Information for motif1


Reverse Opposite:

p-value:1e-44
log p-value:-1.023e+02
Information Content per bp:1.801
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets96.7 +/- 59.0bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0056.1_MZF1_1-4/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CGCGTCCCCG
----TCCCCA

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGCGTCCCCG
GCACGTACCC-

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CGCGTCCCCG-
GAGCCCTTGTCCCTAA

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CGCGTCCCCG-
CGCGCCGGGTCACGTA

PB0094.1_Zfp128_1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CGCGTCCCCG--
TCTTTGGCGTACCCTAA

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGCGTCCCCG-
-CTGTTCCTGG

PB0128.1_Gcm1_2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGCGTCCCCG-------
NTCNTCCCCTATNNGNN

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGCGTCCCCG----
TCCGCCCCCGCATT

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CGCGTCCCCG-
TGGCGCGCGCGCCTGA

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CGCGTCCCCG----
GGTCCCGCCCCCTTCTC