Information for motif26


Reverse Opposite:

p-value:1e-63
log p-value:-1.451e+02
Information Content per bp:1.953
Number of Target Sequences with motif95.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets108.0 +/- 52.5bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CCACTGGGTC-
GTAGGTCACTGGGTCA

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCACTGGGTC-----
CGCGCCGGGTCACGTA

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCACTGGGTC-
TCCCCTGGGGAC

MA0059.1_MYC::MAX/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCACTGGGTC
ACCACGTGCTC

MA0130.1_ZNF354C/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCACTGGGTC
ATCCAC------

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCACTGGGTC
AGCCAATCGG--

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CCACTGGGTC-
-----AGGTCA

n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCACTGGGTC
CCACGTGGNN

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCACTGGGTC-----
AGAGCGGGGTCAAGTA

MA0122.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCACTGGGTC
NCCACTTAN--