Information for motif27


Reverse Opposite:

p-value:1e-15
log p-value:-3.640e+01
Information Content per bp:1.818
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets92.0 +/- 49.1bp
Average Position of motif in Background168.2 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TCACAGGSGTCA
-CACAGN-----

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCACAGGSGTCA
-NNCAGGTGNN-

MA0154.2_EBF1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCACAGGSGTCA
TCCCTGGGGAN-

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCACAGGSGTCA
ACWTCAAAGG-----

PB0047.1_Myf6_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCACAGGSGTCA-
GAAGAACAGGTGTCCG

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TCACAGGSGTCA
----AGGTGTCA

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCACAGGSGTCA
ACATCAAAGG-----

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCACAGGSGTCA
NNATTGACAGGTGCTT

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCACAGGSGTCA----
NTNNNAGGAGTCTCNTN

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCACAGGSGTCA-----
GGCGAGGGGTCAAGGGC