Information for motif8


Reverse Opposite:

p-value:1e-24
log p-value:-5.747e+01
Information Content per bp:1.842
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets87.9 +/- 59.4bp
Average Position of motif in Background82.7 +/- 45.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAAGCCGCTC---
--AGCCACTCAAG

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAAGCCGCTC---
ATAAGGGCGCGCGAT

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AAAGCCGCTC-
AGCAACAGCCGCACC

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAAGCCGCTC---
ATAAAGGCGCGCGAT

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAAGCCGCTC--
--AASCACTCAA

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AAAGCCGCTC--
------GCTCCG

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AAAGCCGCTC
-----NGCTN

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AAAGCCGCTC----
NNAGTCCCACTCNNNN

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AAAGCCGCTC
NTCAAGGTCA---

MA0599.1_KLF5/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AAAGCCGCTC---
---GCCCCGCCCC