Information for motif55


Reverse Opposite:

p-value:1e-33
log p-value:-7.790e+01
Information Content per bp:1.945
Number of Target Sequences with motif2268.0
Percentage of Target Sequences with motif8.39%
Number of Background Sequences with motif204.5
Percentage of Background Sequences with motif6.50%
Average Position of motif in Targets100.4 +/- 54.3bp
Average Position of motif in Background104.6 +/- 56.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.90
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAA----
GTTAAAAAAAAAAATTA

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.87
Offset:-6
Orientation:forward strand
Alignment:------AAAAAAAA
TACTGGAAAAAAAA

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.84
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAA----
GTTCAAAAAAAAAATTC

PB0186.1_Tcf3_2/Jaspar

Match Rank:4
Score:0.79
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAA--
AGCCGAAAAAAAAAT

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAAA----
AACAAACAACAAGAG

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAA--
AAATAAGAAAAAAC

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAA---
CTACCAATAAAATTCT

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAA---
AACCCAATAAAATTCG

MA0041.1_Foxd3/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AAAAAAAA-----
-AAACAAACATTC

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAA---
ATATCAAAACAAAACA