Information for motif2


Reverse Opposite:

p-value:1e-146
log p-value:-3.380e+02
Information Content per bp:1.844
Number of Target Sequences with motif166.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets95.8 +/- 53.6bp
Average Position of motif in Background90.5 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGCAGGTY
BGCACGTA

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGCAGGTY-
-GCACGTNC

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGCAGGTY---
-GCACGTACCC

MA0131.1_HINFP/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGGTY-
GCGGACGTTN

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGCAGGTY--
NNCAGGTGNN

MA0004.1_Arnt/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGCAGGTY
--CACGTG

bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGCAGGTY---
-KCACGTGMCN

MA0464.1_Bhlhe40/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGGTY--
NTGCACGTGAG

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGCAGGTY------
ATCCACAGGTGCGAAAA

MA0103.2_ZEB1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGCAGGTY---
--CAGGTGAGG