Information for motif7


Reverse Opposite:

p-value:1e-36
log p-value:-8.470e+01
Information Content per bp:1.697
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets95.8 +/- 60.8bp
Average Position of motif in Background129.0 +/- 40.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0153.1_HNF1B/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGTAAAGTATTA-
-GTTAAATATTAA

MF0010.1_Homeobox_class/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGTAAAGTATTA
----AATTATT-

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGTAAAGTATTA-
GGTTAAACATTAA

MA0124.1_NKX3-1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGTAAAGTATTA
---TAAGTAT--

PH0038.1_Hlx/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGTAAAGTATTA---
TGTAATTAATTATGG

MA0046.1_HNF1A/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGTAAAGTATTA---
-GNTAATNATTAACC

PH0018.1_Dbx1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGTAAAGTATTA----
TAATTAATTAATAATTA

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGTAAAGTATTA
AATGGAAAAT----

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------TGTAAAGTATTA
AGGACGCTGTAAAGGGA--

NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGTAAAGTATTA-----
NANTGGAAAAANTGAGTCAN