Information for motif27


Reverse Opposite:

p-value:1e-9
log p-value:-2.200e+01
Information Content per bp:1.824
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif173.9
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets98.4 +/- 54.1bp
Average Position of motif in Background97.8 +/- 52.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGTATACACA-----
NSTGTTTRCWCAGBNNN

MA0479.1_FOXH1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGTATACACA
TCCAATCCACA

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGTATACACA----
AAAGTAAACAAAAATT

MA0157.1_FOXO3/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGTATACACA
TGTAAACA--

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGTATACACA
CNTGTTTACATA

MA0593.1_FOXP2/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGTATACACA
AAGTAAACAAA

MA0481.1_FOXP1/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TGTATACACA-
CAAAAGTAAACAAAG

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGTATACACA-
NDGTAAACARRN

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGTATACACA--
SSAATCCACANN

MA0040.1_Foxq1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGTATACACA---
--AATAAACAATN