| p-value: | 1e-45 |
| log p-value: | -1.055e+02 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 105.0 |
| Percentage of Target Sequences with motif | 0.39% |
| Number of Background Sequences with motif | 2.9 |
| Percentage of Background Sequences with motif | 0.09% |
| Average Position of motif in Targets | 93.0 +/- 55.3bp |
| Average Position of motif in Background | 98.3 +/- 42.7bp |
| Strand Bias (log2 ratio + to - strand density) | 0.5 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PB0205.1_Zic1_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.58
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CTGCTCTGTGAG
TNTCCTGCTGTGNNG- |
|
|
|
Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 2 |
| Score: | 0.56
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CTGCTCTGTGAG
CCCCCTGCTGTG---- |
|
|
|
MA0512.1_Rxra/Jaspar
| Match Rank: | 3 |
| Score: | 0.56
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CTGCTCTGTGAG
NCTGACCTTTG-- |
|
|
|
POL009.1_DCE_S_II/Jaspar
| Match Rank: | 4 |
| Score: | 0.56
| | Offset: | 4
| | Orientation: | forward strand |
| Alignment: | CTGCTCTGTGAG
----GCTGTG-- |
|
|
|
PB0206.1_Zic2_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.55
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CTGCTCTGTGAG
TCNCCTGCTGNGNNN- |
|
|
|
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 6 |
| Score: | 0.54
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CTGCTCTGTGAG
CTGACCTTTG-- |
|
|
|
PB0207.1_Zic3_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.53
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CTGCTCTGTGAG
NNTCCTGCTGTGNNN- |
|
|
|
MA0442.1_SOX10/Jaspar
| Match Rank: | 8 |
| Score: | 0.52
| | Offset: | 3
| | Orientation: | forward strand |
| Alignment: | CTGCTCTGTGAG
---CTTTGT--- |
|
|
|
POL013.1_MED-1/Jaspar
| Match Rank: | 9 |
| Score: | 0.52
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | CTGCTCTGTGAG
--GCTCCG---- |
|
|
|
MA0591.1_Bach1::Mafk/Jaspar
| Match Rank: | 10 |
| Score: | 0.52
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CTGCTCTGTGAG---
NTGCTGAGTCATCCN |
|
|
|
