Information for motif29


Reverse Opposite:

p-value:1e-8
log p-value:-1.958e+01
Information Content per bp:1.879
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets91.3 +/- 54.3bp
Average Position of motif in Background124.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0506.1_NRF1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CGCCGGCGCG
GCGCCTGCGCA

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CGCCGGCGCG
CTGCGCATGCGC-

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CGCCGGCGCG--
----GGCGCGCT

PB0010.1_Egr1_1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGCCGGCGCG--
TCCGCCCCCGCATT

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGCCGGCGCG
YCCGCCCACGCN

NRF1/Promoter/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGCCGGCGCG-
GCGCATGCGCAC

MA0162.2_EGR1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CGCCGGCGCG
CCCCCGCCCCCGCC

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGCCGGCGCG
CRCCCACGCA

MA0472.1_EGR2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGCCGGCGCG-
CCCCCGCCCACGCAC

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CGCCGGCGCG----
----GGCGGGAAAH