Information for motif11


Reverse Opposite:

p-value:1e-21
log p-value:-4.958e+01
Information Content per bp:1.870
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets75.0 +/- 48.3bp
Average Position of motif in Background66.4 +/- 1.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AATGCCATCGCC
AGATGCAATCCC-

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AATGCCATCGCC--
ACTATGCCAACCTACC

MA0488.1_JUN/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AATGCCATCGCC--
-ATGACATCATCNN

MA0161.1_NFIC/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AATGCCATCGCC
--TGCCAA----

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AATGCCATCGCC---
NATGACATCATCNNN

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AATGCCATCGCC-
-ATGACGTCATCN

MA0468.1_DUX4/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AATGCCATCGCC
TAATTTAATCA--

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AATGCCATCGCC
SCTGTCARCACC

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AATGCCATCGCC
-TTGCCAAG---

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AATGCCATCGCC-
-ATGACGTCATCN