Information for motif2


Reverse Opposite:

p-value:1e-39
log p-value:-9.089e+01
Information Content per bp:1.811
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets103.2 +/- 54.3bp
Average Position of motif in Background5.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCGGGCG
GGTCCCGCCC-

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GTCCCGGGCG-
ACCACTCTCGGTCAC

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTCCCGGGCG-
NGTCCCNNGGGA

MA0154.2_EBF1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTCCCGGGCG--
-TCCCTGGGGAN

MA0470.1_E2F4/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTCCCGGGCG
NNTTCCCGCCC-

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTCCCGGGCG-
AGTATTCTCGGTTGC

MA0024.2_E2F1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCGGGCG
CCTCCCGCCCN

MA0469.1_E2F3/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTCCCGGGCG-----
CTCCCGCCCCCACTC

PB0204.1_Zfp740_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCGGGCG------
ANTNCCGGGGGGAANTT

MA0471.1_E2F6/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTCCCGGGCG
NCTTCCCGCCC-