Information for motif24


Reverse Opposite:

p-value:1e-28
log p-value:-6.601e+01
Information Content per bp:1.449
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets100.7 +/- 58.1bp
Average Position of motif in Background94.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AACTTCGCCG
-GCTTCC---

PB0058.1_Sfpi1_1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AACTTCGCCG---
NNACTTCCTCTTNN

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AACTTCGCCG-
-ACTTCCTBGT

PB0161.1_Rxra_2/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AACTTCGCCG
NNNNCAACCTTCGNGA

MA0109.1_Hltf/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AACTTCGCCG
AACCTTATAT-

MA0164.1_Nr2e3/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AACTTCGCCG
CAAGCTT-----

NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AACTTCGCCG
GGAAATTCCC--

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AACTTCGCCG
CACTTCCTCT

POL005.1_DPE/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AACTTCGCCG
NACATCTTN----

MA0122.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AACTTCGCCG
NCCACTTAN---