Information for motif6


Reverse Opposite:

p-value:1e-88
log p-value:-2.032e+02
Information Content per bp:1.943
Number of Target Sequences with motif118.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets111.4 +/- 51.9bp
Average Position of motif in Background176.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AAAACGCA---
GAAAAAATTGCAAGG

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAAACGCA
--CACGCA

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAAACGCA--
AAACCACANN

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAAACGCA-
NAAACCACAG

PH0044.1_Homez/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AAAACGCA-----
NNTAAAAACGATGTTNT

PB0106.1_Arid5a_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AAAACGCA----
CATACAATACGAAATAA

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAAACGCA---
GAAASYGAAASY

MA0002.2_RUNX1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAAACGCA---
AAACCACAGAN

MA0483.1_Gfi1b/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAAACGCA---
AAATCACAGCA

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAAACGCA--
AAACCACAGC