Information for motif34


Reverse Opposite:

p-value:1e-56
log p-value:-1.299e+02
Information Content per bp:1.530
Number of Target Sequences with motif118.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets99.0 +/- 56.7bp
Average Position of motif in Background114.3 +/- 51.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACCCGTCAGG
--ACGTCA--

PH0140.1_Pknox1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACCCGTCAGG--
AAAGACCTGTCAATCC

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACCCGTCAGG
--CTGTCTGG

PH0104.1_Meis2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACCCGTCAGG--
AAAGACCTGTCAATAC

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACCCGTCAGG
VBSYGTCTGG

MA0498.1_Meis1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACCCGTCAGG-----
AGCTGTCACTCACCT

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACCCGTCAGG--
AATTACCTGTCAATAC

PH0102.1_Meis1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACCCGTCAGG--
AACGAGCTGTCAATAC

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ACCCGTCAGG--
AAGCACCTGTCAATAT

MA0067.1_Pax2/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ACCCGTCAGG-
---AGTCACGC