Information for motif46


Reverse Opposite:

p-value:1e-5
log p-value:-1.223e+01
Information Content per bp:1.530
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.0 +/- 50.0bp
Average Position of motif in Background93.9 +/- 5.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCGATAG-
AGCCAATCGG

MA0117.1_Mafb/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCCGATAG
GCTGACGC

PB0127.1_Gata6_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCGATAG-------
GCGGCGATATCGCAGCG

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCCGATAG----
NNNACCGAGAGTNNN

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCCGATAG
GGCVGTTR-

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCCGATAG-
GGTGYTGACAGS

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCCGATAG--
--AGATAASR

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCCGATAG--
NBWGATAAGR

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCCGATAG------
TAAACTGATAAGAAGAT

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCCGATAG----
GNNACCGAGAATNNN