Information for motif50


Reverse Opposite:

p-value:1e-44
log p-value:-1.018e+02
Information Content per bp:1.530
Number of Target Sequences with motif103.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets101.2 +/- 56.0bp
Average Position of motif in Background132.6 +/- 45.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTTGTTTTC--
NNNTGTTGTTGTTNG

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGTGTTGTTTTC----
NNTTTTGTTTTGATNT

MA0480.1_Foxo1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGTGTTGTTTTC-
--TCCTGTTTACA

MA0133.1_BRCA1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGTGTTGTTTTC
-GTGTTGN----

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTTGTTTTC-
NNGTANTGTTTTNC

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTTGTTTTC
NCNTTTGTTATTTNN

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGTGTTGTTTTC----
-GTNTTGTTGTGANNT

MA0157.1_FOXO3/Jaspar

Match Rank:8
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TGTGTTGTTTTC-
-----TGTTTACA

MA0511.1_RUNX2/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TGTGTTGTTTTC
GGGGTTTGTGGTTTG-

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGTGTTGTTTTC
NNTGTGGTTT--