Information for motif17


Reverse Opposite:

p-value:1e-29
log p-value:-6.835e+01
Information Content per bp:1.674
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets115.5 +/- 56.2bp
Average Position of motif in Background63.7 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---ATATATATATTC-
NANTTATATATAANGN

PB0198.1_Zfp128_2/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ATATATATATTC-
NNTATANATATACN

PB0163.1_Six6_2/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ATATATATATTC---
ANNNGGATATATCCNNN

MA0033.1_FOXL1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATATATATATTC
-TATACATA---

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------ATATATATATTC
NNNNNNCTTTTATAN----

MA0108.2_TBP/Jaspar

Match Rank:6
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------ATATATATATTC
NNNNNNCTTTTATAN----

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATATATATATTC-
NNTNNCAATATTAG

PB0186.1_Tcf3_2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATATATATATTC----
-NNTTTNTTTTNGNNN

MA0042.1_FOXI1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATATATATATTC
GGATGTTTGTTT--

PB0019.1_Foxl1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ATATATATATTC-
NNNTTTGTTTACATTTN