Information for motif7


Reverse Opposite:

p-value:1e-14
log p-value:-3.226e+01
Information Content per bp:1.892
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.2 +/- 47.4bp
Average Position of motif in Background137.0 +/- 48.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GCCGTGGGAAGT
--CSTGGGAAAD

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCCGTGGGAAGT
--GGCGGGAARN

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GCCGTGGGAAGT
------NGAAGC

PB0124.1_Gabpa_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCGTGGGAAGT---
NNNNGGGGGAAGANGG

MA0470.1_E2F4/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCCGTGGGAAGT
-GGGCGGGAAGG

PB0058.1_Sfpi1_1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCGTGGGAAGT--
TTAAGAGGAAGTTA

MA0471.1_E2F6/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCCGTGGGAAGT
-GGGCGGGAAGG

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCGTGGGAAGT
CWGGCGGGAA--

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCCGTGGGAAGT-
---AGAGGAAGTG

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCCGTGGGAAGT-
---ACAGGAAGTG