Information for motif26


Reverse Opposite:

p-value:1e-9
log p-value:-2.216e+01
Information Content per bp:1.550
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif37.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets107.8 +/- 46.0bp
Average Position of motif in Background118.5 +/- 50.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CAGAATTCTGGG----
-RGSMTBCTGGGAAAT

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAGAATTCTGGG---
-AAAATTGTTATGAA

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGAATTCTGGG---
GGAAAAATTGTTAGGAA

MA0088.1_znf143/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGAATTCTGGG-----
GCAAGGCATGATGGGAAATC

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGAATTCTGGG----
-NNAATTCTCGNTNAN

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CAGAATTCTGGG----
-----TTCTTGGAAAN

MA0594.1_Hoxa9/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGAATTCTGGG
-TGATTTATGGC

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGAATTCTGGG----
-AGTATTCTCGGTTGC

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAGAATTCTGGG-
-TGATTTATGGCC

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAGAATTCTGGG-
-TGATTTATGGCC