Information for motif24


Reverse Opposite:

p-value:1e-63
log p-value:-1.468e+02
Information Content per bp:1.940
Number of Target Sequences with motif251.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets105.1 +/- 55.6bp
Average Position of motif in Background106.4 +/- 54.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----AGGTGTCC----
GCGGAGGTGTCGCCTC

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AGGTGTCC
AGGTGTCA

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGTCC-----
TNNNNGGTGTCATNTNT

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGTCC
NNCAGGTGNN-

PB0047.1_Myf6_1/Jaspar

Match Rank:5
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------AGGTGTCC-
GAAGAACAGGTGTCCG

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGGTGTCC--
AGGTGTGAAM

CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGGTGTCC
CACGTGDC-

MA0093.2_USF1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGGTGTCC
GCCACGTGACC

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AGGTGTCC----
NTNNNAGGAGTCTCNTN

BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGGTGTCC
CACGTGNC-