Information for motif54


Reverse Opposite:

p-value:1e-35
log p-value:-8.148e+01
Information Content per bp:1.530
Number of Target Sequences with motif112.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets89.3 +/- 56.8bp
Average Position of motif in Background82.6 +/- 68.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTATCCTC
AAGATATCCTT

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GTATCCTC----
NTNNCGTATCCAAGTNN

PB0156.1_Plagl1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GTATCCTC----
NNNNGGTACCCCCCANN

MA0056.1_MZF1_1-4/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTATCCTC-
---TCCCCA

ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GTATCCTC
CAGCTGTTTCCT-

MA0136.1_ELF5/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTATCCTC
TACTTCCTT

PH0161.1_Six1/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GTATCCTC---
GATGGGGTATCATTTTT

MA0032.1_FOXC1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GTATCCTC
GGTAAGTA-----

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTATCCTC----
GATAACATCCTAGTAG

PH0166.1_Six6_2/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GTATCCTC---
AATAGGGTATCAATATT