Information for motif18


Reverse Opposite:

p-value:1e-11
log p-value:-2.680e+01
Information Content per bp:1.723
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif142.5
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets104.1 +/- 55.7bp
Average Position of motif in Background95.5 +/- 51.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTTTTGCCTCG
NNACTTGCCTT-

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTTGCCTCG-
ANATTTTTGCAANTN

MA0152.1_NFATC2/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTTTTTGCCTCG
---TTTTCCA--

MA0514.1_Sox3/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTTTTTGCCTCG
CCTTTGTTTT---

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTTTTTGCCTCG
CTGTTTAC----

MA0442.1_SOX10/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTTTTTGCCTCG
CTTTGT------

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTTGCCTCG-
TTTTTTTTCNNGTN

MA0465.1_CDX2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTTTTTGCCTCG
TTTTATGGCTN-

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTTTTTGCCTCG
NNNNTTGTGTGCTTNN

MA0065.2_PPARG::RXRA/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTTGCCTCG
TGACCTTTGCCCTAN