Information for motif41


Reverse Opposite:

p-value:1e-17
log p-value:-3.953e+01
Information Content per bp:1.530
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets104.1 +/- 56.0bp
Average Position of motif in Background111.4 +/- 70.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0194.1_Zbtb12_2/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TCAGAACTCGAG
TATCATTAGAACGCT--

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCAGAACTCGAG
--RSCACTYRAG

PB0115.1_Ehf_2/Jaspar

Match Rank:3
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TCAGAACTCGAG
AAGATCGGAANTNNNA

PH0111.1_Nkx2-2/Jaspar

Match Rank:4
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TCAGAACTCGAG----
ATAACCACTTGAAAATT

PH0112.1_Nkx2-3/Jaspar

Match Rank:5
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TCAGAACTCGAG-
CNTTAAGTACTTAANG

MA0009.1_T/Jaspar

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TCAGAACTCGAG
TTCACACCTAG--

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---TCAGAACTCGAG
ATGTCACAACAACAC

PH0116.1_Nkx2-9/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---TCAGAACTCGAG--
TTTTAAGTACTTAAATT

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----TCAGAACTCGAG
TGAGTCAGCA------

POL002.1_INR/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:TCAGAACTCGAG
TCAGTCTT----