Information for motif38


Reverse Opposite:

p-value:1e-54
log p-value:-1.244e+02
Information Content per bp:1.841
Number of Target Sequences with motif139.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets97.5 +/- 53.8bp
Average Position of motif in Background123.4 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0045.1_Myb_1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TATACCGG-------
NNNNTAACGGTTNNNAN

MA0033.1_FOXL1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TATACCGG
TATACATA----

PB0046.1_Mybl1_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TATACCGG-------
NNANTAACGGTTNNNAN

PB0163.1_Six6_2/Jaspar

Match Rank:4
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------TATACCGG--
ANNNGGATATATCCNNN

MA0108.2_TBP/Jaspar

Match Rank:5
Score:0.60
Offset:-10
Orientation:reverse strand
Alignment:----------TATACCGG
NNNNNNCTTTTATAN---

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.60
Offset:-10
Orientation:reverse strand
Alignment:----------TATACCGG
NNNNNNCTTTTATAN---

PB0184.1_Tbp_2/Jaspar

Match Rank:7
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------TATACCGG
GNNCGCTTAAATCGG

PB0020.1_Gabpa_1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TATACCGG--------
CAATACCGGAAGTGTAA

PB0128.1_Gcm1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TATACCGG-----
TGCGCATAGGGGAGGAG

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TATACCGG---
-NHAACBGYYV