Information for motif53


Reverse Opposite:

p-value:1e-36
log p-value:-8.509e+01
Information Content per bp:1.530
Number of Target Sequences with motif151.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets102.8 +/- 56.9bp
Average Position of motif in Background91.2 +/- 39.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--ATTTGTAC----
TTATTAGTACATAN

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATTTGTAC-
CCATTGTTNY

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------ATTTGTAC
NNNNNNCTTTTATAN

MA0108.2_TBP/Jaspar

Match Rank:4
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------ATTTGTAC
NNNNNNCTTTTATAN

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATTTGTAC--
ATTTGCATAT

MA0507.1_POU2F2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATTTGTAC--
TTCATTTGCATAT

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATTTGTAC--
ATTTGCATAA

MA0514.1_Sox3/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATTTGTAC-
CCTTTGTTTT

MA0442.1_SOX10/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATTTGTAC
CTTTGT--

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----ATTTGTAC----
TNNTCCTTTGTTCTNNT