Information for motif10


Reverse Opposite:

p-value:1e-35
log p-value:-8.143e+01
Information Content per bp:1.701
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets94.6 +/- 52.4bp
Average Position of motif in Background34.5 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAAAGTATGCTT------
-AAAATATGCATAATAAA

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAAAGTATGCTT
-AAGATATCCTT

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GAAAGTATGCTT
GAAAGTGAAAGT------

NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GAAAGTATGCTT---
NANTGGAAAAANTGAGTCAN

MA0124.1_NKX3-1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAAAGTATGCTT
-TAAGTAT----

MA0041.1_Foxd3/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAAAGTATGCTT
GAATGTTTGTTT

MA0508.1_PRDM1/Jaspar

Match Rank:7
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------GAAAGTATGCTT
AGAAAGTGAAAGTGA----

PB0176.1_Sox5_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GAAAGTATGCTT
NNCTNAATTATGANN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GAAAGTATGCTT
ACTGAAACCA-----

MA0164.1_Nr2e3/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GAAAGTATGCTT-
------AAGCTTG