Information for motif22


Reverse Opposite:

p-value:1e-10
log p-value:-2.368e+01
Information Content per bp:1.908
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets124.7 +/- 57.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0164.1_Nr2e3/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGAACCTTAACG
--AAGCTTG---

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------AGAACCTTAACG
TATCATTAGAACGCT----

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------AGAACCTTAACG
NNGATCTAGAACCTNNN--

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----AGAACCTTAACG----
TTCTAGAANNTTCCAGAANN

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGAACCTTAACG
AAGATATCCTT----

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGAACCTTAACG--
TAGAANVTTCTAGAA

MA0486.1_HSF1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGAACCTTAACG---
AGAANNTTCTAGAAN

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AGAACCTTAACG-
NNNNATGACCTTGANTN

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGAACCTTAACG
--AACCGANA--

PB0161.1_Rxra_2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AGAACCTTAACG-
NNNNCAACCTTCGNGA