Information for motif33


Reverse Opposite:

p-value:1e-8
log p-value:-1.893e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets115.4 +/- 52.3bp
Average Position of motif in Background108.0 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0029.1_Mecom/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---ACAAGATAGG-
AAGATAAGATAACA

MA0037.2_GATA3/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ACAAGATAGG-
---AGATAAGA

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ACAAGATAGG-
---AGATAASR

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACAAGATAGG--
--NAGATAAGNN

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACAAGATAGG--
--CAGATAAGGN

PB0023.1_Gata6_1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACAAGATAGG-----
TATAGAGATAAGAATTG

MA0035.3_Gata1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACAAGATAGG--
-ANAGATAAGAA

MA0482.1_Gata4/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACAAGATAGG-
NNGAGATAAGA

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACAAGATAGG-
-NBWGATAAGR

MA0095.2_YY1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACAAGATAGG---
-CAAGATGGCGGC