Information for motif11


Reverse Opposite:

p-value:1e-12
log p-value:-2.959e+01
Information Content per bp:1.895
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets81.9 +/- 42.9bp
Average Position of motif in Background96.1 +/- 37.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCAGCARACCAG
-CAGCC------

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCAGCARACCAG-----
GANGTTAACTAGTTTNN

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCAGCARACCAG---
CGAAGCACACAAAATA

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CCAGCARACCAG---
-----ATGCCAGACN

MA0103.2_ZEB1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCAGCARACCAG
---CCTCACCTG

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CCAGCARACCAG--
----NAAACCACAG

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCAGCARACCAG
NAHCAGCTGD----

POL001.1_MTE/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCAGCARACCAG----
TTTCGAGCGGAACGGTCGC

MA0461.1_Atoh1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCARACCAG
GCCATCTG-----

MA0511.1_RUNX2/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CCAGCARACCAG-------
----CAAACCACAAACCCC