Information for motif10


Reverse Opposite:

p-value:1e-13
log p-value:-3.013e+01
Information Content per bp:1.843
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif30.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets105.0 +/- 48.6bp
Average Position of motif in Background107.9 +/- 53.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0122.1_Nkx3-2/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CGTCCACTTT-
--NCCACTTAN

MA0130.1_ZNF354C/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CGTCCACTTT
-ATCCAC---

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGTCCACTTT----
CCTTGCAATTTTTNN

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGTCCACTTT-
ACTTTCACTTTC

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGTCCACTTT-----
CTTAACCACTTAAGGAT

PH0004.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGTCCACTTT-----
CATAACCACTTAACAAC

MA0508.1_PRDM1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGTCCACTTT--
TCACTTTCACTTTCN

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGTCCACTTT-
RSTTTCRSTTTC

MA0050.2_IRF1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CGTCCACTTT------
TTTTACTTTCACTTTCACTTT

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGTCCACTTT-----
TAAGCCACTTGAATTT