Information for motif19


Reverse Opposite:

p-value:1e-11
log p-value:-2.613e+01
Information Content per bp:1.898
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets133.3 +/- 31.8bp
Average Position of motif in Background54.5 +/- 6.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATGGAGCCCCGC
-CGGAGC-----

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ATGGAGCCCCGC----
----GGCCCCGCCCCC

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATGGAGCCCCGC
---CAGCC----

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATGGAGCCCCGC---
NNNNTGAGCACTGTNNG

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ATGGAGCCCCGC-----
---NAGCCCCGCCCCCN

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ATGGAGCCCCGC
-GGGAGGACNG-

MA0516.1_SP2/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:ATGGAGCCCCGC--------
-----GCCCCGCCCCCTCCC

MA0599.1_KLF5/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:ATGGAGCCCCGC---
-----GCCCCGCCCC

MA0079.3_SP1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ATGGAGCCCCGC----
-----GCCCCGCCCCC

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ATGGAGCCCCGC-
TTGGGGGCGCCCCTAG