Information for motif33


Reverse Opposite:

p-value:1e-20
log p-value:-4.744e+01
Information Content per bp:1.958
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets97.9 +/- 53.4bp
Average Position of motif in Background90.5 +/- 49.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CAACAGCAAG-
-AACAGGAAGT

MA0133.1_BRCA1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CAACAGCAAG
ACAACAC----

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAACAGCAAG
CCAACTGCCA-

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAACAGCAAG--
--ACAGGAAGTG

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAACAGCAAG-
-NACAGGAAAT

MA0474.1_Erg/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAACAGCAAG---
--ACAGGAAGTGG

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAACAGCAAG
-CACAGN---

MA0098.2_Ets1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAACAGCAAG----
NNNACAGGAAGTGGN

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAACAGCAAG
NHAACBGYYV-

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAACAGCAAG-
-AACCGGAAGT