopeptidase (aminopeptidase B)-like 1 protein-coding 0.045016 0.634615 179(CCCGCGGC,-,0.00) -42(CGGCACCA,-,0.00) 181(CGCGGCTCAGCC,-,0.00) -21(ACCGCGGCCC,-,0.00) 133 chr6 161695076 161695285 + 0 NA promoter-TSS (NM_020133) promoter-TSS (NM_020133) -73 NM_020133 56895 Hs.353175 NM_020133 HPRD:12437 AGPAT4 1-AGPAT4|LPAAT-delta|dJ473J16.2 1-acylglycerol-3-phosphate O-acyltransferase 4 protein-coding 0.019139 0.476190 149 chr11 118215155 118215387 + 0 NA intron (NM_000073, intron 1 of 6) intron (NM_000073, intron 1 of 6) 212 NM_000073 917 Hs.2259 NM_000073 CD3G CD3-GAMMA|IMD17|T3G CD3g molecule, gamma (CD3-TCR complex) protein-coding 0.000000 0.506438 123 chr4 146402705 146402877 + 0 NA promoter-TSS (NM_005900) promoter-TSS (NM_005900) -160 NM_005900 4086 Hs.604588 NM_005900 HPRD:03356 SMAD1 BSP-1|BSP1|JV4-1|JV41|MADH1|MADR1 SMAD family member 1 protein-coding 0.127907 0.710983 34(CGGGCCGGGA,-,0.00) -64(AGGAAGAAACGG,+,0.00) 1(CTCCGGCCCCGG,-,0.00),7(CCCCGGCCGCGC,-,0.00) -15(GCTCCCCCGC,-,0.00) 30(CGGCCGGGCCGG,-,0.00) 221 chr17 80186257 80186443 + 0 NA promoter-TSS (NM_001042422) promoter-TSS (NM_001042422) 68 NM_001206950 9123 Hs.500761 NM_004207 HPRD:04854 SLC16A3 MCT 3|MCT 4|MCT-3|MCT-4|MCT3|MCT4 solute carrier family 16 (monocarboxylate transporter), member 3 protein-coding 0.096774 0.727273 -81(AGCCACCT,-,0.00) -18(GCCGCGGG,+,0.00) 62(GGTCGGAC,+,0.00),63(GTCGGACG,-,0.00) -23(CGCAGGCCGCGG,-,0.00) -86(CGCGGAGCCACC,+,0.00) -13(GGGCCGCTCC,+,0.00) -34(CATCCAGGCAGC,-,0.00) 50 chr11 60609505 60609676 + 0 NA 5' UTR (NM_024098, exon 1 of 4) 5' UTR (NM_024098, exon 1 of 4) 161 NM_024098 79080 Hs.4253 NM_024098 HPRD:08322 CCDC86 - coiled-coil domain containing 86 protein-coding 0.111111 0.656977 -99(CGGACGCG,-,0.00) -57(GGCGGGGG,+,0.00) -64(CGGTTTCG,-,0.00) 20(GCTGGGAGGC,+,0.00) 39 chr7 107300172 107300739 + 0 NA promoter-TSS (NM_000441) promoter-TSS (NM_000441) -625 NM_000441 5172 Hs.571246 NM_000441 HPRD:05735 SLC26A4 DFNB4|EVA|PDS|TDH2B solute carrier family 26 (anion exchanger), member 4 protein-coding 0.008818 0.424296 210 chr20 55967914 55968342 + 0 NA intron (NM_183425, intron 2 of 2) intron (NM_183425, intron 2 of 2) 1674 NM_001291780 55544 Hs.236361 NM_017495 HPRD:15268 RBM38 HSRNASEB|RNPC1|SEB4B|SEB4D|dJ800J21.2 RNA binding motif protein 38 protein-coding 0.032710 0.631702 199(AAGCGGAT,+,0.00) 15(GGCGGGGG,+,0.00) 277(TCGTGCAG,+,0.00) 21(GGGCAGGGAGGG,-,0.00),181(GGCCTGGGAGGG,-,0.00) 77(GGCCATGGGGCC,-,0.00) 64 chr10 103911908 103912118 + 0 NA promoter-TSS (NM_001284389) promoter-TSS (NM_001284389) 80 NM_001284389 9221 Hs.523238 NM_004741 ENSG00000166197 NOLC1 NOPP130|NOPP140|NS5ATP13|P130 nucleolar and coiled-body phosphoprotein 1 protein-coding 0.080952 0.625592 -34(GGGACCGGAAAG,+,0.00) -37(CGTGGGAC,+,0.00) -67(GGCTCCGCCC,-,0.00) 97 chr1 36022910 36023190 + 0 NA promoter-TSS (NM_024874) promoter-TSS (NM_024874) -13 NM_024874 79932 Hs.456507 NM_024874 HPRD:11164 KIAA0319L - KIAA0319-like protein-coding 0.078571 0.686833 -102(GGAGGAGGAGGA,-,0.00),102(GGAGGAGGGGCA,-,0.00) 19(CGACCCGGAAAC,+,0.00) 4(CCACCTCCCCGG,+,0.00) 167(TCGCCGCC,+,0.00) 55(TCCCGCCCCT,+,0.00) -27(CAGCGACG,-,0.00) 122(CGGGTAAA,+,0.00) 12 chr21 47878088 47878717 + 0 NA promoter-TSS (NM_206891) promoter-TSS (NM_206891) -460 NM_206890 23181 Hs.189585 NM_015151 HPRD:07611 DIP2A C21orf106|DIP2 DIP2 disco-interacting protein 2 homolog A (Drosophila) protein-coding 0.101749 0.687302 476(AGCGGCAT,-,0.00) 25(CCGTCCTCCCGC,+,0.00) 161(TCGACGCC,+,0.00),479(GGCATCGA,-,0.00),483(TCGACGCG,+,0.00) 185(CGTTCGCG,-,0.00),227(CGCGGACG,+,0.00),229(CGGACGCG,-,0.00) 143(AGGCACGA,-,0.00),366(TCGGGCCG,+,0.00) -7(CCCTCTCAGTCT,+,0.00) -62(CGTCAGAC,+,0.00),56(GTCCGACA,-,0.00) 136(CAGGTAAA,+,0.00) 176(ACTGCGCA,+,0.00),178(TGCGCAGC,-,0.00) -91(CTCAGGCCCCGC,-,0.00),-18(CGCCGGCGGCGC,-,0.00),297(GCGGGGCCACCA,+,0.00),414(GCAGGCCCAGCG,+,0.00) 271(GGGCGGGGCT,+,0.00) 233(CGCGCCATGGCG,+,0.00),235(CGCCATGGCGCG,-,0.00) 9(CCGCCAGGCCCC,-,0.00),382(CAGCCTGCCCGC,-,0.00) 41 chr18 3450558 3450988 + 0 NA promoter-TSS (NM_173210) promoter-TSS (NM_173210) 603 NM_003244 7050 Hs.373550 NM_003244 HPRD:04023 TGIF1 HPE4|TGIF TGFB-induced factor homeobox 1 protein-coding 0.102326 0.672854 -36(GGCGGCCGTG,+,0.00),247(GGCGGCCGGG,+,0.00) 257(GCCGCGGG,+,0.00),304(CCCCCGCC,-,0.00),310(CCCCCGCC,-,0.00),316(CCCCCGCC,-,0.00) 272(CGGCTTTG,-,0.00) 228(TTTTCCCG,-,0.00) -95(GCCGCGCC,+,0.00) 305(CCCCGCCCCCGC,-,0.00),311(CCCCGCCCCCGC,-,0.00) -97(GGGCCGCGCC,+,0.00) 201(CCGAGTAG,-,0.00) 52 chr8 109260613 109261028 + 0 NA intron (NM_001568, intron 1 of 12) CpG 139 NM_001568 3646 Hs.405590 NM_001568 HPRD:03734 EIF3E EIF3-P48|EIF3S6|INT6|eIF3-p46 eukaryotic translation initiation factor 3, subunit E protein-coding 0.062651 0.526442 -77(CCTCCCTCCTCC,+,0.00) -102(AGAGACTT,-,0.00) -30(CGACGCTA,+,0.00),261(TAGCGCCG,-,0.00) 292(ACTGCGCA,+,0.00) 24(CCGCCTCG,-,0.00) 173 chr3 50275153 50275452 + 0 NA intron (NM_001282618, intron 1 of 7) intron (NM_001282618, intron 1 of 7) 1713 NM_001282618 2771 Hs.77269 NM_002070 HPRD:00764 GNAI2 GIP|GNAI2B|H_LUCA15.1|H_LUCA16.1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 protein-coding 0.033445 0.580000 147(GCCTCCGGGGCA,-,0.00) 183(ATCCGCTT,-,0.00) 144(CCGGCCTCCGGG,+,0.00) 72(TCGTGCTG,+,0.00) 187(GCTTCGCTGC,-,0.00) 56 chr6 34203505 34204315 + 0 NA promoter-TSS (NM_002131) promoter-TSS (NM_002131) -667 NM_145903 3159 Hs.518805 NM_002131 HPRD:02829 HMGA1 HMG-R|HMGA1A|HMGIY high mobility group AT-hook 1 protein-coding 0.067901 0.616523 78(TCCGCCTGCGCC,+,0.00) -86(CCGGGGAGGAAG,-,0.00),103(CCGCCCTCCCCG,+,0.00) 139(TCGCTCGG,-,0.00) 166(GCCGGGCG,+,0.00),173(GCCGGGCG,+,0.00) -80(AGGAAGAAGGGG,+,0.00) 124(CCTTTGGCTTCC,-,0.00) 104(CGCCCTCCCCGC,-,0.00),635(CCCTGGGCCCGC,-,0.00) 72(CGCCGCTCCGCC,-,0.00) 10(CCGCCTCG,-,0.00),41(CCGAGAAG,-,0.00),188(CGTGGCGG,+,0.00) 229 chr1 36852000 36852340 + 0 NA promoter-TSS (NM_032017) promoter-TSS (NM_032017) -642 NM_001282546 83931 Hs.471768 NM_032017 HPRD:11359 STK40 SHIK|SgK495 serine/threonine kinase 40 protein-coding 0.017647 0.539589 68(TCCTCCTCCTCC,+,0.00) 14(AGCGACTA,-,0.00) 13(TAGCGACT,-,0.00) 45 chr12 6579404 6579611 + 0 NA intron (NM_001297438, intron 1 of 4) intron (NM_001297438, intron 1 of 4) 558 NM_014231 6843 Hs.20021 NM_014231 HPRD:01716 VAMP1 SPAX1|SYB1|VAMP-1 vesicle-associated membrane protein 1 (synaptobrevin 1) protein-coding 0.067633 0.668269 50(CGGTCCGGAAGC,+,0.00) -90(CAAAACCA,+,0.00) -26(CCCCTGCCCCGC,-,0.00),23(TGCTGGCCCCCC,-,0.00) 66 chr3 170587669 170588278 + 0 NA promoter-TSS (NM_001099645) promoter-TSS (NM_001099645) 72 NM_001099645 200916 Hs.380933 NM_001099645 ENSG00000163584 RPL22L1 - ribosomal protein L22-like 1 protein-coding 0.077176 0.570492 -48(AATTCCGGGCCC,-,0.00) 436(AGCCGATT,-,0.00),469(TAGTGGCT,+,0.00) 492(CGCACGCG,-,0.00) 263(GCGCTGAGAGCG,-,0.00) -69(CAAAACCA,+,0.00) 190(CGAGTCGG,+,0.00) 19 chr12 10456731 10457015 + 0 NA promoter-TSS (NM_001114396) promoter-TSS (NM_001114396) -177 NM_001114396 3824 Hs.562457 NM_002262 HPRD:04204 KLRD1 CD94 killer cell lectin-like receptor subfamily D, member 1 protein-coding 0.003521 0.414035 -72(CAAAACAG,+,0.00) 54 chr19 45582415 45582647 + 0 NA promoter-TSS (NM_024707) promoter-TSS (NM_024707) 1 NM_024707 79760 Hs.466919 NM_024707 HPRD:07600 GEMIN7 SIP3 gem (nuclear organelle) associated protein 7 protein-coding 0.112069 0.738197 -46(CGGCCTGCCCGG,+,0.00),56(CCCTCTCCCCGG,+,0.00) -40(GCCCGGGCCT,+,0.00) -79(GCGGCGCGGGCG,+,0.00),-64(CCCAGGCTCCGC,-,0.00),-22(GGGGCGCCGGCG,+,0.00) -63(CCAGGCTCCGCG,-,0.00) -82(GCGGCGGCGC,+,0.00),-59(GCTCCGCGGC,-,0.00) -47(GCGGCCTGCCCG,+,0.00) 237 chr7 98476335 98476600 + 0 NA intron (NM_001244580, intron 1 of 71) CpG 354 NM_003496 8295 Hs.203952 NM_003496 HPRD:04310 TRRAP PAF350/400|PAF400|STAF40|TR-AP|Tra1 transformation/transcription domain-associated protein protein-coding 0.132075 0.748120 -62(CGCCCCGGGATC,+,0.00) -1(TGCGGCCGAG,+,0.00) 104(CCGGGACGGCGA,-,0.00) 6(GAGCTGAGAGGA,-,0.00),145(GAGCTGAGAGGT,-,0.00) 124(GGGAACCGGAGG,+,0.00) -100(CGGCGGCTCCGC,-,0.00) -99(GGCGGCTCCGCG,-,0.00) -21(GCTGCGGGGC,+,0.00) 0(GCGGCCGAGCTG,+,0.00) 70 chr1 28832526 28832695 + 0 NA intron (NM_001048199, intron 1 of 11) intron (NM_001048199, intron 1 of 11) 155 NR_036473 8420 Hs.469723 NR_002909 ENSG00000242125 SNHG3 NCRNA00014|RNU17C|RNU17D|U17HG|U17HG-A|U17HG-AB small nucleolar RNA host gene 3 (non-protein coding) ncRNA 0.035503 0.458824 188 chr12 57881472 57881913 + 0 NA promoter-TSS (NM_004990) promoter-TSS (NM_004990) -44 NM_004990 4141 Hs.632707 NM_004990 HPRD:08864 MARS METRS|MRS|MTRNS|SPG70 methionyl-tRNA synthetase protein-coding 0.063492 0.552036 237(AGGCCGCT,+,0.00) 255(GCGGGAGGCCGG,-,0.00) 6(CAAGACCG,+,0.00) 182(GCGGTGCCAGGG,+,0.00) 68 chr14 20811296 20811762 + 0 NA promoter-TSS (NM_005484) promoter-TSS (NM_005484) 41 NR_002312 85495 Hs.613102 NR_002312 ENSG00000259001 RPPH1 H1RNA|RPPH1-1 ribonuclease P RNA component H1 ncRNA 0.057940 0.601713 256(AGCGACAT,-,0.00) 319(CGCACGCG,-,0.00) 255(TAGCGACA,-,0.00) 293(CCCTCACAGCCA,+,0.00) 350(CACTGGGCCCGC,-,0.00) 11(CGCGGAGCCCCG,+,0.00) -28(GGGCGGGGTC,+,0.00) 339(CCGCCTAG,-,0.00) -48(CCGCCGGGCCCC,-,0.00),310(CTGCCAGGGCGC,-,0.00) 166 chr7 158622531 158622810 + 0 NA promoter-TSS (NM_020728) promoter-TSS (NM_020728) -351 NM_020728 57488 Hs.490795 NM_020728 HPRD:13053 ESYT2 CHR2SYT|E-Syt2|FAM62B extended synaptotagmin-like protein 2 protein-coding 0.136201 0.728571 -73(AGGCGGCT,+,0.00) 50(CCGGGGTGGCGG,-,0.00) -87(GGCGTCGC,-,0.00) 141(TCGGACGG,-,0.00) -40(AGGCCCGGGA,-,0.00) 63(GGGATGAGAGGG,-,0.00),113(CGGGTGAGAGGG,-,0.00) 139(GGTCGGAC,+,0.00),140(GTCGGACG,-,0.00) -99(CGGTTTTG,-,0.00) 30(TGCGCGGC,-,0.00) -102(GGGCGGTTTT,+,0.00),72(GGGCGGCGTC,+,0.00),123(GGCGCCGCCC,-,0.00) -75(CGAGGCGG,+,0.00) 1 chr2 69872111 69872303 + 0 NA Intergenic Intergenic -1230 NM_014911 22848 Hs.468878 NM_014911 AAK1 - AP2 associated kinase 1 protein-coding 0.010417 0.378238 136 chr1 228270334 228270780 + 0 NA promoter-TSS (NM_001024228) promoter-TSS (NM_001024228) 196 NM_001024226 375 Hs.286221 NM_001658 HPRD:00054 ARF1 - ADP-ribosylation factor 1 protein-coding 0.134529 0.762864 -25(AGCCGCCA,-,0.00),273(AAGTCGCT,+,0.00) 132(TCGACCCC,+,0.00),149(GGCGGCGA,-,0.00) 196(AGGCTGGGGCCC,-,0.00) 158(AGGGCCGGGC,-,0.00),184(CGGGCCGGGC,-,0.00) 80(GGCGGGGG,+,0.00),138(CCCGCGGC,-,0.00),166(GCCGGGGG,+,0.00),313(CCCCCGCC,-,0.00) -6(CAAAACCA,+,0.00) -74(CTTACCCG,-,0.00) 141(GCGGCGGCGGCG,+,0.00),144(GCGGCGGCGGCG,+,0.00),150(GCGGCGACAGGG,+,0.00),161(GCCGGGCCGGGG,+,0.00),308(CCCTGCCCCCGC,-,0.00) -100(GGGCGGAGTT,+,0.00),185(GGGCCGGGCT,+,0.00) 201(GGGGCCCGGCCG,+,0.00) 88 chr7 25164629 25164798 + 0 NA intron (NM_018947, intron 1 of 2) CpG 267 NM_018947 54205 Hs.437060 NM_018947 CYCS CYC|HCS|THC4 cytochrome c, somatic protein-coding 0.094675 0.682353 -86(AAGCCGTT,+,0.00) -67(TCGGTCTG,-,0.00),15(TCGGTCGC,-,0.00) -38(TCCCCGCCCT,+,0.00) -101(GCTCCGCCGC,-,0.00) 116 chr22 41681797 41682532 + 0 NA promoter-TSS (NM_002883) promoter-TSS (NM_002883) 91 NM_002883 5905 Hs.183800 NM_002883 HPRD:03839 RANGAP1 Fug1|RANGAP|SD Ran GTPase activating protein 1 protein-coding 0.102041 0.675272 23(ACGCCCTCCTCG,+,0.00),303(GGAGGAGGAGGA,-,0.00),495(CCGCCCTCCTCT,+,0.00) -40(CTCGGCCGTC,-,0.00) -36(GCCGTCGA,-,0.00),355(TCGAGGCC,+,0.00) 62(CGGGGAAA,+,0.00),400(CGGGTAGA,+,0.00) 100(GCGGCGCCGCCG,+,0.00),375(CCCTCGCCCCGC,-,0.00) 130(CGCGCCTCCGCC,-,0.00) 17(GGCGCCACGCCC,+,0.00) 103(GCGCCGCCGC,-,0.00) 144 chr15 75495039 75495299 + 0 NA intron (NM_015492, intron 1 of 2) CpG 948 NM_015492 56905 Hs.17936 NM_015492 HPRD:13154 C15orf39 - chromosome 15 open reading frame 39 protein-coding 0.103846 0.685824 114(AATCGGCT,+,0.00) 41(TCGGCGCC,+,0.00) -31(CACGTACG,+,0.00),-29(CGTACGTG,-,0.00) -86(CCGAGCGA,+,0.00) -15(CGGGTTTG,-,0.00) -93(CCGGGGCCCGAG,+,0.00) -3(CGTGGCGG,+,0.00),37(CGTCTCGG,+,0.00) 4(GCGGCCTGTGTG,+,0.00) 141 chr1 116920625 116920828 + 0 NA intron (NM_001160233, intron 1 of 22) intron (NM_001160233, intron 1 of 22) 4237 NM_001160233 476 Hs.371889 NM_000701 HPRD:01662 ATP1A1 - ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding 0.009852 0.387255 30 chr9 136009409 136009591 + 0 NA intron (NM_001042368, intron 1 of 17) intron (NM_001042368, intron 1 of 17) -2956 NM_001271774 5900 Hs.106185 NM_006266 HPRD:03371 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding 0.027473 0.628415 -5(AAGTCGCT,+,0.00) 51(TCGTGCAG,+,0.00) 100 chr19 5719831 5720131 + 0 NA promoter-TSS (NM_152784) promoter-TSS (NM_152784) 195 NR_076392 9361 Hs.350265 NM_004793 HPRD:05689 LONP1 LON|LONP|LonHS|PIM1|PRSS15|hLON lon peptidase 1, mitochondrial protein-coding 0.133333 0.767442 143(ATCGGCCGCC,-,0.00) 67(GGCGTCGC,-,0.00) 10(CCCCCGCC,-,0.00),125(CCCCCGGC,-,0.00) 5(CAAAACCC,+,0.00) 165(ACCGCGCC,+,0.00) -100(CCGGCGCCCGCG,+,0.00),80(CGCTGGCCTCGG,-,0.00) -12(CGCGGCTGCTCG,-,0.00) 117(GAACCCGCCC,-,0.00) 222 chr12 8085741 8086493 + 0 NA intron (NM_006931, intron 2 of 9) intron (NM_006931, intron 2 of 9) 2775 NM_006931 6515 Hs.419240 NM_006931 HPRD:00686 SLC2A3 GLUT3 solute carrier family 2 (facilitated glucose transporter), member 3 protein-coding 0.010638 0.450199 610(AGCCGATT,-,0.00) 549(GGCCTGGCACTC,-,0.00) 226(ACCGCCCA,+,0.00) 25 chrX 70752465 70753063 + 0 NA promoter-TSS (NM_181672) promoter-TSS (NM_181672) -148 NM_181673 8473 Hs.405410 NM_003605 HPRD:02222 OGT HRNT1|O-GLCNAC O-linked N-acetylglucosamine (GlcNAc) transferase protein-coding 0.068562 0.517529 8(AGACGCCT,-,0.00) 7(TAGACGCC,+,0.00),379(TCGCCGCC,+,0.00) 180(GGGTTGACAGGG,-,0.00) -26(CGTTTTTG,-,0.00),80(CAAAAACG,+,0.00),391(CAAGACCG,+,0.00) 111(TTTACCCT,-,0.00) 201(TGCGCGGT,-,0.00),239(TGCGCGGA,-,0.00) 174(CGAGTCGG,+,0.00) 128 chr16 3767628 3767816 + 0 NA promoter-TSS (NM_001272049) promoter-TSS (NM_001272049) -124 NM_001272049 10131 Hs.30345 NM_016292 HPRD:05868 TRAP1 HSP 75|HSP75|HSP90L|TRAP-1 TNF receptor-associated protein 1 protein-coding 0.127660 0.767196 28(GGAGGTGGGGGA,-,0.00) -42(ACGGTCGG,-,0.00) 53(CCCCCGGC,-,0.00) 39(AGGTGGCCCCGC,-,0.00),48(CGCCGCCCCCGG,-,0.00) -69(CGTGGCGG,+,0.00) 44(GCCCCGCCGC,-,0.00) 28 chr2 120516985 120517380 + 0 NA promoter-TSS (NM_002830) promoter-TSS (NM_002830) -25 NM_002830 5775 Hs.469809 NM_002830 HPRD:01471 PTPN4 MEG|PTPMEG|PTPMEG1 protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte) protein-coding 0.088608 0.669192 102(AGGCCGCT,+,0.00),257(AGCCGCCA,-,0.00) 65(CCGCCTCCCCCC,+,0.00) 47(GGCGGGGG,+,0.00) 30(TCGCGACG,-,0.00),166(TAGCGAGG,-,0.00) 176(GGGTTTTG,-,0.00) 204(GCCTCCTGTTGC,-,0.00) 252(TGCGCAGC,-,0.00) 43(GCGGGGCGGGGG,+,0.00),244(GCGGCGCCTGCG,+,0.00) 36(CGCGGCTGCGGG,-,0.00) 33(CGACGCGG,+,0.00) 258(GCCGCCATGTTC,+,0.00) 40(GCTGCGGGGC,+,0.00) 120 chr7 26904487 26904686 + 0 NA promoter-TSS (NM_003930) promoter-TSS (NM_003930) -245 NM_003930 8935 Hs.200770 NM_003930 HPRD:05558 SKAP2 PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R src kinase associated phosphoprotein 2 protein-coding 0.040201 0.435000 156 chr16 4464490 4464676 + 0 NA intron (NM_024535, intron 1 of 27) intron (NM_024535, intron 1 of 27) 2379 NM_024535 79585 Hs.437957 NM_024535 HPRD:07975 CORO7 0610011B16Rik|CRN7|POD1 coronin 7 protein-coding 0.010753 0.449198 134 chr9 88357308 88357493 + 0 NA promoter-TSS (NM_001286717) promoter-TSS (NM_001286717) -456 NM_015239 23287 Hs.719980 NM_015239 HPRD:08442 AGTPBP1 CCP1|NNA1 ATP/GTP binding protein 1 protein-coding 0.032432 0.505376 40 chr17 33814586 33814932 + 0 NA promoter-TSS (NM_001195790) promoter-TSS (NM_001195790) -1 NM_001195790 100506736 Hs.447559 NM_001145027 ENSG00000205045 SLFN12L - schlafen family member 12-like protein-coding 0.075145 0.533141 179(TCGACTCC,+,0.00) 129(CGCGTCCG,+,0.00),203(CGCACGCG,-,0.00) -91(GCTGTGCCAGCG,+,0.00) 75 chr1 6453854 6454042 + 0 NA promoter-TSS (NM_007274) promoter-TSS (NM_007274) -122 NM_007274 11332 Hs.126137 NM_007274 HPRD:12517 ACOT7 ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH acyl-CoA thioesterase 7 protein-coding 0.095745 0.693122 -9(CCCCCGCC,-,0.00) 11(CGGCACCA,-,0.00) -53(CGGAAGGCGCGG,+,0.00) -91(GCCGCGCC,+,0.00),-76(TGGGCGGC,-,0.00),-48(GGCGCGGC,-,0.00) -47(GCGCGGCCCGGG,+,0.00) -48(GGCGCGGCCC,-,0.00),44(AGATCGGCCC,-,0.00) 83 chr19 6590910 6591239 + 0 NA promoter-TSS (NM_001252) promoter-TSS (NM_001252) 89 NM_001252 970 Hs.501497 NM_001252 HPRD:18515 CD70 CD27L|CD27LG|TNFSF7 CD70 molecule protein-coding 0.085106 0.675758 83(GCCCCCTCCCGG,+,0.00),84(CCCCCTCCCGGG,+,0.00) 103(GGCGTCTA,-,0.00) 169(AGGGGAGGGA,-,0.00) -66(AAAGCAGCCC,-,0.00) 58(CCGAGAAG,-,0.00) -2(GCATCGCCGC,-,0.00) 192 chr22 39898337 39898526 + 0 NA 5' UTR (NM_019008, exon 1 of 6) 5' UTR (NM_019008, exon 1 of 6) 147 NM_019008 54471 Hs.728085 NM_019008 HPRD:13371 MIEF1 HSU79252|MID51|SMCR7L|dJ1104E15.3 mitochondrial elongation factor 1 protein-coding 0.095238 0.705263 -12(CGCGCACG,+,0.00) -14(AGCGCGCA,+,0.00),38(TGGGCGGC,-,0.00) 59 chr14 24657954 24658302 + 0 NA promoter-TSS (NM_024658) promoter-TSS (NM_024658) -4 NR_051979 79711 Hs.411865 NM_024658 HPRD:07022 IPO4 Imp4 importin 4 protein-coding 0.068966 0.616046 -48(CGCCGCTA,+,0.00) -68(CTCCATGGCAGC,-,0.00) 215 chr16 2014500 2014774 + 0 NA promoter-TSS (NR_003020) promoter-TSS (NR_003020) 190 NM_002952 6187 Hs.356366 NM_002952 HPRD:04690 RPS2 LLREP3|S2 ribosomal protein S2 protein-coding 0.113139 0.720000 -81(GGCCCCGGATGC,+,0.00),140(CGACCCGATGTC,+,0.00) -91(CCGCGACCCCGG,+,0.00) 163(GCCGCCCA,+,0.00) -85(CCCCGGCCCCGG,-,0.00) -23(GCCACCAGGGCC,+,0.00) 177 chr19 13263890 13264248 + 0 NA exon (NM_004907, exon 2 of 2) exon (NM_004907, exon 2 of 2) 2787 NM_004907 9592 Hs.501629 NM_004907 HPRD:09997 IER2 ETR101 immediate early response 2 protein-coding 0.097765 0.679666 97(TGCACCGGAGTC,+,0.00) -5(GCCGTCGA,-,0.00) -19(CCCCCGCC,-,0.00) 127(TGCGCAGC,-,0.00) 230(CCGAGAAG,-,0.00) 150 chr1 207494554 207494785 + 0 NA promoter-TSS (NM_000574) promoter-TSS (NM_000574) -148 NM_000574 1604 Hs.126517 NM_000574 HPRD:00500 CD55 CR|CROM|DAF|TC CD55 molecule, decay accelerating factor for complement (Cromer blood group) protein-coding 0.073593 0.616379 39(CCCCCTCTCCCG,-,0.00) 74(TAGCGAGG,-,0.00) 112(CGCAGGCCCCAC,-,0.00) -98(CGCGTCTCAGCG,-,0.00) 155 chr2 101869529 101869737 + 0 NA exon (NM_017546, exon 1 of 7) exon (NM_017546, exon 1 of 7) 288 NM_017546 55571 Hs.744080 NM_017546 HPRD:12812 CNOT11 C2orf29 CCR4-NOT transcription complex, subunit 11 protein-coding 0.100962 0.727273 23(GGAGGAGGCGGG,-,0.00),26(GGAGGCGGGCGG,-,0.00) -90(GGCGGCAGAG,+,0.00) -88(CGGCAGAGGCGG,+,0.00),22(CGGAGGAGGCGG,+,0.00) -80(GCGGAGCAAGCG,+,0.00) -74(CAAGCGGCCC,-,0.00) 83(CAGCAAGGCCGA,-,0.00) 130 chr1 43147646 43147820 + 0 NA promoter-TSS (NM_004559) promoter-TSS (NM_004559) -333 NM_004559 4904 Hs.473583 NM_004559 HPRD:01095 YBX1 BP-8|CSDA2|CSDB|DBPB|MDR-NF1|NSEP-1|NSEP1|YB-1|YB1 Y box binding protein 1 protein-coding 0.091954 0.662857 -67(AGGCGTCT,+,0.00) 38(CCGCCAGCCCGG,+,0.00) 36(GCCCGCCAGCCC,+,0.00) -30(CGGGTAAT,+,0.00) 38(CCGCCAGCCCGG,-,0.00),42(CAGCCCGGCGGC,-,0.00) 217 chr1 153507994 153508405 + 0 NA intron (NM_014624, intron 1 of 2) intron (NM_014624, intron 1 of 2) 518 NM_014624 6277 Hs.275243 NM_014624 HPRD:00237 S100A6 2A9|5B10|CABP|CACY|PRA S100 calcium binding protein A6 protein-coding 0.014599 0.597087 -73(AGGTGGCT,+,0.00) 114(CCTTCCGCACCC,-,0.00) 204(GCGGGGGAGC,+,0.00) 53 chr1 173836897 173837124 + 0 NA promoter-TSS (NR_003941) promoter-TSS (NR_003941) 115 NR_002578 60674 Hs.531856 NR_002578 ENSG00000234741 GAS5 NCRNA00030|SNHG2 growth arrest-specific 5 (non-protein coding) ncRNA 0.048458 0.526316 105(GGAGTCGA,-,0.00),109(TCGACTCC,+,0.00) 65(CAAAACCC,+,0.00) 245 chr2 98329928 98330264 + 0 NA promoter-TSS (NM_001079) promoter-TSS (NM_001079) 65 NM_001079 7535 Hs.234569 NM_001079 HPRD:01495 ZAP70 SRK|STCD|STD|TZK|ZAP-70 zeta-chain (TCR) associated protein kinase 70kDa protein-coding 0.023810 0.605341 52(CCTTCCGGGCAG,-,0.00) 110(AAGCGGCT,+,0.00) 144(GCCACCAGGGCC,+,0.00) 239 chr1 154193442 154193953 + 0 NA promoter-TSS (NM_001297720) promoter-TSS (NM_001297720) 372 NM_001287816 9898 Hs.490551 NM_014847 HPRD:06665 UBAP2L NICE-4 ubiquitin associated protein 2-like protein-coding 0.091977 0.701172 260(ATGCGGCT,+,0.00) 200(GGCCTCGA,-,0.00) 55(TCGGTAGG,-,0.00) 35(CCCCCGCC,-,0.00) 270(AGCCTGAGAGGG,-,0.00) 149(AGGTTTTG,-,0.00) 10(TTTACCCT,-,0.00) 184(GCCGCGCC,+,0.00) -66(GCGGCGGCGGCG,+,0.00),-63(GCGGCGGCGGCG,+,0.00),-57(GCGGCGGCAGCG,+,0.00),-37(GCGGGGCCGGGT,+,0.00),30(CCCTGCCCCCGC,-,0.00) 182(GGGCCGCGCC,+,0.00),224(GGGCGGGGCT,+,0.00) 134(CGAGTCGG,+,0.00) 114(AGCCCTGGCGCC,-,0.00) -40(GCGGCGGGGC,+,0.00) 122 chr16 87902617 87902974 + 0 NA exon (NM_003486, exon 1 of 10) exon (NM_003486, exon 1 of 10) 305 NM_003486 8140 Hs.513797 NM_003486 HPRD:02552 SLC7A5 4F2LC|CD98|D16S469E|E16|LAT1|MPE16|hLAT1 solute carrier family 7 (amino acid transporter light chain, L system), member 5 protein-coding 0.123249 0.687151 -37(TCGCCGCC,+,0.00),200(GGCGCCGA,-,0.00) 52(CAGCGCCAGCCC,+,0.00) 33(CGCACGCG,-,0.00),210(CGTCCGCG,-,0.00) -34(CCGCCCGA,+,0.00) -15(TGGTGCCG,+,0.00),97(CGTCACGA,-,0.00) 232(CATCTTCTCCCG,-,0.00) 35(CACGCGGCCC,-,0.00) -3(CCGCGTAG,-,0.00),220(CTTGGCGG,+,0.00) 143 chr12 51718030 51718207 + 0 NA promoter-TSS (NM_001290009) promoter-TSS (NM_001290009) -136 NM_016293 51411 Hs.14770 NM_016293 HPRD:05805 BIN2 BRAP-1 bridging integrator 2 protein-coding 0.073446 0.719101 -72(GGAGCAGGCCGG,-,0.00) -17(TCGAGGCC,+,0.00) -101(GCCCGCCCCT,+,0.00),-55(AGGGGCGGGC,-,0.00) -97(GCCCCTCAGCCC,+,0.00) -51(GCGGGCCCGGGG,+,0.00) 205 chr20 47444531 47445389 + 0 NA promoter-TSS (NM_020820) promoter-TSS (NM_020820) -540 NM_020820 57580 Hs.153310 NM_020820 HPRD:06066 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding 0.115385 0.721769 43(CTCGGCCGCA,-,0.00) 80(CTGGGGACGCGG,-,0.00),408(CCGGGAAGTCAG,-,0.00),474(CCGGGAACGCCG,-,0.00) 100(TCGGCGCC,+,0.00) -10(CGGCTGGCCCCC,-,0.00) 177(CGCGCACG,+,0.00),212(CGGACGCG,-,0.00) 108(TCCGTCGG,-,0.00),127(TCGGGCGG,-,0.00) -45(AGGGGCGGGA,-,0.00) -92(GCCGGGCG,+,0.00),-79(GCCGGGGG,+,0.00),-53(GCCGGGCG,+,0.00),-2(CCCCCGCC,-,0.00) 110(CGTCGGAA,+,0.00),166(GTCCGAGG,-,0.00) 90(GGCGCGGC,-,0.00) -84(GCTGGGCCGGGG,+,0.00),-72(GCGGAGGCAGCG,+,0.00),-53(GCCGGGCGAGGG,+,0.00),-9(GGCTGGCCCCCC,-,0.00),-1(CCCCGCCCCCGC,-,0.00) 87(CGCGGCGCGGCG,+,0.00),87(CGCGGCGCGGCG,-,0.00),153(CGCGGAGCCGGG,+,0.00),357(TGCGGAGCCGCT,+,0.00),393(CGCGCCTCCGCG,-,0.00),401(CGCGGCCCCGGG,-,0.00) 385(CCGCCACG,-,0.00) 355(GCTGCGGAGC,+,0.00) 158 chr12 50898893 50899066 + 0 NA exon (NM_173602, exon 1 of 38) exon (NM_173602, exon 1 of 38) 211 NM_173602 57609 Hs.505516 NM_020849 HPRD:08751 DIP2B - DIP2 disco-interacting protein 2 homolog B (Drosophila) protein-coding 0.121387 0.758621 -76(CTGGGATGGCGG,-,0.00),41(CCGGGGAGAGGG,-,0.00) 10(GAGCTGGAGCTC,-,0.00) -67(CGGAACGA,-,0.00) -46(CGCCGGCCGCGG,-,0.00),35(GCCGGGCCGGGG,+,0.00) 33(GAGCCGGGCCGG,-,0.00) 42 chr11 102322583 102322773 + 0 NA intron (NM_052932, intron 1 of 4) CpG 1097 NM_052932 114908 Hs.503709 NM_052932 ENSG00000152558 TMEM123 KCT3|PORIMIN|PORMIN transmembrane protein 123 protein-coding 0.105263 0.654450 35(AGCCCCGAAGTC,+,0.00) -12(CCGCGAGGGCGG,-,0.00) -79(TCGGCCGG,-,0.00) -7(AGGGCGGGGC,-,0.00) -100(GCTGCGCA,+,0.00),-98(TGCGCAGC,-,0.00) -40(CCCGCCATGGGG,+,0.00),-38(CGCCATGGGGGC,-,0.00) -100(GCTGCGCAGC,+,0.00),-100(GCTGCGCAGC,-,0.00) 22 chr5 79286079 79286253 + 0 NA intron (NM_001167741, intron 1 of 7) intron (NM_001167741, intron 1 of 7) 922 NM_001167741 345778 Hs.531418 NM_001010891 MTX3 - metaxin 3 protein-coding 0.017241 0.360000 219 chr22 50908423 50908592 + 0 NA intron (NM_002972, intron 1 of 40) intron (NM_002972, intron 1 of 40) 4957 NM_002972 6305 Hs.589924 NM_002972 HPRD:06788 SBF1 CMT4B3|DENND7A|MTMR5 SET binding factor 1 protein-coding 0.041420 0.711765 -48(AGGTGTCT,+,0.00) -94(CCCACCGA,+,0.00) 46 chr1 244211345 244211545 + 0 NA promoter-TSS (NM_001278196) promoter-TSS (NM_001278196) -796 NM_001278196 10472 Hs.69997 NM_006352 HPRD:12231 ZBTB18 C2H2-171|MRD22|RP58|TAZ-1|ZNF238 zinc finger and BTB domain containing 18 protein-coding 0.090000 0.661692 8(TCGCCGCC,+,0.00) -9(CCCTCCCAGCGC,+,0.00) -39(TGCGCGGG,-,0.00) -56(GCTCCGCACC,-,0.00) 13 chr4 36287843 36288279 + 0 NA intron (NM_001170700, intron 1 of 8) intron (NM_001170700, intron 1 of 8) 2417 NM_001170700 401124 Hs.363407 NM_001136536 DTHD1 - death domain containing 1 protein-coding 0.009174 0.409611 144(CAAAACCT,+,0.00) 235 chr17 48944310 48944803 + 0 NA promoter-TSS (NM_001243885) promoter-TSS (NM_001243885) 516 NR_038458 400604 Hs.641441 NR_038458 ENSG00000229980 TOB1-AS1 - TOB1 antisense RNA 1 ncRNA 0.062880 0.582996 32(CCGCCCCGCCGG,+,0.00),67(CAGGCCTCCCGG,+,0.00) -3(GGGCTGGGGGTG,-,0.00) 148(CGACACGA,-,0.00) 346(CGGGTAAG,+,0.00) 29(CTCCCGCCCCGC,-,0.00) -12(CGTGGAGCCGGG,+,0.00) 93(CGACTCGG,+,0.00) 105 chr6 52149918 52150287 + 0 NA promoter-TSS (NM_001270472) promoter-TSS (NM_001270472) -423 NM_001270472 4172 Hs.179565 NM_002388 HPRD:04072 MCM3 HCC5|P1-MCM3|P1.h|RLFB minichromosome maintenance complex component 3 protein-coding 0.024390 0.383784 204(AGAGACTT,-,0.00) -92(TTGACCCG,-,0.00),189(TTTACCCT,-,0.00) 6 chr2 97202904 97203112 + 0 NA intron (NM_212481, intron 1 of 6) CpG 544 NM_212481 10865 Hs.920 NM_006673 HPRD:12481 ARID5A MRF-1|MRF1|RP11-363D14 AT rich interactive domain 5A (MRF1-like) protein-coding 0.105769 0.674641 33(GACTCCGGGTCC,-,0.00) 88(GGGCTGCGCGGG,-,0.00) 8(CAGAACCG,+,0.00) 92(TGCGCGGG,-,0.00) 15(GCGGCGCCGCCG,+,0.00) 14(CGCGGCGCCGCC,+,0.00),14(CGCGGCGCCGCC,-,0.00) 85 chr6 25138774 25139084 + 0 NA promoter-TSS (NR_027626) promoter-TSS (NR_027626) -309 NR_027626 8418 Hs.484918 NR_002174 CMAHP CMAH|CSAH cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene pseudo 0.006452 0.395498 185 chr12 96429354 96429971 + 0 NA promoter-TSS (NM_000895) promoter-TSS (NM_000895) -223 NM_000895 4048 Hs.524648 NM_000895 HPRD:01056 LTA4H - leukotriene A4 hydrolase protein-coding 0.051864 0.511327 -83(GGAGGAGGGAGA,-,0.00) 284(AGGGCGGGGC,-,0.00) 31(TGGTGCCG,+,0.00),334(TCGTGCGG,+,0.00) -101(CGTCGATA,+,0.00),279(TAGCGAGG,-,0.00) -13(GTCAGACG,-,0.00) 298(CAAAAACG,+,0.00) 150(GGTGGCCGAAGG,+,0.00) 38(GCGCGGCAAGCG,+,0.00) 36 chr3 15387491 15387676 + 0 NA Intergenic MLT1G1|LTR|ERVL-MaLR -4682 NM_001018009 9467 Hs.257761 NM_004844 HPRD:12030 SH3BP5 SAB|SH3BP-5 SH3-domain binding protein 5 (BTK-associated) protein-coding 0.000000 0.424731 3 chr20 25038745 25039344 + 0 NA promoter-TSS (NM_001252675) promoter-TSS (NM_001252675) -226 NM_001252677 84532 Hs.529353 NM_032501 HPRD:12413 ACSS1 ACAS2L|ACECS1|AceCS2L acyl-CoA synthetase short-chain family member 1 protein-coding 0.065109 0.691667 14(GCCCCCTCCCGG,+,0.00),342(CCGGGAGGGAGC,-,0.00) 371(GGGCTGGTGCAC,-,0.00) 411(TAGGTCGG,-,0.00),415(TCGGTCAG,-,0.00) 354(CGGCACCA,-,0.00) 60(CGGGAGAGGGGG,+,0.00) 206(CTGTTTTG,-,0.00) -36(CGCGGGCCCCGC,-,0.00),-35(GCGGGCCCCGCC,+,0.00),143(CCCTGGCCCAGG,-,0.00) 71(GGGCCGCTTA,+,0.00) 197(CGAGTCGG,+,0.00) 213 chr11 3862503 3863240 + 0 NA promoter-TSS (NM_001665) promoter-TSS (NM_001665) -658 NM_001665 391 Hs.501728 NM_001665 HPRD:01537 RHOG ARHG ras homolog family member G protein-coding 0.051560 0.604336 120(GGCGCAGGCGGA,-,0.00) -45(GGTGGCCGAG,+,0.00) 132(GCCGCGGG,+,0.00) -30(GGCAGTCCCCGC,-,0.00) 126(GGCGGAGCCGCG,+,0.00) 183(CCTGCGAGGC,+,0.00) 188(GAGGCCTGGCTC,+,0.00) 183 chr8 29948041 29948247 + 0 NA intron (NR_039605, intron 1 of 1) MER4A|LTR|ERV1 -4778 NM_001128208 23484 Hs.146585 NM_015344 HPRD:09551 LEPROTL1 HSPC112|Vps55|my047 leptin receptor overlapping transcript-like 1 protein-coding 0.014563 0.478261 54(AACCACTT,-,0.00) -27(CAGACCGA,+,0.00) 94 chr3 107940943 107941144 + 0 NA exon (NM_018010, exon 1 of 11) exon (NM_018010, exon 1 of 11) 374 NM_018010 55081 Hs.412196 NM_018010 HPRD:09430 IFT57 ESRRBL1|HIPPI|MHS4R2 intraflagellar transport 57 protein-coding 0.084577 0.658416 86(CAAACCCG,+,0.00) 15(GCCGCGCC,+,0.00) 146 chr14 90863284 90863629 + 0 NA 5' UTR (NM_006888, exon 1 of 6) 5' UTR (NM_006888, exon 1 of 6) 129 NM_006888 801 Hs.282410 NM_006888 HPRD:00241 CALM1 CALML2|CAMI|CPVT4|DD132|PHKD|caM calmodulin 1 (phosphorylase kinase, delta) protein-coding 0.136232 0.705202 -82(AGGCGGCT,+,0.00),100(AGCGGCAT,-,0.00) 9(TGGACGCC,+,0.00) 193(TAGGTCGG,-,0.00) 116(CCCCCGCC,-,0.00) 15(CCGTGCCG,+,0.00) 122(CCGTCGCAGCCC,+,0.00) 49(GCGGCGGCGGCG,+,0.00),126(CGCAGCCCCCGC,-,0.00) -96(CGCCGCTCTGCG,-,0.00),-81(GGCGGCTCCGCC,-,0.00) -84(CGAGGCGG,+,0.00) -77(GCTCCGCCGC,-,0.00),37(GCGGCGGCGC,+,0.00),122(CCGTCGCAGC,-,0.00) 51 chr10 70715522 70715754 + 0 NA promoter-TSS (NM_004728) promoter-TSS (NM_004728) -241 NM_004728 9188 Hs.223141 NM_004728 HPRD:05895 DDX21 GUA|GURDB|RH-II/GU|RH-II/GuA DEAD (Asp-Glu-Ala-Asp) box helicase 21 protein-coding 0.047414 0.476395 9 chr14 81408117 81408318 + 0 NA Intergenic Intergenic -2333 NM_152446 145508 Hs.162889 NM_152446 HPRD:09834 CEP128 C14orf145|C14orf61|LEDP/132 centrosomal protein 128kDa protein-coding 0.044776 0.519802 17(CGGGTAAC,+,0.00),30(CGGATAAA,+,0.00) 52(GCCGCGCC,+,0.00) 111 chr4 57302414 57302660 + 0 NA promoter-TSS (NM_002703) promoter-TSS (NM_002703) 268 NM_001079524 10606 Hs.518774 NM_006452 HPRD:01401 PAICS ADE2|ADE2H1|AIRC|PAIS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase protein-coding 0.101626 0.688259 -10(GGATCCGGGCCC,-,0.00),123(GCTCCCGGGCCT,-,0.00) 125(TCCCGGGCCT,+,0.00) -70(GGCGCGGT,-,0.00) -77(GCTTCCCGGC,-,0.00) 38 chr20 61585364 61585805 + 0 NA intron (NM_022082, intron 1 of 12) intron (NM_022082, intron 1 of 12) 1585 NM_022082 63910 Hs.512686 NM_022082 HPRD:12777 SLC17A9 C20orf59|VNUT solute carrier family 17 (vesicular nucleotide transporter), member 9 protein-coding 0.045351 0.597285 167(CCGCCCTCCTGC,+,0.00) 179(AGCCACAT,-,0.00) 194(GCTGGGCCAGGC,+,0.00),253(GCCTGGCCCGGC,-,0.00),258(GCCCGGCCCCGC,-,0.00) 4 chr12 38710402 38710756 + 0 NA promoter-TSS (NM_001013620) promoter-TSS (NM_001013620) 22 NM_001013620 144245 Hs.259305 NM_001013620 ALG10B ALG10|KCR1 ALG10B, alpha-1,2-glucosyltransferase protein-coding 0.076271 0.577465 218(CTCGGCCGCC,-,0.00) 207(GGTTACTGTTTC,-,0.00) -85(AGACCCGCCC,-,0.00) 34 chr17 75136229 75136761 + 0 NA promoter-TSS (NM_001143999) promoter-TSS (NM_001143999) -510 NM_001039573 6397 Hs.464184 NM_003003 HPRD:03295 SEC14L1 PRELID4A|SEC14L SEC14-like 1 (S. cerevisiae) protein-coding 0.082707 0.673546 145(TCCGCCTCCTCC,+,0.00),386(TCCGCCTCCGCC,+,0.00) 80(ATGCCGCT,+,0.00),246(AGCCGCCA,-,0.00) 175(GCGGTCGG,-,0.00) 38(CCCGCGGC,-,0.00) 42(CGGCCCGA,-,0.00) 334(CCCGCTCAGCCG,+,0.00) 304(TGGTTTTG,-,0.00) 330(TTTTCCCG,-,0.00) 128(GCCGCGCA,+,0.00) 12(CCCTGGGCGCGC,-,0.00),416(GCCCGGCCCCGC,-,0.00) 415(AGCCCGGCCC,-,0.00) 247(GCCGCCAGGGCG,+,0.00),249(CGCCAGGGCGAC,-,0.00) 128(GCCGCGCAGC,-,0.00) 414(CAGCCCGGCCCC,-,0.00) 169 chr20 58515492 58515788 + 0 NA promoter-TSS (NM_006242) promoter-TSS (NM_006242) 196 NM_001190827 63939 Hs.54973 NM_022106 HPRD:12758 FAM217B C20orf177|dJ551D2.5 family with sequence similarity 217, member B protein-coding 0.084459 0.595960 181(TCGAGGCC,+,0.00) -82(GCCGGGCG,+,0.00) 136(AAAAACCG,+,0.00) -68(CGCGGGCGCCGG,-,0.00) -90(GCGCCGCAGC,-,0.00) 164 chr19 48833314 48833551 + 0 NA intron (NM_001425, intron 4 of 4) CpG 4803 NM_001425 2014 Hs.9999 NM_001425 HPRD:18514 EMP3 YMP epithelial membrane protein 3 protein-coding 0.046414 0.529412 2(GGCGGGGG,+,0.00) 132 chr17 79479644 79479821 + 0 NA 5' UTR (NM_001199954, exon 1 of 6) 5' UTR (NM_001199954, exon 1 of 6) 160 NR_037688 71 Hs.514581 NM_001614 HPRD:00017 ACTG1 ACT|ACTG|BRWS2|DFNA20|DFNA26|HEL-176 actin, gamma 1 protein-coding 0.135593 0.747191 -90(CGGGGAAGGCGC,-,0.00) -56(GCGGGGCCAGCC,+,0.00),-12(CTCAGGCCCCGG,-,0.00) 31(GGCGGAGCGGCG,+,0.00) 196 chr1 46806295 46806753 + 0 NA promoter-TSS (NM_001256127) promoter-TSS (NM_001256127) -326 NM_001256128 387338 Hs.163424 NM_199044 NSUN4 SHTAP NOP2/Sun domain family, member 4 protein-coding 0.089520 0.612200 279(TAGCGTCT,+,0.00) 33(CCACCTCCCCGG,+,0.00) 20(CGGGTGGCGCTC,-,0.00) 70(CCGGTCGG,-,0.00) 259(TCCCGGCCCT,+,0.00) 154(TCGCGACG,-,0.00) -60(GGGCGGAGTC,+,0.00) 171 chr19 49977433 49977668 + 0 NA promoter-TSS (NM_001204503) promoter-TSS (NM_001204503) 84 NM_001278638 2323 Hs.428 NM_001459 HPRD:02477 FLT3LG FL|FLT3L fms-related tyrosine kinase 3 ligand protein-coding 0.021277 0.648305 71(GGGAGCAGAGGG,+,0.00) 40(GCGGAGCCAGGG,+,0.00) 38(GGGCGGAGCC,+,0.00) 242 chr19 46010570 46010790 + 0 NA promoter-TSS (NM_003370) promoter-TSS (NM_003370) -8 NM_003370 7408 Hs.515469 NM_003370 HPRD:03415 VASP - vasodilator-stimulated phosphoprotein protein-coding 0.081818 0.606335 87(AGCCGCCA,-,0.00) -14(CGCACGCG,-,0.00) -71(GGAAGCCGAGGG,+,0.00) 106(TGCGCGCT,-,0.00) -12(CACGCGGCCC,-,0.00)