| p-value: | 1e-14 |
| log p-value: | -3.226e+01 |
| Information Content per bp: | 1.882 |
| Number of Target Sequences with motif | 9.0 |
| Percentage of Target Sequences with motif | 0.29% |
| Number of Background Sequences with motif | 1.9 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 105.4 +/- 57.1bp |
| Average Position of motif in Background | 117.4 +/- 59.7bp |
| Strand Bias (log2 ratio + to - strand density) | 0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
MA0072.1_RORA_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.66
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GACCTACATTGG
TTGACCTANTTATN |
|
|
|
MA0071.1_RORA_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.62
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GACCTACATTGG
TGACCTTGAT--- |
|
|
|
MA0143.3_Sox2/Jaspar
| Match Rank: | 3 |
| Score: | 0.56
| | Offset: | 4
| | Orientation: | reverse strand |
| Alignment: | GACCTACATTGG
----AACAAAGG |
|
|
|
MA0032.1_FOXC1/Jaspar
| Match Rank: | 4 |
| Score: | 0.55
| | Offset: | 4
| | Orientation: | reverse strand |
| Alignment: | GACCTACATTGG
----TACTNNNN |
|
|
|
PB0132.1_Hbp1_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.55
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GACCTACATTGG-----
NNTNNACAATGGGANNN |
|
|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 6 |
| Score: | 0.54
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GACCTACATTGG
TGACCT------- |
|
|
|
MA0442.1_SOX10/Jaspar
| Match Rank: | 7 |
| Score: | 0.54
| | Offset: | 5
| | Orientation: | reverse strand |
| Alignment: | GACCTACATTGG
-----ACAAAG- |
|
|
|
MA0077.1_SOX9/Jaspar
| Match Rank: | 8 |
| Score: | 0.53
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | GACCTACATTGG
---GAACAATGG |
|
|
|
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
| Match Rank: | 9 |
| Score: | 0.53
| | Offset: | 4
| | Orientation: | reverse strand |
| Alignment: | GACCTACATTGG
----RACAAWGG |
|
|
|
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 10 |
| Score: | 0.52
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | GACCTACATTGG-
---GAACAATGGN |
|
|
|
