Information for motif22


Reverse Opposite:

p-value:1e-66
log p-value:-1.524e+02
Information Content per bp:1.540
Number of Target Sequences with motif98.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets98.4 +/- 57.5bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0511.1_RUNX2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACACCAGATACT--
CAAACCACAAACCCC

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACACCAGATACT
ATGCCAGACN--

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACACCAGATACT---
CAAATCCAGACATCACA

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACACCAGATACT
NWAACCACADNN-

MA0029.1_Mecom/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACACCAGATACT-
AAGATAAGATAACA

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ACACCAGATACT-
---CCAGACRSVB

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ACACCAGATACT
---CCAGACAG-

MA0002.2_RUNX1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACACCAGATACT
AAACCACAGAN-

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ACACCAGATACT
AAACCACAGC--

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACACCAGATACT--
--AACAGATGGTCN