Information for motif31


Reverse Opposite:

p-value:1e-8
log p-value:-1.958e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets105.0 +/- 64.6bp
Average Position of motif in Background167.9 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:AATAGACGTCAC
-----ACGTCA-

MA0018.2_CREB1/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:AATAGACGTCAC
---TGACGTCA-

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AATAGACGTCAC-
---TGACGTCATC

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AATAGACGTCAC--
--GTGACGTCACCG

PB0004.1_Atf1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AATAGACGTCAC---
NCGATGACGTCATCGN

MA0071.1_RORA_1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AATAGACGTCAC
-ATCAAGGTCA-

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AATAGACGTCAC--
--ATGACGTCATCN

PB0108.1_Atf1_2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AATAGACGTCAC--
NTTATTCGTCATNC

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AATAGACGTCAC--
--ATGACGTCATCN

PB0038.1_Jundm2_1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AATAGACGTCAC---
CCGATGACGTCATCGT