Information for motif30


Reverse Opposite:

p-value:1e-60
log p-value:-1.397e+02
Information Content per bp:1.530
Number of Target Sequences with motif123.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets93.2 +/- 54.7bp
Average Position of motif in Background98.2 +/- 89.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----TGACCCGCCT--
NNNNTGACCCGGCGCG

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----TGACCCGCCT--
NNCNTGACCCCGCTCT

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGACCCGCCT---
NNGGCCACGCCTTTN

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGACCCGCCT
TGACCT----

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TGACCCGCCT------
-GCCCCGCCCCCTCCC

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGACCCGCCT-----
TACGCCCCGCCACTCTG

PB0025.1_Glis2_1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TGACCCGCCT---
TATCGACCCCCCACAG

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGACCCGCCT----
TCGTACCCGCATCATT

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGACCCGCCT--
GGCCCCGCCCCC

MA0079.3_SP1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGACCCGCCT--
-GCCCCGCCCCC