Information for motif30


Reverse Opposite:

p-value:1e-24
log p-value:-5.639e+01
Information Content per bp:1.693
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets98.1 +/- 56.9bp
Average Position of motif in Background101.9 +/- 67.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0151.1_ARID3A/Jaspar

Match Rank:1
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:AGGCTATTTGAT
------TTTAAT

Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AGGCTATTTGAT--
----TAATTGATTA

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGGCTATTTGAT
AAGGATATNTN--

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGGCTATTTGAT-----
AATCCCTTTGATCTATC

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGCTATTTGAT-----
ATTTCCTTTGATCTATA

MA0042.1_FOXI1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGGCTATTTGAT-
-GGATGTTTGTTT

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGGCTATTTGAT-----
NNTTCCTTTGATCTANA

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGGCTATTTGAT-
---CTATTTTTGG

PB0105.1_Arid3a_2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGGCTATTTGAT------
---NNATNTGATANNNNN

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGGCTATTTGAT-----
NNTTCCTTTGATCTNNA