Information for motif25


Reverse Opposite:

p-value:1e-28
log p-value:-6.601e+01
Information Content per bp:1.848
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets88.9 +/- 55.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATGCCGTTTCTC-
CCTTGCAATTTTTNN

T1ISRE(IRF)/Ifnb-Exp/Homer

Match Rank:2
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATGCCGTTTCTC
ACTTTCGTTTCT-

MA0065.2_PPARG::RXRA/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ATGCCGTTTCTC----
-TGACCTTTGCCCTAN

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATGCCGTTTCTC
BRRCVGTTDN--

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:ATGCCGTTTCTC-
-TGACCTTTNCNT

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ATGCCGTTTCTC-
NNGCACCTTTCTCC

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:ATGCCGTTTCTC------
---AGTATTCTCGGTTGC

PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:ATGCCGTTTCTC---
-TGACCTTTGCCCCA

RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ATGCCGTTTCTC---
-TGACCTTTGCCCTA

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:ATGCCGTTTCTC------
---NNAATTCTCGNTNAN