Information for motif35


Reverse Opposite:

p-value:1e-18
log p-value:-4.313e+01
Information Content per bp:1.810
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets103.2 +/- 54.1bp
Average Position of motif in Background129.0 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0102.3_CEBPA/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ATTGCGAAAT
NATTGTGCAAT

CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATTGCGAAAT
GTTGCGCAAT

MA0466.1_CEBPB/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATTGCGAAAT-
ATTGTGCAATA

MA0043.1_HLF/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATTGCGAAAT-
NATTACGTAACC

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATTGCGAAAT
ATTGCATAA-

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATTGCGAAAT---
CAATTGCAAAAATAT

PH0037.1_Hdx/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATTGCGAAAT-------
AAGGCGAAATCATCGCA

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATTGCGAAAT
CSTGGGAAAD

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATTGCGAAAT-
-TTGCAACATN

MA0078.1_Sox17/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATTGCGAAAT
CTCATTGTC----