Information for motif4


Reverse Opposite:

p-value:1e-91
log p-value:-2.111e+02
Information Content per bp:1.530
Number of Target Sequences with motif121.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets101.8 +/- 53.7bp
Average Position of motif in Background174.5 +/- 0.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CTGTCGACAG-
GGTGYTGACAGS

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CTGTCGACAG-
-----CACAGN

PH0104.1_Meis2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTGTCGACAG------
NTATTGACAGGTNNTN

PH0170.1_Tgif2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTGTCGACAG------
GTATTGACAGCTNNTT

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGTCGACAG
CTGTTTAC--

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CTGTCGACAG
AATTACCTGTCAATAC

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGTCGACAG------
NNATTGACAGGTGCTT

PH0102.1_Meis1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGTCGACAG------
NTATTGACAGCTNNTT

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGTCGACAG-
CNTGTTTACATA

MA0480.1_Foxo1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGTCGACAG--
-TGTAAACAGGA