Information for motif28


Reverse Opposite:

p-value:1e-9
log p-value:-2.170e+01
Information Content per bp:1.649
Number of Target Sequences with motif216.0
Percentage of Target Sequences with motif6.85%
Number of Background Sequences with motif1194.4
Percentage of Background Sequences with motif4.41%
Average Position of motif in Targets103.2 +/- 58.0bp
Average Position of motif in Background97.5 +/- 55.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGAGGTAGAG
TGACGT----

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGAGGTAGAG
AGAGGAAGTG

MA0080.3_Spi1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGAGGTAGAG-
AAAAAGAGGAAGTGA

MA0598.1_EHF/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGAGGTAGAG
-CAGGAAGG-

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGAGGTAGAG---
NNNTTAGGTAGCNTNT

MA0018.2_CREB1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGAGGTAGAG
TGACGTCA--

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGAGGTAGAG
NNHTGTGGTTWN-

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------TGAGGTAGAG
AAACATAATGAGGTTGC-

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGAGGTAGAG
NNTGTGGTTT--

MA0002.2_RUNX1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TGAGGTAGAG
GTCTGTGGTTT--