Information for motif23


Reverse Opposite:

p-value:1e-64
log p-value:-1.497e+02
Information Content per bp:1.530
Number of Target Sequences with motif128.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets87.6 +/- 51.6bp
Average Position of motif in Background149.1 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GATGGCGGAT
CAAGATGGCGGC-

MA0095.2_YY1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GATGGCGGAT
CAAGATGGCGGC-

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GATGGCGGAT----
NAGANTGGCGGGGNGNA

MA0461.1_Atoh1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GATGGCGGAT
CAGATGGC----

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GATGGCGGAT
AACAGATGGC----

PB0108.1_Atf1_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GATGGCGGAT---
GAATGACGAATAAC

PB0143.1_Klf7_2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GATGGCGGAT----
NNNTNGGGCGTATNNTN

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GATGGCGGAT-
---GGCVGTTR

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GATGGCGGAT---
---DCCGGAARYN

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GATGGCGGAT--
--TGGCAGTTGG