Information for motif40


Reverse Opposite:

p-value:1e-13
log p-value:-3.155e+01
Information Content per bp:1.530
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets85.4 +/- 45.0bp
Average Position of motif in Background87.1 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---TGCTACCG-----
TNNTGCTACTGTNNNN

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---TGCTACCG-----
CNNNGCTACTGTANNN

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---TGCTACCG-----
ACATGCTACCTAATAC

PB0155.1_Osr2_2/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TGCTACCG-----
ACTTGCTACCTACACC

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGCTACCG
CNGTCCTCCC-

PB0059.1_Six6_1/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTACCG----
ANANNTGATACCCNATN

MA0111.1_Spz1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGCTACCG-
GCTGTTACCCT

PH0161.1_Six1/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTACCG----
ANNNATGATACCCCATC

PH0166.1_Six6_2/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTACCG----
AATNTTGATACCCTATN

PH0165.1_Six6_1/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTACCG----
ANANNTGATACCCTATN