Information for motif9


Reverse Opposite:

p-value:1e-13
log p-value:-3.022e+01
Information Content per bp:1.651
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif264.4
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets105.6 +/- 58.3bp
Average Position of motif in Background106.1 +/- 54.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GAAATCGAGT----
NNTAAAAACGATGTTNT

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GAAATCGAGT--
AAGGCGAAATCATCGCA

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GAAATCGAGT
ACTGAAACCA---

Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAAATCGAGT-
-TAATCAATTA

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GAAATCGAGT
NACAGGAAAT-----

MA0156.1_FEV/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAAATCGAGT
CAGGAAAT-----

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAAATCGAGT-----
TTGACCGAGAATTCC

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAAATCGAGT--
GAAACTGAAACT

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAAATCGAGT-
-DGATCRATAN

MA0051.1_IRF2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAAATCGAGT-------
GGAAAGCGAAACCAAAAC