Information for motif34


Reverse Opposite:

p-value:1e-13
log p-value:-3.019e+01
Information Content per bp:1.970
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets99.6 +/- 53.0bp
Average Position of motif in Background112.3 +/- 54.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0194.1_Zbtb12_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGTCCTAAGG---
AGNGTTCTAATGANN

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGTCCTAAGG---
NTGCCCANNGGTNA

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGTCCTAAGG-
ATGCCCTGAGGC

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------GGTCCTAAGG------
NTNNNNNGTTGCTANGGNNCANA

MA0003.2_TFAP2A/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGTCCTAAGG-----
TGCCCTGAGGCANTN

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGTCCTAAGG--
NNCGTTGCTATGGNN

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGTCCTAAGG-
WTGSCCTSAGGS

PH0065.1_Hoxc10/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGTCCTAAGG---
TAAAGTCGTAAAACGT

MA0109.1_Hltf/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGTCCTAAGG--
--NNATAAGGNN

MA0163.1_PLAG1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGTCCTAAGG---
GGGGCCCAAGGGGG