p-value: | 1e-59 |
log p-value: | -1.368e+02 |
Information Content per bp: | 1.804 |
Number of Target Sequences with motif | 51.0 |
Percentage of Target Sequences with motif | 0.23% |
Number of Background Sequences with motif | 1.9 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 108.2 +/- 52.3bp |
Average Position of motif in Background | 96.0 +/- 70.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGTCAGGCAGHA TGTCTGDCACCT |
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MA0092.1_Hand1::Tcfe2a/Jaspar
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGTCAGGCAGHA GGTCTGGCAT-- |
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MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGTCAGGCAGHA CTGTCTGTCACCT |
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MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGTCAGGCAGHA --TGAGTCAGCA |
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Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 5 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGTCAGGCAGHA- SCAGYCADGCATGAC |
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MA0067.1_Pax2/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGTCAGGCAGHA AGTCACGC---- |
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bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGTCAGGCAGHA---- WNAGTCADAVTGAAACTN |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGTCAGGCAGHA CTGTCTGG----- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGTCAGGCAGHA VBSYGTCTGG----- |
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ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGTCAGGCAGHA --ACAGGAAGTG |
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