Information for motif42


Reverse Opposite:

p-value:1e-5
log p-value:-1.233e+01
Information Content per bp:1.530
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif13.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets93.9 +/- 49.9bp
Average Position of motif in Background96.0 +/- 50.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTCTTCTACC
-GCTTCC---

MA0081.1_SPIB/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTCTTCTACC
TTCCTCT---

MA0111.1_Spz1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTCTTCTACC--
-GCTGTTACCCT

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTCTTCTACC------
ACATGCTACCTAATAC

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TTCTTCTACC------
ACTTGCTACCTACACC

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TTCTTCTACC
CACTTCCTCT---

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------TTCTTCTACC
AANTTATTGTTCTNNA

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------TTCTTCTACC
NNTTTATTGTTCTNNN

MA0080.3_Spi1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TTCTTCTACC-
NCACTTCCTCTTTTN

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TTCTTCTACC------
TNNTGCTACTGTNNNN