p-value: | 1e-85 |
log p-value: | -1.980e+02 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 116.0 |
Percentage of Target Sequences with motif | 0.43% |
Number of Background Sequences with motif | 0.9 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 101.7 +/- 54.7bp |
Average Position of motif in Background | 53.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
PB0166.1_Sox12_2/Jaspar
Match Rank: | 1 |
Score: | 0.75 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAGGAGACAAAG---- AAACAGACAAAGGAAT |
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MA0514.1_Sox3/Jaspar
Match Rank: | 2 |
Score: | 0.70 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AAGGAGACAAAG- ---AAAACAAAGG |
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MA0515.1_Sox6/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AAGGAGACAAAG- ---AAAACAATGG |
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MA0442.1_SOX10/Jaspar
Match Rank: | 4 |
Score: | 0.66 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | AAGGAGACAAAG ------ACAAAG |
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MA0481.1_FOXP1/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AAGGAGACAAAG CAAAAGTAAACAAAG |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 6 |
Score: | 0.63 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | AAGGAGACAAAG- -----RACAAWGG |
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MA0143.3_Sox2/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | AAGGAGACAAAG- -----AACAAAGG |
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PB0071.1_Sox4_1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAGGAGACAAAG----- AGAAGAACAAAGGACTA |
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PB0015.1_Foxa2_1/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AAGGAGACAAAG-- AAAAAGTAAACAAAGAC |
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PB0168.1_Sox14_2/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAGGAGACAAAG---- -CTCACACAATGGCGC |
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