Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
PDF |
1 |  | Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-5 | -1.204e+01 | 0.0015 | 170.0 | 1.01% | 89.3 | 0.71% | motif file (matrix) |
pdf |
2 |  | Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer | 1e-5 | -1.184e+01 | 0.0015 | 660.0 | 3.93% | 416.5 | 3.31% | motif file (matrix) |
pdf |
3 |  | Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.104e+01 | 0.0015 | 482.0 | 2.87% | 297.5 | 2.37% | motif file (matrix) |
pdf |
4 |  | RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-4 | -1.025e+01 | 0.0022 | 146.0 | 0.87% | 77.8 | 0.62% | motif file (matrix) |
pdf |
5 |  | X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-4 | -9.602e+00 | 0.0033 | 225.0 | 1.34% | 129.7 | 1.03% | motif file (matrix) |
pdf |
6 |  | Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-3 | -8.930e+00 | 0.0054 | 3529.0 | 20.99% | 2497.5 | 19.86% | motif file (matrix) |
pdf |
7 |  | Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -8.322e+00 | 0.0085 | 341.0 | 2.03% | 210.9 | 1.68% | motif file (matrix) |
pdf |
8 |  | Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer | 1e-3 | -7.982e+00 | 0.0105 | 258.0 | 1.53% | 155.1 | 1.23% | motif file (matrix) |
pdf |
9 |  | FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-3 | -7.804e+00 | 0.0112 | 117.0 | 0.70% | 63.9 | 0.51% | motif file (matrix) |
pdf |
10 |  | Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.515e+00 | 0.0134 | 1267.0 | 7.54% | 866.2 | 6.89% | motif file (matrix) |
pdf |
11 |  | GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-3 | -7.361e+00 | 0.0142 | 191.0 | 1.14% | 112.6 | 0.90% | motif file (matrix) |
pdf |
12 |  | Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.716e+00 | 0.0248 | 187.0 | 1.11% | 111.5 | 0.89% | motif file (matrix) |
pdf |
13 |  | HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-2 | -6.219e+00 | 0.0377 | 1204.0 | 7.16% | 830.8 | 6.61% | motif file (matrix) |
pdf |
14 |  | ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.968e+00 | 0.0450 | 6.0 | 0.04% | 1.9 | 0.02% | motif file (matrix) |
pdf |
15 |  | Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.886e+00 | 0.0456 | 386.0 | 2.30% | 250.7 | 1.99% | motif file (matrix) |
pdf |
16 |  | Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-2 | -5.777e+00 | 0.0476 | 39.0 | 0.23% | 18.8 | 0.15% | motif file (matrix) |
pdf |
17 |  | GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.619e+00 | 0.0525 | 370.0 | 2.20% | 240.1 | 1.91% | motif file (matrix) |
pdf |
18 |  | HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer | 1e-2 | -5.066e+00 | 0.0862 | 180.0 | 1.07% | 111.8 | 0.89% | motif file (matrix) |
pdf |
19 |  | p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer | 1e-2 | -4.932e+00 | 0.0887 | 123.0 | 0.73% | 73.4 | 0.58% | motif file (matrix) |
pdf |
20 |  | p53(p53)/Saos-p53-ChIP-Seq/Homer | 1e-2 | -4.932e+00 | 0.0887 | 123.0 | 0.73% | 73.4 | 0.58% | motif file (matrix) |
pdf |
21 |  | Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-2 | -4.678e+00 | 0.1089 | 2096.0 | 12.47% | 1493.2 | 11.87% | motif file (matrix) |
pdf |