Information for motif16


Reverse Opposite:

p-value:1e-12
log p-value:-2.787e+01
Information Content per bp:1.866
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets75.8 +/- 48.3bp
Average Position of motif in Background109.3 +/- 58.4bp
Strand Bias (log2 ratio + to - strand density)-2.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCACCCATTCTC----
TGTTCCCATTGTGTACT

MA0095.2_YY1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCACCCATTCTC
GCNGCCATCTTG

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCACCCATTCTC-
NNGCACCTTTCTCC

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCACCCATTCTC-
---NCCATTGTTC

MA0143.3_Sox2/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCACCCATTCTC
----CCTTTGTT

MA0078.1_Sox17/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCACCCATTCTC
---CTCATTGTC

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCACCCATTCTC
----CCWTTGTY

MA0515.1_Sox6/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCACCCATTCTC--
----CCATTGTTTT

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCACCCATTCTC
AGCGGCACACACGCAA

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCACCCATTCTC
-CRCCCACGCA-