Information for motif13


Reverse Opposite:

p-value:1e-33
log p-value:-7.680e+01
Information Content per bp:1.693
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets118.4 +/- 50.4bp
Average Position of motif in Background158.8 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0092.1_Lhx2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAAACTATCTAG-----
TAAACTAATTAGTGAAC

PH0044.1_Homez/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AAAACTATCTAG-
NNTAAAAACGATGTTNT

PH0094.1_Lhx4/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAAACTATCTAG----
CAAAGCTAATTAGNTTN

PH0040.1_Hmbox1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAAACTATCTAG-----
GANGTTAACTAGTTTNN

PH0155.1_Prrx2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAAACTATCTAG-----
AAAGCTAATTAGCGAAA

PH0031.1_Evx1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAAACTATCTAG-----
AGAACTAATTAGTGGAC

PH0034.1_Gbx2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAAACTATCTAG-----
AGCGCTAATTAGCGATT

PH0028.1_En1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAAACTATCTAG---
GCGAACTAATTAATGC

PH0108.1_Msx3/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAAACTATCTAG---
CAAAACCAATTAATTT

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAAACTATCTAG--
TAGAANVTTCTAGAA