Information for motif43


Reverse Opposite:

p-value:1e-5
log p-value:-1.226e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets103.6 +/- 23.6bp
Average Position of motif in Background105.6 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TATCATTGAA---
NANTTCATTGAATTA

PB0197.1_Zfp105_2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TATCATTGAA----
NAAANTTATTGAANCAN

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TATCATTGAA----
ACTATGAATGAATGAT

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TATCATTGAA--
AATATTAATAAAGA

MA0070.1_PBX1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TATCATTGAA-
CCATCAATCAAA

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TATCATTGAA
AAGATATCCTT---

PB0068.1_Sox1_1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TATCATTGAA------
NNNTATTGAATTGNNN

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TATCATTGAA----
NNANTGATTGATNNNN

MF0010.1_Homeobox_class/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TATCATTGAA
AATTATT---

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------TATCATTGAA
AATAGGGTATCATATAT