Information for motif9


Reverse Opposite:

p-value:1e-24
log p-value:-5.747e+01
Information Content per bp:1.855
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets93.1 +/- 49.8bp
Average Position of motif in Background122.8 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0117.1_Mafb/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCTGAGGCGGAG
GCTGACGC----

MA0162.2_EGR1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTGAGGCGGAG-
GGCGGGGGCGGGGG

MA0079.3_SP1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCTGAGGCGGAG-
--GGGGGCGGGGC

MA0516.1_SP2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCTGAGGCGGAG-
GGGNGGGGGCGGGGC

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCTGAGGCGGAG
TGCTGACTCA---

PB0010.1_Egr1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCTGAGGCGGAG
ANTGCGGGGGCGGN-

MA0496.1_MAFK/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGAGGCGGAG
AAANTGCTGACTNAG--

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCTGAGGCGGAG---
NNTNNGGGGCGGNGNGN

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCTGAGGCGGAG---
-AGGGGGCGGGGCTG

MA0495.1_MAFF/Jaspar

Match Rank:10
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------GCTGAGGCGGAG
NAAAANTGCTGACTCAGC-