Information for motif2


Reverse Opposite:

p-value:1e-44
log p-value:-1.035e+02
Information Content per bp:1.790
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets108.9 +/- 52.6bp
Average Position of motif in Background87.8 +/- 48.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TTCGTTTCAG-
-TGGTTTCAGT

T1ISRE(IRF)/Ifnb-Exp/Homer

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TTCGTTTCAG
ACTTTCGTTTCT-

PB0037.1_Isgf3g_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TTCGTTTCAG
TNAGTTTCGATTTTN

PB0036.1_Irf6_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTCGTTTCAG----
NNNTTGGTTTCGNTNNN

PB0033.1_Irf3_1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTCGTTTCAG
CAGTTTCGNTTCTN

PB0035.1_Irf5_1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTCGTTTCAG-----
NTGGTTTCGGTTNNN

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTCGTTTCAG
GTTTCACTTCCG

PB0022.1_Gata5_1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTCGTTTCAG----
NTNTTCTTATCAGTNTN

PB0034.1_Irf4_1/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TTCGTTTCAG
TNTGGTTTCGATACN-

MA0514.1_Sox3/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTCGTTTCAG
CCTTTGTTTT--