Information for motif28


Reverse Opposite:

p-value:1e-15
log p-value:-3.640e+01
Information Content per bp:1.873
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets107.4 +/- 55.8bp
Average Position of motif in Background86.6 +/- 47.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GCWGCGGTTG-
-BRRCVGTTDN

MA0133.1_BRCA1/Jaspar

Match Rank:2
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GCWGCGGTTG-
----GTGTTGN

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCWGCGGTTG
--GGCVGTTR

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCWGCGGTTG----
CACGGCAGTTGGTNN

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCWGCGGTTG-
-TGGCAGTTGG

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCWGCGGTTG
GCAGTGATTT

MA0483.1_Gfi1b/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCWGCGGTTG
TGCTGTGATTT

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCWGCGGTTG
-TGTCGGTT-

MA0521.1_Tcf12/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCWGCGGTTG
NNGCAGCTGTT-

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCWGCGGTTG----
NNNTGGCAGTTGGTNN