Information for motif47


Reverse Opposite:

p-value:1e-45
log p-value:-1.055e+02
Information Content per bp:1.530
Number of Target Sequences with motif105.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets104.6 +/- 53.6bp
Average Position of motif in Background77.2 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0483.1_Gfi1b/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATGCTTTGCTTT
-TGCTGTGATTT

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATGCTTTGCTTT---
NNNTCCTTTGTTCTNNN

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATGCTTTGCTTT---
ATTTCCTTTGATCTATA

PB0082.1_Tcf3_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATGCTTTGCTTT---
NNTTCCTTTGATCTANA

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ATGCTTTGCTTT
--CCTTTGATGT

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATGCTTTGCTTT---
AATCCCTTTGATCTATC

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATGCTTTGCTTT---
TNNTCCTTTGTTCTNNT

MA0514.1_Sox3/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ATGCTTTGCTTT
--CCTTTGTTTT

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ATGCTTTGCTTT---
NNTTCCTTTGATCTNNA

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ATGCTTTGCTTT-
NNCTTTGTTTTGNTNNN