Information for motif5


Reverse Opposite:

p-value:1e-14
log p-value:-3.270e+01
Information Content per bp:1.859
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets88.9 +/- 46.2bp
Average Position of motif in Background98.0 +/- 48.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CAAAATCTATCT-----
NNNCTGATATCTCNNNN

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAAAATCTATCT-
-GYCATCMATCAT

MA0038.1_Gfi1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAAAATCTATCT
-CAAATCACTG-

PH0044.1_Homez/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAAAATCTATCT---
NNTAAAAACGATGTTNT

PB0144.1_Lef1_2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAAAATCTATCT----
GAAGATCAATCACTTA

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CAAAATCTATCT
----YSTTATCT

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAAAATCTATCT-
--AAGGATATNTN

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAAAATCTATCT----
GAAGATCAATCACTAA

MA0037.2_GATA3/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CAAAATCTATCT
----TCTTATCT

PB0176.1_Sox5_2/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CAAAATCTATCT
TATCATAATTAAGGA