Information for motif2


Reverse Opposite:

p-value:1e-15
log p-value:-3.672e+01
Information Content per bp:1.883
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets93.0 +/- 59.1bp
Average Position of motif in Background81.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0009.1_E2F3_1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGCTCGCCCTGT-
ANCGCGCGCCCTTNN

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGCTCGCCCTGT-
NTCGCGCGCCTTNNN

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TGCTCGCCCTGT-
-------GCTGTG

PB0107.1_Ascl2_2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGCTCGCCCTGT-
CTATCCCCGCCCTATT

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGCTCGCCCTGT
CNGTCCTCCC-----

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCTCGCCCTGT
NGCTN-------

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCTCGCCCTGT
GCCMCRCCCH--

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------TGCTCGCCCTGT
CGAACAGTGCTCACTAT--

MA0599.1_KLF5/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TGCTCGCCCTGT
GCCCCGCCCC--

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGCTCGCCCTGT
-GCTCCG-----