Information for motif20


Reverse Opposite:

p-value:1e-11
log p-value:-2.594e+01
Information Content per bp:1.900
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets113.8 +/- 30.5bp
Average Position of motif in Background114.6 +/- 58.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0152.1_NFATC2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TATTCCCTCG
TTTTCCA---

PH0137.1_Pitx1/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TATTCCCTCG--
NTTGTTAATCCCTCTNN

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TATTCCCTCG
GCATTCCAGN-

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TATTCCCTCG
HTTTCCCASG

PH0123.1_Obox3/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TATTCCCTCG--
ATAGTTAATCCCCCNNA

PH0125.1_Obox5_2/Jaspar

Match Rank:6
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------TATTCCCTCG-
GATAATTAATCCCTCTT

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TATTCCCTCG
RCATTCCWGG-

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TATTCCCTCG
ATTTTCCATT-

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TATTCCCTCG
GCTAATCC----

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TATTCCCTCG
NYTTCCCGCC