Information for motif22


Reverse Opposite:

p-value:1e-18
log p-value:-4.185e+01
Information Content per bp:1.553
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets114.1 +/- 56.4bp
Average Position of motif in Background93.2 +/- 55.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0146.2_Zfx/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGCCGCGGAC--
CAGGCCNNGGCCNN

MA0117.1_Mafb/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGCCGCGGAC--
----GCTGACGC

MA0131.1_HINFP/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGCCGCGGAC----
----GCGGACGTTN

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGCCGCGGAC-----
-GCCGCGCAGTGCGT

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGCCGCGGAC---
---TGCTGACTCA

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GGCCGCGGAC--
NNNAAGGGGGCGGGNNN

MA0155.1_INSM1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGCCGCGGAC-
CGCCCCCTGACA

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGCCGCGGAC---
ANTGCCTGAGGCAAN

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGCCGCGGAC
CTAGGCCT-----

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGCCGCGGAC
NNAGCAGCTGCT