Information for motif43


Reverse Opposite:

p-value:1e-11
log p-value:-2.710e+01
Information Content per bp:1.925
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets92.0 +/- 52.3bp
Average Position of motif in Background120.1 +/- 49.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--TAGGCGTG-----
CAAAGGCGTGGCCAG

MA0009.1_T/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TAGGCGTG--
CTAGGTGTGAA

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TAGGCGTG--
--GGCGCGCT

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TAGGCGTG
--TGCGTG

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TAGGCGTG
CNAGGCCT-

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TAGGCGTG
CTAGGCCT-

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TAGGCGTG--
DGGGYGKGGC

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TAGGCGTG-----
NAGANTGGCGGGGNGNA

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TAGGCGTG
NGCGTGGGCGGR

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TAGGCGTG-----
NNAGGGGCGGGGTNNA