Information for motif16


Reverse Opposite:

p-value:1e-20
log p-value:-4.740e+01
Information Content per bp:1.698
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets91.0 +/- 53.6bp
Average Position of motif in Background115.7 +/- 67.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ACAAATTACACC-----
ATAAATGACACCTATCA

MA0075.1_Prrx2/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ACAAATTACACC
---AATTA----

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACAAATTACACC-
GAAAAAATTGCAAGG

MA0125.1_Nobox/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACAAATTACACC
ACCAATTA----

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACAAATTACACC-----
TCNCTTTACAGCGNNNT

PH0039.1_Mnx1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ACAAATTACACC
NNNCACTAATTANTNN

PH0157.1_Rhox11_1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACAAATTACACC-----
TCNNTTTACAGCGNNNT

PH0175.1_Vax2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ACAAATTACACC
GTGCACTAATTAAGAC

PB0177.1_Sox7_2/Jaspar

Match Rank:9
Score:0.58
Offset:-11
Orientation:reverse strand
Alignment:-----------ACAAATTACACC
NNCNNNCNCANACAATTAGNAC-

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:ACAAATTACACC-
-----TGACACCT