| p-value: | 1e-30 |
| log p-value: | -7.041e+01 |
| Information Content per bp: | 1.861 |
| Number of Target Sequences with motif | 31.0 |
| Percentage of Target Sequences with motif | 0.18% |
| Number of Background Sequences with motif | 1.0 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 90.5 +/- 55.8bp |
| Average Position of motif in Background | 119.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | -1.1 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 1 |
| Score: | 0.68
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | AAGTGTCACACT
AGGTGHCAGACA |
|
|
|
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer
| Match Rank: | 2 |
| Score: | 0.68
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | AAGTGTCACACT
AGGTGTGAAM-- |
|
|
|
MA0100.2_Myb/Jaspar
| Match Rank: | 3 |
| Score: | 0.66
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --AAGTGTCACACT
CCAACTGCCA---- |
|
|
|
MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar
| Match Rank: | 4 |
| Score: | 0.64
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | AAGTGTCACACT-
AGGTGNCAGACAG |
|
|
|
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer
| Match Rank: | 5 |
| Score: | 0.64
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | AAGTGTCACACT
AGGTGTCA---- |
|
|
|
MA0498.1_Meis1/Jaspar
| Match Rank: | 6 |
| Score: | 0.62
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | AAGTGTCACACT---
AGCTGTCACTCACCT |
|
|
|
PB0013.1_Eomes_1/Jaspar
| Match Rank: | 7 |
| Score: | 0.62
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | AAGTGTCACACT-----
NNTTTTCACACCTTNNN |
|
|
|
PH0169.1_Tgif1/Jaspar
| Match Rank: | 8 |
| Score: | 0.60
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----AAGTGTCACACT-
NNNCAGCTGTCAATATN |
|
|
|
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer
| Match Rank: | 9 |
| Score: | 0.58
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --AAGTGTCACACT
CCAACTGCCA---- |
|
|
|
PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 10 |
| Score: | 0.58
| | Offset: | 4
| | Orientation: | forward strand |
| Alignment: | AAGTGTCACACT------
----GTCACGCTCNCTGA |
|
|
|
