Information for motif21


Reverse Opposite:

p-value:1e-10
log p-value:-2.461e+01
Information Content per bp:1.766
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif217.0
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets102.6 +/- 56.6bp
Average Position of motif in Background98.3 +/- 54.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0029.1_Mecom/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----ATCTGATCTG
TNTTATCTTATCTT

MA0037.2_GATA3/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:ATCTGATCTG
-TCTTATCT-

MA0482.1_Gata4/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:ATCTGATCTG--
-TCTTATCTCCC

MA0036.2_GATA2/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ATCTGATCTG-
AGATTCTTATCTGT

MA0035.3_Gata1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATCTGATCTG-
TTCTTATCTGT

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATCTGATCTG
NNCTTATCTN

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATCTGATCTG
NCCTTATCTG

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:8
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ATCTGATCTG-
-YCTTATCWVN

PB0021.1_Gata3_1/Jaspar

Match Rank:9
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------ATCTGATCTG------
NNTNANTTCTTATCTCTANANN

PB0023.1_Gata6_1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ATCTGATCTG----
NNANTCTTATCTNNNNN