Information for motif42


Reverse Opposite:

p-value:1e-16
log p-value:-3.725e+01
Information Content per bp:1.676
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets109.6 +/- 56.7bp
Average Position of motif in Background81.0 +/- 1.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0162.2_EGR1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CGGCGGCGGCGG---
-GGCGGGGGCGGGGG

PB0010.1_Egr1_1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CGGCGGCGGCGG-
ANTGCGGGGGCGGN

MA0516.1_SP2/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CGGCGGCGGCGG---
GGGNGGGGGCGGGGC

MA0079.3_SP1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGGCGGCGGCGG
-GGGGGCGGGGC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGGCGGCGGCGG
-GGGGGGGG---

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGGCGGCGGCGG----
NNNAAGGGGGCGGGNNN

MA0469.1_E2F3/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGGCGGCGGCGG---
NNGTGNGGGCGGGAG

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGGCGGCGGCGG-
-NGCGTGGGCGGR

PB0097.1_Zfp281_1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGGCGGCGGCGG----
-GGGGGGGGGGGGGGA

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGGCGGCGGCGG-
-GGGGGCGGGGCC