Information for motif24


Reverse Opposite:

p-value:1e-17
log p-value:-3.976e+01
Information Content per bp:1.597
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets92.2 +/- 53.1bp
Average Position of motif in Background154.7 +/- 2.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCGTCAGGATT
TGAGTCAGCA--

MA0496.1_MAFK/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCGTCAGGATT--
CTGAGTCAGCAATTT

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AGCGTCAGGATT-
-----NGGGATTA

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGCGTCAGGATT---
HWWGTCAGCAWWTTT

MA0495.1_MAFF/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGCGTCAGGATT----
GCTGAGTCAGCAATTTTT

PB0042.1_Mafk_1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCGTCAGGATT----
-AAGTCAGCANTTTTN

PB0077.1_Spdef_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCGTCAGGATT---
GTACATCCGGATTTTT

PB0185.1_Tcf1_2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGCGTCAGGATT---
-TTGCCCGGATTAGG

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGCGTCAGGATT-
---ANCAGGATGT

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:AGCGTCAGGATT---
-------GGATTAGC