Information for motif31


Reverse Opposite:

p-value:1e-14
log p-value:-3.349e+01
Information Content per bp:1.959
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets115.5 +/- 55.7bp
Average Position of motif in Background167.1 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)-1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0075.1_Prrx2/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTAATTTCAC
-TAATT----

PH0063.1_Hoxb8/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTAATTTCAC--
TTTATTAATTGCNNGN

MA0151.1_ARID3A/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTAATTTCAC
TTTAAT-----

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TTAATTTCAC----
--ACTTTCACTTTC

MA0135.1_Lhx3/Jaspar

Match Rank:5
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TTAATTTCAC
GATTAATTAATTT---

MA0132.1_Pdx1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTAATTTCAC
CTAATT----

MA0063.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTAATTTCAC
TTAATTG---

PH0041.1_Hmx1/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TTAATTTCAC--
ANNCATTAATTGCTNGN

MA0508.1_PRDM1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTAATTTCAC-----
TCACTTTCACTTTCN

PB0001.1_Arid3a_1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TTAATTTCAC---
GGGTTTAATTAAAATTC