Information for motif13


Reverse Opposite:

p-value:1e-12
log p-value:-2.959e+01
Information Content per bp:1.863
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets94.8 +/- 58.0bp
Average Position of motif in Background135.1 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0488.1_JUN/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:GGATGTCATCAT---
--ATGACATCATCNN

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GGATGTCATCAT
NGATGACGTCAT

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:3
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GGATGTCATCAT----
-NATGACATCATCNNN

PH0014.1_Cphx/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GGATGTCATCAT
NTTGATTNNATCAN

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:5
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGATGTCATCAT
NGATGACGTCAT

GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------GGATGTCATCAT--
NNNNNBAGATAWYATCTVHN

PB0038.1_Jundm2_1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGATGTCATCAT---
CCGATGACGTCATCGT

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGATGTCATCAT
--ATTGCATCAT

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGATGTCATCAT-
-SCTGTCARCACC

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGATGTCATCAT
--ATTGCATCAK