Information for motif12


Reverse Opposite:

p-value:1e-74
log p-value:-1.723e+02
Information Content per bp:1.530
Number of Target Sequences with motif106.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets105.7 +/- 54.4bp
Average Position of motif in Background78.2 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0522.1_Tcf3/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTCCAGCTCCAG
-CACAGCTGCAG

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CTCCAGCTCCAG
-----GCTCCG-

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCCAGCTCCAG
--NCAGCTGCTG

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTCCAGCTCCAG
ACTACAATTCCC-

MA0024.2_E2F1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTCCAGCTCCAG
CCTCCCGCCCN--

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTCCAGCTCCAG---
CTCAGCAGCTGCTACTG

MA0469.1_E2F3/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTCCAGCTCCAG---
CTCCCGCCCCCACTC

MA0471.1_E2F6/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTCCAGCTCCAG
NCTTCCCGCCC---

MA0500.1_Myog/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTCCAGCTCCAG
NNGCAGCTGTC-

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTCCAGCTCCAG
GGTCCCGCCC---