Information for motif33


Reverse Opposite:

p-value:1e-57
log p-value:-1.317e+02
Information Content per bp:1.915
Number of Target Sequences with motif256.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets94.7 +/- 55.4bp
Average Position of motif in Background84.7 +/- 60.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0161.1_Rxra_2/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----GTAGGTTG----
TCGCGAAGGTTGTACT

POL007.1_BREd/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GTAGGTTG
GTTTGTT-

MA0032.1_FOXC1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GTAGGTTG
GGTAAGTA-----

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTAGGTTG
CAGGTAAGTAT

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTAGGTTG
GGCVGTTR

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTAGGTTG-----
CTACTAGGATGTNNTN

MA0133.1_BRCA1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTAGGTTG-
--GTGTTGN

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTAGGTTG
TGTCGGTT-

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTAGGTTG-------
NGTAGGTTGGCATNNN

MA0072.1_RORA_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GTAGGTTG-
TATAAGTAGGTCAA