Information for motif1


Reverse Opposite:

p-value:1e-149
log p-value:-3.446e+02
Information Content per bp:1.835
Number of Target Sequences with motif213.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets94.6 +/- 52.0bp
Average Position of motif in Background130.7 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTATAGAGAA----
TTGACCGAGAATTCC

PB0021.1_Gata3_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTATAGAGAA---------
TTTTTAGAGATAAGAAATAAAG

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTATAGAGAA---
-GAAAGTGAAAGT

MA0035.3_Gata1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTATAGAGAA---
--ANAGATAAGAA

MA0037.2_GATA3/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GTATAGAGAA--
----AGATAAGA

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTATAGAGAA----
GNNACCGAGAATNNN

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GTATAGAGAA--
----AGATAASR

MA0520.1_Stat6/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTATAGAGAA--
CATTTCCTGAGAAAT

MA0051.1_IRF2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTATAGAGAA--------
GGAAAGCGAAACCAAAAC

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTATAGAGAA---
---NAGATAAGNN