Information for motif37


Reverse Opposite:

p-value:1e-54
log p-value:-1.260e+02
Information Content per bp:1.530
Number of Target Sequences with motif116.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets101.2 +/- 58.1bp
Average Position of motif in Background82.9 +/- 41.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0090.1_Zbtb12_1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCTCTCGAAC-----
NNGATCTAGAACCTNNN

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCTCTCGAAC--
ACCACTCTCGGTCAC

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCTCTCGAAC
AASCACTCAA--

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCTCTCGAAC--
AGTATTCTCGGTTGC

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCTCTCGAAC
RSCACTYRAG-

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTCGAAC--
NNAATTCTCGNTNAN

PH0171.1_Nkx2-1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCTCTCGAAC--
TAAGCCACTTGAAATT

PH0111.1_Nkx2-2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCTCTCGAAC---
ATAACCACTTGAAAATT

PH0113.1_Nkx2-4/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCTCTCGAAC--
TAAGCCACTTGAAATT

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCTCTCGAAC
AGCCACTCAAG-