Information for motif30


Reverse Opposite:

p-value:1e-8
log p-value:-1.958e+01
Information Content per bp:1.507
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets108.5 +/- 46.4bp
Average Position of motif in Background110.3 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGCCGAACA
NNANTGGTGGTCTTNNN

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGTGGCCGAACA-----
AACACCAAAACAAAGGA

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGCCGAACA
NGTAGGTTGGCATNNN-

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GGTGGCCGAACA-
GGGTGTGCCCAAAAGG

GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GGTGGCCGAACA
CGTGGGTGGTCC----

MA0130.1_ZNF354C/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GGTGGCCGAACA
-GTGGAT-----

MA0161.1_NFIC/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GGTGGCCGAACA
-TTGGCA-----

PB0141.1_Isgf3g_2/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GGTGGCCGAACA------
----GCAAAACATTACTA

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:GGTGGCCGAACA--
--------AACAAT

PB0173.1_Sox21_2/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GGTGGCCGAACA-------
--NNNNNGAACAATTGANN